View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10150_low_19 (Length: 238)
Name: NF10150_low_19
Description: NF10150
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10150_low_19 |
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Alignment Details
Target: chr8 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 10558683 - 10558905
Alignment:
| Q |
1 |
tctagatttcaagctcggtattttagatttnnnnnnnntaaaatttactttgaaatttggactgtccgaccagatgtggctgcctgcgtgcagtaatagt |
100 |
Q |
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| T |
10558683 |
tctagatttcaagctcggtattttagattttaaaaaaataaaatttactttgaaatttggactgtccgaccagatgtggttgcctgcgtgcagtaatagt |
10558782 |
T |
|
| Q |
101 |
gtacaccatcccaatactaaatgaaaatcttatcaaattaagacatatatgtgtgtagaatttgtataaaaggcatcttaattcaacgtatttaacaggc |
200 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
10558783 |
gtacacaatcccaatactaaatgaaaatcttatcaaattaagacatatatgtgtgtagaatttgtataaaaggcatcttaattcaaggtatttaacaggc |
10558882 |
T |
|
| Q |
201 |
agctcaaattccaataagagatg |
223 |
Q |
| |
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||||||||||||||||||||||| |
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| T |
10558883 |
agctcaaattccaataagagatg |
10558905 |
T |
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