View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10151A_high_26 (Length: 316)
Name: NF10151A_high_26
Description: NF10151A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10151A_high_26 |
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Alignment Details
Target: chr7 (Bit Score: 284; Significance: 1e-159; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 7 - 301
Target Start/End: Original strand, 8156580 - 8156877
Alignment:
| Q |
7 |
ggatgtgtttactgtgcttttttaatggaagaggccttctatatactaatgaatcctatcatatatggctacaaacaaattattgataaaatcagtggtt |
106 |
Q |
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| T |
8156580 |
ggatgtgtttactgtgcttttttaatggaagaggccttctatatactaatgaatcctatcatatatggctacaaacaaattattgataaaatcagtggtt |
8156679 |
T |
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| Q |
107 |
caaatgaactaatatagaaaaaagagttatattctttcattctttattaacttggtacaattatttaaa---tgtagatacatgatctccacaatagtaa |
203 |
Q |
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| T |
8156680 |
caaatgaactaatatagaaaaaagagttatattctttcattctttattaacttggtacaattatttaaatgttgtagatacatgatctccacaatagtaa |
8156779 |
T |
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| Q |
204 |
ttgggtttgcatacaaccttcttcaaatggcactttcaattttcaccgtggtctcaggaaatcgtgtattaagtggtgatggaggctatatgtttgat |
301 |
Q |
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| T |
8156780 |
ttgggtttgcatacaaccttcttcaaatggcactttcaattttcaccgtggtctcaggaaatcgtgtattaagtggtgatggaggctatatgtttgat |
8156877 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 174 - 301
Target Start/End: Original strand, 8163088 - 8163215
Alignment:
| Q |
174 |
aatgtagatacatgatctccacaatagtaattgggtttgcatacaaccttcttcaaatggcactttcaattttcaccgtggtctcaggaaatcgtgtatt |
273 |
Q |
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| T |
8163088 |
aatgtagatacatgctctcgacaatagtcattgggtttgcatacaattgcctacaaatggcactttcaattttcagtgtggtatcaggaaatcgtgtatt |
8163187 |
T |
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| Q |
274 |
aagtggtgatggaggctatatgtttgat |
301 |
Q |
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| T |
8163188 |
aaatggtggcgcaggctataagtttgat |
8163215 |
T |
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