View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10151A_high_9 (Length: 438)
Name: NF10151A_high_9
Description: NF10151A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10151A_high_9 |
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Alignment Details
Target: chr3 (Bit Score: 365; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 365; E-Value: 0
Query Start/End: Original strand, 11 - 434
Target Start/End: Original strand, 32350644 - 32351084
Alignment:
| Q |
11 |
gatgaactggttcaatgatacgggttgggtttgttttggtctatggatttttgttgcagattttgcaattcgtgataattcttgtcgcacagattcaaag |
110 |
Q |
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| T |
32350644 |
gatgaactggttcaatgatacgggttgggtttgttttggtctatggatttttgttgcagattttgcaattcgtgataattcttgtcgcacagattcaaag |
32350743 |
T |
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| Q |
111 |
gattttgccatgaaaataaacaaaagacaagat-------------gaaactggtttgttgttatctaagacagatattatcaaacatgtaggatgcaac |
197 |
Q |
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| T |
32350744 |
gattttgccatgaaaataaacaaaagacaagatgaaatgagtagatgaaactggtttgttgttatctaagacagatattatcaaacatgtaggatgcaac |
32350843 |
T |
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| Q |
198 |
tagatatattttgttacaattcgaggtgtatttcgcaagaacacattgttttttgtttgacaaggtaacacatatcgagctcgggcctagttgaaaattt |
297 |
Q |
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| T |
32350844 |
tagatatattttgttacaattcgaggtgtatttcgcaagaacacattgttttttgtttgacaaggta--acatatcgagctcgggcctagttgaaaattt |
32350941 |
T |
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| Q |
298 |
atgagaatggattggaggacctt------gtggacatggtttggttcacgaggaaaaccaaaccaaattgaaccggattcttttcaaaactcataataat |
391 |
Q |
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| T |
32350942 |
atgagaatggattggaggaccttgctagggtggacatggtttggttcacgaggaaaaccaaaccaaattgaaccggattcttttcaaaactcataataat |
32351041 |
T |
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| Q |
392 |
tgaaatgaaccctttgcattttaatccggaccaaattgctatt |
434 |
Q |
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| T |
32351042 |
tgaaatgaaccctttgcattttaatccggaccaaattgctatt |
32351084 |
T |
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