View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10151A_low_10 (Length: 454)
Name: NF10151A_low_10
Description: NF10151A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10151A_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 338; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 338; E-Value: 0
Query Start/End: Original strand, 16 - 434
Target Start/End: Complemental strand, 2341011 - 2340590
Alignment:
| Q |
16 |
tggacatcattgatcaattggttcaaaattgcgataagagttacgctgcaaaccttaatattgtgcaaaa-tacagaagaatgtgactaatgtggagaca |
114 |
Q |
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|||| |||||||||||| ||||||||||||||||| ||||||| ||||||||||||| ||||| | |||| ||||||||||||||||||||||||||||| |
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| T |
2341011 |
tggatatcattgatcaaatggttcaaaattgcgattagagttatgctgcaaaccttattattgcggaaaaatacagaagaatgtgactaatgtggagaca |
2340912 |
T |
|
| Q |
115 |
attgcagttacaaacttacaatggcattgtagagacctctaaaatatttatatattgatcacaattatagttgcagatatttgaagttatgttgnnnnnn |
214 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2340911 |
attgcagttacaaacttacaatggcattatagagacctctaaaatatttatatattgatcacaattatagttgcagatatttgaagttatgttgtttttt |
2340812 |
T |
|
| Q |
215 |
naagggtcaaaatgagaagcaagaaaattaggaataatacaataaaacttcattttttactacgacaaaattcatttattattagaaatgctaagggttc |
314 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
2340811 |
taagggtcaaaatgagaagcaagaaaattacgaataatacaataaaacttcattttttattacgacaaaattcatttattattagaaatgctaagggttc |
2340712 |
T |
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| Q |
315 |
accctcgaaaaattcatttatcaattttaaatagagagaatcctaactcatattaaac--acactataataataactttatttttctattaattagtttt |
412 |
Q |
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||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
2340711 |
accctcgaaaaattcatttatcaatttgaaatagagagaatcctaactcatattaaacacacactataataataactttatttttctattaattagtttt |
2340612 |
T |
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| Q |
413 |
tggatttgtttatgttgtaggt |
434 |
Q |
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|||||||||||||||||||||| |
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| T |
2340611 |
tggatttgtttatgttgtaggt |
2340590 |
T |
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