View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10151A_low_107 (Length: 285)

Name: NF10151A_low_107
Description: NF10151A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10151A_low_107
NF10151A_low_107
[»] chr3 (20 HSPs)
chr3 (22-204)||(6785255-6785437)
chr3 (28-198)||(6797877-6798045)
chr3 (205-284)||(44269650-44269729)
chr3 (205-280)||(11258592-11258667)
chr3 (205-284)||(35065432-35065511)
chr3 (205-280)||(2842304-2842379)
chr3 (205-284)||(19884375-19884454)
chr3 (205-284)||(35353720-35353799)
chr3 (205-278)||(40811913-40811986)
chr3 (205-278)||(17519726-17519799)
chr3 (205-278)||(17534588-17534661)
chr3 (231-284)||(1208848-1208901)
chr3 (231-284)||(11258560-11258613)
chr3 (205-244)||(5215026-5215065)
chr3 (205-244)||(14508012-14508051)
chr3 (250-284)||(50756254-50756288)
chr3 (155-198)||(6940587-6940630)
chr3 (233-284)||(50351983-50352034)
chr3 (155-196)||(6774544-6774585)
chr3 (251-284)||(22842513-22842546)
[»] scaffold1662 (1 HSPs)
scaffold1662 (205-284)||(273-352)
[»] chr7 (7 HSPs)
chr7 (205-284)||(20585477-20585556)
chr7 (204-284)||(44374067-44374147)
chr7 (204-284)||(44382932-44383012)
chr7 (205-284)||(12466112-12466191)
chr7 (205-284)||(19282213-19282292)
chr7 (205-278)||(46386939-46387012)
chr7 (250-284)||(43747595-43747629)
[»] chr4 (7 HSPs)
chr4 (205-284)||(11425075-11425154)
chr4 (205-284)||(37018719-37018798)
chr4 (205-284)||(25090774-25090853)
chr4 (205-280)||(42874924-42874999)
chr4 (205-283)||(16997649-16997727)
chr4 (250-284)||(25512660-25512694)
chr4 (250-284)||(26922555-26922589)
[»] chr2 (5 HSPs)
chr2 (205-284)||(23969475-23969554)
chr2 (205-284)||(28653354-28653433)
chr2 (205-284)||(36839295-36839374)
chr2 (205-284)||(17306608-17306687)
chr2 (205-283)||(24515308-24515386)
[»] chr1 (7 HSPs)
chr1 (205-284)||(19675872-19675951)
chr1 (205-284)||(21046901-21046980)
chr1 (205-284)||(42912171-42912250)
chr1 (205-284)||(16059166-16059245)
chr1 (205-284)||(4596697-4596776)
chr1 (250-284)||(6833382-6833416)
chr1 (250-284)||(45496142-45496176)
[»] chr8 (10 HSPs)
chr8 (204-284)||(20179372-20179452)
chr8 (235-284)||(42818780-42818829)
chr8 (205-244)||(24713329-24713368)
chr8 (250-284)||(22344202-22344236)
chr8 (250-284)||(22355862-22355896)
chr8 (250-284)||(36304877-36304911)
chr8 (250-284)||(38988466-38988500)
chr8 (250-284)||(39019563-39019597)
chr8 (231-280)||(12577009-12577058)
chr8 (247-284)||(12577033-12577070)
[»] scaffold0146 (1 HSPs)
scaffold0146 (205-284)||(23517-23596)
[»] chr6 (6 HSPs)
chr6 (205-284)||(7825767-7825846)
chr6 (205-284)||(27126329-27126408)
chr6 (205-277)||(15891555-15891627)
chr6 (205-244)||(31733869-31733908)
chr6 (231-284)||(25920781-25920834)
chr6 (250-284)||(30674292-30674326)
[»] scaffold0111 (2 HSPs)
scaffold0111 (205-284)||(13386-13465)
scaffold0111 (205-284)||(19653-19732)
[»] scaffold1817 (1 HSPs)
scaffold1817 (205-284)||(249-327)
[»] scaffold0112 (1 HSPs)
scaffold0112 (228-284)||(1970-2026)
[»] chr5 (3 HSPs)
chr5 (205-272)||(19920767-19920834)
chr5 (250-284)||(22110893-22110927)
chr5 (250-282)||(8504636-8504668)
[»] scaffold0125 (1 HSPs)
scaffold0125 (231-284)||(27435-27488)
[»] scaffold0285 (1 HSPs)
scaffold0285 (232-284)||(18843-18894)
[»] scaffold0737 (1 HSPs)
scaffold0737 (205-244)||(5565-5604)
[»] scaffold0100 (1 HSPs)
scaffold0100 (250-284)||(10066-10100)
[»] scaffold0174 (2 HSPs)
scaffold0174 (251-284)||(4210-4243)
scaffold0174 (251-284)||(10332-10365)


Alignment Details
Target: chr3 (Bit Score: 183; Significance: 5e-99; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 22 - 204
Target Start/End: Complemental strand, 6785437 - 6785255
Alignment:
Q  22 atggacacatactatgtttgaaagcaaaactcaacaacatgagaatgtctggttcatattctgggttagaatgtgaaggatcaattccctagtttccttc 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6785437 atggacacatactatgtttgaaagcaaaactcaacaacatgagaatgtctggttcatattctgggttagaatgtgaaggatcaattccctagtttccttc 6785338  T
Q  122 agttcttgatgcaaagttatctcgatggttttcattattatgccattcaactgcatttttcaaagtaaaatatatttatatga 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6785337 agttcttgatgcaaagttatctcgatggttttcattattatgccattcaactgcatttttcaaagtaaaatatatttatatga 6785255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 28 - 198
Target Start/End: Complemental strand, 6798045 - 6797877
Alignment:
Q  28 acatactatgtttgaaagcaaaactcaacaacatgagaatgtctggttcatattctgggttagaatgtgaaggatcaattccctagtttccttcagttct 127  Q
    |||||||||||||||||| ||||||||    ||| || ||||| | |||||||||||  ||||||||| ||||||||| | ||||| | ||||| |||||    
T  6798045 acatactatgtttgaaagtaaaactcattggcataagcatgtcagcttcatattctgcattagaatgtaaaggatcaactacctagatcccttcggttct 6797946  T
Q  128 tgatgcaaagttatctcgatggttttcattattatgccattcaactgcatttttcaaagtaaaatatattt 198  Q
    ||||||  |  | |||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||    
T  6797945 tgatgccga--tgtctcgatggttttcataattatgcgattcaactgaatttttcaaagtaaaatatattt 6797877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 205 - 284
Target Start/End: Complemental strand, 44269729 - 44269650
Alignment:
Q  205 attatgttgcatatgttggtcaagttgttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    |||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||    
T  44269729 attaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaatgtcgttaaagttgtaagttgttgtcgatg 44269650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 205 - 280
Target Start/End: Complemental strand, 11258667 - 11258592
Alignment:
Q  205 attatgttgcatatgttggtcaagttgttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttgtc 280  Q
    |||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||    
T  11258667 attaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaatgtcgttaaagttgtaagttgttgtc 11258592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 205 - 284
Target Start/End: Original strand, 35065432 - 35065511
Alignment:
Q  205 attatgttgcatatgttggtcaagttgttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    |||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||| || ||||||||||||||||    
T  35065432 attaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaatgtcgttaaagttataagttgttgtcgatg 35065511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 205 - 280
Target Start/End: Original strand, 2842304 - 2842379
Alignment:
Q  205 attatgttgcatatgttggtcaagttgttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttgtc 280  Q
    |||| ||||||||||||||||||||||||||||||||||||  ||||| ||||||||||| |||||||||||||||    
T  2842304 attaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtccatgtcgttaaagttgtaagttgttgtc 2842379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 205 - 284
Target Start/End: Original strand, 19884375 - 19884454
Alignment:
Q  205 attatgttgcatatgttggtcaagttgttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    |||| ||||||||||||||||||||||||||||||||||||  ||||||||||||| ||| || ||||||||||||||||    
T  19884375 attaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaatgtcgtcaaagttttaagttgttgtcgatg 19884454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 205 - 284
Target Start/End: Complemental strand, 35353799 - 35353720
Alignment:
Q  205 attatgttgcatatgttggtcaagttgttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    |||| |||| |||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||| ||||||    
T  35353799 attaagttgtatatgttggtcaagttgttaaagttgtaagttgttgtcaatgtcgttaaagttgtaagttgttatcgatg 35353720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 205 - 278
Target Start/End: Complemental strand, 40811986 - 40811913
Alignment:
Q  205 attatgttgcatatgttggtcaagttgttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttg 278  Q
    |||| |||| |||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||| |||||    
T  40811986 attaagttgtatatgttggtcaagttgttaaagttgtaagttgttgtcaatgtcgttaaagttgtaagatgttg 40811913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 278
Target Start/End: Original strand, 17519726 - 17519799
Alignment:
Q  205 attatgttgcatatgttggtcaagttgttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttg 278  Q
    |||| ||||||||||||||| ||||||||||||||||||||  || |||||||||||||| ||||||| |||||    
T  17519726 attaagttgcatatgttggtgaagttgttaaagttgtaagttgttttcaatgtcgttaaagttgtaagatgttg 17519799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 278
Target Start/End: Original strand, 17534588 - 17534661
Alignment:
Q  205 attatgttgcatatgttggtcaagttgttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttg 278  Q
    |||| ||||||||||||||| ||||||||||||||||||||  || |||||||||||||| ||||||| |||||    
T  17534588 attaagttgcatatgttggtgaagttgttaaagttgtaagttgttttcaatgtcgttaaagttgtaagatgttg 17534661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 284
Target Start/End: Original strand, 1208848 - 1208901
Alignment:
Q  231 gttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    |||||||||||||||   |||||||||||||||| |||||||||||||||||||    
T  1208848 gttaaagttgtaagttggtgtcaatgtcgttaaagttgtaagttgttgtcgatg 1208901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 231 - 284
Target Start/End: Complemental strand, 11258613 - 11258560
Alignment:
Q  231 gttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    |||||||||||||||  ||||||||||||||||| ||||||||||||| |||||    
T  11258613 gttaaagttgtaagttgttgtcaatgtcgttaaagttgtaagttgttgacgatg 11258560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 244
Target Start/End: Complemental strand, 5215065 - 5215026
Alignment:
Q  205 attatgttgcatatgttggtcaagttgttaaagttgtaag 244  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  5215065 attaagttgcatatgttggtcaagttgttaaagttgtaag 5215026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 244
Target Start/End: Complemental strand, 14508051 - 14508012
Alignment:
Q  205 attatgttgcatatgttggtcaagttgttaaagttgtaag 244  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  14508051 attaagttgcatatgttggtcaagttgttaaagttgtaag 14508012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 284
Target Start/End: Original strand, 50756254 - 50756288
Alignment:
Q  250 gtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    |||||||||||||||||||||||||||||||||||    
T  50756254 gtcaatgtcgttaaatttgtaagttgttgtcgatg 50756288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 198
Target Start/End: Original strand, 6940587 - 6940630
Alignment:
Q  155 attattatgccattcaactgcatttttcaaagtaaaatatattt 198  Q
    ||||||||||||| || |||||||||||||||||||||| ||||    
T  6940587 attattatgccatccagctgcatttttcaaagtaaaataaattt 6940630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 284
Target Start/End: Original strand, 50351983 - 50352034
Alignment:
Q  233 taaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    ||||||| |||||  ||||| ||||||||||| |||||||||||||||||||    
T  50351983 taaagttataagttgttgtccatgtcgttaaagttgtaagttgttgtcgatg 50352034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 196
Target Start/End: Complemental strand, 6774585 - 6774544
Alignment:
Q  155 attattatgccattcaactgcatttttcaaagtaaaatatat 196  Q
    ||||||||||||| || | |||||||||||||||||||||||    
T  6774585 attattatgccatccagcggcatttttcaaagtaaaatatat 6774544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 284
Target Start/End: Original strand, 22842513 - 22842546
Alignment:
Q  251 tcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    |||||||||||||| |||||||||||||||||||    
T  22842513 tcaatgtcgttaaagttgtaagttgttgtcgatg 22842546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1662 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold1662
Description:

Target: scaffold1662; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 205 - 284
Target Start/End: Original strand, 273 - 352
Alignment:
Q  205 attatgttgcatatgttggtcaagttgttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    |||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||    
T  273 attaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaatgtcgttaaagttgtaagttgttgtcgatg 352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 5e-28; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 205 - 284
Target Start/End: Complemental strand, 20585556 - 20585477
Alignment:
Q  205 attatgttgcatatgttggtcaagttgttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    |||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||    
T  20585556 attaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaatgtcgttaaagttgtaagttgttgtcgatg 20585477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 204 - 284
Target Start/End: Complemental strand, 44374147 - 44374067
Alignment:
Q  204 aattatgttgcatatgttggtcaagttgttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    ||||| ||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||||||||    
T  44374147 aattaagttgcatatgttggtcaagttgttaaagttgtaggttgttgtcaatgtcgttaaagttgtaagttgttgtcgatg 44374067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 204 - 284
Target Start/End: Complemental strand, 44383012 - 44382932
Alignment:
Q  204 aattatgttgcatatgttggtcaagttgttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    ||||| ||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||||||||    
T  44383012 aattaagttgcatatgttggtcaagttgttaaagttgtaggttgttgtcaatgtcgttaaagttgtaagttgttgtcgatg 44382932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 205 - 284
Target Start/End: Original strand, 12466112 - 12466191
Alignment:
Q  205 attatgttgcatatgttggtcaagttgttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    |||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||| |||||||||||||||    
T  12466112 attaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaatgtcgttaaagttgcaagttgttgtcgatg 12466191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 205 - 284
Target Start/End: Complemental strand, 19282292 - 19282213
Alignment:
Q  205 attatgttgcatatgttggtcaagttgttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    |||| |||||||||||| |||||||||||||| ||||||||  ||||||||||||||||| |||||||||||||||||||    
T  19282292 attaagttgcatatgtttgtcaagttgttaaaattgtaagttgttgtcaatgtcgttaaagttgtaagttgttgtcgatg 19282213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 205 - 278
Target Start/End: Original strand, 46386939 - 46387012
Alignment:
Q  205 attatgttgcatatgttggtcaagttgttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttg 278  Q
    |||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||| |||||    
T  46386939 attaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaatgtcgttaaagttgtaagatgttg 46387012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 284
Target Start/End: Complemental strand, 43747629 - 43747595
Alignment:
Q  250 gtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    ||||||||||||||| |||||||||||||||||||    
T  43747629 gtcaatgtcgttaaagttgtaagttgttgtcgatg 43747595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 5e-28; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 205 - 284
Target Start/End: Complemental strand, 11425154 - 11425075
Alignment:
Q  205 attatgttgcatatgttggtcaagttgttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    |||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||    
T  11425154 attaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaatgtcgttaaagttgtaagttgttgtcgatg 11425075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 205 - 284
Target Start/End: Complemental strand, 37018798 - 37018719
Alignment:
Q  205 attatgttgcatatgttggtcaagttgttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    |||| |||||||||||||||| |||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||    
T  37018798 attaagttgcatatgttggtccagttgttaaagttgtaagttgttgtcaatgtcgttaaagttgtaagttgttgtcgatg 37018719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 205 - 284
Target Start/End: Complemental strand, 25090853 - 25090774
Alignment:
Q  205 attatgttgcatatgttggtcaagttgttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    |||| ||||||||||||||||||||||||||||||||||||  |||||| |||| ||||| |||||||||||||||||||    
T  25090853 attaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcattgtcattaaagttgtaagttgttgtcgatg 25090774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 205 - 280
Target Start/End: Complemental strand, 42874999 - 42874924
Alignment:
Q  205 attatgttgcatatgttggtcaagttgttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttgtc 280  Q
    |||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||| ||||    
T  42874999 attaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaatgtcgttaaagttgtaagttggtgtc 42874924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 283
Target Start/End: Complemental strand, 16997727 - 16997649
Alignment:
Q  205 attatgttgcatatgttggtcaagttgttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttgtcgat 283  Q
    |||| |||||| |||||||||||||||||||||||||||||  ||||||||||| ||||| ||||||||||||||||||    
T  16997727 attaagttgcacatgttggtcaagttgttaaagttgtaagttgttgtcaatgtcattaaagttgtaagttgttgtcgat 16997649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 284
Target Start/End: Complemental strand, 25512694 - 25512660
Alignment:
Q  250 gtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    ||||||||||||||| |||||||||||||||||||    
T  25512694 gtcaatgtcgttaaagttgtaagttgttgtcgatg 25512660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 284
Target Start/End: Original strand, 26922555 - 26922589
Alignment:
Q  250 gtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    ||||||||||||||| |||||||||||||||||||    
T  26922555 gtcaatgtcgttaaagttgtaagttgttgtcgatg 26922589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 5e-28; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 205 - 284
Target Start/End: Original strand, 23969475 - 23969554
Alignment:
Q  205 attatgttgcatatgttggtcaagttgttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    |||| ||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  23969475 attaagttgcatatgttggtaaagttgttaaagttgtaagttgttgtcaatgtcgttaaatttgtaagttgttgtcgatg 23969554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 205 - 284
Target Start/End: Original strand, 28653354 - 28653433
Alignment:
Q  205 attatgttgcatatgttggtcaagttgttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    |||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||    
T  28653354 attaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaatgtcgttaaagttgtaagttgttgtcgatg 28653433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 205 - 284
Target Start/End: Complemental strand, 36839374 - 36839295
Alignment:
Q  205 attatgttgcatatgttggtcaagttgttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    |||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||    
T  36839374 attaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaatgtcgttaaagttgtaagttgttgtcgatg 36839295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 205 - 284
Target Start/End: Complemental strand, 17306687 - 17306608
Alignment:
Q  205 attatgttgcatatgttggtcaagttgttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    |||| ||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||||||||    
T  17306687 attaagttgcatatgttggtcaagttgttaaagttgtatgttgttgtcaatgtcgttaaagttgtaagttgttgtcgatg 17306608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 205 - 283
Target Start/End: Complemental strand, 24515386 - 24515308
Alignment:
Q  205 attatgttgcatatgttggtcaagttgttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttgtcgat 283  Q
    |||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||| ||||||||||||||    
T  24515386 attaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaatgtcgttaaagttgcaagttgttgtcgat 24515308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 5e-28; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 205 - 284
Target Start/End: Complemental strand, 19675951 - 19675872
Alignment:
Q  205 attatgttgcatatgttggtcaagttgttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    |||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||    
T  19675951 attaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaatgtcgttaaagttgtaagttgttgtcgatg 19675872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 205 - 284
Target Start/End: Original strand, 21046901 - 21046980
Alignment:
Q  205 attatgttgcatatgttggtcaagttgttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    |||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||    
T  21046901 attaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaatgtcgttaaagttgtaagttgttgtcgatg 21046980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 205 - 284
Target Start/End: Complemental strand, 42912250 - 42912171
Alignment:
Q  205 attatgttgcatatgttggtcaagttgttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    |||| ||||||||||||||||||||||||||||||||||||  ||||||||||| ||||| |||||||||||||||||||    
T  42912250 attaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaatgtcattaaagttgtaagttgttgtcgatg 42912171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 205 - 284
Target Start/End: Original strand, 16059166 - 16059245
Alignment:
Q  205 attatgttgcatatgttggtcaagttgttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    |||| ||||||||||||||||||||||||||||||||||||  |||||||||| |||||| |||||||||||| ||||||    
T  16059166 attaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaatgtagttaaagttgtaagttgttatcgatg 16059245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 205 - 284
Target Start/End: Original strand, 4596697 - 4596776
Alignment:
Q  205 attatgttgcatatgttggtcaagttgttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    |||| ||||||||||||| || |||||||||||||||||||  |||||||| |||||||| |||||||||||||||||||    
T  4596697 attaagttgcatatgttgatcgagttgttaaagttgtaagttgttgtcaatttcgttaaagttgtaagttgttgtcgatg 4596776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 284
Target Start/End: Complemental strand, 6833416 - 6833382
Alignment:
Q  250 gtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    ||||||||||||||| |||||||||||||||||||    
T  6833416 gtcaatgtcgttaaagttgtaagttgttgtcgatg 6833382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 284
Target Start/End: Complemental strand, 45496176 - 45496142
Alignment:
Q  250 gtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    ||||||||||||||| |||||||||||||||||||    
T  45496176 gtcaatgtcgttaaagttgtaagttgttgtcgatg 45496142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 3e-26; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 204 - 284
Target Start/End: Original strand, 20179372 - 20179452
Alignment:
Q  204 aattatgttgcatatgttggtcaagttgttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    ||||| ||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||||||||    
T  20179372 aattaagttgcatatgttggtcaagttgttaaagttgtaggttgttgtcaatgtcgttaaagttgtaagttgttgtcgatg 20179452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 42818780 - 42818829
Alignment:
Q  235 aagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    |||||||||||  ||||||||||||||||| |||||||||||||||||||    
T  42818780 aagttgtaagttgttgtcaatgtcgttaaagttgtaagttgttgtcgatg 42818829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 205 - 244
Target Start/End: Complemental strand, 24713368 - 24713329
Alignment:
Q  205 attatgttgcatatgttggtcaagttgttaaagttgtaag 244  Q
    |||| |||||||||||||||||||||||| ||||||||||    
T  24713368 attaagttgcatatgttggtcaagttgtttaagttgtaag 24713329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 284
Target Start/End: Complemental strand, 22344236 - 22344202
Alignment:
Q  250 gtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    ||||||||||||||| |||||||||||||||||||    
T  22344236 gtcaatgtcgttaaagttgtaagttgttgtcgatg 22344202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 284
Target Start/End: Complemental strand, 22355896 - 22355862
Alignment:
Q  250 gtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    ||||||||||||||| |||||||||||||||||||    
T  22355896 gtcaatgtcgttaaagttgtaagttgttgtcgatg 22355862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 284
Target Start/End: Complemental strand, 36304911 - 36304877
Alignment:
Q  250 gtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    ||||||||||||||| |||||||||||||||||||    
T  36304911 gtcaatgtcgttaaagttgtaagttgttgtcgatg 36304877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 284
Target Start/End: Complemental strand, 38988500 - 38988466
Alignment:
Q  250 gtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    ||||||||||||||| |||||||||||||||||||    
T  38988500 gtcaatgtcgttaaagttgtaagttgttgtcgatg 38988466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 284
Target Start/End: Complemental strand, 39019597 - 39019563
Alignment:
Q  250 gtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    ||||||||||||||| |||||||||||||||||||    
T  39019597 gtcaatgtcgttaaagttgtaagttgttgtcgatg 39019563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 280
Target Start/End: Complemental strand, 12577058 - 12577009
Alignment:
Q  231 gttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttgtc 280  Q
    |||||||||||||||  ||||| |||||| |||| |||||||||||||||    
T  12577058 gttaaagttgtaagttgttgtcgatgtcgataaagttgtaagttgttgtc 12577009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 284
Target Start/End: Complemental strand, 12577070 - 12577033
Alignment:
Q  247 tttgtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    |||||| ||||||||||| |||||||||||||||||||    
T  12577070 tttgtccatgtcgttaaagttgtaagttgttgtcgatg 12577033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 205 - 284
Target Start/End: Complemental strand, 23596 - 23517
Alignment:
Q  205 attatgttgcatatgttggtcaagttgttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    |||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||| || ||||||||||||||||    
T  23596 attaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaatgtcgttaaagttttaagttgttgtcgatg 23517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 1e-25; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 205 - 284
Target Start/End: Complemental strand, 7825846 - 7825767
Alignment:
Q  205 attatgttgcatatgttggtcaagttgttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    |||| ||||||||||||||||||||||||||||||||||||  |||||||||| |||||| |||||||||||||||||||    
T  7825846 attaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaatgttgttaaagttgtaagttgttgtcgatg 7825767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 205 - 284
Target Start/End: Original strand, 27126329 - 27126408
Alignment:
Q  205 attatgttgcatatgttggtcaagttgttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    |||| ||||||||||||||||||||||||||||||||||||  ||||||||||| ||||| |||||||||||||||||||    
T  27126329 attaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaatgtctttaaagttgtaagttgttgtcgatg 27126408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 205 - 277
Target Start/End: Original strand, 15891555 - 15891627
Alignment:
Q  205 attatgttgcatatgttggtcaagttgttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgtt 277  Q
    |||| ||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||    
T  15891555 attaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaatgtcgttaaagttgtaagttgtt 15891627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 244
Target Start/End: Complemental strand, 31733908 - 31733869
Alignment:
Q  205 attatgttgcatatgttggtcaagttgttaaagttgtaag 244  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  31733908 attaagttgcatatgttggtcaagttgttaaagttgtaag 31733869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 231 - 284
Target Start/End: Complemental strand, 25920834 - 25920781
Alignment:
Q  231 gttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    ||||||||| |||||  | ||||||||||||||| |||||||||||||||||||    
T  25920834 gttaaagttataagttgtggtcaatgtcgttaaagttgtaagttgttgtcgatg 25920781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 284
Target Start/End: Original strand, 30674292 - 30674326
Alignment:
Q  250 gtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    ||||||||||||||| |||||||||||||||||||    
T  30674292 gtcaatgtcgttaaagttgtaagttgttgtcgatg 30674326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 56; Significance: 3e-23; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 205 - 284
Target Start/End: Original strand, 13386 - 13465
Alignment:
Q  205 attatgttgcatatgttggtcaagttgttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    |||| ||||||||||||||||||||||||||||||||||||  ||||||||||| |||||  ||||||||||||||||||    
T  13386 attaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaatgtcattaaagctgtaagttgttgtcgatg 13465  T

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Target: scaffold0111; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 205 - 284
Target Start/End: Original strand, 19653 - 19732
Alignment:
Q  205 attatgttgcatatgttggtcaagttgttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    |||| ||||||||||||||||||||||||||||||||||||  ||||||||||| |||||  ||||||||||||||||||    
T  19653 attaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaatgtcattaaagctgtaagttgttgtcgatg 19732  T

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Target: scaffold1817 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold1817
Description:

Target: scaffold1817; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 205 - 284
Target Start/End: Original strand, 249 - 327
Alignment:
Q  205 attatgttgcatatgttggtcaagttgttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    |||| ||||||||||||||||| ||| ||||||||||||||  |||||||||| |||||| || ||||||||||||||||    
T  249 attaagttgcatatgttggtcatgtt-ttaaagttgtaagttgttgtcaatgtagttaaagttttaagttgttgtcgatg 327  T

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Target: scaffold0112 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 228 - 284
Target Start/End: Complemental strand, 2026 - 1970
Alignment:
Q  228 gttgttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    ||||||||||||||||||  | ||||||||||||||| |||||||||||||||||||    
T  2026 gttgttaaagttgtaagttgtcgtcaatgtcgttaaagttgtaagttgttgtcgatg 1970  T

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Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 205 - 272
Target Start/End: Complemental strand, 19920834 - 19920767
Alignment:
Q  205 attatgttgcatatgttggtcaagttgttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaag 272  Q
    |||| ||||||||||||||||||||||||||||||||||||  |||||||| | ||| || |||||||    
T  19920834 attaagttgcatatgttggtcaagttgttaaagttgtaagttgttgtcaatattgtttaagttgtaag 19920767  T

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Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 284
Target Start/End: Complemental strand, 22110927 - 22110893
Alignment:
Q  250 gtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    ||||||||||||||| |||||||||||||||||||    
T  22110927 gtcaatgtcgttaaagttgtaagttgttgtcgatg 22110893  T

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Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 250 - 282
Target Start/End: Original strand, 8504636 - 8504668
Alignment:
Q  250 gtcaatgtcgttaaatttgtaagttgttgtcga 282  Q
    ||||||||||||||| |||||||||||||||||    
T  8504636 gtcaatgtcgttaaagttgtaagttgttgtcga 8504668  T

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Target: scaffold0125 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 231 - 284
Target Start/End: Complemental strand, 27488 - 27435
Alignment:
Q  231 gttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    |||||||||||||||  |||||||||| |||||| |||||||||||| ||||||    
T  27488 gttaaagttgtaagttgttgtcaatgtagttaaagttgtaagttgttatcgatg 27435  T

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Target: scaffold0285 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 284
Target Start/End: Complemental strand, 18894 - 18843
Alignment:
Q  232 ttaaagttgtaagtgtttgtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    ||||||||||||||  || |||||||||||||| |||||||||||||||||||    
T  18894 ttaaagttgtaagttgttatcaatgtcgttaaa-ttgtaagttgttgtcgatg 18843  T

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Target: scaffold0737 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 205 - 244
Target Start/End: Original strand, 5565 - 5604
Alignment:
Q  205 attatgttgcatatgttggtcaagttgttaaagttgtaag 244  Q
    |||| |||||||||||||||||||||||| ||||||||||    
T  5565 attaagttgcatatgttggtcaagttgtttaagttgtaag 5604  T

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Target: scaffold0100 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 250 - 284
Target Start/End: Original strand, 10066 - 10100
Alignment:
Q  250 gtcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    ||||||||||||||| |||||||||||||||||||    
T  10066 gtcaatgtcgttaaagttgtaagttgttgtcgatg 10100  T

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Target: scaffold0174 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 284
Target Start/End: Complemental strand, 4243 - 4210
Alignment:
Q  251 tcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    |||||||||||||| |||||||||||||||||||    
T  4243 tcaatgtcgttaaagttgtaagttgttgtcgatg 4210  T

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Target: scaffold0174; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 284
Target Start/End: Complemental strand, 10365 - 10332
Alignment:
Q  251 tcaatgtcgttaaatttgtaagttgttgtcgatg 284  Q
    |||||||||||||| |||||||||||||||||||    
T  10365 tcaatgtcgttaaagttgtaagttgttgtcgatg 10332  T

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