View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10151A_low_12 (Length: 448)
Name: NF10151A_low_12
Description: NF10151A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10151A_low_12 |
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Alignment Details
Target: chr7 (Bit Score: 396; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 396; E-Value: 0
Query Start/End: Original strand, 7 - 430
Target Start/End: Complemental strand, 44826937 - 44826515
Alignment:
| Q |
7 |
acaatgagatggacatcaaagtcaaggtcgatgtcaagaaagagcaaatctaagaagttcaaatattcttcaaaatcttgtggacttccatccaaatgga |
106 |
Q |
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| T |
44826937 |
acaatgagatgc-catcaaagtcaaggtcgatgtcaagaaagagcaaatctaagaagttcaaatattcttcaaaatcttgtggacttccatccaaatgga |
44826839 |
T |
|
| Q |
107 |
aaagaagaagaaataccgatgagaaaaacaaactggaaaagcactatacaccttgtgaatgtgagggggcgtgtggaaagcaatgtacatgtcgtcttaa |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
44826838 |
aaagaagaagaaataccgatgagaaaaacaaactggaaaagcactatacaccttgtgaatgtgagggggcgtgtggaaagcaatgtccatgtcgtcttaa |
44826739 |
T |
|
| Q |
207 |
tggttattgctgtgaaaaatattgtgggtatgtcaattttcatttaattatgttacttttcgatggaaaacaactatgttttcaatgtgatcagttatat |
306 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44826738 |
tggtttttgctgtgaaaaatattgtgggtatgtcaattttcatttaattatgttacttttcgatggaaaacaactatgttttcaatgtgatcagttatat |
44826639 |
T |
|
| Q |
307 |
tttctaccttcaggtgttcaaagctctgtaaaaatctatttggaggatgtcagtgtactaagagtcagtgtagaagtcgacactgtccatgttttgcagc |
406 |
Q |
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||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44826638 |
tttttaccttcaggtgttcaaagctctgtaaaaatcgatttggaggatgtcagtgtactaagagtcagtgtagaagtcgacactgtccatgttttgcagc |
44826539 |
T |
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| Q |
407 |
ttcaagagattgtgaccctgatgt |
430 |
Q |
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| T |
44826538 |
ttcaagagattgtgaccctgatgt |
44826515 |
T |
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