View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10151A_low_174 (Length: 248)
Name: NF10151A_low_174
Description: NF10151A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10151A_low_174 |
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Alignment Details
Target: chr1 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 24 - 235
Target Start/End: Complemental strand, 2290302 - 2290089
Alignment:
| Q |
24 |
agctctttctagaagttctaatgtataacttctaatccactatggttttggtggtttccaaacatagagtcagtttgatgatttgttgtaaattttaata |
123 |
Q |
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| T |
2290302 |
agctctttctagaagttctaatgtataacttctaatccactatggttttggtggtttccaaacatagagtcagtttgatgatttgttgtaaattttaata |
2290203 |
T |
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| Q |
124 |
gtaaattttgcatttgatacattgaaaactaaaatacttaacttttttaataaaatannnnnnnnc--tgtgtacttgaagtaagcacaataagaatact |
221 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||| |
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| T |
2290202 |
gtaaattttgcatttgatacattgaaaactaaaatacttaacttttttaataaaatattttttttctttgtgtacttgaagtaagcataataagaatact |
2290103 |
T |
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| Q |
222 |
tagctcgagaataa |
235 |
Q |
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|||||||||||||| |
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| T |
2290102 |
tagctcgagaataa |
2290089 |
T |
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