View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10151A_low_177 (Length: 247)
Name: NF10151A_low_177
Description: NF10151A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10151A_low_177 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 18 - 247
Target Start/End: Complemental strand, 36506637 - 36506409
Alignment:
| Q |
18 |
accttgatcatagatttgttgaaagacaattcctactccacaaaaagagaattctactactcagacaaggaattatttgagtacaagcaggtaaaatgtc |
117 |
Q |
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| T |
36506637 |
accttgatcatatatttgttgaaagacaattcctactccacaaaaagagaattctactactcagacaaggaattatttgagtacaagcaggtaaaatatc |
36506538 |
T |
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| Q |
118 |
aattaattccatttttctcttgcatgtttccatttcttgttatcaaattgaagtgtgtgtccataagtgtgctgctgtttggtttttggtgttttttgtt |
217 |
Q |
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| T |
36506537 |
aattaattccatttttctcttgcatgtttccatttcttgttatc-aattgaagtgtgtgtccataagtgtgctgctgtttggtttttgctgttttttgtt |
36506439 |
T |
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| Q |
218 |
cttagcttctcagattttgctagttagcgt |
247 |
Q |
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||||||||||||||||||||||||| |||| |
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| T |
36506438 |
cttagcttctcagattttgctagttggcgt |
36506409 |
T |
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