View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10151A_low_18 (Length: 427)

Name: NF10151A_low_18
Description: NF10151A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10151A_low_18
NF10151A_low_18
[»] chr2 (27 HSPs)
chr2 (47-424)||(16443176-16443554)
chr2 (265-404)||(26195434-26195573)
chr2 (266-387)||(25232105-25232227)
chr2 (255-387)||(25225789-25225922)
chr2 (69-248)||(13494996-13495176)
chr2 (138-413)||(23453509-23453789)
chr2 (239-404)||(19084560-19084729)
chr2 (286-404)||(11312222-11312339)
chr2 (336-402)||(17830674-17830740)
chr2 (56-150)||(19089406-19089497)
chr2 (309-404)||(44117301-44117399)
chr2 (254-404)||(18557456-18557604)
chr2 (47-127)||(17319660-17319740)
chr2 (64-131)||(26538905-26538973)
chr2 (56-122)||(5836227-5836293)
chr2 (56-113)||(24053447-24053503)
chr2 (56-109)||(25445221-25445273)
chr2 (47-122)||(636216-636291)
chr2 (47-122)||(22430282-22430357)
chr2 (47-122)||(22435876-22435951)
chr2 (47-122)||(43776925-43777000)
chr2 (53-102)||(11311989-11312037)
chr2 (56-113)||(19437696-19437752)
chr2 (69-125)||(19912219-19912275)
chr2 (344-404)||(7394664-7394724)
chr2 (47-122)||(7910113-7910188)
chr2 (47-122)||(14898717-14898792)
[»] chr4 (16 HSPs)
chr4 (56-308)||(13999940-14000192)
chr4 (114-308)||(13994694-13994888)
chr4 (258-404)||(12753605-12753752)
chr4 (305-404)||(20354990-20355087)
chr4 (56-113)||(23200470-23200526)
chr4 (265-376)||(20679210-20679319)
chr4 (254-357)||(24857816-24857919)
chr4 (56-113)||(30673858-30673914)
chr4 (47-122)||(20192742-20192817)
chr4 (69-130)||(12435487-12435549)
chr4 (69-130)||(29333593-29333655)
chr4 (69-130)||(42411063-42411125)
chr4 (56-113)||(12659350-12659406)
chr4 (56-113)||(16325877-16325933)
chr4 (265-404)||(8563638-8563777)
chr4 (340-404)||(17350005-17350069)
[»] chr3 (16 HSPs)
chr3 (114-308)||(13921525-13921719)
chr3 (265-404)||(20463053-20463192)
chr3 (254-405)||(10937379-10937530)
chr3 (285-362)||(3170085-3170161)
chr3 (285-362)||(19647423-19647500)
chr3 (53-126)||(44122175-44122247)
chr3 (56-113)||(49486883-49486939)
chr3 (47-122)||(13990766-13990841)
chr3 (47-122)||(23344310-23344385)
chr3 (47-122)||(40800788-40800863)
chr3 (56-122)||(2168801-2168867)
chr3 (56-122)||(9724773-9724839)
chr3 (56-122)||(12990873-12990939)
chr3 (56-113)||(21883368-21883424)
chr3 (69-113)||(2978394-2978438)
chr3 (255-318)||(13639700-13639764)
[»] chr8 (16 HSPs)
chr8 (114-266)||(30735218-30735370)
chr8 (265-404)||(23429689-23429828)
chr8 (313-404)||(28350494-28350585)
chr8 (304-404)||(22274875-22274974)
chr8 (254-405)||(12642364-12642514)
chr8 (255-404)||(29185462-29185612)
chr8 (56-123)||(17909690-17909757)
chr8 (56-123)||(10738912-10738979)
chr8 (56-122)||(23429477-23429543)
chr8 (69-130)||(21247632-21247694)
chr8 (69-130)||(27679765-27679827)
chr8 (69-130)||(37209668-37209730)
chr8 (47-122)||(12756312-12756387)
chr8 (305-357)||(28621881-28621933)
chr8 (69-113)||(30714374-30714418)
chr8 (69-113)||(30722151-30722195)
[»] chr7 (18 HSPs)
chr7 (265-404)||(20125321-20125460)
chr7 (294-407)||(42939916-42940028)
chr7 (294-381)||(42937616-42937702)
chr7 (285-362)||(23818659-23818736)
chr7 (47-122)||(558022-558097)
chr7 (336-404)||(7578715-7578783)
chr7 (183-303)||(17188404-17188524)
chr7 (56-122)||(25498997-25499063)
chr7 (56-113)||(8248054-8248110)
chr7 (47-122)||(32148411-32148486)
chr7 (294-362)||(34322491-34322559)
chr7 (56-113)||(340452-340508)
chr7 (69-151)||(20362606-20362686)
chr7 (69-113)||(29185482-29185526)
chr7 (239-302)||(34226055-34226119)
chr7 (239-302)||(34230183-34230247)
chr7 (286-406)||(35338891-35339011)
chr7 (47-122)||(42208827-42208902)
[»] chr6 (12 HSPs)
chr6 (265-404)||(25398220-25398359)
chr6 (122-405)||(17190636-17190918)
chr6 (217-404)||(21143036-21143224)
chr6 (265-368)||(17275056-17275160)
chr6 (255-371)||(19441097-19441215)
chr6 (270-368)||(17270121-17270220)
chr6 (56-125)||(17270335-17270404)
chr6 (294-352)||(25393930-25393988)
chr6 (52-122)||(19441316-19441386)
chr6 (47-122)||(14855871-14855946)
chr6 (69-130)||(23427438-23427500)
chr6 (53-101)||(25397856-25397903)
[»] chr1 (22 HSPs)
chr1 (255-405)||(27317701-27317851)
chr1 (114-292)||(11323684-11323859)
chr1 (114-292)||(11481705-11481880)
chr1 (265-398)||(15552973-15553106)
chr1 (306-406)||(5032472-5032571)
chr1 (285-378)||(18640451-18640544)
chr1 (53-123)||(26028630-26028700)
chr1 (254-334)||(3850391-3850471)
chr1 (285-404)||(18643142-18643261)
chr1 (56-113)||(31093106-31093162)
chr1 (57-113)||(11660122-11660177)
chr1 (47-122)||(27179120-27179195)
chr1 (56-122)||(33493087-33493153)
chr1 (53-122)||(145539-145608)
chr1 (69-130)||(28519231-28519293)
chr1 (69-122)||(29547696-29547750)
chr1 (265-345)||(145359-145439)
chr1 (354-387)||(18187034-18187067)
chr1 (56-113)||(18535138-18535194)
chr1 (56-113)||(37356892-37356948)
chr1 (209-292)||(14762264-14762348)
chr1 (72-127)||(16168721-16168777)
[»] chr5 (26 HSPs)
chr5 (254-404)||(25590052-25590202)
chr5 (286-404)||(28663554-28663672)
chr5 (265-404)||(17935611-17935751)
chr5 (294-404)||(29742060-29742169)
chr5 (310-405)||(29948339-29948434)
chr5 (265-345)||(18079940-18080020)
chr5 (305-382)||(35105178-35105251)
chr5 (56-123)||(17945692-17945759)
chr5 (56-112)||(34648091-34648146)
chr5 (255-324)||(24213295-24213365)
chr5 (56-113)||(16675508-16675564)
chr5 (367-404)||(18058274-18058311)
chr5 (56-113)||(21171346-21171402)
chr5 (56-113)||(35264699-35264755)
chr5 (56-123)||(19699287-19699354)
chr5 (336-404)||(21154189-21154257)
chr5 (336-404)||(21161324-21161392)
chr5 (47-122)||(28367131-28367206)
chr5 (271-333)||(40786726-40786789)
chr5 (265-318)||(24228294-24228348)
chr5 (56-113)||(23053538-23053594)
chr5 (239-330)||(17964345-17964437)
chr5 (56-108)||(18080116-18080167)
chr5 (57-113)||(24213475-24213530)
chr5 (69-113)||(25365553-25365597)
chr5 (255-334)||(31108995-31109074)
[»] scaffold0102 (1 HSPs)
scaffold0102 (54-113)||(13967-14025)
[»] scaffold0014 (1 HSPs)
scaffold0014 (56-113)||(111819-111875)
[»] scaffold0124 (1 HSPs)
scaffold0124 (47-122)||(39377-39451)
[»] scaffold0004 (1 HSPs)
scaffold0004 (47-122)||(345821-345896)
[»] scaffold0066 (1 HSPs)
scaffold0066 (52-122)||(11534-11604)


Alignment Details
Target: chr2 (Bit Score: 311; Significance: 1e-175; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 47 - 424
Target Start/End: Complemental strand, 16443554 - 16443176
Alignment:
Q  47 cccaccggatttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaataataatattagcatgatgtggatg 145  Q
    |||||||||||||||||||||||||||||||||| | |||||| |||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||    
T  16443554 cccaccggatttttctctagtaaaggttttaatgagacatatctttcatggacatccaagggggagtgttatgaataataatattagcatgatctggatg 16443455  T
Q  146 tccattgatcctaagctttctatattccctaacccccatgagtaaatggctttagtcattaccatttacatttagtcctataactcttcgtacacttgta 245  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  16443454 tccattgatcctaagctttctatattccctaactcccatgagtaaatggctttagtcattaccatttacatttagtcctatgactcttcatacacttgta 16443355  T
Q  246 acttacaatatttgtggcttataaataggacctatatgcaatgtaaaggacacacttatgaagtaatacaatatactctcttgttctccatttatccttt 345  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  16443354 acttacaatatttgtgtcttataaataggacctatatgcaatgtaaaatacacactcatgaagtaatacaatatactctcttgttctccatttatccttt 16443255  T
Q  346 tctctctacttttctatgttgtacaatatcttgcaatgctttggattaattttataacaaccttaatattcttcgacat 424  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || |||||    
T  16443254 tctctctacttttctatgttgtacaatatcttgcaatgctttggattaattttataacaaccttaacattttttgacat 16443176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 265 - 404
Target Start/End: Original strand, 26195434 - 26195573
Alignment:
Q  265 tataaataggacctatat-gcaatgtaaaggacacacttatgaagtaatacaatatactctcttgttctccatttatccttttctctctacttttctatg 363  Q
    |||||||||||||||||| |||||||||    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  26195434 tataaataggacctatattgcaatgtaatat-cacacttatgaagtaatacaatatactctcttgttctccctttatccttttctctatacttttctatg 26195532  T
Q  364 ttgtacaatatcttgcaatgctttggattaattttataaca 404  Q
    ||||||||||||||| |||| |||| |||||||| ||||||    
T  26195533 ttgtacaatatcttggaatgttttgtattaatttcataaca 26195573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 266 - 387
Target Start/End: Original strand, 25232105 - 25232227
Alignment:
Q  266 ataaataggacctatat-gcaatgtaaaggacacacttatgaagtaatacaatatactctcttgttctccatttatccttttctctctacttttctatgt 364  Q
    ||||||||||| ||||| | ||||||||| ||||||||  |||| ||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||    
T  25232105 ataaataggacatatattgtaatgtaaagaacacacttgagaagcaatacaatacactctcttgttctccctttatccttttctctctactcttctatgt 25232204  T
Q  365 tgtacaatatcttgcaatgcttt 387  Q
    |||||| ||||||||||||||||    
T  25232205 tgtacattatcttgcaatgcttt 25232227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 255 - 387
Target Start/End: Original strand, 25225789 - 25225922
Alignment:
Q  255 atttgtggcttataaataggacctatat-gcaatgtaaaggacacacttatgaagtaatacaatatactctcttgttctccatttatccttttctctcta 353  Q
    ||||||| | |||||||||||| | ||| | ||||||||| ||||| ||  |||| ||||||||| ||||| ||||||||| ||||||||||||||||||    
T  25225789 atttgtgtcctataaataggacatgtattgtaatgtaaagaacacagttgagaagcaatacaatacactcttttgttctccctttatccttttctctcta 25225888  T
Q  354 cttttctatgttgtacaatatcttgcaatgcttt 387  Q
    || ||||||||| |||| ||||||||||||||||    
T  25225889 ctcttctatgttatacattatcttgcaatgcttt 25225922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 69 - 248
Target Start/End: Original strand, 13494996 - 13495176
Alignment:
Q  69 aaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaataataatattagcatgatgtggatgtccattgatcc-taagctttct 166  Q
    ||||||||||||  |||||||||||||| ||||||||  |||||| |||||||||||| |||||  || || |||||||||||| |||| ||||||||||    
T  13494996 aaggttttaatgatgcatatccttcatgaacatctaaaagggagtattatgaataatattattaatataatatggatgtccatt-atccataagctttct 13495094  T
Q  167 atattccctaacccccatgagtaaatggctttagtcattaccatttacatttagtcctataactc-ttcgtacacttgtaact 248  Q
    ||||||| |||| || |||||| |||| ||||| |||||||  ||  ||||||||||||| | || ||| |||||||||||||    
T  13495095 atattccttaactcctatgagt-aatgactttactcattacatttggcatttagtcctatgagtctttcatacacttgtaact 13495176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 138 - 413
Target Start/End: Original strand, 23453509 - 23453789
Alignment:
Q  138 tgtggatgtccattgatcctaagctttctatattccctaacccccatgagtaaatggctttagtcattaccatttacatttagtcctataactcttcgta 237  Q
    |||| |||||||||  ||||| ||||||||||| || |||| |   ||||  |||| ||||| |||||   ||| |||||||| | ||| ||| ||| |     
T  23453509 tgtgaatgtccatttttcctaggctttctatatcccttaactcatttgagcgaatgactttattcattgttattgacatttagccttatgactattcatg 23453608  T
Q  238 cacttgtaacttacaatatttgtggcttataaataggacctatat-gcaatgtaaaggacacacttatgaagtaata----caatatactctcttgttct 332  Q
     |||||||| ||||||  ||| || | |||||||||||| ||||| || || ||||  ||||| ||| |||||||||    ||||||||  | |||||||    
T  23453609 tacttgtaagttacaaattttctgtcctataaataggacatatattgccatataaataacacatttaagaagtaatatatacaatatacatttttgttct 23453708  T
Q  333 ccatttatccttttctctctacttttctatgttgtacaatatcttgcaatgctttggattaattttataacaaccttaata 413  Q
    |  ||||| | ||||| |||||| ||||||||||||||||||||| |||| |||||||||||||| ||||||| |||||||    
T  23453709 ctttttatgcctttctatctactcttctatgttgtacaatatcttacaatactttggattaatttcataacaaacttaata 23453789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 239 - 404
Target Start/End: Original strand, 19084560 - 19084729
Alignment:
Q  239 acttgtaacttacaatatttgtggcttataaataggacctatat--gcaatgtaaaggacacacttatgaagtaatacaatatactctctt-gttctcca 335  Q
    ||||||||||||| | ||||||| | |||||||||||| |||||  ||  ||||||| ||||||||  |||| |||||| ||||||||||| ||||||      
T  19084560 acttgtaacttaccacatttgtgtcatataaataggacttatatttgct-tgtaaagaacacacttgagaagcaatacactatactctctttgttctctc 19084658  T
Q  336 tt--tatccttttctctctacttttctatgttgtacaatatcttgcaatgctttggattaattttataaca 404  Q
    ||  | |||  ||||| |||||||||||||||||||||||||||||||| |||| ||| ||||| ||||||    
T  19084659 ttgttctcccattctccctacttttctatgttgtacaatatcttgcaatacttttgatcaatttcataaca 19084729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 286 - 404
Target Start/End: Original strand, 11312222 - 11312339
Alignment:
Q  286 atgtaaaggacacacttatgaagtaatacaatatactctcttgttctccatttatccttttctctctacttttctatgttgtacaatatcttgcaatgct 385  Q
    |||||||| ||||||||    ||||||| |||||||||||||||||||  ||||||| ||| |||||||| |||||| ||||||||||||||  ||| ||    
T  11312222 atgtaaagaacacacttgaagagtaatataatatactctcttgttctctctttatcccttt-tctctactcttctatattgtacaatatcttataatact 11312320  T
Q  386 ttggattaattttataaca 404  Q
    |||||| ||||| ||||||    
T  11312321 ttggatcaatttcataaca 11312339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 336 - 402
Target Start/End: Complemental strand, 17830740 - 17830674
Alignment:
Q  336 tttatccttttctctctacttttctatgttgtacaatatcttgcaatgctttggattaattttataa 402  Q
    ||||||| |||||||||||| ||||||||||||||||||||| |||| |||| ||||||||||||||    
T  17830740 tttatccgtttctctctactcttctatgttgtacaatatcttacaatactttagattaattttataa 17830674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 56 - 150
Target Start/End: Original strand, 19089406 - 19089497
Alignment:
Q  56 tttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaataataatattagcatgatgtggatgtccat 150  Q
    |||||||||||||| |||||||||| |||||||| |||||||||||| ||| |||||| |||||||||||| ||||   |||||||||||||||||    
T  19089406 tttttctctagtaa-ggttttaatgaggcatatctttcatggacatccaagagggagtgttatgaataatattatt---atgatgtggatgtccat 19089497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 309 - 404
Target Start/End: Complemental strand, 44117399 - 44117301
Alignment:
Q  309 taatacaatatactctcttgttctccatttatccttttctctctacttttctatg---ttgtacaatatcttgcaatgctttggattaattttataaca 404  Q
    ||||| |||||||| |||| |||||| ||||||| |||||||||||| |||||||   ||||||||||||||||||  ||||| |||| ||| ||||||    
T  44117399 taataaaatatactatcttattctccctttatccatttctctctactcttctatgttgttgtacaatatcttgcaacactttgaattactttcataaca 44117301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 254 - 404
Target Start/End: Complemental strand, 18557604 - 18557456
Alignment:
Q  254 tatttgtggcttataaataggacctata-tgcaatgtaaaggacacacttatgaagtaatacaatatactctcttgttctccatttatccttttctctct 352  Q
    |||||||| | |||||||| |||||||| || ||||||||| |  |||||  |||||||||||  || |||| ||||||||  |||||||||| ||||||    
T  18557604 tatttgtgtcctataaatatgacctataatgtaatgtaaag-attcacttgagaagtaatacatcattctct-ttgttctctctttatccttt-ctctct 18557508  T
Q  353 acttttctatgttgtacaatatcttgcaatgctttggattaattttataaca 404  Q
    ||| |||||  |||||||||||||| |||| |||| ||||||||| ||||||    
T  18557507 actcttctacattgtacaatatcttacaatacttttgattaatttcataaca 18557456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 17319740 - 17319660
Alignment:
Q  47 cccaccggatttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaataataat 127  Q
    |||||||  ||||||||||| || |||||||||  ||||||||||| ||||||||| |||||||||| ||||||||||||||    
T  17319740 cccaccgagtttttctctagcaa-ggttttaattaggcatatccttgatggacatccaagggggagtgttatgaataataat 17319660  T

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Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 64 - 131
Target Start/End: Complemental strand, 26538973 - 26538905
Alignment:
Q  64 tagtaaaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaataataatatta 131  Q
    ||||||||||||||||| | ||||||||||||||||||| || ||| ||| |||||||||||| |||||    
T  26538973 tagtaaaggttttaatgagacatatccttcatggacatccaaagggaagtgttatgaataatattatta 26538905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 5836293 - 5836227
Alignment:
Q  56 tttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaata 122  Q
    |||||||||||||| |||||||||| ||||||||||  ||||||||| |||||||||| |||||||||    
T  5836293 tttttctctagtaa-ggttttaatgaggcatatcctcgatggacatccaagggggagtgttatgaata 5836227  T

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Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 24053503 - 24053447
Alignment:
Q  56 tttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt 113  Q
    |||||||||||||| |||||||||| |||||||| |  ||||||||||||||||||||    
T  24053503 tttttctctagtaa-ggttttaatgaggcatatcttcaatggacatctaagggggagt 24053447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 25445273 - 25445221
Alignment:
Q  56 tttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggg 109  Q
    |||||||||||||| |||||||||| ||||||||||  ||||||||||||||||    
T  25445273 tttttctctagtaa-ggttttaatgaggcatatcctcaatggacatctaagggg 25445221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 636216 - 636291
Alignment:
Q  47 cccaccggatttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaata 122  Q
    ||||| || |||||||||||||| |||||||||| |||||||||   ||||||||| |||||||||| |||||||||    
T  636216 cccactgggtttttctctagtaa-ggttttaatgaggcatatccgagatggacatccaagggggagtgttatgaata 636291  T

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Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 22430282 - 22430357
Alignment:
Q  47 cccaccggatttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaata 122  Q
    ||||| || |||||||||||||| |||||||||| |||||||||   ||||||||| |||||||||| |||||||||    
T  22430282 cccactgggtttttctctagtaa-ggttttaatgaggcatatccgagatggacatccaagggggagtgttatgaata 22430357  T

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Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 22435876 - 22435951
Alignment:
Q  47 cccaccggatttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaata 122  Q
    ||||| || |||||||||||||| |||||||||| |||||||||   ||||||||| |||||||||| |||||||||    
T  22435876 cccactgggtttttctctagtaa-ggttttaatgaggcatatccgagatggacatccaagggggagtgttatgaata 22435951  T

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Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 43776925 - 43777000
Alignment:
Q  47 cccaccggatttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaata 122  Q
    ||||| || |||||||||||||| |||||||||| |||||||||   ||||||||| |||||||||| |||||||||    
T  43776925 cccactgggtttttctctagtaa-ggttttaatgaggcatatccgagatggacatccaagggggagtgttatgaata 43777000  T

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Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 11311989 - 11312037
Alignment:
Q  53 ggatttttctctagtaaaggttttaatggggcatatccttcatggacatc 102  Q
    ||||||||||||||||| |||||||||| |||| ||||||| ||||||||    
T  11311989 ggatttttctctagtaa-ggttttaatgaggcacatccttcgtggacatc 11312037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 19437752 - 19437696
Alignment:
Q  56 tttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt 113  Q
    |||||||||||||| |||||||||| |||||||| |  ||||||||| ||||||||||    
T  19437752 tttttctctagtaa-ggttttaatgaggcatatcttcaatggacatccaagggggagt 19437696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 19912219 - 19912275
Alignment:
Q  69 aaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaataata 125  Q
    |||||||||||| ||||||||| | ||||||||| |||||||||| ||||||||||||    
T  19912219 aaggttttaatgaggcatatcc-taatggacatccaagggggagtgttatgaataata 19912275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 404
Target Start/End: Complemental strand, 7394724 - 7394664
Alignment:
Q  344 tttctctctacttttctatgttgtacaatatcttgcaatgctttggattaattttataaca 404  Q
    |||||||||| |||| |||  | || ||||||| |||||||||||||||||||| ||||||    
T  7394724 tttctctctatttttatatactttataatatctagcaatgctttggattaatttcataaca 7394664  T

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Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 7910188 - 7910113
Alignment:
Q  47 cccaccggatttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaata 122  Q
    ||||| || |||||||||||||| |||||||||| | |||||||   ||||||||| |||||||||| |||||||||    
T  7910188 cccactgggtttttctctagtaa-ggttttaatgagacatatccgagatggacatccaagggggagtgttatgaata 7910113  T

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Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 14898717 - 14898792
Alignment:
Q  47 cccaccggatttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaata 122  Q
    ||||| || |||||||||||||| |||||||||| ||||||| |   ||||||||| |||||||||| |||||||||    
T  14898717 cccactgggtttttctctagtaa-ggttttaatgaggcatattcgagatggacatccaagggggagtgttatgaata 14898792  T

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Target: chr4 (Bit Score: 166; Significance: 1e-88; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 56 - 308
Target Start/End: Original strand, 13999940 - 14000192
Alignment:
Q  56 tttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaataataatattagcatgatgtggatgtccattgat 154  Q
    |||||||||| |||||||||||||| |||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |    
T  13999940 tttttctctactaaaggttttaatgaggcatatccttcatagacatccaagggggagtgttatgaataataatattagcatgatgtggatgtccattgtt 14000039  T
Q  155 cctaagctttctatattccctaacccccatgagtaaatggctttagtcattaccatttacatttagtcctataactcttcgtacacttgtaacttacaat 254  Q
    |||||||||||||||| |||||||    ||||||||||||||||||||||||  |||||||||||||||||| ||||||| |||||||||||||||||||    
T  14000040 cctaagctttctatatgccctaacttatatgagtaaatggctttagtcattaatatttacatttagtcctatgactcttcatacacttgtaacttacaat 14000139  T
Q  255 atttgtggcttataaataggacctatatgcaatgtaaaggacacacttatgaag 308  Q
    |||| || ||||||||||||||||||||||||||| ||| |||||||| |||||    
T  14000140 atttatgtcttataaataggacctatatgcaatgt-aagtacacacttgtgaag 14000192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 114 - 308
Target Start/End: Original strand, 13994694 - 13994888
Alignment:
Q  114 ttatgaataataatattagcatgatgtggatgtccattgatcctaagctttctatattccctaacccccatgagtaaatggctttagtcattaccattta 213  Q
    ||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||  | |||||||||||||||||||||||||||||||    
T  13994694 ttatgaataataatattagcatgatgtcgatgtccattgtttctaagctttctatattccctaacttctatgagtaaatggctttagtcattaccattta 13994793  T
Q  214 catttagtcctataactcttcgtacacttgtaacttacaatatttgtggcttataaataggacctatatgcaatgtaaaggacacacttatgaag 308  Q
    ||||||||||||| ||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||||| |||||||| |||||    
T  13994794 catttagtcctatgactcttcgtacacttgtaacttaaaatgtttgtgtcttataaataggacctatatgcaatgtaaagtacacacttgtgaag 13994888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 258 - 404
Target Start/End: Complemental strand, 12753752 - 12753605
Alignment:
Q  258 tgtggcttataaataggacctatatg-caatgtaaaggacacacttatgaagta--atacaatatactctcttgttctccatttatccttttctctctac 354  Q
    |||| ||||||||||||||||| ||  |||||||| | |||||||| |||||||  |||||||||||||||| ||||||| ||||||| ||||||||||     
T  12753752 tgtgtcttataaataggacctacattacaatgtaatg-acacacttgtgaagtataatacaatatactctctggttctccctttatcc-tttctctctat 12753655  T
Q  355 ttttctatgttgtacaatatcttgcaatgctttggattaattttataaca 404  Q
    | || |||  | |||||||||| |||||||| ||||||||||| ||||||    
T  12753654 tcttatatactttacaatatctagcaatgctctggattaatttcataaca 12753605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 305 - 404
Target Start/End: Complemental strand, 20355087 - 20354990
Alignment:
Q  305 gaagtaatacaatatactctcttgttctccatttatccttttctctctacttttctatgttgtacaatatcttgcaatgctttggattaattttataaca 404  Q
    |||| ||||||||||||||| || |||||  |||||||||||||||  ||||||||||||  || ||||||||| ||| |||| ||||||||||||||||    
T  20355087 gaagcaatacaatatactcttttattctctctttatccttttctct--acttttctatgtcatataatatcttgtaatactttagattaattttataaca 20354990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 23200470 - 23200526
Alignment:
Q  56 tttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt 113  Q
    |||||||||||||| |||||||||| ||||||||||  ||||||||||||||||||||    
T  23200470 tttttctctagtaa-ggttttaatgaggcatatcctcaatggacatctaagggggagt 23200526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 376
Target Start/End: Complemental strand, 20679319 - 20679210
Alignment:
Q  265 tataaataggacctatatgcaatgtaaaggacacacttatgaagtaatacaatatactctcttgttctccatttatccttttctctctacttttctatgt 364  Q
    |||||||||||| |||||   |||||||| | ||||||  ||||||||| |||||||||| ||||| ||  |||||  |||| |||||||| ||||||||    
T  20679319 tataaataggacatatattgtatgtaaagaagacacttgagaagtaatataatatactcttttgttatctttttat--ttttttctctactattctatgt 20679222  T
Q  365 tgtacaatatct 376  Q
    |||||| |||||    
T  20679221 tgtacagtatct 20679210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 254 - 357
Target Start/End: Complemental strand, 24857919 - 24857816
Alignment:
Q  254 tatttgtggcttataaataggacctata-tgcaatgtaaaggacacacttatgaagtaatacaatatactctcttgttctccatttatccttttctctct 352  Q
    |||||||| | |||||||||||  |||| ||||||||||||   ||||||| ||||||||||||||||||||||| ||||   |||||| | ||||||||    
T  24857919 tatttgtgtcctataaataggatttataatgcaatgtaaagtt-acacttaagaagtaatacaatatactctcttattctgtttttatcttgttctctct 24857821  T
Q  353 acttt 357  Q
    |||||    
T  24857820 acttt 24857816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 30673914 - 30673858
Alignment:
Q  56 tttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt 113  Q
    |||||||||||||| |||||||||| ||||||||||  ||||||||| ||||||||||    
T  30673914 tttttctctagtaa-ggttttaatgaggcatatcctcaatggacatccaagggggagt 30673858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 20192817 - 20192742
Alignment:
Q  47 cccaccggatttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaata 122  Q
    ||||| || |||||||||||||| |||||||||| |||||||||   ||||||||| |||||||||| |||||||||    
T  20192817 cccactgggtttttctctagtaa-ggttttaatgaggcatatccgatatggacatccaagggggagtgttatgaata 20192742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 12435549 - 12435487
Alignment:
Q  69 aaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaataataatatt 130  Q
    |||||||||||| ||||||||||  ||||||||| |||||||||| |||| |||| |||||||    
T  12435549 aaggttttaatgaggcatatcctcgatggacatccaagggggagtgttataaatattaatatt 12435487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 29333593 - 29333655
Alignment:
Q  69 aaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaataataatatt 130  Q
    |||||||||||| ||||||||||  ||||||||| |||||||||| |||| |||| |||||||    
T  29333593 aaggttttaatgaggcatatcctcgatggacatccaagggggagtgttataaatattaatatt 29333655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 42411063 - 42411125
Alignment:
Q  69 aaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaataataatatt 130  Q
    |||||||||||| ||||||||||  ||||||||| |||||||||| |||| |||| |||||||    
T  42411063 aaggttttaatgaggcatatcctcgatggacatccaagggggagtgttataaatattaatatt 42411125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 12659406 - 12659350
Alignment:
Q  56 tttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt 113  Q
    |||||||||||||| |||||||||| |||||||| |  ||||||||| ||||||||||    
T  12659406 tttttctctagtaa-ggttttaatgaggcatatcttcaatggacatccaagggggagt 12659350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 16325933 - 16325877
Alignment:
Q  56 tttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt 113  Q
    |||||||||||||| |||||||||| |||||||| |  ||||||||| ||||||||||    
T  16325933 tttttctctagtaa-ggttttaatgaggcatatcttcaatggacatccaagggggagt 16325877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 265 - 404
Target Start/End: Complemental strand, 8563777 - 8563638
Alignment:
Q  265 tataaataggacctatatg-caatgtaaaggacacacttatgaagtaatacaatatactctcttgttctccatttatccttttctctctacttttctatg 363  Q
    ||||||||| ||||||||  |||||||| | |||||||||| |||||||| ||||| || |  | |||||  ||||| | ||||||| || | || |||     
T  8563777 tataaatagaacctatattacaatgtaatg-acacacttattaagtaataaaatatgctataatattctctctttattcctttctctgtattcttatata 8563679  T
Q  364 ttgtacaatatcttgcaatgctttggattaattttataaca 404  Q
    || |||||||||||||||| |||| ||| ||||| ||||||    
T  8563678 ttttacaatatcttgcaatactttagatcaatttcataaca 8563638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 404
Target Start/End: Original strand, 17350005 - 17350069
Alignment:
Q  340 tccttttctctctacttttctatgttgtacaatatcttgcaatgctttggattaattttataaca 404  Q
    |||||||||||||||| || |||  | |||||||||||||||| |||| ||| ||||| ||||||    
T  17350005 tccttttctctctactcttatatactttacaatatcttgcaatacttttgatcaatttcataaca 17350069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 135; Significance: 3e-70; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 114 - 308
Target Start/End: Original strand, 13921525 - 13921719
Alignment:
Q  114 ttatgaataataatattagcatgatgtggatgtccattgatcctaagctttctatattccctaacccccatgagtaaatggctttagtcattaccattta 213  Q
    |||||| |||||||||||||||| ||||||||||||||| |||||| |||||||||||||||||| || |||||||||||| ||||||||||||||||||    
T  13921525 ttatgagtaataatattagcatggtgtggatgtccattgttcctaaactttctatattccctaactcctatgagtaaatggatttagtcattaccattta 13921624  T
Q  214 catttagtcctataactcttcgtacacttgtaacttacaatatttgtggcttataaataggacctatatgcaatgtaaaggacacacttatgaag 308  Q
    ||||||||| ||| ||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||| |||||    
T  13921625 catttagtcatatgactcttcatacacttgaaacttacaatatttgtgtcttataaataggacctatatgcaatgtaaagtatacacttgtgaag 13921719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 265 - 404
Target Start/End: Complemental strand, 20463192 - 20463053
Alignment:
Q  265 tataaataggacctatat-gcaatgtaaaggacacacttatgaagtaatacaatatactctcttgttctccatttatccttttctctctacttttctatg 363  Q
    ||||||||| |||||||| | ||||||||| ||||||||  |||| ||||||  ||||||| ||||| ||  ||||||| |||| ||||||| |||||||    
T  20463192 tataaatagaacctatattgtaatgtaaagaacacacttgagaagcaatacatcatactcttttgttatctctttatccctttc-ctctactcttctatg 20463094  T
Q  364 ttgtacaatatcttgcaatgctttggattaattttataaca 404  Q
    ||||||||||| ||||||||||||  || ||||||||||||    
T  20463093 ttgtacaatattttgcaatgcttttcatcaattttataaca 20463053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 254 - 405
Target Start/End: Original strand, 10937379 - 10937530
Alignment:
Q  254 tatttgtggcttataaataggacctata-tgcaatgtaaaggacacacttatgaagtaatacaatatactctcttgttctccatttatccttttctctct 352  Q
    |||||||| | ||||||||||| ||||| ||||||||||| |||||| ||  |||| ||||||| ||||||| ||||| || |||||||| ||||||||     
T  10937379 tatttgtgtcctataaataggatctatattgcaatgtaaa-gacacatttgagaagcaatacaacatactcttttgttatctatttatccctttctctca 10937477  T
Q  353 acttttctatgttgtacaatatcttgcaatgctttggattaattttataacaa 405  Q
    ||| || || |||||| |||||||| ||||  ||| ||||||||| |||||||    
T  10937478 actcttttacgttgtaaaatatcttacaatattttagattaatttcataacaa 10937530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 285 - 362
Target Start/End: Complemental strand, 3170161 - 3170085
Alignment:
Q  285 aatgtaaaggacacacttatgaagtaatacaatatactctcttgttctccatttatccttttctctctacttttctat 362  Q
    ||||||||  |||||||| ||||||||| |||||||||||||| |||||| ||||||  |||||||||||| ||||||    
T  3170161 aatgtaaaaaacacactt-tgaagtaatgcaatatactctcttcttctccctttatctctttctctctactcttctat 3170085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 285 - 362
Target Start/End: Original strand, 19647423 - 19647500
Alignment:
Q  285 aatgtaaaggacacacttatgaagtaatacaatatactctcttgttctccatttatccttttctctctacttttctat 362  Q
    |||||||||||||||||| |||||||||   ||||||||| || |||||| ||||||  |||||||||||| ||||||    
T  19647423 aatgtaaaggacacacttgtgaagtaatgatatatactcttttcttctccctttatctctttctctctactcttctat 19647500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 44122247 - 44122175
Alignment:
Q  53 ggatttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaataataa 126  Q
    |||||||||| |||||| |||||||||| ||||||||| | ||||||||| |||||||||| |||||||||||||    
T  44122247 ggatttttctatagtaa-ggttttaatgaggcatatcc-tgatggacatccaagggggagtgttatgaataataa 44122175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 49486939 - 49486883
Alignment:
Q  56 tttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt 113  Q
    |||||||||||||| |||||||||| ||||||||||  ||||||||| ||||||||||    
T  49486939 tttttctctagtaa-ggttttaatgaggcatatcctcaatggacatccaagggggagt 49486883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 13990766 - 13990841
Alignment:
Q  47 cccaccggatttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaata 122  Q
    ||||| || |||||||||||||| |||||||||| |||||||||   ||||||||| |||||||||| |||||||||    
T  13990766 cccactgggtttttctctagtaa-ggttttaatgaggcatatccgagatggacatccaagggggagtgttatgaata 13990841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 23344310 - 23344385
Alignment:
Q  47 cccaccggatttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaata 122  Q
    ||||| || |||||||||||||| |||||||||| |||||||||   ||||||||| |||||||||| |||||||||    
T  23344310 cccactgggtttttctctagtaa-ggttttaatgaggcatatccgagatggacatccaagggggagtgttatgaata 23344385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 40800863 - 40800788
Alignment:
Q  47 cccaccggatttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaata 122  Q
    ||||| || |||||||||||||| |||||||||| |||||||||   ||||||||| |||||||||| |||||||||    
T  40800863 cccactgggtttttctctagtaa-ggttttaatgaggcatatccgagatggacatccaagggggagtgttatgaata 40800788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 2168867 - 2168801
Alignment:
Q  56 tttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaata 122  Q
    |||||||||||||| |||||||||| |||||||||   ||||||||| |||||||||| |||||||||    
T  2168867 tttttctctagtaa-ggttttaatgaggcatatccgatatggacatccaagggggagtgttatgaata 2168801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 9724839 - 9724773
Alignment:
Q  56 tttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaata 122  Q
    |||||||||||||| |||||||||| |||||||||   ||||||||| |||||||||| |||||||||    
T  9724839 tttttctctagtaa-ggttttaatgaggcatatccgagatggacatccaagggggagtgttatgaata 9724773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 122
Target Start/End: Original strand, 12990873 - 12990939
Alignment:
Q  56 tttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaata 122  Q
    |||||||||||||| ||||||||||  |||||||||| ||||||||| |||||| ||| |||||||||    
T  12990873 tttttctctagtaa-ggttttaatgaagcatatccttgatggacatccaaggggaagtgttatgaata 12990939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 21883368 - 21883424
Alignment:
Q  56 tttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt 113  Q
    |||||||||| ||| |||||||||| ||||||||||  ||||||||| ||||||||||    
T  21883368 tttttctctaataa-ggttttaatgaggcatatcctcaatggacatccaagggggagt 21883424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 2978438 - 2978394
Alignment:
Q  69 aaggttttaatggggcatatccttcatggacatctaagggggagt 113  Q
    |||||||||||| ||||||||||  ||||||||| ||||||||||    
T  2978438 aaggttttaatgaggcatatcctcgatggacatccaagggggagt 2978394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 255 - 318
Target Start/End: Original strand, 13639700 - 13639764
Alignment:
Q  255 atttgtggcttataaataggacctata-tgcaatgtaaaggacacacttatgaagtaatacaata 318  Q
    ||||||| |||||| |||||||||||| || ||||||||| |||||||| ||||  |||||||||    
T  13639700 atttgtgccttatacataggacctatattgtaatgtaaagaacacacttgtgaaacaatacaata 13639764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 121; Significance: 7e-62; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 114 - 266
Target Start/End: Complemental strand, 30735370 - 30735218
Alignment:
Q  114 ttatgaataataatattagcatgatgtggatgtccattgatcctaagctttctatattccctaacccccatgagtaaatggctttagtcattaccattta 213  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  30735370 ttatgaataataatattagcatgatgtggatgtccattgttcctaagctttctatattccctaactcctatgagtaaatggctttagtcattaccattta 30735271  T
Q  214 catttagtcctataactcttcgtacacttgtaacttacaatatttgtggctta 266  Q
     |||||||| ||| ||||||| |||||||||||||||||||||||||| ||||    
T  30735270 aatttagtcttatgactcttcatacacttgtaacttacaatatttgtgtctta 30735218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 265 - 404
Target Start/End: Original strand, 23429689 - 23429828
Alignment:
Q  265 tataaataggacctatatg-caatgtaaaggacacacttatgaagtaatacaatatactctcttgttctccatttatccttttctctctacttttctatg 363  Q
    ||||||||||||||| ||  |||||||| | |||||||| |||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||     
T  23429689 tataaataggacctacattacaatgtaatg-acacacttgtgaagtaaaacaatatactctcttgttctccctttatcctcttctctctacttttctata 23429787  T
Q  364 ttgtacaatatcttgcaatgctttggattaattttataaca 404  Q
    |||||||||||||||| ||||||||||||||||| ||||||    
T  23429788 ttgtacaatatcttgcgatgctttggattaatttcataaca 23429828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 313 - 404
Target Start/End: Complemental strand, 28350585 - 28350494
Alignment:
Q  313 acaatatactctcttgttctccatttatccttttctctctacttttctatgttgtacaatatcttgcaatgctttggattaattttataaca 404  Q
    |||||||||||| ||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  28350585 acaatatactctattgttctccctttatctttttctctctagttttctatgttgtacaatatcttgcaatactttggattaatttcataaca 28350494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 304 - 404
Target Start/End: Original strand, 22274875 - 22274974
Alignment:
Q  304 tgaagtaatacaatatactctcttgttctccatttatccttttctctctacttttctatgttgtacaatatcttgcaatgctttggattaattttataac 403  Q
    |||||||||||||||||||||| |||||||| ||||||| |||||||||| | || |||  | ||||||||||||||||||||||||||||||| |||||    
T  22274875 tgaagtaatacaatatactctcctgttctccctttatcc-tttctctctattcttatatactttacaatatcttgcaatgctttggattaatttcataac 22274973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 254 - 405
Target Start/End: Complemental strand, 12642514 - 12642364
Alignment:
Q  254 tatttgtggcttataaataggacctata-tgcaatgtaaaggacacacttatgaagtaatacaatatactctcttgttctccatttatccttttctctct 352  Q
    |||||||| | ||||||||||||||||| | || |||||| |  ||||||  |||||||  ||| || |||| ||||||||  |||||||  ||||||||    
T  12642514 tatttgtgtcctataaataggacctataattcattgtaaatgt-acacttgagaagtaacgcaacatgctct-ttgttctctctttatccccttctctct 12642417  T
Q  353 acttttctatgttgtacaatatcttgcaatgctttggattaattttataacaa 405  Q
    ||| || |||||||||||||||||||||||||||| ||||||||| |||||||    
T  12642416 actcttttatgttgtacaatatcttgcaatgcttttgattaatttcataacaa 12642364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 255 - 404
Target Start/End: Complemental strand, 29185612 - 29185462
Alignment:
Q  255 atttgtggcttataaataggacctatat-gcaatgtaaaggacacacttatgaagtaatacaatatactctcttgttctccatttatccttttctctcta 353  Q
    ||||||| | |||||||||||| ||||| | ||||||||  |||||||| ||||||||| |||||||||||| ||||||   ||||| | ||| ||||||    
T  29185612 atttgtgtcctataaataggacatatattgtaatgtaaaaaacacacttgtgaagtaatgcaatatactctcatgttctttctttattcctttttctcta 29185513  T
Q  354 cttttctatgttgtacaatatcttgcaatgctttggattaattttataaca 404  Q
     | || |||  | |||||||| |||||||  ||||||||||||| ||||||    
T  29185512 ttcttatatactttacaatatattgcaatattttggattaatttcataaca 29185462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 123
Target Start/End: Original strand, 17909690 - 17909757
Alignment:
Q  56 tttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaataa 123  Q
    |||||||||||||| |||||||||| |||| |||||||||||||||| |||| ||||| ||||||||||    
T  17909690 tttttctctagtaa-ggttttaatgaggcacatccttcatggacatccaaggaggagtgttatgaataa 17909757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 123
Target Start/End: Original strand, 10738912 - 10738979
Alignment:
Q  56 tttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaataa 123  Q
    |||||||||| ||| |||||||||| |||| |||||||||||||||  |||||||||| ||||||||||    
T  10738912 tttttctctaataa-ggttttaatgaggcacatccttcatggacattcaagggggagtgttatgaataa 10738979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 122
Target Start/End: Original strand, 23429477 - 23429543
Alignment:
Q  56 tttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaata 122  Q
    |||| ||||||||| |||||||||| || |||||||| ||||||||| |||||||||| |||||||||    
T  23429477 ttttactctagtaa-ggttttaatgagggatatccttgatggacatccaagggggagtgttatgaata 23429543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 21247632 - 21247694
Alignment:
Q  69 aaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaataataatatt 130  Q
    |||||||||||| ||||||||||  ||||||||| |||||||||| |||| |||| |||||||    
T  21247632 aaggttttaatgaggcatatcctcgatggacatccaagggggagtgttataaatattaatatt 21247694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 130
Target Start/End: Complemental strand, 27679827 - 27679765
Alignment:
Q  69 aaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaataataatatt 130  Q
    |||||||||||| ||||||||||  ||||||||| |||||||||| |||| |||| |||||||    
T  27679827 aaggttttaatgaggcatatcctcgatggacatccaagggggagtgttataaatattaatatt 27679765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 37209668 - 37209730
Alignment:
Q  69 aaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaataataatatt 130  Q
    |||||||||||| ||||||||||  ||||||||| |||||||||| |||| |||| |||||||    
T  37209668 aaggttttaatgaggcatatcctcgatggacatccaagggggagtgttataaatattaatatt 37209730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 12756387 - 12756312
Alignment:
Q  47 cccaccggatttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaata 122  Q
    ||||| || |||||||||||||| |||||||||| | |||||||   ||||||||| |||||||||| |||||||||    
T  12756387 cccactgggtttttctctagtaa-ggttttaatgagacatatccgagatggacatccaagggggagtgttatgaata 12756312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 305 - 357
Target Start/End: Original strand, 28621881 - 28621933
Alignment:
Q  305 gaagtaatacaatatactctcttgttctccatttatccttttctctctacttt 357  Q
    |||| ||| ||||||||||| || |||||| |||||| |||||||||||||||    
T  28621881 gaagcaatgcaatatactctattattctccctttatcattttctctctacttt 28621933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 30714418 - 30714374
Alignment:
Q  69 aaggttttaatggggcatatccttcatggacatctaagggggagt 113  Q
    |||||||||||| ||||||||||  ||||||||| ||||||||||    
T  30714418 aaggttttaatgaggcatatcctcaatggacatccaagggggagt 30714374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 30722195 - 30722151
Alignment:
Q  69 aaggttttaatggggcatatccttcatggacatctaagggggagt 113  Q
    |||||||||||| ||||||||||  ||||||||| ||||||||||    
T  30722195 aaggttttaatgaggcatatcctcaatggacatccaagggggagt 30722151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 101; Significance: 6e-50; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 265 - 404
Target Start/End: Original strand, 20125321 - 20125460
Alignment:
Q  265 tataaataggacctatat-gcaatgtaaaggacacacttatgaagtaatacaatatactctcttgttctccatttatccttttctctctacttttctatg 363  Q
    |||||||||||| ||||| ||||||||| | |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||    
T  20125321 tataaataggacatatattgcaatgtaatg-acacacttgtgaagtaatacaatataccctcttgttctccatttatccttttctctctaattttatatg 20125419  T
Q  364 ttgtacaatatcttgcaatgctttggattaattttataaca 404  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  20125420 ttgtacaatatcttgcaatgctttggattaattttataaca 20125460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 294 - 407
Target Start/End: Original strand, 42939916 - 42940028
Alignment:
Q  294 gacacacttatgaagtaatacaatatactctcttgttctccatttatccttttctctctacttttctatgttgtacaatatcttgcaatgctttggatta 393  Q
    ||||||||| |||||||||||||||||| |||||||||||| ||||||| |||||||||| | || |||  | |||||||||||||||||||||||||||    
T  42939916 gacacacttgtgaagtaatacaatataccctcttgttctccctttatcc-tttctctctattcttatatactttacaatatcttgcaatgctttggatta 42940014  T
Q  394 attttataacaacc 407  Q
    |||| |||||||||    
T  42940015 atttcataacaacc 42940028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 294 - 381
Target Start/End: Original strand, 42937616 - 42937702
Alignment:
Q  294 gacacacttatgaagtaatacaatatactctcttgttctccatttatccttttctctctacttttctatgttgtacaatatcttgcaa 381  Q
    ||||||||| ||||||||||||||||||||||||||||| | ||||||| |||||||||| | || |||  | |||||||||||||||    
T  42937616 gacacacttttgaagtaatacaatatactctcttgttcttcctttatcc-tttctctctattcttatatactttacaatatcttgcaa 42937702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 285 - 362
Target Start/End: Complemental strand, 23818736 - 23818659
Alignment:
Q  285 aatgtaaaggacacacttatgaagtaatacaatatactctcttgttctccatttatccttttctctctacttttctat 362  Q
    ||||||||| |||||||| |||||||| |||||||||| |||| |||||| ||| ||  |||||||||||| ||||||    
T  23818736 aatgtaaagtacacacttgtgaagtaaaacaatatactttcttcttctccctttttctctttctctctactattctat 23818659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 558097 - 558022
Alignment:
Q  47 cccaccggatttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaata 122  Q
    ||||| || |||||||||||||| |||||||||| ||||||||||  ||||||||| |||||||||| |||||||||    
T  558097 cccactgggtttttctctagtaa-ggttttaatgaggcatatcctcgatggacatccaagggggagtgttatgaata 558022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 404
Target Start/End: Original strand, 7578715 - 7578783
Alignment:
Q  336 tttatccttttctctctacttttctatgttgtacaatatcttgcaatgctttggattaattttataaca 404  Q
    ||||| ||||| |||||||| || |||||||||||||||||| |||| |||| ||||||||| ||||||    
T  7578715 tttatacttttatctctactcttatatgttgtacaatatcttacaatactttagattaatttcataaca 7578783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 183 - 303
Target Start/End: Original strand, 17188404 - 17188524
Alignment:
Q  183 atgagtaaatggctttagtcattaccatttacatttagtcctataactcttcgtacacttgtaacttacaatatttgtggcttataaataggacctatat 282  Q
    ||||||||||| ||||| |||||||  ||   |||||||||||| ||||||  |  |||||||| | |||||||||||| | |||||||| ||| |||||    
T  17188404 atgagtaaatgactttactcattacgtttggaatttagtcctatgactctttatgtacttgtaattcacaatatttgtgtcctataaataagacttatat 17188503  T
Q  283 gcaatgtaaaggacacactta 303  Q
     |||||||||| | |||||||    
T  17188504 acaatgtaaagaatacactta 17188524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 56 - 122
Target Start/End: Original strand, 25498997 - 25499063
Alignment:
Q  56 tttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaata 122  Q
    |||||||||||||| |||||||||| ||||||||||  ||||||||| |||||||||| |||||||||    
T  25498997 tttttctctagtaa-ggttttaatgaggcatatcctcgatggacatccaagggggagtgttatgaata 25499063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 8248054 - 8248110
Alignment:
Q  56 tttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt 113  Q
    |||||||||||||| |||||||||| ||||||||||  ||||||||| ||||||||||    
T  8248054 tttttctctagtaa-ggttttaatgaggcatatcctcaatggacatccaagggggagt 8248110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 32148411 - 32148486
Alignment:
Q  47 cccaccggatttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaata 122  Q
    ||||| || |||||||||||||| |||||||||| |||||||||   ||||||||| |||||||||| |||||||||    
T  32148411 cccactgggtttttctctagtaa-ggttttaatgaggcatatccgagatggacatccaagggggagtgttatgaata 32148486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 294 - 362
Target Start/End: Original strand, 34322491 - 34322559
Alignment:
Q  294 gacacacttatgaagtaatacaatatactctcttgttctccatttatccttttctctctacttttctat 362  Q
    |||||| || ||||||||| |||||||||||||| ||||||  |||||  |||||||||||| ||||||    
T  34322491 gacacatttgtgaagtaatgcaatatactctcttattctccccttatctctttctctctactattctat 34322559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 340508 - 340452
Alignment:
Q  56 tttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt 113  Q
    |||||||||| ||| |||||||||| ||||||||||  ||||||||| ||||||||||    
T  340508 tttttctctaataa-ggttttaatgaggcatatcctcaatggacatccaagggggagt 340452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 151
Target Start/End: Original strand, 20362606 - 20362686
Alignment:
Q  69 aaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaataataatattagcatgatgtggatgtccatt 151  Q
    |||||||||||| ||||||||| | ||||||||| ||  |||||| |||||||| |||||| |   ||||||||||||||||||    
T  20362606 aaggttttaatgaggcatatccatgatggacatccaaaagggagtgttatgaatgataataat---atgatgtggatgtccatt 20362686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 113
Target Start/End: Original strand, 29185482 - 29185526
Alignment:
Q  69 aaggttttaatggggcatatccttcatggacatctaagggggagt 113  Q
    |||||||||||| ||||||||||  ||||||||| ||||||||||    
T  29185482 aaggttttaatgaggcatatcctcgatggacatccaagggggagt 29185526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 239 - 302
Target Start/End: Complemental strand, 34226119 - 34226055
Alignment:
Q  239 acttgtaacttacaatatttgtggcttataaataggacctata-tgcaatgtaaaggacacactt 302  Q
    ||||||||||||| ||||||||| | |||||||||||| |||| | |||||||||  ||||||||    
T  34226119 acttgtaacttaccatatttgtgtcctataaataggacttatatttcaatgtaaataacacactt 34226055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 239 - 302
Target Start/End: Complemental strand, 34230247 - 34230183
Alignment:
Q  239 acttgtaacttacaatatttgtggcttataaataggacctata-tgcaatgtaaaggacacactt 302  Q
    ||||||||||||| ||||||||| | |||||||||||| |||| | |||||||||  ||||||||    
T  34230247 acttgtaacttaccatatttgtgtcctataaataggacttatatttcaatgtaaataacacactt 34230183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 286 - 406
Target Start/End: Complemental strand, 35339011 - 35338891
Alignment:
Q  286 atgtaaaggacacacttatgaagtaatacaatatactctcttgttctccatttatccttttctctctacttttctatgttgtacaatatcttgcaatgct 385  Q
    |||||||| | |||||| ||||  ||||||||||||| |||| |||||  ||||||| |||  ||||| | || |||  | |||||||||||||||| ||    
T  35339011 atgtaaagaatacacttgtgaaagaatacaatatactatcttattctctctttatccctttaactctattcttatatactttacaatatcttgcaatact 35338912  T
Q  386 ttggattaattttataacaac 406  Q
    ||  || ||||| ||||||||    
T  35338911 ttaaatcaatttcataacaac 35338891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 42208827 - 42208902
Alignment:
Q  47 cccaccggatttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaata 122  Q
    ||||| ||||||||||||||| |||||||||||| ||||| |||    |||||||| |||||||||| |||||||||    
T  42208827 cccactggatttttctctagt-aaggttttaatgaggcatgtccgaggtggacatccaagggggagtgttatgaata 42208902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 97; Significance: 2e-47; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 265 - 404
Target Start/End: Original strand, 25398220 - 25398359
Alignment:
Q  265 tataaataggacctatatg-caatgtaaaggacacacttatgaagtaatacaatatactctcttgttctccatttatccttttctctctacttttctatg 363  Q
    ||||||||||||||| ||  |||||||| | |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25398220 tataaataggacctacattacaatgtaatg-acacacttgtgaagtaatacaatatactctcttgttctccctttatccttttctctctacttttctatg 25398318  T
Q  364 ttgtacaatatcttgcaatgctttggattaattttataaca 404  Q
     ||||||||||||||||||||||||||||||||| ||||||    
T  25398319 gtgtacaatatcttgcaatgctttggattaatttcataaca 25398359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 122 - 405
Target Start/End: Original strand, 17190636 - 17190918
Alignment:
Q  122 aataatattagcatgatgtggatgtccattgatcctaagctttctatattccctaacccccatgagtaaatggctttagtcattaccatttacatttagt 221  Q
    ||||||||||  ||||||||||||||||||   ||||  |||||||||| || ||||  | |||| |||||| ||||| |||||   ||| | ||||| |    
T  17190636 aataatattaatatgatgtggatgtccattttccctagactttctatatcccttaactactatgactaaatgactttattcattcttattgatatttaat 17190735  T
Q  222 cctataactcttcgtacacttgtaacttacaatatttgtggcttataaataggacctatat-gcaatgtaaaggacacacttatgaagtaatacaatata 320  Q
    || || ||||||| || |||||||| ||||||  ||||   | ||||||||||| ||| || || ||||||||| |||||||  |||| |||||||||||    
T  17190736 cccatgactcttcatatacttgtaagttacaacttttgcatcctataaataggatctacattgccatgtaaagggcacacttgagaagaaatacaatata 17190835  T
Q  321 ctctcttgttctccatttatccttttctctctacttttctatgttgtacaatatcttgcaatgctttggattaattttataacaa 405  Q
    |||| ||||||| | |||||| |||||||| |  |||| ||||||||||||||||||||||| |||| ||||| ||| |||||||    
T  17190836 ctcttttgttcttcctttatcattttctctat--ttttttatgttgtacaatatcttgcaattctttagattattttcataacaa 17190918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 217 - 404
Target Start/End: Original strand, 21143036 - 21143224
Alignment:
Q  217 ttagtcctataactcttcgtacacttgtaacttacaatattt-gtggcttataaataggacctatatg-caatgtaaaggacacacttatgaagtaatac 314  Q
    |||||| ||| |||||||||  | ||||||||||| |||||| |||    ||||||||||| |||||  |||||||||| |||||||| ||||||||| |    
T  21143036 ttagtcttatgactcttcgtgtatttgtaacttaccatattttgtgttcaataaataggacttatatctcaatgtaaagaacacacttgtgaagtaatgc 21143135  T
Q  315 aatatactctcttgttctccatttatccttttctctctacttttctatgttgtacaatatcttgcaatgctttggattaattttataaca 404  Q
    || ||||||||||||||||| || ||||||||||||||  | ||||||||||||||  |||||||||| |||| |||||| |||||||||    
T  21143136 aacatactctcttgttctcccttcatccttttctctct-gtcttctatgttgtacacgatcttgcaatactttagattaactttataaca 21143224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 265 - 368
Target Start/End: Complemental strand, 17275160 - 17275056
Alignment:
Q  265 tataaataggacctatat-gcaatgtaaaggacacacttatgaagtaatacaatatactctcttgttctccatttatccttttctctctacttttctatg 363  Q
    ||||||||||||||| || || |||||||| ||||||||  |||| |||||||||| |||||||||||||| |||||  |||||||||||||||||||||    
T  17275160 tataaataggacctacattgccatgtaaagaacacacttgagaagcaatacaatatgctctcttgttctccctttatatttttctctctacttttctatg 17275061  T
Q  364 ttgta 368  Q
    |||||    
T  17275060 ttgta 17275056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 255 - 371
Target Start/End: Complemental strand, 19441215 - 19441097
Alignment:
Q  255 atttgtggcttataaataggacctatat-gcaatgtaaaggacacacttatgaagtaatacaatatactctctt-gttctccatttatccttttctctct 352  Q
    ||||||| | |||||||||||| ||||| | ||| ||| |||||||||| |||||||||| ||||||||||||| ||||||  |||||| ||||||||||    
T  19441215 atttgtgtcctataaataggacatatattgtaatataacggacacacttgtgaagtaatataatatactctctttgttctcactttatcattttctctct 19441116  T
Q  353 acttttctatgttgtacaa 371  Q
    |||||| ||||||||||||    
T  19441115 acttttttatgttgtacaa 19441097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 270 - 368
Target Start/End: Complemental strand, 17270220 - 17270121
Alignment:
Q  270 ataggacctatat-gcaatgtaaaggacacacttatgaagtaatacaatatactctcttgttctccatttatccttttctctctacttttctatgttgta 368  Q
    |||||||||| || || |||||||| ||||||||  |||| |||||||||||||||||| |||||| |||||  |||||||||||||||||||| |||||    
T  17270220 ataggacctacattgccatgtaaagaacacacttgagaagcaatacaatatactctctttttctccttttatatttttctctctacttttctatattgta 17270121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 17270404 - 17270335
Alignment:
Q  56 tttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaataata 125  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||    
T  17270404 tttttctctagtaa-ggttttaatgaggcatatccttcatggacatccaagggggagtgttatgaataata 17270335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 294 - 352
Target Start/End: Original strand, 25393930 - 25393988
Alignment:
Q  294 gacacacttatgaagtaatacaatatactctcttgttctccatttatccttttctctct 352  Q
    ||||||||| |||| |||||||||||||||||||||||| | |||||| ||||||||||    
T  25393930 gacacacttgtgaactaatacaatatactctcttgttcttcctttatctttttctctct 25393988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 122
Target Start/End: Complemental strand, 19441386 - 19441316
Alignment:
Q  52 cggatttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaata 122  Q
    |||||||||||||||||| |||||||||| |||||||| |  ||||||||| |||||||||| |||||||||    
T  19441386 cggatttttctctagtaa-ggttttaatgaggcatatcatcaatggacatccaagggggagtgttatgaata 19441316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 14855871 - 14855946
Alignment:
Q  47 cccaccggatttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaata 122  Q
    ||||| || |||||||||||||| |||||||||| |||||||||   ||||||||| |||||||||| |||||||||    
T  14855871 cccactgggtttttctctagtaa-ggttttaatgaggcatatccgagatggacatccaagggggagtgttatgaata 14855946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 23427438 - 23427500
Alignment:
Q  69 aaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaataataatatt 130  Q
    |||||||||||| ||||||||||  ||||||||| |||||||||| |||| |||| |||||||    
T  23427438 aaggttttaatgaggcatatcctcgatggacatccaagggggagtgttataaatattaatatt 23427500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 53 - 101
Target Start/End: Original strand, 25397856 - 25397903
Alignment:
Q  53 ggatttttctctagtaaaggttttaatggggcatatccttcatggacat 101  Q
    ||||||||| ||||||| |||||||||| ||||||||||| ||||||||    
T  25397856 ggatttttcactagtaa-ggttttaatgaggcatatccttgatggacat 25397903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 4e-42; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 255 - 405
Target Start/End: Original strand, 27317701 - 27317851
Alignment:
Q  255 atttgtggcttataaataggacctatat-gcaatgtaaaggacacacttatgaagtaatacaatatactctcttgttctccatttatccttttctctcta 353  Q
    ||||||| | |||||||| ||||||||| | ||||||||| ||||||||  |||||||||||||||||||||||||||||| |||||| | |||||||||    
T  27317701 atttgtgtcctataaatatgacctatattgaaatgtaaag-acacacttgagaagtaatacaatatactctcttgttctccctttatcttgttctctcta 27317799  T
Q  354 cttttctatgttgtacaatatcttgcaatgctttggattaattttataacaa 405  Q
    || |||||||||||||||||||||| |||||||| |||||||||||||||||    
T  27317800 ctcttctatgttgtacaatatcttgaaatgcttttgattaattttataacaa 27317851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 114 - 292
Target Start/End: Complemental strand, 11323859 - 11323684
Alignment:
Q  114 ttatgaataa-taatattagcatgatgtggatgtccattgatcctaagctttctatattccctaacccccatgagtaaatggctttagtcattaccattt 212  Q
    |||||||||| | |||||||||||||  |||||||||||| ||||||||||||||||||||||||| |  |||     ||| ||||| ||||||| ||||    
T  11323859 ttatgaataaatgatattagcatgatacggatgtccattgttcctaagctttctatattccctaactcttatgg----atgactttaatcattacaattt 11323764  T
Q  213 acatttagtcctataactcttcgtacacttgtaacttacaatatttgtggcttataaataggacctatatgcaatgtaaa 292  Q
    | |||||||||||| ||||||| |  |||||||||||||||||||| || ||||||||||||| ||||||||||||||||    
T  11323763 atatttagtcctatgactcttcatttacttgtaacttacaatatttatgtcttataaataggatctatatgcaatgtaaa 11323684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 114 - 292
Target Start/End: Complemental strand, 11481880 - 11481705
Alignment:
Q  114 ttatgaataa-taatattagcatgatgtggatgtccattgatcctaagctttctatattccctaacccccatgagtaaatggctttagtcattaccattt 212  Q
    |||||||||| | |||||||||||||  |||||||||||| ||||||||||||||||||||||||| |  |||     ||| ||||| ||||||| ||||    
T  11481880 ttatgaataaatgatattagcatgatacggatgtccattgttcctaagctttctatattccctaactcttatgg----atgactttaatcattacaattt 11481785  T
Q  213 acatttagtcctataactcttcgtacacttgtaacttacaatatttgtggcttataaataggacctatatgcaatgtaaa 292  Q
    | |||||||||||| ||||||| |  |||||||||||||||||||| || ||||||||||||| ||||||||||||||||    
T  11481784 atatttagtcctatgactcttcatttacttgtaacttacaatatttatgtcttataaataggatctatatgcaatgtaaa 11481705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 265 - 398
Target Start/End: Original strand, 15552973 - 15553106
Alignment:
Q  265 tataaataggacctatat-gcaatgtaaaggacacacttatgaagtaatacaatatactctcttgttctccatttatccttttctctctacttttctatg 363  Q
    |||||||||||||||||| ||||||||| | |||||||| ||||||||||||||||||| |||| |||||| |||||| |||||||| ||||||| ||||    
T  15552973 tataaataggacctatattgcaatgtaatg-acacacttgtgaagtaatacaatatactatcttattctccctttatctttttctctttacttttttatg 15553071  T
Q  364 ttgtacaatatcttgcaatgctttggattaatttt 398  Q
    ||||| ||||||||||||||||||| |||||||||    
T  15553072 ttgtataatatcttgcaatgctttgaattaatttt 15553106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 306 - 406
Target Start/End: Complemental strand, 5032571 - 5032472
Alignment:
Q  306 aagtaatacaatatactctcttgttctccatttatccttttctctctacttttctatgttgtacaatatcttgcaatgctttggattaattttataacaa 405  Q
    ||||||| ||||||| |||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||    
T  5032571 aagtaatgcaatatattctcttcttctcc-tttatcattttctctctacttttctatgttgtacaatatcttgcaatactttagattaatttcataacaa 5032473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 285 - 378
Target Start/End: Complemental strand, 18640544 - 18640451
Alignment:
Q  285 aatgtaaaggacacacttatgaagtaatacaatatactctcttgttctccatttatccttttctctctacttttctatgttgtacaatatcttg 378  Q
    ||||||||| |||||||| ||||||||||||||||||| ||||||||||  ||||||| |||| ||||| | || ||| || ||||||||||||    
T  18640544 aatgtaaagaacacacttttgaagtaatacaatatactatcttgttctctgtttatccctttcactctattcttatatattttacaatatcttg 18640451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 53 - 123
Target Start/End: Original strand, 26028630 - 26028700
Alignment:
Q  53 ggatttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaataa 123  Q
    ||||||||||||| ||| |||||||||| |||| |||||||||||||||| |||||||||| ||||||||||    
T  26028630 ggatttttctctaataa-ggttttaatgaggcacatccttcatggacatccaagggggagtattatgaataa 26028700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 254 - 334
Target Start/End: Complemental strand, 3850471 - 3850391
Alignment:
Q  254 tatttgtggcttataaataggacctatat-gcaatgtaaaggacacacttatgaagtaatacaatatactctcttgttctcc 334  Q
    |||||||| | ||||||||| | |||||| ||||| ||||| |||||||||||||||||| |||||||||||||| ||||||    
T  3850471 tatttgtgtcctataaatagaatctatattgcaatataaag-acacacttatgaagtaatgcaatatactctcttcttctcc 3850391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 285 - 404
Target Start/End: Complemental strand, 18643261 - 18643142
Alignment:
Q  285 aatgtaaaggacacacttatgaagtaatacaatatactctcttgttctccatttatccttttctctctacttttctatgttgtacaatatcttgcaatgc 384  Q
    ||||||||| |||||||| ||||||||||||||||||| | || |||||  ||||||||||||  |||| | || |||  | |||||||||||| |||      
T  18643261 aatgtaaagaacacacttgtgaagtaatacaatatactatgttattctctctttatccttttcaatctattcttatatactttacaatatcttgtaatat 18643162  T
Q  385 tttggattaattttataaca 404  Q
    |||| || ||||| ||||||    
T  18643161 tttgaatcaatttcataaca 18643142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 31093162 - 31093106
Alignment:
Q  56 tttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt 113  Q
    |||||||||||||| |||||||||| ||||||||||  ||||||||| ||||||||||    
T  31093162 tttttctctagtaa-ggttttaatgaggcatatcctcaatggacatccaagggggagt 31093106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 113
Target Start/End: Original strand, 11660122 - 11660177
Alignment:
Q  57 ttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt 113  Q
    ||||||||||||| |||||||||| ||||||||||  ||||||||| ||||||||||    
T  11660122 ttttctctagtaa-ggttttaatgaggcatatcctcaatggacatccaagggggagt 11660177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 27179195 - 27179120
Alignment:
Q  47 cccaccggatttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaata 122  Q
    ||||| || |||||||||||||| |||||||||| |||||||||   ||||||||| |||||||||| |||||||||    
T  27179195 cccactgggtttttctctagtaa-ggttttaatgaggcatatccgagatggacatccaagggggagtgttatgaata 27179120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 122
Target Start/End: Complemental strand, 33493153 - 33493087
Alignment:
Q  56 tttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaata 122  Q
    |||||||||||||| |||||||||| |||||||||   ||||||||| |||||||||| |||||||||    
T  33493153 tttttctctagtaa-ggttttaatgaggcatatccaagatggacatccaagggggagtgttatgaata 33493087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 122
Target Start/End: Complemental strand, 145608 - 145539
Alignment:
Q  53 ggatttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaata 122  Q
    |||||||||||| |||| ||||| |||  ||||||||||| ||||||||| |||||||||| |||||||||    
T  145608 ggatttttctctggtaa-ggtttcaataaggcatatcctttatggacatccaagggggagtgttatgaata 145539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 130
Target Start/End: Original strand, 28519231 - 28519293
Alignment:
Q  69 aaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaataataatatt 130  Q
    |||||||||||| ||||||||||  ||||||||| |||||||||| |||| |||| |||||||    
T  28519231 aaggttttaatgaggcatatcctcgatggacatccaagggggagtgttataaatattaatatt 28519293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 122
Target Start/End: Original strand, 29547696 - 29547750
Alignment:
Q  69 aaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaata 122  Q
    |||||||||||| ||||||||||  ||||||||| |||||||||| |||||||||    
T  29547696 aaggttttaatgaggcatatcctcgatggacatccaagggggagtgttatgaata 29547750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 345
Target Start/End: Complemental strand, 145439 - 145359
Alignment:
Q  265 tataaataggacctatatg-caatgtaaaggacacacttatgaagtaatacaatatactctcttgttctccatttatccttt 345  Q
    ||||||||||||||| ||  |||||||| | ||||||||  |||| |||||| |||||||||||||||||  ||||||||||    
T  145439 tataaataggacctacattacaatgtaatg-acacacttgagaagcaatacactatactctcttgttctctctttatccttt 145359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 354 - 387
Target Start/End: Complemental strand, 18187067 - 18187034
Alignment:
Q  354 cttttctatgttgtacaatatcttgcaatgcttt 387  Q
    |||||||||||| |||||||||||||||||||||    
T  18187067 cttttctatgttatacaatatcttgcaatgcttt 18187034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 18535194 - 18535138
Alignment:
Q  56 tttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt 113  Q
    |||||||| ||||| |||||||||| ||||||||||  ||||||||| ||||||||||    
T  18535194 tttttctccagtaa-ggttttaatgaggcatatcctcaatggacatccaagggggagt 18535138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 37356948 - 37356892
Alignment:
Q  56 tttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt 113  Q
    |||||||||||||| |||||||||| |||||||| |  ||||||||| ||||||||||    
T  37356948 tttttctctagtaa-ggttttaatgaggcatatcttcaatggacatccaagggggagt 37356892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 209 - 292
Target Start/End: Complemental strand, 14762348 - 14762264
Alignment:
Q  209 atttacatttagtcctataactcttcgtacacttgtaacttacaatatttgtggcttataaataggacctata-tgcaatgtaaa 292  Q
    |||||||||||||| ||| ||||||| |  ||||||||||||  | |||||||   |||||||||||| |||| |||||||||||    
T  14762348 atttacatttagtcttatgactcttcatgtacttgtaacttattacatttgtgttctataaataggacttatattgcaatgtaaa 14762264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 16168721 - 16168777
Alignment:
Q  72 gttttaatggggcatatccttcatggacatctaagggggagt-ttatgaataataat 127  Q
    ||||||||| ||||||||||| ||| ||||| |||| ||||| ||||||||||||||    
T  16168721 gttttaatgaggcatatccttgatgaacatccaaggaggagtgttatgaataataat 16168777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 3e-30; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 254 - 404
Target Start/End: Original strand, 25590052 - 25590202
Alignment:
Q  254 tatttgtggcttataaataggacctata-tgcaatgtaaaggacacacttatgaagtaatacaatatactctcttgttctccatttatccttttctctct 352  Q
    |||||||  |||||||||| |||||||| ||||| |||||||  |||||| ||||| ||| ||||||||||| || |||||  |||||||||||||||||    
T  25590052 tatttgtatcttataaatatgacctataatgcaaagtaaaggt-acacttgtgaagcaatgcaatatactcttttattctcactttatccttttctctct 25590150  T
Q  353 acttttctatgttgtacaatatcttgcaatgctttggattaattttataaca 404  Q
    |||||| |||||||||||||||| |||||| |||| ||||||||| ||||||    
T  25590151 acttttatatgttgtacaatatcatgcaatactttagattaatttcataaca 25590202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 286 - 404
Target Start/End: Complemental strand, 28663672 - 28663554
Alignment:
Q  286 atgtaaaggacacacttatgaagtaatacaatatactctcttgttctccatttatccttttctctctacttttctatgttgtacaatatcttgcaatgct 385  Q
    |||||||| ||||||||  |||  ||||||||||| ||| ||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||  |    
T  28663672 atgtaaagaacacacttgagaaacaatacaatatattcttttgttctccctctatccttttctctctaattttctatgttgtacaatatcttgcaatatt 28663573  T
Q  386 ttggattaattttataaca 404  Q
    || ||||||||| ||||||    
T  28663572 ttagattaatttcataaca 28663554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 265 - 404
Target Start/End: Original strand, 17935611 - 17935751
Alignment:
Q  265 tataaataggacctatatg-caatgtaaaggacacacttatgaagtaatacaatatactctcttgttctccatttatccttttctctctacttttctatg 363  Q
    |||||||||||| |||||  ||||||||| |||||||||  |||| ||||||| ||||||| ||||| ||  ||||||| |||||||||||| |||||||    
T  17935611 tataaataggacttatatctcaatgtaaaagacacacttgagaagcaatacaacatactcttttgttatctctttatccctttctctctactcttctatg 17935710  T
Q  364 ttgtacaatatcttgcaatgctttggattaattttataaca 404  Q
     |||||||||||||||||||||||  || ||||| ||||||    
T  17935711 gtgtacaatatcttgcaatgcttttcatcaatttcataaca 17935751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 294 - 404
Target Start/End: Complemental strand, 29742169 - 29742060
Alignment:
Q  294 gacacacttatgaagtaatacaatatactctcttgttctccatttatccttttctctctacttttctatgttgtacaatatcttgcaatgctttggatta 393  Q
    ||||||||| ||||||||||||||||||||| ||||||||| ||||||| |||||||||| | || |||  | |||||||| ||||||||| ||||||||    
T  29742169 gacacacttgtgaagtaatacaatatactcttttgttctccctttatcc-tttctctctattcttatatactttacaatattttgcaatgcattggatta 29742071  T
Q  394 attttataaca 404  Q
    |||| ||||||    
T  29742070 atttcataaca 29742060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 310 - 405
Target Start/End: Complemental strand, 29948434 - 29948339
Alignment:
Q  310 aatacaatatactctcttgttctccatttatccttttctctctacttttctatgttgtacaatatcttgcaatgctttggattaattttataacaa 405  Q
    ||||||||||||||| ||||||||| | |||| ||||||||||||| ||| |||||| |||||||||||| || |||| ||||||||| |||||||    
T  29948434 aatacaatatactcttttgttctccctgtatcattttctctctactcttcgatgttgcacaatatcttgccatactttagattaatttcataacaa 29948339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 265 - 345
Target Start/End: Complemental strand, 18080020 - 18079940
Alignment:
Q  265 tataaataggacctatatg-caatgtaaaggacacacttatgaagtaatacaatatactctcttgttctccatttatccttt 345  Q
    ||||||||||||||| ||  |||||||| | |||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  18080020 tataaataggacctacattacaatgtaatg-acacacttgtgaagtaatacaatatactctcttgttctccctttatccttt 18079940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 305 - 382
Target Start/End: Original strand, 35105178 - 35105251
Alignment:
Q  305 gaagtaatacaatatactctcttgttctccatttatccttttctctctacttttctatgttgtacaatatcttgcaat 382  Q
    |||||||||||| ||||||| ||||| ||    ||||| |||||||| ||||||||||||||||||||||||||||||    
T  35105178 gaagtaatacaacatactcttttgttatc----tatccctttctctccacttttctatgttgtacaatatcttgcaat 35105251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 123
Target Start/End: Original strand, 17945692 - 17945759
Alignment:
Q  56 tttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaataa 123  Q
    |||||||||||||| |||||||||| |||| |||||||||||||||| |||| ||||| ||||||||||    
T  17945692 tttttctctagtaa-ggttttaatgaggcacatccttcatggacatccaaggaggagtgttatgaataa 17945759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 112
Target Start/End: Complemental strand, 34648146 - 34648091
Alignment:
Q  56 tttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggag 112  Q
    ||||||||||| ||||||||||||| ||||||||||| ||||||||| |||||||||    
T  34648146 tttttctctag-aaaggttttaatgaggcatatccttgatggacatccaagggggag 34648091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 255 - 324
Target Start/End: Complemental strand, 24213365 - 24213295
Alignment:
Q  255 atttgtggcttataaataggacctatat-gcaatgtaaaggacacacttatgaagtaatacaatatactct 324  Q
    ||||||| | |||||||||||||||||| | ||||||||| ||| |||| ||||||||||||||| |||||    
T  24213365 atttgtgtcctataaataggacctatattgtaatgtaaagtacatacttgtgaagtaatacaatacactct 24213295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 16675508 - 16675564
Alignment:
Q  56 tttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt 113  Q
    |||||||||||||| |||||||||| ||||||||||  ||||||||| ||||||||||    
T  16675508 tttttctctagtaa-ggttttaatgaggcatatcctcaatggacatccaagggggagt 16675564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 367 - 404
Target Start/End: Complemental strand, 18058311 - 18058274
Alignment:
Q  367 tacaatatcttgcaatgctttggattaattttataaca 404  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  18058311 tacaatatcttgcaatgctttggattaatttcataaca 18058274  T

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Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 21171402 - 21171346
Alignment:
Q  56 tttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt 113  Q
    |||||||||||||| |||||||||| ||||||||||  ||||||||| ||||||||||    
T  21171402 tttttctctagtaa-ggttttaatgaggcatatcctcaatggacatccaagggggagt 21171346  T

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Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 35264755 - 35264699
Alignment:
Q  56 tttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt 113  Q
    |||||||||||||| |||||||||| ||||||||||  ||||||||| ||||||||||    
T  35264755 tttttctctagtaa-ggttttaatgaggcatatcctcaatggacatccaagggggagt 35264699  T

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Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 123
Target Start/End: Original strand, 19699287 - 19699354
Alignment:
Q  56 tttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaataa 123  Q
    |||||||||||||| |||||||||| |||| |||||||||||||||  |||||||| | ||||||||||    
T  19699287 tttttctctagtaa-ggttttaatgaggcacatccttcatggacattcaagggggactgttatgaataa 19699354  T

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Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 404
Target Start/End: Original strand, 21154189 - 21154257
Alignment:
Q  336 tttatccttttctctctacttttctatgttgtacaatatcttgcaatgctttggattaattttataaca 404  Q
    ||||||| |||||||||  | |||||||||||||||||||||||||| | ||  |||||||| ||||||    
T  21154189 tttatccctttctctctgttcttctatgttgtacaatatcttgcaatacattaaattaatttcataaca 21154257  T

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Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 404
Target Start/End: Original strand, 21161324 - 21161392
Alignment:
Q  336 tttatccttttctctctacttttctatgttgtacaatatcttgcaatgctttggattaattttataaca 404  Q
    ||||||| |||||||||  | |||||||||||||||||||||||||| | ||  |||||||| ||||||    
T  21161324 tttatccctttctctctgttcttctatgttgtacaatatcttgcaatacattaaattaatttcataaca 21161392  T

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Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 28367206 - 28367131
Alignment:
Q  47 cccaccggatttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaata 122  Q
    ||||| || |||||||||||||| |||||||||| |||||||||   ||||||||| |||||||||| |||||||||    
T  28367206 cccactgggtttttctctagtaa-ggttttaatgaggcatatccgagatggacatccaagggggagtgttatgaata 28367131  T

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Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 333
Target Start/End: Original strand, 40786726 - 40786789
Alignment:
Q  271 taggacctatat-gcaatgtaaaggacacacttatgaagtaatacaatatactctcttgttctc 333  Q
    |||||||||||| | ||||||||| |||||||| ||||||||||||||| |||||  |||||||    
T  40786726 taggacctatattgtaatgtaaagaacacacttgtgaagtaatacaatacactcttatgttctc 40786789  T

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Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 318
Target Start/End: Complemental strand, 24228348 - 24228294
Alignment:
Q  265 tataaataggacctatat-gcaatgtaaaggacacacttatgaagtaatacaata 318  Q
    ||||||||||| |||||| | ||||||||| |||||||| |||||||||||||||    
T  24228348 tataaataggatctatattgtaatgtaaagtacacacttgtgaagtaatacaata 24228294  T

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Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 113
Target Start/End: Complemental strand, 23053594 - 23053538
Alignment:
Q  56 tttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt 113  Q
    |||||||||||||| |||||||||| |||||||| |  ||||||||| ||||||||||    
T  23053594 tttttctctagtaa-ggttttaatgaggcatatcttcaatggacatccaagggggagt 23053538  T

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Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 239 - 330
Target Start/End: Original strand, 17964345 - 17964437
Alignment:
Q  239 acttgtaacttacaatatttgtggcttataaataggacctatatg-caatgtaaaggacacacttatgaagtaatacaatatactctcttgtt 330  Q
    ||||||||||||| | || |||| | |||||||| ||| |||||  | |||||||||||||||||  |||| ||||||| ||||||| |||||    
T  17964345 acttgtaacttaccacatgtgtgtcctataaatatgacttatatctcgatgtaaaggacacacttgagaagcaatacaacatactcttttgtt 17964437  T

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Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 18080167 - 18080116
Alignment:
Q  56 tttttctctagtaaaggttttaatggggcatatccttcatggacatctaaggg 108  Q
    |||| ||||||||| |||||||||| ||||||||||| ||||||||| |||||    
T  18080167 ttttactctagtaa-ggttttaatgaggcatatccttgatggacatccaaggg 18080116  T

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Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 57 - 113
Target Start/End: Complemental strand, 24213530 - 24213475
Alignment:
Q  57 ttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt 113  Q
    ||||||||||||| |||||||||| ||||||||||  || |||||| ||||||||||    
T  24213530 ttttctctagtaa-ggttttaatgaggcatatcctcgatagacatccaagggggagt 24213475  T

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Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 69 - 113
Target Start/End: Complemental strand, 25365597 - 25365553
Alignment:
Q  69 aaggttttaatggggcatatccttcatggacatctaagggggagt 113  Q
    |||||||||||| ||||||||||  ||||||||| ||||||||||    
T  25365597 aaggttttaatgaggcatatcctcgatggacatccaagggggagt 25365553  T

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Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 255 - 334
Target Start/End: Complemental strand, 31109074 - 31108995
Alignment:
Q  255 atttgtggcttataaataggacctata-tgcaatgtaaaggacacacttatgaagtaatacaatatactctcttgttctcc 334  Q
    ||||||| | ||||||||||| ||||| |||||||| || ||||||||| |||||||||| ||||||| ||| | ||||||    
T  31109074 atttgtgtcatataaataggatctatattgcaatgt-aatgacacacttgtgaagtaatataatataccctccttttctcc 31108995  T

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Target: scaffold0102 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 54 - 113
Target Start/End: Original strand, 13967 - 14025
Alignment:
Q  54 gatttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt 113  Q
    |||||||||||||||| |||||||||| ||||||||||  ||||||||| ||||||||||    
T  13967 gatttttctctagtaa-ggttttaatgaggcatatcctcaatggacatccaagggggagt 14025  T

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Target: scaffold0014 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 56 - 113
Target Start/End: Original strand, 111819 - 111875
Alignment:
Q  56 tttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt 113  Q
    |||||||||||||| |||||||||| ||||||||||  ||||||||| ||||||||||    
T  111819 tttttctctagtaa-ggttttaatgaggcatatcctcaatggacatccaagggggagt 111875  T

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Target: scaffold0124 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 39377 - 39451
Alignment:
Q  47 cccaccggatttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaata 122  Q
    ||||| || |||||||||||||| |||||||||| ||||||||||  ||||||||| |||||||||| |||||||||    
T  39377 cccactgggtttttctctagtaa-ggttttaatgaggcatatcctcgatggacatc-aagggggagtgttatgaata 39451  T

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Target: scaffold0004 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 345896 - 345821
Alignment:
Q  47 cccaccggatttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaata 122  Q
    ||||| || |||||||||||||| |||||||||| |||||||||   ||||||||| |||||||||| |||||||||    
T  345896 cccactgggtttttctctagtaa-ggttttaatgaggcatatccgagatggacatccaagggggagtgttatgaata 345821  T

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Target: scaffold0066 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 122
Target Start/End: Original strand, 11534 - 11604
Alignment:
Q  52 cggatttttctctagtaaaggttttaatggggcatatccttcatggacatctaagggggagt-ttatgaata 122  Q
    |||||||||||||||| | |||||||||| ||||||||||  ||||||||| ||| |||||| |||||||||    
T  11534 cggatttttctctagt-atggttttaatgaggcatatcctcgatggacatccaagagggagtgttatgaata 11604  T

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