View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10151A_low_188 (Length: 243)
Name: NF10151A_low_188
Description: NF10151A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10151A_low_188 |
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Alignment Details
Target: chr7 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 74
Target Start/End: Original strand, 7876154 - 7876196
Alignment:
| Q |
32 |
ttaggggacgacgtgaataatactgcctaacgtaagcatacaa |
74 |
Q |
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| T |
7876154 |
ttaggggacgacgtgaataatactgcctaacgtaagcatacaa |
7876196 |
T |
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Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 7876544 - 7876584
Alignment:
| Q |
202 |
gtgttgcatgttaaaagtaaaagtctaagcttggttgagatg |
243 |
Q |
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| T |
7876544 |
gtgttgcatgttaaaagtaaaagtct-agcttggttgagatg |
7876584 |
T |
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