View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10151A_low_225 (Length: 230)

Name: NF10151A_low_225
Description: NF10151A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10151A_low_225
NF10151A_low_225
[»] scaffold0006 (1 HSPs)
scaffold0006 (7-121)||(198923-199037)
[»] chr3 (6 HSPs)
chr3 (7-121)||(34558381-34558495)
chr3 (7-121)||(15549039-15549153)
chr3 (7-121)||(12020472-12020586)
chr3 (14-121)||(17203187-17203294)
chr3 (7-63)||(17760002-17760058)
chr3 (7-63)||(19061322-19061378)
[»] chr6 (7 HSPs)
chr6 (7-121)||(21621648-21621762)
chr6 (7-121)||(22363745-22363859)
chr6 (7-121)||(25918201-25918315)
chr6 (7-121)||(33539758-33539872)
chr6 (67-121)||(32350603-32350657)
chr6 (7-63)||(11374419-11374475)
chr6 (7-63)||(29162078-29162134)
[»] chr1 (3 HSPs)
chr1 (10-121)||(17607460-17607571)
chr1 (7-121)||(17022080-17022194)
chr1 (7-63)||(33395889-33395945)
[»] chr8 (8 HSPs)
chr8 (7-121)||(15931839-15931953)
chr8 (11-121)||(17283781-17283891)
chr8 (7-107)||(29296424-29296524)
chr8 (7-83)||(23228856-23228931)
chr8 (7-72)||(26010006-26010071)
chr8 (7-64)||(17265456-17265513)
chr8 (7-64)||(19333195-19333252)
chr8 (10-63)||(25608691-25608744)
[»] chr7 (12 HSPs)
chr7 (7-121)||(16918098-16918212)
chr7 (7-121)||(17225468-17225582)
chr7 (7-121)||(34242677-34242791)
chr7 (19-121)||(48353850-48353952)
chr7 (7-121)||(16921488-16921602)
chr7 (7-121)||(9609757-9609870)
chr7 (7-121)||(9837329-9837442)
chr7 (67-121)||(4437379-4437433)
chr7 (67-121)||(4444780-4444834)
chr7 (67-121)||(33558223-33558277)
chr7 (11-63)||(12246523-12246575)
chr7 (19-92)||(12182746-12182819)
[»] chr2 (3 HSPs)
chr2 (7-121)||(40641844-40641958)
chr2 (7-121)||(9782478-9782592)
chr2 (41-91)||(19660889-19660939)
[»] scaffold0025 (1 HSPs)
scaffold0025 (7-121)||(51850-51964)
[»] scaffold0107 (1 HSPs)
scaffold0107 (7-121)||(11951-12065)
[»] scaffold0031 (1 HSPs)
scaffold0031 (7-121)||(98725-98839)
[»] scaffold1311 (1 HSPs)
scaffold1311 (8-121)||(252-365)
[»] scaffold0047 (1 HSPs)
scaffold0047 (7-121)||(1640-1754)
[»] scaffold0010 (1 HSPs)
scaffold0010 (7-121)||(29619-29733)
[»] chr4 (5 HSPs)
chr4 (7-121)||(18275330-18275444)
chr4 (7-121)||(19823993-19824107)
chr4 (7-107)||(42707287-42707386)
chr4 (7-107)||(7187479-7187578)
chr4 (67-121)||(38763310-38763364)
[»] scaffold0175 (1 HSPs)
scaffold0175 (7-107)||(6725-6824)
[»] scaffold0009 (1 HSPs)
scaffold0009 (7-85)||(68051-68129)
[»] scaffold0483 (1 HSPs)
scaffold0483 (8-98)||(5267-5357)
[»] scaffold0109 (1 HSPs)
scaffold0109 (8-98)||(50107-50197)
[»] scaffold0028 (1 HSPs)
scaffold0028 (9-93)||(64033-64116)
[»] scaffold0021 (3 HSPs)
scaffold0021 (7-89)||(23605-23686)
scaffold0021 (7-90)||(19340-19422)
scaffold0021 (7-90)||(28916-28998)
[»] scaffold0032 (1 HSPs)
scaffold0032 (7-91)||(106177-106260)
[»] chr5 (2 HSPs)
chr5 (43-121)||(21227926-21228004)
chr5 (7-46)||(21224259-21224298)


Alignment Details
Target: scaffold0006 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 198923 - 199037
Alignment:
Q  7 gtactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggtaccacatgcatgtaggtgtcggagttaagcgcatt 106  Q
    ||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  198923 gtactcttacatatgatgtgcggttggcatcatggggtaacggcctagacgttgttgtgcttggtaccacatgcatgtaggtgtcggagttaggcgcatt 199022  T
Q  107 gtataattaacatga 121  Q
    | |||||||||||||    
T  199023 gcataattaacatga 199037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 95; Significance: 1e-46; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 34558495 - 34558381
Alignment:
Q  7 gtactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggtaccacatgcatgtaggtgtcggagttaagcgcatt 106  Q
    ||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  34558495 gtactcttacatatgatgtgcggttggcatcatggggtaacggcctagacgttgttgtgcttggtaccacatgcatgtaggtgtcggagttaggcgcatt 34558396  T
Q  107 gtataattaacatga 121  Q
    | |||||||||||||    
T  34558395 gcataattaacatga 34558381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 15549153 - 15549039
Alignment:
Q  7 gtactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggtaccacatgcatgtaggtgtcggagttaagcgcatt 106  Q
    ||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  15549153 gtacttttacaaatgatgtgcggttggcatcatggggtaacggcctagacgttgttgtgcttggtaccacatgcatgtaggtgtcggtgttaggcgcatt 15549054  T
Q  107 gtataattaacatga 121  Q
      |||||||||||||    
T  15549053 acataattaacatga 15549039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 12020586 - 12020472
Alignment:
Q  7 gtactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggtaccacatgcatgtaggtgtcggagttaagcgcatt 106  Q
    ||||||||||| || |||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| | |||||    
T  12020586 gtactcttacatataatgtgcggttggcatcatggggtaacgacctagacgttgttgtgcttggtaccacatgcatgtaggtgtcggagttaggtgcatt 12020487  T
Q  107 gtataattaacatga 121  Q
    | |||||||| ||||    
T  12020486 gcataattaaaatga 12020472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 17203294 - 17203187
Alignment:
Q  14 tacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggtaccacatgcatgtaggtgtcggagttaagcgcattgtataat 113  Q
    |||| ||||||||||||||||||| ||||||||||   || ||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||    
T  17203294 tacatatgatgtgcggttggcatcatggggtaacgttctatacgttgttgtgcttggtaccacatgcatgtaggtgtcggagttagacgcattgcataat 17203195  T
Q  114 taacatga 121  Q
    ||||||||    
T  17203194 taacatga 17203187  T

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Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 17760002 - 17760058
Alignment:
Q  7 gtactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttg 63  Q
    ||||||||||| ||||||||| ||||||||| |||||| ||||| ||||||||||||    
T  17760002 gtactcttacatatgatgtgcagttggcatcatggggtgacggcctagacgttgttg 17760058  T

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Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 19061322 - 19061378
Alignment:
Q  7 gtactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttg 63  Q
    ||||||||||| ||||||||| ||||||||| |||||| ||||| ||||||||||||    
T  19061322 gtactcttacatatgatgtgcagttggcatcatggggtgacggcctagacgttgttg 19061378  T

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Target: chr6 (Bit Score: 91; Significance: 3e-44; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 21621762 - 21621648
Alignment:
Q  7 gtactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggtaccacatgcatgtaggtgtcggagttaagcgcatt 106  Q
    ||||||||||||||||||||||||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  21621762 gtactcttacaaatgatgtgcggttggaatcatggggtaacggcctagacgttgttgttcttggtaccacatgcatgtaggtgtcggagttaggcgcatt 21621663  T
Q  107 gtataattaacatga 121  Q
    | |||||||||||||    
T  21621662 gcataattaacatga 21621648  T

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Target: chr6; HSP #2
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 22363745 - 22363859
Alignment:
Q  7 gtactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggtaccacatgcatgtaggtgtcggagttaagcgcatt 106  Q
    ||||||||| | ||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  22363745 gtactcttatatatgatgtgcggttggcatcatggggtaacgacctagacgttgttgtgcttggtaccacatgcatgtaggtgtcggagttaggcgcatt 22363844  T
Q  107 gtataattaacatga 121  Q
    | |||||||||||||    
T  22363845 gcataattaacatga 22363859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 25918315 - 25918201
Alignment:
Q  7 gtactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggtaccacatgcatgtaggtgtcggagttaagcgcatt 106  Q
    ||||||||||||||||||| ||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| |||| |||| |||||||    
T  25918315 gtactcttacaaatgatgttcggttagcatcatggggtaacggcctagacgttgttgtgcttggtaccacatgcatgtaggtatcggtgttaggcgcatt 25918216  T
Q  107 gtataattaacatga 121  Q
    | |||||||| ||||    
T  25918215 gcataattaatatga 25918201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 33539758 - 33539872
Alignment:
Q  7 gtactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggtaccacatgcatgtaggtgtcggagttaagcgcatt 106  Q
    ||||||||||| ||||||||| ||||||||  |||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||| |||||||    
T  33539758 gtactcttacatatgatgtgcagttggcataatggggtaacggcctagacgttgttgtgcttggtaccacatgcatgtatgtgtcggaattaggcgcatt 33539857  T
Q  107 gtataattaacatga 121  Q
    | |||||||||||||    
T  33539858 gcataattaacatga 33539872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 67 - 121
Target Start/End: Complemental strand, 32350657 - 32350603
Alignment:
Q  67 ttggtaccacatgcatgtaggtgtcggagttaagcgcattgtataattaacatga 121  Q
    ||||||||||||||||||| |||||||| ||| |||||||| |||||||||||||    
T  32350657 ttggtaccacatgcatgtatgtgtcggaattaggcgcattgcataattaacatga 32350603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 11374419 - 11374475
Alignment:
Q  7 gtactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttg 63  Q
    ||||||||||| | ||||||  |||||||||||||||| ||||| || |||||||||    
T  11374419 gtactcttacataagatgtgttgttggcatcttggggtgacggcctatacgttgttg 11374475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 29162078 - 29162134
Alignment:
Q  7 gtactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttg 63  Q
    ||||||||||| | ||||||  |||||||||||||||| ||||| || |||||||||    
T  29162078 gtactcttacataagatgtgttgttggcatcttggggtgacggcctatacgttgttg 29162134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 2e-42; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 17607571 - 17607460
Alignment:
Q  10 ctcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggtaccacatgcatgtaggtgtcggagttaagcgcattgta 109  Q
    |||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| || ||||| |    
T  17607571 ctcttacaaatgatgtgcggttggcatcatggggtaacggcctagatgttgttgtgcttggtaccacatgcatgtaggtgtcggagttaggcacattgca 17607472  T
Q  110 taattaacatga 121  Q
    ||||||||||||    
T  17607471 taattaacatga 17607460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 17022194 - 17022080
Alignment:
Q  7 gtactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggtaccacatgcatgtaggtgtcggagttaagcgcatt 106  Q
    ||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||| |||||||    
T  17022194 gtactcttacatatgatgtgcggttggcatcatggggtaacggcctagacgttgttgtgctttgtaccacatgcatgtaggtgtcggtgttaggcgcatt 17022095  T
Q  107 gtataattaacatga 121  Q
    | |||||| ||||||    
T  17022094 gcataatttacatga 17022080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 33395945 - 33395889
Alignment:
Q  7 gtactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttg 63  Q
    ||||||||||| | |||||||  ||||||||||||||| ||||| ||||||||||||    
T  33395945 gtactcttacataagatgtgctattggcatcttggggtgacggcctagacgttgttg 33395889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 87; Significance: 7e-42; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 15931953 - 15931839
Alignment:
Q  7 gtactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggtaccacatgcatgtaggtgtcggagttaagcgcatt 106  Q
    ||||| ||||| ||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15931953 gtacttttacatatgatgtgctgttggcatcatggggtaacggcctagacgttgttgtgcttggtaccacatgcatgtaggtgtcggagttaggcgcatt 15931854  T
Q  107 gtataattaacatga 121  Q
    | |||||||||||||    
T  15931853 gcataattaacatga 15931839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 17283891 - 17283781
Alignment:
Q  11 tcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggtaccacatgcatgtaggtgtcggagttaagcgcattgtat 110  Q
    ||||||||||||||||| |||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||| |||||||| ||    
T  17283891 tcttacaaatgatgtgcagttgacatcatggggtaacggcctagacgttgttgtgcttggtaccacatgcatgtaggcgtcggtgttaggcgcattgcat 17283792  T
Q  111 aattaacatga 121  Q
    |||||||||||    
T  17283791 aattaacatga 17283781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 7 - 107
Target Start/End: Complemental strand, 29296524 - 29296424
Alignment:
Q  7 gtactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggtaccacatgcatgtaggtgtcggagttaagcgcatt 106  Q
    ||||||||||| ||||||||| ||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||| || ||| |||||||    
T  29296524 gtactcttacatatgatgtgcagttggcatcatggggtaacggcctagacgttgttgtgattggtaccacatgcatgtaggtgtcagatttaggcgcatt 29296425  T
Q  107 g 107  Q
    |    
T  29296424 g 29296424  T

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Target: chr8; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 7 - 83
Target Start/End: Original strand, 23228856 - 23228931
Alignment:
Q  7 gtactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggtaccacatgcatg 83  Q
    ||||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||    
T  23228856 gtactcttacatatgatgtgcggttggcatcatggg-taacggcctagacgttgttgtgcttggtaccacatgcatg 23228931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 26010071 - 26010006
Alignment:
Q  7 gtactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggta 72  Q
    ||||||||||| ||||||||| ||||||||| |||||||| ||| |||||||||||||||||||||    
T  26010071 gtactcttacatatgatgtgcagttggcatcatggggtaatggcctagacgttgttgtgcttggta 26010006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 17265513 - 17265456
Alignment:
Q  7 gtactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgt 64  Q
    ||||||||||| ||||||||| ||||||||| |||||| ||| | |||||||||||||    
T  17265513 gtactcttacatatgatgtgcagttggcatcctggggtgacgacctagacgttgttgt 17265456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 64
Target Start/End: Original strand, 19333195 - 19333252
Alignment:
Q  7 gtactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgt 64  Q
    ||||||||||| ||||||| | ||||||||| |||||| | ||| |||||||||||||    
T  19333195 gtactcttacatatgatgtacagttggcatcatggggtgaaggcctagacgttgttgt 19333252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 63
Target Start/End: Complemental strand, 25608744 - 25608691
Alignment:
Q  10 ctcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttg 63  Q
    |||||||| |||||||||  |||||||| ||| || ||||||||||||||||||    
T  25608744 ctcttacatatgatgtgcatttggcatcatggagtgacggcatagacgttgttg 25608691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 7e-42; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 16918212 - 16918098
Alignment:
Q  7 gtactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggtaccacatgcatgtaggtgtcggagttaagcgcatt 106  Q
    ||||||||||| |||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  16918212 gtactcttacatatgatgtgcggttgacatcatggggtaacggcctagacgttgttgtgcttggtaccacatgcatttaggtgtcggagttaggcgcatt 16918113  T
Q  107 gtataattaacatga 121  Q
    | |||||||||||||    
T  16918112 gcataattaacatga 16918098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 17225468 - 17225582
Alignment:
Q  7 gtactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggtaccacatgcatgtaggtgtcggagttaagcgcatt 106  Q
    ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||  | |||| |||||||    
T  17225468 gtactcttacaaatgatgtgcggttggcatcatggggtaacggcctagacgttgttgtgcttggtaccacatgcatgtaggtgttagtgttaggcgcatt 17225567  T
Q  107 gtataattaacatga 121  Q
    | |||||||||||||    
T  17225568 gcataattaacatga 17225582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 34242677 - 34242791
Alignment:
Q  7 gtactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggtaccacatgcatgtaggtgtcggagttaagcgcatt 106  Q
    ||||||||||| ||||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| | |||||    
T  34242677 gtactcttacatatgatgtgctgttggcatcatggggtaacggcctagacgttgttgtgcttggtaccacatgcatgtatgtgtcggagttaggtgcatt 34242776  T
Q  107 gtataattaacatga 121  Q
    | |||||||||||||    
T  34242777 gcataattaacatga 34242791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 121
Target Start/End: Complemental strand, 48353952 - 48353850
Alignment:
Q  19 atgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggtaccacatgcatgtaggtgtcggagttaagcgcattgtataattaaca 118  Q
    ||||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  48353952 atgatgtgcggttggcatcatggggtaatggcctagacgttgttgtgcttggtaccacatgcatgtaggtgtcggagttaggcgcattgcataattaaca 48353853  T
Q  119 tga 121  Q
    |||    
T  48353852 tga 48353850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 16921488 - 16921602
Alignment:
Q  7 gtactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggtaccacatgcatgtaggtgtcggagttaagcgcatt 106  Q
    ||||||||||| | |||||| |||||||||| |||||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  16921488 gtactcttacatacgatgtgtggttggcatcatggggtaacgacctagacattgttgtgcttggtaccacatgcatgtaggtgtcggagttaggcgcatt 16921587  T
Q  107 gtataattaacatga 121  Q
    | |||||||||||||    
T  16921588 gcataattaacatga 16921602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 9609870 - 9609757
Alignment:
Q  7 gtactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggtaccacatgcatgtaggtgtcggagttaagcgcatt 106  Q
    ||||||||||| ||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||| ||||||| ||||||| |||| |||||||    
T  9609870 gtactcttacatatgatgtgcggttggcatcatggggtaacggtctagacgttgttgtgcttggtaccacaagcatgtaagtgtcgg-gttaggcgcatt 9609772  T
Q  107 gtataattaacatga 121  Q
    | |||| ||||||||    
T  9609771 gcataactaacatga 9609757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 9837442 - 9837329
Alignment:
Q  7 gtactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggtaccacatgcatgtaggtgtcggagttaagcgcatt 106  Q
    ||||||||||| ||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||| ||||||| ||||||| |||| |||||||    
T  9837442 gtactcttacatatgatgtgcggttggcatcatggggtaacggtctagacgttgttgtgcttggtaccacaagcatgtaagtgtcgg-gttaggcgcatt 9837344  T
Q  107 gtataattaacatga 121  Q
    | |||| ||||||||    
T  9837343 gcataactaacatga 9837329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 67 - 121
Target Start/End: Complemental strand, 4437433 - 4437379
Alignment:
Q  67 ttggtaccacatgcatgtaggtgtcggagttaagcgcattgtataattaacatga 121  Q
    ||||||||||||||||||| |||||||| ||| |||||||| |||||||||||||    
T  4437433 ttggtaccacatgcatgtatgtgtcggaattaggcgcattgcataattaacatga 4437379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 67 - 121
Target Start/End: Complemental strand, 4444834 - 4444780
Alignment:
Q  67 ttggtaccacatgcatgtaggtgtcggagttaagcgcattgtataattaacatga 121  Q
    ||||||||||||||||||| |||||||| ||| |||||||| |||||||||||||    
T  4444834 ttggtaccacatgcatgtatgtgtcggaattaggcgcattgcataattaacatga 4444780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 67 - 121
Target Start/End: Complemental strand, 33558277 - 33558223
Alignment:
Q  67 ttggtaccacatgcatgtaggtgtcggagttaagcgcattgtataattaacatga 121  Q
    ||||||||||||||||||| |||||||| ||| |||||||| |||||||| ||||    
T  33558277 ttggtaccacatgcatgtatgtgtcggaattaggcgcattgcataattaatatga 33558223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 63
Target Start/End: Complemental strand, 12246575 - 12246523
Alignment:
Q  11 tcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttg 63  Q
    ||||||| ||||||||| ||||||||| |||||| ||||| ||||||||||||    
T  12246575 tcttacatatgatgtgcagttggcatcatggggtgacggcctagacgttgttg 12246523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 12182819 - 12182746
Alignment:
Q  19 atgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggtaccacatgcatgtaggtgtcg 92  Q
    ||||||||  ||||||||| |||||| ||| | ||||||||||||    |||||||||||||||||||| ||||    
T  12182819 atgatgtgttgttggcatcatggggtgacgacctagacgttgttggtgatggtaccacatgcatgtaggagtcg 12182746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 7e-42; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 40641844 - 40641958
Alignment:
Q  7 gtactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggtaccacatgcatgtaggtgtcggagttaagcgcatt 106  Q
    |||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||| |||||||    
T  40641844 gtactcttacaagtgatgtgcggttggcatcatggggtaacggcgtagacgttgttgtgcttgataccacatgcatgtaggtgtcggtgttaggcgcatt 40641943  T
Q  107 gtataattaacatga 121  Q
    | |||||||||||||    
T  40641944 gcataattaacatga 40641958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 9782478 - 9782592
Alignment:
Q  7 gtactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggtaccacatgcatgtaggtgtcggagttaagcgcatt 106  Q
    ||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||| |||||| ||||  ||||||    
T  9782478 gtactattacaaatgatgtgcggttggcatcatggggtaacggcctagacgttgttgtgtttggtaccacatgcatgtagttgtcggtgttagacgcatt 9782577  T
Q  107 gtataattaacatga 121  Q
    | |||||||||||||    
T  9782578 gcataattaacatga 9782592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 19660939 - 19660889
Alignment:
Q  41 gggtaacggcatagacgttgttgtgcttggtaccacatgcatgtaggtgtc 91  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  19660939 gggtaacggcctagacgttgttgtgcttggtaccacatgcatgtaggtgtc 19660889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 51964 - 51850
Alignment:
Q  7 gtactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggtaccacatgcatgtaggtgtcggagttaagcgcatt 106  Q
    |||||||||||| |||||||||||||||||| |||||||||||| ||||| ||||||||||||||| |||||||||||||||||||| |||| |||||||    
T  51964 gtactcttacaactgatgtgcggttggcatcatggggtaacggcctagacattgttgtgcttggtatcacatgcatgtaggtgtcggtgttaggcgcatt 51865  T
Q  107 gtataattaacatga 121  Q
    | |||||||||||||    
T  51864 gcataattaacatga 51850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 12065 - 11951
Alignment:
Q  7 gtactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggtaccacatgcatgtaggtgtcggagttaagcgcatt 106  Q
    ||||||||||| |||||||| |||||||| | |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  12065 gtactcttacatatgatgtgtggttggcaacatggggtaacgacctagacgttgttgtgcttggtaccacatgcatgtaggtgtcggagttaggcgcatt 11966  T
Q  107 gtataattaacatga 121  Q
    | |||||| ||||||    
T  11965 gcataattgacatga 11951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 98725 - 98839
Alignment:
Q  7 gtactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggtaccacatgcatgtaggtgtcggagttaagcgcatt 106  Q
    ||||||||||| ||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||| || ||||    
T  98725 gtactcttacatatgatgtgcggttggcatcatggggtaacagcctagacgttgttgtgcttggtaccacatgcatgtatgtgtcggagttaggcacatt 98824  T
Q  107 gtataattaacatga 121  Q
    | ||||||| |||||    
T  98825 gcataattagcatga 98839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1311 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold1311
Description:

Target: scaffold1311; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 8 - 121
Target Start/End: Complemental strand, 365 - 252
Alignment:
Q  8 tactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggtaccacatgcatgtaggtgtcggagttaagcgcattg 107  Q
    |||||||||||||||||||| ||||||||| || ||||||| | |||||||||||||||||||||||||||||||||||||||||| |||| |||||||     
T  365 tactcttacaaatgatgtgcagttggcatcatgaggtaacgacctagacgttgttgtgcttggtaccacatgcatgtaggtgtcggtgttaggcgcatta 266  T
Q  108 tataattaacatga 121  Q
     |||||||||||||    
T  265 cataattaacatga 252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 1640 - 1754
Alignment:
Q  7 gtactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggtaccacatgcatgtaggtgtcggagttaagcgcatt 106  Q
    ||||||||||| |||||||||||||||||||  |||||| |||| |||||||||||||||||||||||||||||||||||||||  |||||| |||||||    
T  1640 gtactcttacatatgatgtgcggttggcatcaaggggtatcggcctagacgttgttgtgcttggtaccacatgcatgtaggtgtgagagttaggcgcatt 1739  T
Q  107 gtataattaacatga 121  Q
    | |||||| ||||||    
T  1740 gcataattcacatga 1754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 29733 - 29619
Alignment:
Q  7 gtactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggtaccacatgcatgtaggtgtcggagttaagcgcatt 106  Q
    ||||||||||| |||||||| |||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||  || |||| |||||||    
T  29733 gtactcttacatatgatgtgtggttggcatcatggggtaacggcctagacgttgttgttcttggtaccacatgcatgtaggtgctggtgttaggcgcatt 29634  T
Q  107 gtataattaacatga 121  Q
    | |||||| ||||||    
T  29633 gcataatttacatga 29619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 3e-32; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 7 - 121
Target Start/End: Complemental strand, 18275444 - 18275330
Alignment:
Q  7 gtactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggtaccacatgcatgtaggtgtcggagttaagcgcatt 106  Q
    ||||||||||| |||||||||||||| |||| ||  ||||| || ||||||||||||||||||||||||||||||||||| |||| |||||| |||||||    
T  18275444 gtactcttacatatgatgtgcggttgacatcatgttgtaacagcctagacgttgttgtgcttggtaccacatgcatgtagctgtcagagttaggcgcatt 18275345  T
Q  107 gtataattaacatga 121  Q
    | |||||||||||||    
T  18275344 gcataattaacatga 18275330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 7 - 121
Target Start/End: Original strand, 19823993 - 19824107
Alignment:
Q  7 gtactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggtaccacatgcatgtaggtgtcggagttaagcgcatt 106  Q
    |||||||||||||| |||||||||||||||| |||||| ||| | ||||||||||||||||||||||||||| |||||  ||||||| |||| |||||||    
T  19823993 gtactcttacaaatcatgtgcggttggcatcatggggtgacgtcctagacgttgttgtgcttggtaccacatacatgttagtgtcggtgttaggcgcatt 19824092  T
Q  107 gtataattaacatga 121  Q
    | |||||||||||||    
T  19824093 gcataattaacatga 19824107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 107
Target Start/End: Complemental strand, 42707386 - 42707287
Alignment:
Q  7 gtactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggtaccacatgcatgtaggtgtcggagttaagcgcatt 106  Q
    ||||||||||| ||||||||||||||||||| |||| ||||||  ||||||||||||||||||||||||||||||||||||||||| | ||| |||||||    
T  42707386 gtactcttacatatgatgtgcggttggcatcatggg-taacggactagacgttgttgtgcttggtaccacatgcatgtaggtgtcgtatttaggcgcatt 42707288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 7 - 107
Target Start/End: Original strand, 7187479 - 7187578
Alignment:
Q  7 gtactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggtaccacatgcatgtaggtgtcggagttaagcgcatt 106  Q
    ||||||||||| |||||||| ||||| |||| |||| ||||||| ||||| ||||||||||||||||||||||||||||||||| ||| ||| ||| |||    
T  7187479 gtactcttacatatgatgtgtggttgacatcatggg-taacggcctagacattgttgtgcttggtaccacatgcatgtaggtgttggaattaggcgtatt 7187577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 67 - 121
Target Start/End: Complemental strand, 38763364 - 38763310
Alignment:
Q  67 ttggtaccacatgcatgtaggtgtcggagttaagcgcattgtataattaacatga 121  Q
    |||||||||||||||| || |||||||| ||| |||||||| |||||||||||||    
T  38763364 ttggtaccacatgcatatatgtgtcggaattaggcgcattgcataattaacatga 38763310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 7 - 107
Target Start/End: Original strand, 6725 - 6824
Alignment:
Q  7 gtactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggtaccacatgcatgtaggtgtcggagttaagcgcatt 106  Q
    ||||||||||| |||||||||||||| |||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  6725 gtactcttacatatgatgtgcggttgacatcatggg-taacggcctagacgttgttgtgcttggtaccacatgcatgtaggtgtcggaattaggcgcatt 6823  T

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Target: scaffold0009 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 7 - 85
Target Start/End: Complemental strand, 68129 - 68051
Alignment:
Q  7 gtactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggtaccacatgcatgta 85  Q
    ||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  68129 gtactcttacatatgatgtgcggttggcatcatggggtaacggcctagacgttgttgtgcttggtaccacatgcatgta 68051  T

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Target: scaffold0483 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 5357 - 5267
Alignment:
Q  8 tactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggtaccacatgcatgtaggtgtcggagtta 98  Q
    ||||||||||||||||||| | |||||||| |||||||||||| ||||||||||||||||| |||| ||||||||||||||||||| ||||    
T  5357 tactcttacaaatgatgtgtgattggcatcatggggtaacggcctagacgttgttgtgctttgtactacatgcatgtaggtgtcggtgtta 5267  T

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Target: scaffold0109 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 50197 - 50107
Alignment:
Q  8 tactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggtaccacatgcatgtaggtgtcggagtta 98  Q
    ||||||||||||||||||| | |||||||| |||||||||||| ||||||||||||||||| |||| ||||||||||||||||||| ||||    
T  50197 tactcttacaaatgatgtgtgattggcatcatggggtaacggcctagacgttgttgtgctttgtactacatgcatgtaggtgtcggtgtta 50107  T

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Target: scaffold0028 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 64033 - 64116
Alignment:
Q  9 actcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggtaccacatgcatgtaggtgtcgg 93  Q
    ||||||||| ||||||||||||||||||| |||| ||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  64033 actcttacatatgatgtgcggttggcatcatggg-taacggcctagacgttgttgcgcttggtaccacatgcatgtaggtgtcgg 64116  T

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Target: scaffold0021 (Bit Score: 55; Significance: 9e-23; HSPs: 3)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 23605 - 23686
Alignment:
Q  7 gtactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggtaccacatgcatgtaggtg 89  Q
    ||||||||||| ||||||||||||||||||| |||| ||||||| ||||||||||||| ||| ||||||||||||||||||||    
T  23605 gtactcttacatatgatgtgcggttggcatcatggg-taacggcctagacgttgttgtacttagtaccacatgcatgtaggtg 23686  T

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Target: scaffold0021; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 19340 - 19422
Alignment:
Q  7 gtactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggtaccacatgcatgtaggtgt 90  Q
    ||||| ||||| | ||||||||||| | ||| |||| ||||||| ||||||||||||||||||||||| |||| ||||||||||    
T  19340 gtacttttacatacgatgtgcggttagtatcatggg-taacggcctagacgttgttgtgcttggtaccgcatgtatgtaggtgt 19422  T

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Target: scaffold0021; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 7 - 90
Target Start/End: Original strand, 28916 - 28998
Alignment:
Q  7 gtactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggtaccacatgcatgtaggtgt 90  Q
    ||||| ||||| | ||||||||||| | ||| |||| ||||||| ||||||||||||||||||||||| |||| ||||||||||    
T  28916 gtacttttacatacgatgtgcggttagtatcatggg-taacggcctagacgttgttgtgcttggtaccgcatgtatgtaggtgt 28998  T

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Target: scaffold0032 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 7 - 91
Target Start/End: Original strand, 106177 - 106260
Alignment:
Q  7 gtactcttacaaatgatgtgcggttggcatcttggggtaacggcatagacgttgttgtgcttggtaccacatgcatgtaggtgtc 91  Q
    ||||||||||| ||||||||  ||||||||| |||| ||||| | ||||||||||||||||||||||||||||||||||||||||    
T  106177 gtactcttacatatgatgtgtagttggcatcatggg-taacgacctagacgttgttgtgcttggtaccacatgcatgtaggtgtc 106260  T

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Target: chr5 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 21227926 - 21228004
Alignment:
Q  43 gtaacggcatagacgttgttgtgcttggtaccacatgcatgtaggtgtcggagttaagcgcattgtataattaacatga 121  Q
    |||| ||| ||||||||||||||||||||||||||||||||||| | || |||||| |||||||| |||||||||||||    
T  21227926 gtaatggcctagacgttgttgtgcttggtaccacatgcatgtagatatcagagttaggcgcattgcataattaacatga 21228004  T

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Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 21224259 - 21224298
Alignment:
Q  7 gtactcttacaaatgatgtgcggttggcatcttggggtaa 46  Q
    ||||||||||| ||||||||||||||||||| ||||||||    
T  21224259 gtactcttacatatgatgtgcggttggcatcatggggtaa 21224298  T

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