View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10151A_low_231 (Length: 230)
Name: NF10151A_low_231
Description: NF10151A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10151A_low_231 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 8694626 - 8694409
Alignment:
| Q |
1 |
aacatttgcaaagcttatttaagtgcaacctaaacctattcaatctaaagagcgtgtcgttgaaaagatgtccgatgttgatctccctatttcaactgtc |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
8694626 |
aacatttgcaaagcttatttaagtgcaacctaaacctattcaatctaaagagcgtgtcgttgaaaagatgtccgatgttgatctccctatttc----gtc |
8694531 |
T |
|
| Q |
101 |
aactgctcgaagcctagtgttgttggagacactgaaaataattgattgcgagcttcttgaaaacataataattgatgtaagaaaaggggaggaatcgaga |
200 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8694530 |
aactgctcgaagcctattgttgttggagacactgaaaataattgattgc--gcttcttgaaaacataataattgatgtaagaaaaggggaggaatcgaga |
8694433 |
T |
|
| Q |
201 |
ggtgaaatagttgatgatgataat |
224 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
8694432 |
ggtgaaatagttgatgatgataat |
8694409 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 146; Significance: 5e-77; HSPs: 15)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 28130121 - 28130338
Alignment:
| Q |
1 |
aacatttgcaaagcttatttaagtgcaacctaaacctattcaatctaaagagcgtgtcgttgaaaagatgtccgatgttgatctccctatttcaactgtc |
100 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |||| |||||||||||||||||||| |||||||| |
|
|
| T |
28130121 |
aacatttgaaaagcttatttaagtgcaacctaaacctattcaatctaaagagtgtgttattgaaaggatgcccgatgttgatctccctattacaactgtc |
28130220 |
T |
|
| Q |
101 |
aactgctcgaagcctagtgttgttggagacactgaaaataattgattgcgagcttcttgaaaacataataattgatgtaagaaaaggggaggaatcgaga |
200 |
Q |
| |
|
||||||| |||||||||||||||||||| ||| |||||||||| || ||||||||||||||||||||||| |||| |||||||||| ||||||||||| |
|
|
| T |
28130221 |
aactgctgttagcctagtgttgttggagacgctggaaataattgactgtgagcttcttgaaaacataataatagatgaaagaaaagggcaggaatcgaga |
28130320 |
T |
|
| Q |
201 |
ggtgaaatagttgatgat |
218 |
Q |
| |
|
||||||||||| |||||| |
|
|
| T |
28130321 |
ggtgaaatagtcgatgat |
28130338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 28079575 - 28079797
Alignment:
| Q |
1 |
aacatttgcaaagcttatttaagtgcaacctaaacctattcaatctaaagagcgtgtcgttgaaaagatgtccgatgttgatctccctatttcaactgtc |
100 |
Q |
| |
|
|||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||| |||| ||||||||||||||||||||||||||||| |
|
|
| T |
28079575 |
aacatttgaaaagcttatttaagtgcaaactaaacctattcaatctaaagagtgtgtcattgaaaggatgcccgatgttgatctccctatttcaactgtc |
28079674 |
T |
|
| Q |
101 |
aactgctcgaagcctagtgttgttggagacactgaaaataattgattgcgagcttcttgaaaacataataattgatgtaagaaaaggggaggaatcgaga |
200 |
Q |
| |
|
||||||| ||||||||||||||||||| | || ||||| || || ||| |||||||||||||||||| |||| |||||||||| ||||||| ||| |
|
|
| T |
28079675 |
aactgctgttagcctagtgttgttggagagattggaaatacaggactgtgagggtcttgaaaacataataatagatgaaagaaaagggaaggaatcaaga |
28079774 |
T |
|
| Q |
201 |
ggtgaaatagttgatgatgataa |
223 |
Q |
| |
|
|||||||||||||||||| |||| |
|
|
| T |
28079775 |
ggtgaaatagttgatgataataa |
28079797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 27998749 - 27998956
Alignment:
| Q |
1 |
aacatttgcaaagcttatttaagtgcaacctaaacctattcaatctaaagagcgtgtcgttgaaaagatgtccgatgttgatctccctatttcaactgtc |
100 |
Q |
| |
|
|||||||| ||||||||||||||||||| |||||||||||||||||||||||||||| | || || |||| ||||||||||||||||||||||||||||| |
|
|
| T |
27998749 |
aacatttgaaaagcttatttaagtgcaaactaaacctattcaatctaaagagcgtgttgctggaaggatgcccgatgttgatctccctatttcaactgtc |
27998848 |
T |
|
| Q |
101 |
aactgctcgaagcctagtgttgttggagacactgaaaataattgattgcgagcttcttgaaaacataataattgatgtaagaaaaggggaggaatcgaga |
200 |
Q |
| |
|
||||||| ||||||||||||||||||| | || ||||| || || ||| ||||||||||||||||||||||| |||||||||| ||||||| ||| |
|
|
| T |
27998849 |
aactgctgttagcctagtgttgttggagagattggtaataaaggactgtgagggtcttgaaaacataataattgatgaaagaaaagggaaggaatcaaga |
27998948 |
T |
|
| Q |
201 |
ggtgaaat |
208 |
Q |
| |
|
|||||||| |
|
|
| T |
27998949 |
ggtgaaat |
27998956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 28144049 - 28144256
Alignment:
| Q |
1 |
aacatttgcaaagcttatttaagtgcaacctaaacctattcaatctaaagagcgtgtcgttgaaaagatgtccgatgttgatctccctatttcaactgtc |
100 |
Q |
| |
|
|||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||| |||||| |||| ||||||||||||||||||||||||||||| |
|
|
| T |
28144049 |
aacatttgaaaagcttatttaagtgcaaactaaacctattcaatctaaagagattgtcattgaaaggatgcccgatgttgatctccctatttcaactgtc |
28144148 |
T |
|
| Q |
101 |
aactgctcgaagcctagtgttgttggagacactgaaaataattgattgcgagcttcttgaaaacataataattgatgtaagaaaaggggaggaatcgaga |
200 |
Q |
| |
|
||||| | ||||||||||||||||||| | ||||||||| ||||| ||| |||||||||||||||||| | || |||||||||| ||||||| ||| |
|
|
| T |
28144149 |
aactgttgttagcctagtgttgttggagagattgaaaataaaggattgtgagggtcttgaaaacataataataggtgaaagaaaagggaaggaatcaaga |
28144248 |
T |
|
| Q |
201 |
ggtgaaat |
208 |
Q |
| |
|
|||||||| |
|
|
| T |
28144249 |
ggtgaaat |
28144256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 11408968 - 11409179
Alignment:
| Q |
4 |
atttgcaaagcttatttaagtgcaacctaaacctattcaatctaaagagcgtgtcgttgaaaagatgtccgatgttgatctccctatttcaactgtcaac |
103 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||| |
|
|
| T |
11408968 |
atttgaaaagcttatttaagtgcaacctaaacctattcaatctaaagagcgtgttgttgaaaagatgcccgatgttgatctccctgtttcaactgtcaac |
11409067 |
T |
|
| Q |
104 |
tgctcgaagcctagtgttgttggagacactgaaaataattgattgcgagcttcttgaaaacataataattgatgtaagaaaaggggaggaatcgagaggt |
203 |
Q |
| |
|
|||| ||||||||||||||||||| | || |||||| ||| || | ||||||| |||||||| |||| ||| || | |||||||| ||||||| |
|
|
| T |
11409068 |
tgctgttagcctagtgttgttggagagattggaaataaatgactgtggatgtcttgaatacataata---gatgaaaggaacgaggaggaattgagaggt |
11409164 |
T |
|
| Q |
204 |
gaaatagttgatgat |
218 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
11409165 |
gaaatagttgatgat |
11409179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 28047588 - 28047807
Alignment:
| Q |
1 |
aacatttgcaaagcttatttaagtgcaacctaaacctattcaatctaaagagcgtgtcgttgaaaagatgtccgatgttgatctccctatttcaactgtc |
100 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||| || |||| ||||||||||||||||||||||||||||| |
|
|
| T |
28047588 |
aacatttgaaaagcttatttaagtgcaacctaaacctattcaatctaaagagtgtatcgttggaaggatgcccgatgttgatctccctatttcaactgtc |
28047687 |
T |
|
| Q |
101 |
aactgctcgaagcctagtgttgttggagacactgaaaataattgattgcgagcttcttgaaaacataataattgatgtaagaaaaggggaggaatcgaga |
200 |
Q |
| |
|
||||||| |||||||||| |||||||| | || ||||| ||| || | ||||||| |||||||| |||| |||||||| | ||||||||||| |
|
|
| T |
28047688 |
aactgctgttagcctagtgtcgttggagagattggaaatagatgactgtggatgtcttgaatacataata---gatgaaagaaaagagcaggaatcgaga |
28047784 |
T |
|
| Q |
201 |
ggtgaaatagttgatgatgataa |
223 |
Q |
| |
|
|||||||||||||||||| |||| |
|
|
| T |
28047785 |
ggtgaaatagttgatgataataa |
28047807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 27909969 - 27910145
Alignment:
| Q |
1 |
aacatttgcaaagcttatttaagtgcaacctaaacctattcaatctaaagagcgtgtcgttgaaaagatgtccgatgttgatctccctatttcaactgtc |
100 |
Q |
| |
|
|||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||| |||||||||||| |||||||||||||||| |
|
|
| T |
27909969 |
aacatttgaaaagcttatttaagtgcaaactaaacctattcaatctaaagagtgtgtcgttggaaagatgcccgatgttgatcgccctatttcaactgtc |
27910068 |
T |
|
| Q |
101 |
aactgctcgaagcctagtgttgttggagacactgaaaataattgattgcgagcttcttgaaaacataataattgatg |
177 |
Q |
| |
|
||||||| ||||||||||||||||||| | || ||||| ||| || ||| |||||||||||||||||| |||| |
|
|
| T |
27910069 |
aactgctgttagcctagtgttgttggagagattggaaatatatgactgtgagggtcttgaaaacataataatagatg |
27910145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 17749269 - 17749055
Alignment:
| Q |
1 |
aacatttgcaaagcttatttaagtgcaacctaaacctattcaatctaaagagcgtgtcgttgaaaagatgtccgatgttgatctccctatttcaactgtc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||| ||| ||||||||||| ||| ||||||| ||||| |
|
|
| T |
17749269 |
aacatttgcaaagcttatttaagtgcaacctaaacctattcaatctaaagagtgtgtcgctggaaaaatgcccgatgttgatgtccttatttcatctgtc |
17749170 |
T |
|
| Q |
101 |
aactgctcgaagcctagtgttgttggagacactgaaaataattgattgcgagcttcttgaaaacataataattgatgtaagaaaaggggaggaatcgaga |
200 |
Q |
| |
|
||||||| ||||||||||||||||||| | || ||||| || || | ||||||| |||||||| |||| |||||||||||||||||| ||| |
|
|
| T |
17749169 |
aactgctgttagcctagtgttgttggagagattggaaatagaggactgtggatgtcttgaatacataata---gatgaaagaaaaggggaggaatcaaga |
17749073 |
T |
|
| Q |
201 |
ggtgaaatagttgatgat |
218 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
17749072 |
ggtgaaatagttgatgat |
17749055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 19050589 - 19050375
Alignment:
| Q |
1 |
aacatttgcaaagcttatttaagtgcaacctaaacctattcaatctaaagagcgtgtcgttgaaaagatgtccgatgttgatctccctatttcaactgtc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||| ||| ||||||||||| ||| ||||||| ||||| |
|
|
| T |
19050589 |
aacatttgcaaagcttatttaagtgcaacctaaacctattcaatctaaagagtgtgtcgctggaaaaatgcccgatgttgatgtccttatttcatctgtc |
19050490 |
T |
|
| Q |
101 |
aactgctcgaagcctagtgttgttggagacactgaaaataattgattgcgagcttcttgaaaacataataattgatgtaagaaaaggggaggaatcgaga |
200 |
Q |
| |
|
||||||| ||||||||||||||||||| | || ||||| || || | ||||||| |||||||| |||| |||||||||||||||||| ||| |
|
|
| T |
19050489 |
aactgctgttagcctagtgttgttggagagattggaaatagaggactgtggatgtcttgaatacataata---gatgaaagaaaaggggaggaatcaaga |
19050393 |
T |
|
| Q |
201 |
ggtgaaatagttgatgat |
218 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
19050392 |
ggtgaaatagttgatgat |
19050375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 28178198 - 28178413
Alignment:
| Q |
1 |
aacatttgcaaagcttatttaagtgcaacctaaacctattcaatctaaagagcgtgtcgttgaaaagatgtccgatgttgatctccctatttcaactgtc |
100 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||| | |||||||||||| | || ||| || ||| ||||||||||| ||||||||||||||||| |
|
|
| T |
28178198 |
aacatttaaaaagcttatttaagtgcaacctaaacctctgcaatctaaagagtctttcattggaagaatgcccgatgttgatatccctatttcaactgtc |
28178297 |
T |
|
| Q |
101 |
aactgctcgaagcctagtgttgttggagacactgaaaataattgattgcgagcttcttgaaaacataataattgatgtaagaaaaggggaggaatcgaga |
200 |
Q |
| |
|
||||| | ||||||||||||||||||| |||| ||||||||||||| |||| ||||||||||||||||| | || || ||| ||||| |||| |||| |
|
|
| T |
28178298 |
aactgttgttagcctagtgttgttggagaaactggaaataattgattgtgagcgccttgaaaacataataatagttgaaaaaaacggggacgaattgaga |
28178397 |
T |
|
| Q |
201 |
ggtgaaatagttgatg |
216 |
Q |
| |
|
||||||||| |||||| |
|
|
| T |
28178398 |
ggtgaaataattgatg |
28178413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 27963039 - 27963133
Alignment:
| Q |
1 |
aacatttgcaaagcttatttaagtgcaacctaaacctattcaatctaaagagcgtgtcgttgaaaagatgtccgatgttgatctccctatttcaa |
95 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||| || |||| |||||||||||||||| ||||||| |
|
|
| T |
27963039 |
aacatttgaaaagcttatttaagtgcaacctaaacctattcaatctaaagagtgtgtcattggaaggatgcccgatgttgatctccccatttcaa |
27963133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 28472255 - 28472041
Alignment:
| Q |
1 |
aacatttgcaaagcttatttaagtgcaacctaaacctattcaatctaaagagcgtgtcgttgaaaagatgtccgatgttgatctccctatttcaactgtc |
100 |
Q |
| |
|
|||||||| ||| ||||||| |||||||| ||||||| | |||||||||||| | || ||| | |||| ||||||||||||||| |||||||| |||| |
|
|
| T |
28472255 |
aacatttgaaaatcttatttgagtgcaacataaacctctgcaatctaaagagtctttcattggtacgatgcccgatgttgatctccatatttcaaatgtc |
28472156 |
T |
|
| Q |
101 |
aactgctcgaagcctagtgttgttggagacactgaaaataattgattgcgagcttcttgaaaacataataattgatgtaagaaaaggggaggaatcgaga |
200 |
Q |
| |
|
||||||| | ||||| |||||||||||| | || ||||| ||| || ||| ||||||| |||||||| |||| ||||||| || ||||||||||| |
|
|
| T |
28472155 |
aactgcttgtagcctgatgttgttggagagattggaaatatatgactgtgagggtcttgaatacataata---gatgaaagaaaatggcaggaatcgaga |
28472059 |
T |
|
| Q |
201 |
ggtgaaatagttgatgat |
218 |
Q |
| |
|
|| |||||||||||||| |
|
|
| T |
28472058 |
agtaaaatagttgatgat |
28472041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 28492296 - 28492082
Alignment:
| Q |
1 |
aacatttgcaaagcttatttaagtgcaacctaaacctattcaatctaaagagcgtgtcgttgaaaagatgtccgatgttgatctccctatttcaactgtc |
100 |
Q |
| |
|
|||||||| ||| ||||||| |||||||| ||||||| | |||||||||||| | || ||| | |||| ||||||||||||||| |||||||| |||| |
|
|
| T |
28492296 |
aacatttgaaaatcttatttgagtgcaacataaacctctgcaatctaaagagtctttcattggtacgatgcccgatgttgatctccatatttcaattgtc |
28492197 |
T |
|
| Q |
101 |
aactgctcgaagcctagtgttgttggagacactgaaaataattgattgcgagcttcttgaaaacataataattgatgtaagaaaaggggaggaatcgaga |
200 |
Q |
| |
|
||||||| | ||||| |||||||||||| | || ||||| ||| || ||| ||||||| |||||||| |||| ||||||| || ||||||||||| |
|
|
| T |
28492196 |
aactgcttgtagcctgatgttgttggagagattggaaatatatgactgtgagggtcttgaatacataata---gatgaaagaaaatggcaggaatcgaga |
28492100 |
T |
|
| Q |
201 |
ggtgaaatagttgatgat |
218 |
Q |
| |
|
|| |||||||||||||| |
|
|
| T |
28492099 |
agtaaaatagttgatgat |
28492082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 218
Target Start/End: Complemental strand, 28513273 - 28513063
Alignment:
| Q |
5 |
tttgcaaagcttatttaagtgcaacctaaacctattcaatctaaagagcgtgtcgttgaaaagatgtccgatgttgatctccctatttcaactgtcaact |
104 |
Q |
| |
|
|||| ||| |||||| |||||||| ||||||| | |||||||||||| | || ||| || |||| ||||||||||||||| ||||||||||||||||| |
|
|
| T |
28513273 |
tttgaaaatcttattcgagtgcaacataaacctctgcaatctaaagagtctttcattggaacgatgcccgatgttgatctccatatttcaactgtcaact |
28513174 |
T |
|
| Q |
105 |
gctcgaagcctagtgttgttggagacactgaaaataattgattgcgagcttcttgaaaacataataattgatgtaagaaaaggggaggaatcgagaggtg |
204 |
Q |
| |
|
||| | ||||| |||||||||||| | || ||||| ||| || ||| ||||||| |||||||| |||| ||||||| || ||||||||||| || |
|
|
| T |
28513173 |
gcttgtagcctgatgttgttggagagattggaaatatatgactgtgagggtcttgaatacataata---gatgaaagaaaatggcaggaatcgagaagta |
28513077 |
T |
|
| Q |
205 |
aaatagttgatgat |
218 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
28513076 |
aaatagttgatgat |
28513063 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 27464303 - 27464176
Alignment:
| Q |
1 |
aacatttgcaaagcttatttaagtgcaacctaaacctattcaatctaaagagcgtgtcgttgaaaagatgtccgatgttgatctccctatttcaactgtc |
100 |
Q |
| |
|
|||||||||| ||||||||||||||||| |||||||| | |||| | ||||| ||| | ||| | |||| || |||||| |||||||||||||| ||| |
|
|
| T |
27464303 |
aacatttgcagagcttatttaagtgcaagctaaacctctgcaatttgaagagtgtgacattggagggatgcccattgttgacctccctatttcaaccgtc |
27464204 |
T |
|
| Q |
101 |
aactgctcgaagcctagtgttgttggag |
128 |
Q |
| |
|
||||||||| || |||||||||||||| |
|
|
| T |
27464203 |
aactgctcgttgcttagtgttgttggag |
27464176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 101; Significance: 3e-50; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 9329907 - 9329731
Alignment:
| Q |
1 |
aacatttgcaaagcttatttaagtgcaacctaaacctattcaatctaaagagcgtgtcgttgaaaagatgtccgatgttgatctccctatttcaactgtc |
100 |
Q |
| |
|
|||||||| |||| ||||| ||||||||| |||||||||||||||||||||| ||||||||| ||||||| |||||||||||| || ||||||||||||| |
|
|
| T |
9329907 |
aacatttgaaaagtttattcaagtgcaacataaacctattcaatctaaagagtgtgtcgttggaaagatgcccgatgttgatcgccttatttcaactgtc |
9329808 |
T |
|
| Q |
101 |
aactgctcgaagcctagtgttgttggagacactgaaaataattgattgcgagcttcttgaaaacataataattgatg |
177 |
Q |
| |
|
||||||| |||||| || ||||||||| | || ||||||||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
9329807 |
aactgctgttagcctattgctgttggagagattggaaataattgattgtgagcttcttgaaaacataataatcgatg |
9329731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 9383690 - 9383514
Alignment:
| Q |
1 |
aacatttgcaaagcttatttaagtgcaacctaaacctattcaatctaaagagcgtgtcgttgaaaagatgtccgatgttgatctccctatttcaactgtc |
100 |
Q |
| |
|
|||||||| |||| ||||| ||||||||| |||||||||||||||||||||| ||||||||| ||||||| |||||||||||| || ||||||||||||| |
|
|
| T |
9383690 |
aacatttgaaaagtttattcaagtgcaacataaacctattcaatctaaagagtgtgtcgttggaaagatgcccgatgttgatcgccttatttcaactgtc |
9383591 |
T |
|
| Q |
101 |
aactgctcgaagcctagtgttgttggagacactgaaaataattgattgcgagcttcttgaaaacataataattgatg |
177 |
Q |
| |
|
||||||| |||||| || ||||||||| | || ||||||||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
9383590 |
aactgctgttagcctattgctgttggagagattggaaataattgattgtgagcttcttgaaaacataataatcgatg |
9383514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 9330201 - 9329987
Alignment:
| Q |
1 |
aacatttgcaaagcttatttaagtgcaacctaaacctattcaatctaaagagcgtgtcgttgaaaagatgtccgatgttgatctccctatttcaactgtc |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||| ||||||||||||| |
|
|
| T |
9330201 |
aacatttgcaaagcttatttaagtgcaacctaaacctattcaatctaaagagcgtgtcgttagaaggatgcccgatgttgatctccttatttcaactgtc |
9330102 |
T |
|
| Q |
101 |
aactgctcgaagcctagtgttgttggagacactgaaaataattgattgcgagcttcttgaaaacataataattgatgtaagaaaaggggaggaatcgaga |
200 |
Q |
| |
|
||| ||| ||| |||||| ||| || | | || |||||| || || | ||||||| |||||||| |||| | ||||||| ||||| |||||| |
|
|
| T |
9330101 |
aacagctgttagcttagtgtcgttagacagattggaaataaaggaatgtggaagtcttgaatacataata---gatgaaggaaaaggtgaggagtcgaga |
9330005 |
T |
|
| Q |
201 |
ggtgaaatagttgatgat |
218 |
Q |
| |
|
||||||||| |||||||| |
|
|
| T |
9330004 |
ggtgaaataattgatgat |
9329987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 9383984 - 9383770
Alignment:
| Q |
1 |
aacatttgcaaagcttatttaagtgcaacctaaacctattcaatctaaagagcgtgtcgttgaaaagatgtccgatgttgatctccctatttcaactgtc |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||| ||||||||||||| |
|
|
| T |
9383984 |
aacatttgcaaagcttatttaagtgcaacctaaacctattcaatctaaagagcgtgtcgttagaaggatgcccgatgttgatctccttatttcaactgtc |
9383885 |
T |
|
| Q |
101 |
aactgctcgaagcctagtgttgttggagacactgaaaataattgattgcgagcttcttgaaaacataataattgatgtaagaaaaggggaggaatcgaga |
200 |
Q |
| |
|
||| ||| ||| |||||| ||| || | | || |||||| || || | ||||||| |||||||| |||| | ||||||| ||||| |||||| |
|
|
| T |
9383884 |
aacagctgttagcttagtgtcgttagacagattggaaataaaggaatgtggaagtcttgaatacataata---gatgaaggaaaaggtgaggagtcgaga |
9383788 |
T |
|
| Q |
201 |
ggtgaaatagttgatgat |
218 |
Q |
| |
|
||||||||| |||||||| |
|
|
| T |
9383787 |
ggtgaaataattgatgat |
9383770 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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