View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10151A_low_88 (Length: 302)
Name: NF10151A_low_88
Description: NF10151A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10151A_low_88 |
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Alignment Details
Target: chr2 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 7 - 289
Target Start/End: Original strand, 11792570 - 11792852
Alignment:
| Q |
7 |
gattctccagtcaaccactaccataataaaaaacacttaaacctcaaattagttggggtttaaggattctataaacaagggccacatgcttggaagatca |
106 |
Q |
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| T |
11792570 |
gattctccagtcaaccactaccataataaaaaacacttaaacctcaaattagttggggtttaaggattctataaacaagggccacatgcttggaagatca |
11792669 |
T |
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| Q |
107 |
aggacaagatttcaaggaattttgaattagtagtggattaattaatgtgccatttaaccaagtggtggttcatgttcctgtgaggatttggaaacctacc |
206 |
Q |
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| T |
11792670 |
aggacaagatttcaaggaattttgaattagtagtggattaattaatgtgccatttaaccaagtggtggttcatgttcctgtgaggatttggaaacctacc |
11792769 |
T |
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| Q |
207 |
aagtagactatcatcatctcatattaaaatatgtaaaagtttgattagaccttccattaattggaagaatgtgaggctgattt |
289 |
Q |
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| T |
11792770 |
aagtagactatcatcatctcatattaaaatatgtaaaagtttgattggaccttccattaattggaagaatgtgatgctgattt |
11792852 |
T |
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