View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10151A_low_95 (Length: 294)

Name: NF10151A_low_95
Description: NF10151A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10151A_low_95
NF10151A_low_95
[»] chr1 (10 HSPs)
chr1 (88-206)||(31771310-31771428)
chr1 (88-210)||(7608318-7608440)
chr1 (142-235)||(7608224-7608317)
chr1 (142-235)||(31771212-31771305)
chr1 (230-288)||(7608097-7608155)
chr1 (230-286)||(31771087-31771143)
chr1 (88-145)||(1721556-1721613)
chr1 (78-145)||(17726023-17726089)
chr1 (87-132)||(32440659-32440704)
chr1 (87-145)||(22368196-22368254)
[»] scaffold0152 (1 HSPs)
scaffold0152 (88-184)||(10195-10291)
[»] chr3 (10 HSPs)
chr3 (83-162)||(19766009-19766088)
chr3 (20-75)||(11427105-11427160)
chr3 (77-132)||(11394007-11394062)
chr3 (99-184)||(31687881-31687966)
chr3 (233-273)||(31688056-31688096)
chr3 (88-132)||(46233973-46234017)
chr3 (233-273)||(31896771-31896811)
chr3 (233-273)||(31912480-31912520)
chr3 (82-145)||(52130783-52130846)
chr3 (233-273)||(31946128-31946168)
[»] chr2 (5 HSPs)
chr2 (74-145)||(997806-997877)
chr2 (87-162)||(4453777-4453852)
chr2 (87-132)||(9208569-9208614)
chr2 (83-122)||(7161811-7161850)
chr2 (78-141)||(3625169-3625234)
[»] chr4 (5 HSPs)
chr4 (78-145)||(32651267-32651334)
chr4 (78-162)||(38467690-38467775)
chr4 (90-162)||(3649873-3649945)
chr4 (80-143)||(41810163-41810226)
chr4 (88-123)||(26720237-26720272)
[»] scaffold0003 (3 HSPs)
scaffold0003 (88-184)||(36966-37062)
scaffold0003 (83-123)||(43199-43239)
scaffold0003 (233-272)||(36837-36876)
[»] chr6 (3 HSPs)
chr6 (77-122)||(31444760-31444805)
chr6 (83-123)||(27444122-27444162)
chr6 (82-130)||(33054175-33054223)
[»] scaffold0014 (1 HSPs)
scaffold0014 (81-123)||(32608-32650)
[»] chr8 (2 HSPs)
chr8 (88-162)||(44663663-44663737)
chr8 (88-162)||(35348991-35349066)
[»] chr7 (2 HSPs)
chr7 (83-132)||(16262692-16262741)
chr7 (88-130)||(21820186-21820228)


Alignment Details
Target: chr1 (Bit Score: 107; Significance: 1e-53; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 88 - 206
Target Start/End: Complemental strand, 31771428 - 31771310
Alignment:
Q  88 atctaacttattcctaatcctagttaacactccaaataacactcccaaccctaattctcctattttaggtgccaacaaacctcagcccttggatctaatc 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  31771428 atctaacttattcctaatcctagttaacactccaaataacactcccaaccctaattctcctgttttaggcgccaacaaacctcagcccttggatctaatc 31771329  T
Q  188 tgtttgccattttttcctc 206  Q
    ||||||| |||||||||||    
T  31771328 tgtttgcaattttttcctc 31771310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 88 - 210
Target Start/End: Complemental strand, 7608440 - 7608318
Alignment:
Q  88 atctaacttattcctaatcctagttaacactccaaataacactcccaaccctaattctcctattttaggtgccaacaaacctcagcccttggatctaatc 187  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||    
T  7608440 atctaacttattcctaatcctagttaaaactccaaataacactcccaaccctaattctcctgttttaggcgccaacaaatctcagcccttggatctaatc 7608341  T
Q  188 tgtttgccattttttcctccttt 210  Q
    ||||||| |||||||||||||||    
T  7608340 tgtttgcaattttttcctccttt 7608318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 142 - 235
Target Start/End: Complemental strand, 7608317 - 7608224
Alignment:
Q  142 ttctcctattttaggtgccaacaaacctcagcccttggatctaatctgtttgccattttttcctcctttcttacgtgacaaaattaattgtatt 235  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7608317 ttctcctgttttaggcgccaacaaacctcagcccttggatctaatctgtttgccattttttcctcctttcttacgtgacaaaattaattgtatt 7608224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 142 - 235
Target Start/End: Complemental strand, 31771305 - 31771212
Alignment:
Q  142 ttctcctattttaggtgccaacaaacctcagcccttggatctaatctgtttgccattttttcctcctttcttacgtgacaaaattaattgtatt 235  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  31771305 ttctcctgttttaggcgccaacaaacctcagcccttggatctaatctgtttgccagtttttcctcctttcttacgtgacaaaattaattgtatt 31771212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 230 - 288
Target Start/End: Complemental strand, 7608155 - 7608097
Alignment:
Q  230 tgtattgtaaatgacaaataattaatgttattggtttccaataaccctcctttctctcc 288  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7608155 tgtattgtaaatgacaaataattaatgttattggtttccaataaccctcctttctctcc 7608097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 230 - 286
Target Start/End: Complemental strand, 31771143 - 31771087
Alignment:
Q  230 tgtattgtaaatgacaaataattaatgttattggtttccaataaccctcctttctct 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31771143 tgtattgtaaatgacaaataattaatgttattggtttccaataaccctcctttctct 31771087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 88 - 145
Target Start/End: Original strand, 1721556 - 1721613
Alignment:
Q  88 atctaacttattcctaatcctagttaacactccaaataacactcccaaccctaattct 145  Q
    |||||||||||||||||||||| |||||||||||| |||| || ||||||||||||||    
T  1721556 atctaacttattcctaatcctaattaacactccaattaacgctgccaaccctaattct 1721613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 145
Target Start/End: Original strand, 17726023 - 17726089
Alignment:
Q  78 atctaatctaatctaacttattcctaatcctagttaacactccaaataacactcccaaccctaattct 145  Q
    |||||||||||||||| |||||||||||||||||||||||||||| || ||||   ||||||||||||    
T  17726023 atctaatctaatctaa-ttattcctaatcctagttaacactccaattatcacttaaaaccctaattct 17726089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 32440704 - 32440659
Alignment:
Q  87 aatctaacttattcctaatcctagttaacactccaaataacactcc 132  Q
    |||||||||||||||||||||||||||||||||||| || ||||||    
T  32440704 aatctaacttattcctaatcctagttaacactccaattatcactcc 32440659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 145
Target Start/End: Complemental strand, 22368254 - 22368196
Alignment:
Q  87 aatctaacttattcctaatcctagttaacactccaaataacactcccaaccctaattct 145  Q
    |||||||||||||||||||||||||||||||| ||| || ||||   ||||||||||||    
T  22368254 aatctaacttattcctaatcctagttaacacttcaattatcacttaaaaccctaattct 22368196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 88 - 184
Target Start/End: Original strand, 10195 - 10291
Alignment:
Q  88 atctaacttattcctaatcctagttaacactccaaataacactcccaaccctaattctcctattttaggtgcc-aacaaacctcagcccttggatcta 184  Q
    |||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||| || ||||||| ||| ||||| ||| ||||||||||||||    
T  10195 atctaacttattcccaatcctagttaacactccaattaacactccaaaccctaattctacttttttaggcgccaaacaatcct-agcccttggatcta 10291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 7e-21; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 19766009 - 19766088
Alignment:
Q  83 atctaatctaacttattcctaatcctagttaacactccaaataacactcccaaccctaattctcctattttaggtgccaa 162  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||| || || ||||||| |||||    
T  19766009 atctaatctaacttatttctaatcctagttaacactccaattaacactccaaaccctaatcctacttttttaggcgccaa 19766088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 11427160 - 11427105
Alignment:
Q  20 acatcattttcatagtatcaagatgcaaaactaattacattttgcaatcaggtaat 75  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  11427160 acatcattttcatggtatcaagatgcaaaactaattatattttgcaatcaggtaat 11427105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 11394007 - 11394062
Alignment:
Q  77 tatctaatctaatctaacttattcctaatcctagttaacactccaaataacactcc 132  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| || ||||||    
T  11394007 tatctaatctaatctaacttatttctaatcctagttaacactccaattatcactcc 11394062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 184
Target Start/End: Original strand, 31687881 - 31687966
Alignment:
Q  99 tcctaatcctagttaacactccaaataacactcccaaccctaattctcctattttaggtgcc-aacaaacctcagcccttggatcta 184  Q
    ||||| |||||||||||||||||| | ||||||| |||||||||||| || ||||||| ||| ||||| ||| ||||||||||||||    
T  31687881 tcctagtcctagttaacactccaacttacactccaaaccctaattctacttttttaggcgccaaacaatcct-agcccttggatcta 31687966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 233 - 273
Target Start/End: Original strand, 31688056 - 31688096
Alignment:
Q  233 attgtaaatgacaaataattaatgttattggtttccaataa 273  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  31688056 attgtaaatgacaaataattaatgttatcggtttccaataa 31688096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 88 - 132
Target Start/End: Complemental strand, 46234017 - 46233973
Alignment:
Q  88 atctaacttattcctaatcctagttaacactccaaataacactcc 132  Q
    ||||||||||||||||||||||||||||||||||| || ||||||    
T  46234017 atctaacttattcctaatcctagttaacactccaattatcactcc 46233973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 31896811 - 31896771
Alignment:
Q  233 attgtaaatgacaaataattaatgttattggtttccaataa 273  Q
    |||||||||||||||||||||||||||| | ||||||||||    
T  31896811 attgtaaatgacaaataattaatgttatcgatttccaataa 31896771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 31912520 - 31912480
Alignment:
Q  233 attgtaaatgacaaataattaatgttattggtttccaataa 273  Q
    |||||||||||||||||||||||||||| | ||||||||||    
T  31912520 attgtaaatgacaaataattaatgttatcgatttccaataa 31912480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 145
Target Start/End: Original strand, 52130783 - 52130846
Alignment:
Q  82 aatctaatctaacttattcctaatcctagttaacactccaaataacactcccaaccctaattct 145  Q
    |||||| ||||||||||| |||||||||| ||||||||||| || ||||   ||||||||||||    
T  52130783 aatctagtctaacttatttctaatcctaggtaacactccaattaccacttaaaaccctaattct 52130846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 31946168 - 31946128
Alignment:
Q  233 attgtaaatgacaaataattaatgttattggtttccaataa 273  Q
    ||||||||||||||||||| |||||||| | ||||||||||    
T  31946168 attgtaaatgacaaataatgaatgttatcgatttccaataa 31946128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 7e-21; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 74 - 145
Target Start/End: Original strand, 997806 - 997877
Alignment:
Q  74 atctatctaatctaatctaacttattcctaatcctagttaacactccaaataacactcccaaccctaattct 145  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| || | || ||||||||||||||    
T  997806 atctatctaatctaatctaacttattcctaatcctagttaacacttcaattagccctgccaaccctaattct 997877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 87 - 162
Target Start/End: Original strand, 4453777 - 4453852
Alignment:
Q  87 aatctaacttattcctaatcctagttaacactccaaataacactcccaaccctaattctcctattttaggtgccaa 162  Q
    |||||||||||||||||||||||||||||||||||| || ||||   ||||||||||||   |||||||| |||||    
T  4453777 aatctaacttattcctaatcctagttaacactccaattaccacttaaaaccctaattctatgattttaggcgccaa 4453852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 9208569 - 9208614
Alignment:
Q  87 aatctaacttattcctaatcctagttaacactccaaataacactcc 132  Q
    |||||||||||||||||||||||||||||||||||| || ||||||    
T  9208569 aatctaacttattcctaatcctagttaacactccaattatcactcc 9208614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 83 - 122
Target Start/End: Original strand, 7161811 - 7161850
Alignment:
Q  83 atctaatctaacttattcctaatcctagttaacactccaa 122  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  7161811 atctaatctaacttatttctaatcctagttaacactccaa 7161850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 141
Target Start/End: Original strand, 3625169 - 3625234
Alignment:
Q  78 atctaatctaa--tctaacttattcctaatcctagttaacactccaaataacactcccaaccctaa 141  Q
    |||||||||||  ||||||||||||||||||||| |||||||||||| ||||  | ||||||||||    
T  3625169 atctaatctaacttctaacttattcctaatcctaattaacactccaattaaccatgccaaccctaa 3625234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 145
Target Start/End: Complemental strand, 32651334 - 32651267
Alignment:
Q  78 atctaatctaatctaacttattcctaatcctagttaacactccaaataacactcccaaccctaattct 145  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||   ||||||||||||    
T  32651334 atctaatctaatctaacttattcctaatcctagttaacactccaattatcacttaaaaccctaattct 32651267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 78 - 162
Target Start/End: Complemental strand, 38467775 - 38467690
Alignment:
Q  78 atctaatctaatctaacttattcctaatcctagttaacactccaaataacactcccaaccctaattct-cctattttaggtgccaa 162  Q
    ||||||||||||||||||||||  ||||||||||||||||||||| |||||||   |||||||||||| | ||||||||| |||||    
T  38467775 atctaatctaatctaacttatttataatcctagttaacactccaattaacacttaaaaccctaattctacttattttaggcgccaa 38467690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 90 - 162
Target Start/End: Original strand, 3649873 - 3649945
Alignment:
Q  90 ctaacttattcctaatcctagttaacactccaaataacactcccaaccctaattctcctattttaggtgccaa 162  Q
    ||||||||||||||||||||||||||||||||| |||||||   |||||||| ||| || ||||||| |||||    
T  3649873 ctaacttattcctaatcctagttaacactccaattaacacttaaaaccctaaatctacttttttaggcgccaa 3649945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 143
Target Start/End: Original strand, 41810163 - 41810226
Alignment:
Q  80 ctaatctaatctaacttattcctaatcctagttaacactccaaataacactcccaaccctaatt 143  Q
    |||||||||||||||||||| |||||||||||||||||||||| || ||||   ||||||||||    
T  41810163 ctaatctaatctaacttatttctaatcctagttaacactccaattaccacttaaaaccctaatt 41810226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 123
Target Start/End: Original strand, 26720237 - 26720272
Alignment:
Q  88 atctaacttattcctaatcctagttaacactccaaa 123  Q
    ||||||||||||||||||||||||||||||||||||    
T  26720237 atctaacttattcctaatcctagttaacactccaaa 26720272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 46; Significance: 3e-17; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 88 - 184
Target Start/End: Complemental strand, 37062 - 36966
Alignment:
Q  88 atctaacttattcctaatcctagttaacactccaaataacactcccaaccctaattctcctattttaggtgcc-aacaaacctcagcccttggatcta 184  Q
    |||||||||||||||||||||| |||||||||||| ||||||| | || ||||||||| || ||||||| ||| ||||| ||| ||||||||||||||    
T  37062 atctaacttattcctaatcctaattaacactccaattaacacttcaaatcctaattcttcttttttaggcgccaaacaatcct-agcccttggatcta 36966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 83 - 123
Target Start/End: Complemental strand, 43239 - 43199
Alignment:
Q  83 atctaatctaacttattcctaatcctagttaacactccaaa 123  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  43239 atctaatctaacttattcctaatcgtagttaacactccaaa 43199  T

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Target: scaffold0003; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 272
Target Start/End: Complemental strand, 36876 - 36837
Alignment:
Q  233 attgtaaatgacaaataattaatgttattggtttccaata 272  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  36876 attgtaaatgacaaataattaatgttatcggtttccaata 36837  T

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Target: chr6 (Bit Score: 46; Significance: 3e-17; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 77 - 122
Target Start/End: Original strand, 31444760 - 31444805
Alignment:
Q  77 tatctaatctaatctaacttattcctaatcctagttaacactccaa 122  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  31444760 tatctaatctaatctaacttattcctaatcctagttaacactccaa 31444805  T

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Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 83 - 123
Target Start/End: Original strand, 27444122 - 27444162
Alignment:
Q  83 atctaatctaacttattcctaatcctagttaacactccaaa 123  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  27444122 atctaatctaacttattcctaatcgtagttaacactccaaa 27444162  T

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Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 82 - 130
Target Start/End: Complemental strand, 33054223 - 33054175
Alignment:
Q  82 aatctaatctaacttattcctaatcctagttaacactccaaataacact 130  Q
    |||||||||||||||||||||||||||| |||||||| ||| |||||||    
T  33054223 aatctaatctaacttattcctaatcctaattaacactacaattaacact 33054175  T

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Target: scaffold0014 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 81 - 123
Target Start/End: Original strand, 32608 - 32650
Alignment:
Q  81 taatctaatctaacttattcctaatcctagttaacactccaaa 123  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  32608 taatctaatctaacttatttctaatcctagttaacactccaaa 32650  T

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Target: chr8 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 162
Target Start/End: Complemental strand, 44663737 - 44663663
Alignment:
Q  88 atctaacttattcctaatcctagttaacactccaaataacactcccaaccctaattctcctattttaggtgccaa 162  Q
    ||||||||||||||||||||||||||||||||||| || ||||   ||||||||||||   |||||||| |||||    
T  44663737 atctaacttattcctaatcctagttaacactccaattaccacttaaaaccctaattctatgattttaggcgccaa 44663663  T

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Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 162
Target Start/End: Original strand, 35348991 - 35349066
Alignment:
Q  88 atctaacttattcctaatcctagttaacactccaaataacactcccaaccctaattct-cctattttaggtgccaa 162  Q
    |||||||||||| |||||||||||||||||||||| |||||||   || ||||||||| | ||||||||| |||||    
T  35348991 atctaacttatttctaatcctagttaacactccaattaacacttaaaatcctaattctacttattttaggcgccaa 35349066  T

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Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 16262741 - 16262692
Alignment:
Q  83 atctaatctaacttattcctaatcctagttaacactccaaataacactcc 132  Q
    |||||||||||||||||||||||||||||||||||| ||| || ||||||    
T  16262741 atctaatctaacttattcctaatcctagttaacacttcaattatcactcc 16262692  T

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Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 88 - 130
Target Start/End: Complemental strand, 21820228 - 21820186
Alignment:
Q  88 atctaacttattcctaatcctagttaacactccaaataacact 130  Q
    |||||||||||||||||||||| |||||||||||| |||||||    
T  21820228 atctaacttattcctaatcctaattaacactccaattaacact 21820186  T

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