View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10151_high_19 (Length: 329)
Name: NF10151_high_19
Description: NF10151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10151_high_19 |
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Alignment Details
Target: chr1 (Bit Score: 300; Significance: 1e-169; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 300; E-Value: 1e-169
Query Start/End: Original strand, 11 - 314
Target Start/End: Complemental strand, 47396366 - 47396063
Alignment:
| Q |
11 |
cagagaccatataaatttattccagacaatccacctgatcaactcacttttggatcaaaaacctcttttatgtactttgaaataatgatgagtttaataa |
110 |
Q |
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| T |
47396366 |
cagagaccatataaatttattccagacaatccacctgatcaactcacttttggatcaaaaacctcttttatgtactttgaaataatgatgagtttaataa |
47396267 |
T |
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| Q |
111 |
tatcaagaatttgtaacactcgcgtcatatatagttatgtgttttaattaacttactacatggtcaacaacatattggttttggctttccttgtataagt |
210 |
Q |
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| T |
47396266 |
tatcaagaatttgtaacactcgcgtcatatatagttatgtgttttaattaacttactacatggtcaacaacatattggttttggctttccttgtataagt |
47396167 |
T |
|
| Q |
211 |
tcatgaataaacatgatgttataaatagtcaattaacaactgaattagtttattaattaatcaccatcttttatgtcccctttgagtaggtgttgtgtgc |
310 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
47396166 |
tcatgaataaacatgatgttataaatagtcaattaacaactgaattagtttattaattaattaccatcttttatgtcccctttgagtaggtgttgtgtgc |
47396067 |
T |
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| Q |
311 |
taat |
314 |
Q |
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|||| |
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| T |
47396066 |
taat |
47396063 |
T |
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