View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10151_high_28 (Length: 265)
Name: NF10151_high_28
Description: NF10151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10151_high_28 |
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Alignment Details
Target: chr7 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 33275491 - 33275254
Alignment:
| Q |
1 |
aactagggtaccctaaattctacctaaccttaatgtattttcttgtttttctaagtgatttggtgattccttccttattctttaatctttagcgtggctt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |
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| T |
33275491 |
aactagggtaccctaaattctacctaaccttaatgtattttcttgtttttctaagtgatt-ggtgattcctt----attctttaatctttagcgtggctt |
33275397 |
T |
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| Q |
101 |
taagatcattttatttgtagggttgctggtattccacaacaatttcaaatttatccaaccaaatattgcccattggatttagaagagaagatctgaattt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33275396 |
taagatcattttatttgtagggttgctggtattccacaataatttcaaatttatccaaccaaatattgcccattggatttagaagagaagatctgaattt |
33275297 |
T |
|
| Q |
201 |
gacaaatttg-tctatattattgtaaaatttgcttttaaaata |
242 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||| |
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| T |
33275296 |
gacaaatttgttctatattattgtaaaatttgcttttaaaata |
33275254 |
T |
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