View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10151_low_29 (Length: 321)

Name: NF10151_low_29
Description: NF10151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10151_low_29
NF10151_low_29
[»] chr3 (47 HSPs)
chr3 (2-71)||(25948895-25948964)
chr3 (1-66)||(38731205-38731270)
chr3 (1-71)||(8383239-8383309)
chr3 (1-71)||(32804547-32804617)
chr3 (2-66)||(2731801-2731863)
chr3 (2-55)||(11313808-11313861)
chr3 (1-70)||(49505161-49505230)
chr3 (1-47)||(7928456-7928502)
chr3 (1-71)||(24205048-24205118)
chr3 (1-67)||(25093488-25093554)
chr3 (1-67)||(28678289-28678355)
chr3 (9-66)||(4987306-4987363)
chr3 (7-76)||(5407260-5407329)
chr3 (5-50)||(9624644-9624689)
chr3 (9-78)||(14832074-14832143)
chr3 (8-48)||(11251983-11252023)
chr3 (1-33)||(40993342-40993374)
chr3 (1-44)||(2941567-2941610)
chr3 (2-45)||(16192758-16192801)
chr3 (1-68)||(29508429-29508496)
chr3 (7-50)||(30994895-30994938)
chr3 (1-36)||(35222955-35222990)
chr3 (1-47)||(8039842-8039888)
chr3 (1-35)||(8789557-8789591)
chr3 (1-71)||(8842312-8842381)
chr3 (1-35)||(10690269-10690303)
chr3 (5-35)||(11493372-11493402)
chr3 (4-34)||(11507485-11507515)
chr3 (4-46)||(12704014-12704056)
chr3 (7-45)||(14840304-14840342)
chr3 (9-67)||(21479104-21479162)
chr3 (8-50)||(27277852-27277894)
chr3 (9-71)||(28917983-28918045)
chr3 (1-47)||(34307787-34307833)
chr3 (6-67)||(4469836-4469897)
chr3 (9-46)||(14209120-14209157)
chr3 (1-70)||(18426932-18427001)
chr3 (1-50)||(20691322-20691371)
chr3 (10-71)||(21720746-21720807)
chr3 (1-50)||(45451556-45451605)
chr3 (1-61)||(1830335-1830395)
chr3 (1-45)||(7614422-7614466)
chr3 (11-71)||(10954934-10954994)
chr3 (1-45)||(11658823-11658867)
chr3 (7-47)||(32429393-32429433)
chr3 (88-128)||(49634012-49634052)
chr3 (9-61)||(49651801-49651853)
[»] chr6 (57 HSPs)
chr6 (1-80)||(9025501-9025578)
chr6 (5-68)||(7996389-7996452)
chr6 (5-68)||(8022349-8022412)
chr6 (1-71)||(9658861-9658931)
chr6 (1-69)||(7265600-7265668)
chr6 (1-64)||(19040341-19040404)
chr6 (1-72)||(26562670-26562741)
chr6 (1-71)||(9027160-9027230)
chr6 (1-71)||(10294089-10294159)
chr6 (1-71)||(13851718-13851788)
chr6 (5-71)||(34073358-34073424)
chr6 (1-50)||(7086798-7086847)
chr6 (1-62)||(13364712-13364773)
chr6 (1-68)||(5732517-5732584)
chr6 (9-68)||(16766682-16766741)
chr6 (1-68)||(19044449-19044516)
chr6 (1-56)||(21924942-21924997)
chr6 (1-71)||(9629365-9629435)
chr6 (1-35)||(11591877-11591911)
chr6 (9-71)||(12696306-12696368)
chr6 (1-71)||(17341671-17341741)
chr6 (9-71)||(17841604-17841666)
chr6 (1-71)||(20371117-20371187)
chr6 (1-47)||(30866151-30866197)
chr6 (1-71)||(33001296-33001366)
chr6 (2-47)||(32511674-32511719)
chr6 (7-71)||(3398601-3398664)
chr6 (1-33)||(7027262-7027294)
chr6 (1-45)||(9617442-9617486)
chr6 (1-68)||(7938101-7938168)
chr6 (4-35)||(13360382-13360413)
chr6 (4-67)||(24833243-24833306)
chr6 (1-71)||(5000633-5000703)
chr6 (1-35)||(7377997-7378031)
chr6 (9-71)||(8776988-8777050)
chr6 (8-50)||(8805586-8805628)
chr6 (9-71)||(9107385-9107447)
chr6 (1-66)||(10339132-10339198)
chr6 (1-67)||(10842518-10842584)
chr6 (1-71)||(26178688-26178758)
chr6 (9-71)||(28152081-28152142)
chr6 (2-64)||(32298615-32298677)
chr6 (8-66)||(34290091-34290149)
chr6 (9-71)||(34595116-34595178)
chr6 (1-46)||(9195761-9195806)
chr6 (1-46)||(17302354-17302399)
chr6 (2-47)||(20576641-20576686)
chr6 (8-45)||(31579239-31579276)
chr6 (3-47)||(1532246-1532290)
chr6 (2-46)||(7151419-7151463)
chr6 (23-79)||(10760870-10760926)
chr6 (1-33)||(12627584-12627616)
chr6 (7-55)||(12686408-12686455)
chr6 (7-71)||(16388246-16388309)
chr6 (1-61)||(16488597-16488657)
chr6 (1-61)||(18367828-18367888)
chr6 (1-56)||(30851599-30851652)
[»] chr5 (44 HSPs)
chr5 (1-68)||(3966488-3966555)
chr5 (1-71)||(16203802-16203872)
chr5 (9-71)||(21191071-21191133)
chr5 (1-67)||(11685925-11685991)
chr5 (9-71)||(21522732-21522794)
chr5 (9-71)||(21533298-21533360)
chr5 (1-67)||(27144449-27144515)
chr5 (9-71)||(43001782-43001844)
chr5 (2-47)||(6471897-6471942)
chr5 (1-50)||(41091264-41091313)
chr5 (4-68)||(26312754-26312818)
chr5 (1-36)||(39758289-39758324)
chr5 (1-67)||(12264836-12264902)
chr5 (9-71)||(14674251-14674313)
chr5 (1-47)||(30502395-30502441)
chr5 (1-47)||(30542738-30542784)
chr5 (7-68)||(14422889-14422948)
chr5 (2-71)||(15410456-15410525)
chr5 (1-50)||(18421848-18421897)
chr5 (9-82)||(21351920-21351993)
chr5 (1-62)||(28588681-28588742)
chr5 (9-70)||(39698524-39698585)
chr5 (3-35)||(24273039-24273071)
chr5 (3-35)||(24389143-24389175)
chr5 (19-67)||(26716130-26716178)
chr5 (19-67)||(26985870-26985918)
chr5 (3-66)||(18592060-18592123)
chr5 (1-67)||(5467985-5468051)
chr5 (9-71)||(6326312-6326374)
chr5 (9-71)||(19579683-19579745)
chr5 (1-35)||(23015996-23016030)
chr5 (7-69)||(30098310-30098372)
chr5 (9-67)||(31084309-31084367)
chr5 (1-47)||(36838549-36838595)
chr5 (9-67)||(41995457-41995515)
chr5 (9-66)||(6247609-6247666)
chr5 (6-47)||(17593734-17593775)
chr5 (5-46)||(35017044-35017085)
chr5 (2-67)||(39205866-39205931)
chr5 (14-71)||(40000555-40000612)
chr5 (1-45)||(17925179-17925223)
chr5 (1-61)||(21814253-21814313)
chr5 (7-71)||(22013396-22013460)
chr5 (4-36)||(42029769-42029801)
[»] chr7 (51 HSPs)
chr7 (1-54)||(17851430-17851483)
chr7 (7-79)||(1400999-1401071)
chr7 (1-68)||(32308105-32308172)
chr7 (1-71)||(18013081-18013151)
chr7 (1-67)||(22484011-22484077)
chr7 (1-67)||(22868028-22868094)
chr7 (1-54)||(7328698-7328751)
chr7 (1-66)||(20549778-20549843)
chr7 (1-64)||(2948672-2948735)
chr7 (1-48)||(24146821-24146868)
chr7 (8-71)||(29787383-29787446)
chr7 (1-71)||(3721076-3721145)
chr7 (1-67)||(6630919-6630985)
chr7 (1-67)||(15902808-15902874)
chr7 (1-71)||(19206032-19206102)
chr7 (1-35)||(22602717-22602751)
chr7 (4-70)||(23191879-23191945)
chr7 (1-71)||(26733286-26733356)
chr7 (9-71)||(27945023-27945085)
chr7 (1-71)||(43249975-43250045)
chr7 (2-67)||(5233615-5233680)
chr7 (1-58)||(5548671-5548728)
chr7 (1-70)||(9482917-9482986)
chr7 (1-50)||(12278838-12278887)
chr7 (1-45)||(27732246-27732290)
chr7 (1-32)||(640134-640165)
chr7 (8-47)||(2424620-2424659)
chr7 (9-68)||(5409851-5409910)
chr7 (1-68)||(15680794-15680861)
chr7 (3-50)||(16341499-16341546)
chr7 (1-36)||(18213040-18213075)
chr7 (9-68)||(24339627-24339686)
chr7 (9-68)||(25481887-25481946)
chr7 (1-36)||(39138461-39138496)
chr7 (1-71)||(1433436-1433506)
chr7 (1-35)||(5835265-5835299)
chr7 (2-64)||(5956262-5956324)
chr7 (5-71)||(10377489-10377555)
chr7 (17-71)||(11722121-11722175)
chr7 (8-50)||(12289117-12289159)
chr7 (9-71)||(13770673-13770735)
chr7 (1-47)||(19992007-19992053)
chr7 (1-71)||(21828412-21828482)
chr7 (1-67)||(26329389-26329455)
chr7 (5-47)||(27093424-27093466)
chr7 (5-47)||(27184835-27184877)
chr7 (9-66)||(7438693-7438750)
chr7 (2-47)||(8160422-8160467)
chr7 (2-35)||(17307911-17307944)
chr7 (1-45)||(8239057-8239101)
chr7 (1-45)||(23849465-23849509)
[»] chr2 (41 HSPs)
chr2 (2-71)||(21616744-21616813)
chr2 (8-66)||(21782832-21782890)
chr2 (1-71)||(23718008-23718078)
chr2 (1-71)||(24105680-24105750)
chr2 (1-63)||(37411251-37411313)
chr2 (1-68)||(20242734-20242801)
chr2 (1-67)||(18276507-18276573)
chr2 (1-67)||(31808063-31808129)
chr2 (1-66)||(35449500-35449565)
chr2 (3-67)||(15909641-15909705)
chr2 (3-46)||(2665897-2665940)
chr2 (9-71)||(24894371-24894433)
chr2 (9-71)||(30404865-30404927)
chr2 (1-71)||(34784989-34785059)
chr2 (1-47)||(44860326-44860372)
chr2 (1-66)||(896198-896263)
chr2 (1-46)||(5367199-5367244)
chr2 (1-58)||(34691812-34691869)
chr2 (1-58)||(34714224-34714281)
chr2 (3-71)||(16069263-16069331)
chr2 (4-56)||(28677906-28677958)
chr2 (1-64)||(18420441-18420504)
chr2 (1-36)||(20922935-20922970)
chr2 (1-32)||(28524447-28524478)
chr2 (1-68)||(31018575-31018642)
chr2 (8-71)||(31284030-31284093)
chr2 (9-71)||(6940237-6940299)
chr2 (1-35)||(18889598-18889632)
chr2 (9-71)||(21374714-21374776)
chr2 (1-67)||(30527602-30527668)
chr2 (9-71)||(30717545-30717607)
chr2 (9-71)||(37558959-37559021)
chr2 (1-35)||(38355894-38355928)
chr2 (1-35)||(39279693-39279727)
chr2 (9-70)||(21091706-21091767)
chr2 (4-69)||(36281669-36281734)
chr2 (8-60)||(4332919-4332971)
chr2 (1-45)||(17776595-17776639)
chr2 (2-46)||(18622613-18622657)
chr2 (7-67)||(23921239-23921299)
chr2 (1-53)||(30471038-30471090)
[»] chr1 (61 HSPs)
chr1 (6-71)||(15641042-15641107)
chr1 (3-78)||(12443469-12443544)
chr1 (1-71)||(398772-398842)
chr1 (2-72)||(6427331-6427401)
chr1 (1-71)||(9709802-9709872)
chr1 (1-67)||(36878447-36878513)
chr1 (2-71)||(19562629-19562698)
chr1 (4-78)||(40181848-40181920)
chr1 (13-71)||(2896140-2896198)
chr1 (2-56)||(13436455-13436509)
chr1 (1-67)||(17831538-17831604)
chr1 (1-71)||(52903231-52903301)
chr1 (1-46)||(7918218-7918263)
chr1 (1-45)||(1864887-1864931)
chr1 (2-66)||(27471574-27471638)
chr1 (3-50)||(19324565-19324612)
chr1 (9-80)||(22515902-22515973)
chr1 (2-61)||(25098563-25098622)
chr1 (8-67)||(25452162-25452221)
chr1 (1-36)||(30749857-30749892)
chr1 (1-36)||(30771308-30771343)
chr1 (1-56)||(39953153-39953208)
chr1 (1-71)||(1486716-1486786)
chr1 (9-71)||(5376515-5376577)
chr1 (1-35)||(10233271-10233305)
chr1 (1-71)||(10577742-10577812)
chr1 (1-67)||(13997869-13997935)
chr1 (1-35)||(25361904-25361938)
chr1 (1-35)||(34371731-34371765)
chr1 (1-71)||(38503302-38503372)
chr1 (1-35)||(44482248-44482282)
chr1 (1-66)||(10572596-10572661)
chr1 (1-34)||(17705593-17705626)
chr1 (1-50)||(34712390-34712439)
chr1 (7-71)||(34298418-34298482)
chr1 (1-68)||(15323148-15323215)
chr1 (9-63)||(113289-113343)
chr1 (9-67)||(3490405-3490463)
chr1 (5-67)||(5898277-5898339)
chr1 (1-71)||(6415008-6415078)
chr1 (9-71)||(6612186-6612248)
chr1 (4-46)||(12713337-12713379)
chr1 (4-46)||(12717428-12717470)
chr1 (4-46)||(14332652-14332694)
chr1 (1-35)||(20157357-20157391)
chr1 (1-71)||(23636056-23636126)
chr1 (1-39)||(25934630-25934668)
chr1 (1-71)||(30847727-30847797)
chr1 (9-47)||(31015049-31015087)
chr1 (2-68)||(36905982-36906048)
chr1 (1-67)||(38075977-38076043)
chr1 (9-71)||(46348398-46348460)
chr1 (9-70)||(1815240-1815301)
chr1 (1-82)||(7353500-7353581)
chr1 (1-46)||(9828051-9828096)
chr1 (9-54)||(37055871-37055916)
chr1 (1-33)||(5944303-5944335)
chr1 (1-80)||(26238120-26238196)
chr1 (1-33)||(35919283-35919315)
chr1 (1-69)||(37598816-37598883)
chr1 (1-45)||(39130774-39130818)
[»] scaffold0008 (1 HSPs)
scaffold0008 (1-71)||(263379-263449)
[»] chr8 (44 HSPs)
chr8 (1-67)||(13844603-13844669)
chr8 (1-71)||(27213529-27213599)
chr8 (1-70)||(34897068-34897137)
chr8 (1-61)||(31236584-31236644)
chr8 (1-67)||(4786345-4786411)
chr8 (9-67)||(18407705-18407763)
chr8 (1-67)||(24362209-24362275)
chr8 (2-71)||(36934652-36934721)
chr8 (2-50)||(11803262-11803310)
chr8 (2-50)||(14731715-14731763)
chr8 (3-67)||(39954288-39954352)
chr8 (1-48)||(3025556-3025603)
chr8 (1-56)||(11927093-11927148)
chr8 (1-36)||(26902182-26902217)
chr8 (4-71)||(29776018-29776085)
chr8 (8-71)||(37283824-37283887)
chr8 (1-67)||(20679402-20679468)
chr8 (1-50)||(12570515-12570564)
chr8 (1-50)||(12606836-12606885)
chr8 (1-46)||(14134706-14134751)
chr8 (1-70)||(15816136-15816205)
chr8 (4-47)||(4611540-4611583)
chr8 (1-32)||(8847277-8847308)
chr8 (1-56)||(11944662-11944717)
chr8 (1-36)||(18964194-18964229)
chr8 (1-71)||(926795-926865)
chr8 (9-71)||(22651958-22652020)
chr8 (1-71)||(28385001-28385071)
chr8 (9-71)||(29510319-29510381)
chr8 (1-71)||(31109525-31109595)
chr8 (1-47)||(34222953-34222999)
chr8 (9-71)||(36450769-36450831)
chr8 (1-67)||(44067502-44067568)
chr8 (9-70)||(6065672-6065733)
chr8 (9-70)||(7442828-7442889)
chr8 (1-46)||(7658470-7658515)
chr8 (9-66)||(22595981-22596038)
chr8 (1-70)||(25192354-25192423)
chr8 (9-50)||(40332194-40332235)
chr8 (6-46)||(13203648-13203688)
chr8 (9-69)||(30271306-30271366)
chr8 (1-45)||(31580134-31580178)
chr8 (1-45)||(33382026-33382070)
chr8 (1-45)||(33405391-33405435)
[»] chr4 (38 HSPs)
chr4 (2-69)||(36635308-36635375)
chr4 (2-67)||(15029751-15029816)
chr4 (1-62)||(40613441-40613502)
chr4 (2-54)||(18576045-18576097)
chr4 (7-55)||(35161034-35161082)
chr4 (1-56)||(13134447-13134502)
chr4 (1-67)||(35723391-35723458)
chr4 (4-70)||(903905-903971)
chr4 (9-67)||(21945489-21945547)
chr4 (3-45)||(22440609-22440651)
chr4 (1-71)||(26504306-26504376)
chr4 (8-78)||(32910526-32910596)
chr4 (1-45)||(5775365-5775409)
chr4 (7-47)||(8423731-8423771)
chr4 (3-71)||(13783263-13783331)
chr4 (2-50)||(15659768-15659816)
chr4 (4-71)||(5414182-5414249)
chr4 (1-79)||(16189682-16189761)
chr4 (1-48)||(40774286-40774333)
chr4 (9-67)||(3947781-3947839)
chr4 (1-35)||(10499277-10499311)
chr4 (1-67)||(14126118-14126184)
chr4 (9-71)||(23293001-23293063)
chr4 (1-71)||(24343489-24343559)
chr4 (9-67)||(40481623-40481680)
chr4 (8-50)||(56257936-56257978)
chr4 (9-70)||(4383351-4383411)
chr4 (18-71)||(20521873-20521926)
chr4 (6-67)||(21539879-21539940)
chr4 (7-72)||(30838191-30838256)
chr4 (1-46)||(54580030-54580075)
chr4 (4-67)||(7970507-7970568)
chr4 (4-44)||(9996849-9996889)
chr4 (8-71)||(16184801-16184862)
chr4 (2-66)||(20743286-20743350)
chr4 (1-33)||(22234897-22234929)
chr4 (5-33)||(40179647-40179675)
chr4 (4-52)||(49652982-49653030)
[»] scaffold0103 (1 HSPs)
scaffold0103 (9-71)||(51793-51855)
[»] scaffold0044 (1 HSPs)
scaffold0044 (1-63)||(53170-53232)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-55)||(135319-135373)
[»] scaffold0004 (1 HSPs)
scaffold0004 (9-70)||(92790-92851)
[»] scaffold0652 (1 HSPs)
scaffold0652 (9-71)||(477-539)
[»] scaffold0306 (1 HSPs)
scaffold0306 (9-71)||(13382-13444)
[»] scaffold0223 (1 HSPs)
scaffold0223 (9-71)||(20154-20216)
[»] scaffold0171 (2 HSPs)
scaffold0171 (1-67)||(23406-23472)
scaffold0171 (1-33)||(23531-23563)
[»] scaffold0168 (1 HSPs)
scaffold0168 (1-71)||(21025-21095)
[»] scaffold0152 (1 HSPs)
scaffold0152 (9-71)||(21883-21945)
[»] scaffold0123 (1 HSPs)
scaffold0123 (1-35)||(44532-44566)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-46)||(9754-9799)
[»] scaffold0022 (2 HSPs)
scaffold0022 (2-67)||(99879-99944)
scaffold0022 (1-45)||(90851-90895)
[»] scaffold0623 (1 HSPs)
scaffold0623 (1-68)||(6003-6070)
[»] scaffold0110 (1 HSPs)
scaffold0110 (1-72)||(28831-28902)
[»] scaffold0003 (1 HSPs)
scaffold0003 (8-71)||(241576-241639)
[»] scaffold0246 (1 HSPs)
scaffold0246 (9-67)||(19562-19619)
[»] scaffold0136 (1 HSPs)
scaffold0136 (9-67)||(3864-3922)
[»] scaffold0027 (1 HSPs)
scaffold0027 (9-71)||(46664-46726)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-71)||(225275-225345)
[»] scaffold0018 (1 HSPs)
scaffold0018 (9-70)||(192264-192325)
[»] scaffold0236 (1 HSPs)
scaffold0236 (1-45)||(25775-25819)


Alignment Details
Target: chr3 (Bit Score: 50; Significance: 1e-19; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 25948895 - 25948964
Alignment:
Q  2 acacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    |||| ||||||||||||||||||||||||||| |  |||||||||| |||||||||||||||||||||||    
T  25948895 acacttataattacactgaattatgtgattttttcaaattattagccgtatcggcatgtcagtgtccgtg 25948964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 38731270 - 38731205
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgt 66  Q
    ||||||||||| ||||||||||||||||||||| || |||||||||| |||||| |||||| ||||    
T  38731270 gacacatataactacactgaattatgtgattttttaaaattattagcggtatcgacatgtcggtgt 38731205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 8383309 - 8383239
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||| ||||||||||||||||||| |||||||||  |||||||||| || ||||| ||||| ||||||||    
T  8383309 gacacttataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtg 8383239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 32804547 - 32804617
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    |||||||||||||||||| ||||||||||||||||  |||||||| | || ||||||||||| || |||||    
T  32804547 gacacatataattacactaaattatgtgattttctcaaattattaacggtgtcggcatgtcaatgcccgtg 32804617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 2731863 - 2731801
Alignment:
Q  2 acacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgt 66  Q
    ||||||||||||||||| ||||||||||||||||  || |||||  |||||||||||||||||||    
T  2731863 acacatataattacacttaattatgtgattttcttaaagtatta--agtatcggcatgtcagtgt 2731801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 11313808 - 11313861
Alignment:
Q  2 acacatataattacactgaattatgtgattttctagaattattagcagtatcgg 55  Q
    ||||||||||||||||| ||||||||||||||||  ||||||||||||| ||||    
T  11313808 acacatataattacactaaattatgtgattttctcaaattattagcagtgtcgg 11313861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 49505161 - 49505230
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgt 70  Q
    |||||||||||||||||| ||||||||||||||||  |||||||||| || || || |||| ||||||||    
T  49505161 gacacatataattacactaaattatgtgattttctcaaattattagcggtctctgcgtgtcggtgtccgt 49505230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 7928502 - 7928456
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagc 47  Q
    ||||||||||||||||||||||||||||||||| |  ||||||||||    
T  7928502 gacacatataattacactgaattatgtgattttttcaaattattagc 7928456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 24205048 - 24205118
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||| ||||||||||||| ||||||| |||||||  |||||||| | || ||||| ||||||||||||||    
T  24205048 gacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtg 24205118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 25093554 - 25093488
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    ||||||||||||||||||||||| |||||||||||  ||| |||| |||| ||||| ||| ||||||    
T  25093554 gacacatataattacactgaattgtgtgattttctcaaatcattaacagtgtcggcgtgttagtgtc 25093488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 28678355 - 28678289
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    |||||||| ||||| ||| |||||||||||||| |  ||||||||||||  ||||||||||||||||    
T  28678355 gacacatacaattatactaaattatgtgattttattaaattattagcagcgtcggcatgtcagtgtc 28678289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 4987306 - 4987363
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgt 66  Q
    ||||||||||||||||||||||||| |  |||||||||| || ||||| |||||||||    
T  4987306 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 4987363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 76
Target Start/End: Original strand, 5407260 - 5407329
Alignment:
Q  7 tataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtgcttca 76  Q
    |||||||||| ||||||||||||||||||  |||| ||||| || ||||| |||| || |||||||||||    
T  5407260 tataattacaatgaattatgtgattttctcaaatttttagcggtgtcggcgtgtcggtatccgtgcttca 5407329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 9624689 - 9624644
Alignment:
Q  5 catataattacactgaattatgtgattttctagaattattagcagt 50  Q
    |||||||||||| ||||||||||||||||||  |||||||||||||    
T  9624689 catataattacattgaattatgtgattttctcaaattattagcagt 9624644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 14832143 - 14832074
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtgcttcata 78  Q
    |||||||| ||| |||||||||||| |  |||||||||| |||||||| |||| || |||||||||||||    
T  14832143 taattacattgagttatgtgattttttcaaattattagctgtatcggcgtgtccgtatccgtgcttcata 14832074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 11252023 - 11251983
Alignment:
Q  8 ataattacactgaattatgtgattttctagaattattagca 48  Q
    ||||||||||||||||||||||||||||  |||||||||||    
T  11252023 ataattacactgaattatgtgattttctcaaattattagca 11251983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 40993342 - 40993374
Alignment:
Q  1 gacacatataattacactgaattatgtgatttt 33  Q
    |||||||||||||||||||||||||||||||||    
T  40993342 gacacatataattacactgaattatgtgatttt 40993374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 2941610 - 2941567
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattatt 44  Q
    ||||||||||||||||||| ||| ||||||||||||||| ||||    
T  2941610 gacacatataattacactgtattttgtgattttctagaaatatt 2941567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 45
Target Start/End: Original strand, 16192758 - 16192801
Alignment:
Q  2 acacatataattacactgaattatgtgattttctagaattatta 45  Q
    |||||||||||||||||||||||||| |||||||  ||||||||    
T  16192758 acacatataattacactgaattatgttattttctcaaattatta 16192801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 29508496 - 29508429
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtcc 68  Q
    ||||||||||||||||||||||||| ||||||| |  |||||||||  |||||||  ||||| |||||    
T  29508496 gacacatataattacactgaattatatgattttttcaaattattagtggtatcggtgtgtcaatgtcc 29508429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 30994895 - 30994938
Alignment:
Q  7 tataattacactgaattatgtgattttctagaattattagcagt 50  Q
    ||||||||||||||||| |||||||||||  |||||||||||||    
T  30994895 tataattacactgaattgtgtgattttcttaaattattagcagt 30994938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 35222990 - 35222955
Alignment:
Q  1 gacacatataattacactgaattatgtgattttcta 36  Q
    |||||||||||||||| |||||||||||||||||||    
T  35222990 gacacatataattacattgaattatgtgattttcta 35222955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 8039842 - 8039888
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagc 47  Q
    ||||||||||||||||||||||||| | |||||||  ||||||||||    
T  8039842 gacacatataattacactgaattatataattttctcaaattattagc 8039888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 8789557 - 8789591
Alignment:
Q  1 gacacatataattacactgaattatgtgattttct 35  Q
    ||||||||||||||||| |||||||||||||||||    
T  8789557 gacacatataattacacggaattatgtgattttct 8789591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 8842381 - 8842312
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    |||| ||||||||||||  ||||||||||||||| | |||||||||| || ||||||||||| | ||||||    
T  8842381 gacatatataattacaccaaattatgtgattttc-aaaattattagcggtgtcggcatgtcaatttccgtg 8842312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 10690269 - 10690303
Alignment:
Q  1 gacacatataattacactgaattatgtgattttct 35  Q
    |||| ||||||||||||||||||||||||||||||    
T  10690269 gacaaatataattacactgaattatgtgattttct 10690303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 35
Target Start/End: Original strand, 11493372 - 11493402
Alignment:
Q  5 catataattacactgaattatgtgattttct 35  Q
    |||||||||||||||||||||||||||||||    
T  11493372 catataattacactgaattatgtgattttct 11493402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 34
Target Start/End: Original strand, 11507485 - 11507515
Alignment:
Q  4 acatataattacactgaattatgtgattttc 34  Q
    |||||||||||||||||||||||||||||||    
T  11507485 acatataattacactgaattatgtgattttc 11507515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 12704056 - 12704014
Alignment:
Q  4 acatataattacactgaattatgtgattttctagaattattag 46  Q
    ||||||||||||||||||||||||| ||||||  |||||||||    
T  12704056 acatataattacactgaattatgtgcttttctcaaattattag 12704014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 14840304 - 14840342
Alignment:
Q  7 tataattacactgaattatgtgattttctagaattatta 45  Q
    |||||||||||||||||||||||||||||  ||||||||    
T  14840304 tataattacactgaattatgtgattttctgaaattatta 14840342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 21479162 - 21479104
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    ||||||||||||||| ||||||||| |  |||||||||| || ||||| ||||||||||    
T  21479162 taattacactgaattgtgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 21479104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 27277852 - 27277894
Alignment:
Q  8 ataattacactgaattatgtgattttctagaattattagcagt 50  Q
    ||||||||||| ||||||||||||||||  |||||||||||||    
T  27277852 ataattacactaaattatgtgattttctcaaattattagcagt 27277894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 28918045 - 28917983
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||||||||||||||||||| |  ||||||||||  | ||||| ||||||| ||||||    
T  28918045 taattacactgaattatgtgattttttcaaattattagctatgtcggcgtgtcagtttccgtg 28917983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 34307787 - 34307833
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagc 47  Q
    ||||| ||||||||||||||| |||||||||||||  ||||||||||    
T  34307787 gacacttataattacactgaaatatgtgattttctcaaattattagc 34307833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 4469897 - 4469836
Alignment:
Q  6 atataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    ||||| ||||||||||||||||||||||||  ||||||| || |||| ||| ||||| ||||    
T  4469897 atatacttacactgaattatgtgattttcttaaattattggcggtattggcgtgtcaatgtc 4469836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 14209157 - 14209120
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattag 46  Q
    ||||||||||||||||||||||||| || |||||||||    
T  14209157 taattacactgaattatgtgattttttaaaattattag 14209120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 18427001 - 18426932
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgt 70  Q
    |||| |||||||||||| ||||||||||||||| |  |||||||||  || ||||| |||| ||||||||    
T  18427001 gacatatataattacaccgaattatgtgattttttgaaattattagtggtgtcggcgtgtccgtgtccgt 18426932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 20691371 - 20691322
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagt 50  Q
    ||||||||| ||||||||||||||||| |||||||  |||||||| ||||    
T  20691371 gacacatatgattacactgaattatgtcattttctcaaattattatcagt 20691322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 71
Target Start/End: Complemental strand, 21720807 - 21720746
Alignment:
Q  10 aattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||||||||||| ||| ||||  |||||||| | || ||||| ||||||||||||||    
T  21720807 aattacactgaattatgagatattctcaaattattatcggtgtcggcgtgtcagtgtccgtg 21720746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 45451605 - 45451556
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagt 50  Q
    ||||||||| |||| |||||| |||||||||||||  |||||||||||||    
T  45451605 gacacatattattatactgaagtatgtgattttctcaaattattagcagt 45451556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 1830395 - 1830335
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtc 61  Q
    ||||| ||| ||||||||||||||||| |||||||  ||||||||  ||| ||||||||||    
T  1830395 gacacctatgattacactgaattatgtcattttcttaaattattaaaagtgtcggcatgtc 1830335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 7614422 - 7614466
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattatta 45  Q
    |||| ||||||||| ||||||||||||||||||||  ||||||||    
T  7614422 gacatatataattatactgaattatgtgattttcttaaattatta 7614466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 10954994 - 10954934
Alignment:
Q  11 attacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||||||||||||||||| |  |||||||||  || ||||| ||||||||| ||||    
T  10954994 attacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgttcgtg 10954934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 11658867 - 11658823
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattatta 45  Q
    |||||||||||| ||||||||||||| ||||||||  ||||||||    
T  11658867 gacacatataatcacactgaattatgcgattttctcaaattatta 11658823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 32429393 - 32429433
Alignment:
Q  7 tataattacactgaattatgtgattttctagaattattagc 47  Q
    ||||||| |||||||||||||||||||||  ||||||||||    
T  32429393 tataattgcactgaattatgtgattttcttaaattattagc 32429433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 49634052 - 49634012
Alignment:
Q  88 aactcaattttaactcaaattaattttacacaatcaattca 128  Q
    |||||| |||||||| |||||||||||||| ||||||||||    
T  49634052 aactcacttttaacttaaattaattttacaaaatcaattca 49634012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 49651801 - 49651853
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtc 61  Q
    |||||||| |||||||||||||||| |  |||||||||| || ||||||||||    
T  49651801 taattacagtgaattatgtgattttttcaaattattagccgtgtcggcatgtc 49651853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 5e-19; HSPs: 57)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 9025501 - 9025578
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtgcttcatagg 80  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||| ||  |||||| || |||||||||||||||    
T  9025501 gacacatataattacactgaattatgtgattttctcaaattattagcagtgtc--catgtccgtttccgtgcttcatagg 9025578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 7996389 - 7996452
Alignment:
Q  5 catataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtcc 68  Q
    ||||||||||||||||||||| |||||||||  ||||||||||||| |||||||||||||||||    
T  7996389 catataattacactgaattatatgattttctcaaattattagcagtgtcggcatgtcagtgtcc 7996452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 8022412 - 8022349
Alignment:
Q  5 catataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtcc 68  Q
    ||||||||||||||||||||| |||||||||  ||||||||||||| |||||||||||||||||    
T  8022412 catataattacactgaattatatgattttctcaaattattagcagtgtcggcatgtcagtgtcc 8022349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 9658931 - 9658861
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    |||| ||||||||||||||||||||||||||||||  |||||||||| || ||||| ||||||||||||||    
T  9658931 gacaaatataattacactgaattatgtgattttcttaaattattagcggtgtcggcgtgtcagtgtccgtg 9658861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 7265600 - 7265668
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccg 69  Q
    |||||||||||||||||||||||||||||||||||  |||||||||| || | ||| ||||||||||||    
T  7265600 gacacatataattacactgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccg 7265668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 19040404 - 19040341
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagt 64  Q
    |||||||||||||||||||||||||||||||||||  |||||||||| || ||||| |||||||    
T  19040404 gacacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagt 19040341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 26562741 - 26562670
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtgc 72  Q
    |||||||||||||||||||||||||||||||||||  |||| |||||||| ||||| |||| |||| |||||    
T  26562741 gacacatataattacactgaattatgtgattttctcaaatttttagcagtgtcggcgtgtccgtgttcgtgc 26562670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 9027230 - 9027160
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||||||||||| ||||||||||||| |||  |||||||||| || ||||| ||||||||||||||    
T  9027230 gacacatataattacacggaattatgtgattatctcaaattattagcggtgtcggcgtgtcagtgtccgtg 9027160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 10294159 - 10294089
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    |||||||||||||||| |||| |||| |||| |||  |||||||||| |||||||||||||||| ||||||    
T  10294159 gacacatataattacattgaaatatgcgattatctcaaattattagcggtatcggcatgtcagtatccgtg 10294089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 13851788 - 13851718
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    |||||||||||||||||||||||| || |||||||  |||||||||| || ||| | ||||||||||||||    
T  13851788 gacacatataattacactgaattacgttattttctcaaattattagcggtgtcgacgtgtcagtgtccgtg 13851718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 34073358 - 34073424
Alignment:
Q  5 catataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    |||||||||||||||||||||| ||||||||  ||||||||||  | | ||||||||||||||||||    
T  34073358 catataattacactgaattatgagattttctcaaattattagcgatgttggcatgtcagtgtccgtg 34073424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 7086847 - 7086798
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagt 50  Q
    |||||||||||||||||| ||||||||||||||||  |||||||||||||    
T  7086847 gacacatataattacactaaattatgtgattttctcaaattattagcagt 7086798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 13364712 - 13364773
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtca 62  Q
    ||||||||| ||||||||||||||| |||||||||  |||||| |||||| |||||||||||    
T  13364712 gacacatatgattacactgaattatatgattttctcaaattataagcagtgtcggcatgtca 13364773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 5732517 - 5732584
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtcc 68  Q
    |||||||||||||||||| || |||||||||||||  |||||||| | || ||||| |||||||||||    
T  5732517 gacacatataattacactaaaatatgtgattttctcaaattattaacggtgtcggcgtgtcagtgtcc 5732584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 16766741 - 16766682
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtcc 68  Q
    ||||||||||||||||||||||||| |  |||||||||| || ||||| |||||||||||    
T  16766741 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtcc 16766682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 19044516 - 19044449
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtcc 68  Q
    |||||||||||| ||||||||||||||||| ||||  |||||||||  || ||||| |||||||||||    
T  19044516 gacacatataataacactgaattatgtgatattctcaaattattagtcgtgtcggcgtgtcagtgtcc 19044449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 21924942 - 21924997
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggc 56  Q
    ||||||||||||||||||||||||| |||| ||||  ||||||||||||| |||||    
T  21924942 gacacatataattacactgaattatttgatattctcaaattattagcagtgtcggc 21924997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 9629435 - 9629365
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    |||||||||||||||| ||||||||||||||||||  ||||||| || || ||||| ||||| | ||||||    
T  9629435 gacacatataattacattgaattatgtgattttctcaaattattggcggtgtcggcgtgtcaatatccgtg 9629365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 11591877 - 11591911
Alignment:
Q  1 gacacatataattacactgaattatgtgattttct 35  Q
    |||||||||||||||||||||||||||||||||||    
T  11591877 gacacatataattacactgaattatgtgattttct 11591911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 12696368 - 12696306
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||||||||||||| ||||| |  |||||||||| || ||||| ||||||||||||||    
T  12696368 taattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 12696306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 17341671 - 17341741
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||| ||||||||||||||||||||||||||| |  |||||||| | || ||||| |||||||| |||||    
T  17341671 gacacttataattacactgaattatgtgattttatcaaattattaacggtgtcggcgtgtcagtgcccgtg 17341741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 17841604 - 17841666
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    |||||||||| |||||||||||||| |  |||||||||| || ||||| ||||||||||||||    
T  17841604 taattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 17841666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 20371117 - 20371187
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    |||||||||||| ||| ||| ||||||||||||||  |||||||||| || ||||| ||||| ||||||||    
T  20371117 gacacatataatcacattgagttatgtgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtg 20371187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 30866151 - 30866197
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagc 47  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||||    
T  30866151 gacacatataattacattgaattatgtgattttctcaaattattagc 30866197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 33001296 - 33001366
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    |||||||||||||||| | |||||||||||||| |  ||||||||||||| ||||| ||||| || |||||    
T  33001296 gacacatataattacatttaattatgtgattttttcaaattattagcagtgtcggcgtgtcattgaccgtg 33001366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 32511674 - 32511719
Alignment:
Q  2 acacatataattacactgaattatgtgattttctagaattattagc 47  Q
    |||| |||||||||||||||||||||||||||||  ||||||||||    
T  32511674 acacttataattacactgaattatgtgattttcttaaattattagc 32511719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 3398664 - 3398601
Alignment:
Q  7 tataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||||||||||||| ||||||| |  |||||||||| || ||||| ||||||||||||||    
T  3398664 tataattacactgaattatatgatttt-tcaaattattagctgtgtcggcgtgtcagtgtccgtg 3398601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 7027294 - 7027262
Alignment:
Q  1 gacacatataattacactgaattatgtgatttt 33  Q
    |||||||||||||||||||||||||||||||||    
T  7027294 gacacatataattacactgaattatgtgatttt 7027262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 9617486 - 9617442
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattatta 45  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||    
T  9617486 gacacatataattacattgaattatgtgattttctcaaattatta 9617442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 7938168 - 7938101
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtcc 68  Q
    ||||| |||||||||||| |||||| ||||||| |  |||||||||| || ||||| |||||||||||    
T  7938168 gacacttataattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtcc 7938101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 35
Target Start/End: Original strand, 13360382 - 13360413
Alignment:
Q  4 acatataattacactgaattatgtgattttct 35  Q
    ||||||||||||||||||||||||||||||||    
T  13360382 acatataattacactgaattatgtgattttct 13360413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 24833243 - 24833306
Alignment:
Q  4 acatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    ||||||||||||||| ||||||| ||||||||  | ||||||| ||| ||||| ||||||||||    
T  24833243 acatataattacactaaattatgcgattttcttaacttattagtagtgtcggcgtgtcagtgtc 24833306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 5000633 - 5000703
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    |||| ||| ||||| ||||||| |||||||||||| ||||||||||| || ||| | ||||||| ||||||    
T  5000633 gacatataaaattatactgaatcatgtgattttctcgaattattagcggtgtcgacgtgtcagtatccgtg 5000703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 7378031 - 7377997
Alignment:
Q  1 gacacatataattacactgaattatgtgattttct 35  Q
    |||||||||||||||| ||||||||||||||||||    
T  7378031 gacacatataattacattgaattatgtgattttct 7377997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 8776988 - 8777050
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||||||||| ||||||||| |  |||||||||  || ||||| ||||||||||||||    
T  8776988 taattacactgaattttgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtg 8777050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 50
Target Start/End: Original strand, 8805586 - 8805628
Alignment:
Q  8 ataattacactgaattatgtgattttctagaattattagcagt 50  Q
    ||||||||||| ||||||||||||||||  |||||||||||||    
T  8805586 ataattacactaaattatgtgattttctcaaattattagcagt 8805628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 9107385 - 9107447
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||||||||| ||||||||| |  |||||||||| || ||||| ||| ||||||||||    
T  9107385 taattacactgaattttgtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtg 9107447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 10339132 - 10339198
Alignment:
Q  1 gacacatataatta-cactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgt 66  Q
    |||||||||||||| |||||||||||||||||||||  ||||| | || || ||||| |||||||||    
T  10339132 gacacatataattaacactgaattatgtgattttctcaaattaatcgcggtgtcggcgtgtcagtgt 10339198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 10842584 - 10842518
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    ||||||||| |||||||| |||||||||||||| |  |||||||||| || ||||| |||| |||||    
T  10842584 gacacatatgattacactaaattatgtgattttttcaaattattagcggtgtcggcgtgtccgtgtc 10842518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 26178688 - 26178758
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||| |||||||| |||||||||||||| |  ||||||||| |||  |||| ||||| ||||||||    
T  26178688 gacacatatgattacactaaattatgtgattttatcaaattattagaagtgacggcttgtcaatgtccgtg 26178758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 28152142 - 28152081
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||||||||||||||||||| |  ||||||||||  | ||||| ||||||||||||||    
T  28152142 taattacactgaattatgtgatttt-tcaaattattagctttgtcggcgtgtcagtgtccgtg 28152081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 64
Target Start/End: Original strand, 32298615 - 32298677
Alignment:
Q  2 acacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagt 64  Q
    ||||||||||||||||| |||||||||||  |||  |||||||||| || | |||||||||||    
T  32298615 acacatataattacactaaattatgtgatgatcttaaattattagcggtgttggcatgtcagt 32298677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 34290091 - 34290149
Alignment:
Q  8 ataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgt 66  Q
    |||||||||||||||||||||||| ||   |||||||||  || |||||||||||||||    
T  34290091 ataattacactgaattatgtgattctcgcaaattattagttgtgtcggcatgtcagtgt 34290149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 34595178 - 34595116
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||||||||||||||||||| |  |||||||||  || ||||| ||||| ||||||||    
T  34595178 taattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcattgtccgtg 34595116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 9195761 - 9195806
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattag 46  Q
    |||||||||||||||||| |||||||| |||||||  |||||||||    
T  9195761 gacacatataattacactaaattatgtcattttctcaaattattag 9195806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 17302399 - 17302354
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattag 46  Q
    |||||||||||||||||  ||||||||||||||||  |||||||||    
T  17302399 gacacatataattacacaaaattatgtgattttcttaaattattag 17302354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 20576641 - 20576686
Alignment:
Q  2 acacatataattacactgaattatgtgattttctagaattattagc 47  Q
    |||| ||||||||||||||||||||  ||||||| |||||||||||    
T  20576641 acacttataattacactgaattatgcaattttctcgaattattagc 20576686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 8 - 45
Target Start/End: Original strand, 31579239 - 31579276
Alignment:
Q  8 ataattacactgaattatgtgattttctagaattatta 45  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  31579239 ataattacactgaattatgtgattttctcaaattatta 31579276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 1532290 - 1532246
Alignment:
Q  3 cacatataattacactgaattatgtgattttctagaattattagc 47  Q
    ||||||||||||||||||||||||| ||||| |  ||||||||||    
T  1532290 cacatataattacactgaattatgtaattttatcaaattattagc 1532246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 7151463 - 7151419
Alignment:
Q  2 acacatataattacactgaattatgtgattttctagaattattag 46  Q
    ||||||||||||||||| |||||||||||||| |  |||||||||    
T  7151463 acacatataattacacttaattatgtgattttttcaaattattag 7151419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 10760870 - 10760926
Alignment:
Q  23 tatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtgcttcatag 79  Q
    ||||| |||||||  |||||||| |||| ||| | ||||||||||||||||||||||    
T  10760870 tatgtcattttctcaaattattatcagtgtcgacgtgtcagtgtccgtgcttcatag 10760926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 12627584 - 12627616
Alignment:
Q  1 gacacatataattacactgaattatgtgatttt 33  Q
    ||||||||| |||||||||||||||||||||||    
T  12627584 gacacatattattacactgaattatgtgatttt 12627616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 12686408 - 12686455
Alignment:
Q  7 tataattacactgaattatgtgattttctagaattattagcagtatcgg 55  Q
    |||||||||||||||| ||||||||||||  ||||||||||||| ||||    
T  12686408 tataattacactgaat-atgtgattttcttaaattattagcagtgtcgg 12686455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 16388246 - 16388309
Alignment:
Q  7 tataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||||||||||||||||||||| |  ||||||| ||  ||||| | ||||||||||||||    
T  16388246 tataattacactgaattatgtgattttttcaaattatttgc-ttatcgacgtgtcagtgtccgtg 16388309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 16488597 - 16488657
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtc 61  Q
    ||||||||||||||||||| ||| |||||||||||| ||  |||||| || ||||| ||||    
T  16488597 gacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtc 16488657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 18367888 - 18367828
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtc 61  Q
    ||||||||||||||||||| ||| |||||||||||| ||  |||||| || ||||| ||||    
T  18367888 gacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtc 18367828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 30851652 - 30851599
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggc 56  Q
    |||||||||||||||| ||||||  ||||||||||  ||||||||||||| |||||    
T  30851652 gacacatataattacattgaatt--gtgattttcttaaattattagcagtgtcggc 30851599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 3966555 - 3966488
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtcc 68  Q
    ||||||||||||||||||||||| |||||||||||  |||||||||| || |||||||||||||||||    
T  3966555 gacacatataattacactgaattgtgtgattttctcaaattattagcggtgtcggcatgtcagtgtcc 3966488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 16203802 - 16203872
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    |||||||||||||||||| ||||||| ||||||||  ||||||||||||| ||||||||| ||||||||||    
T  16203802 gacacatataattacactaaattatgagattttctcaaattattagcagtgtcggcatgttagtgtccgtg 16203872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 21191071 - 21191133
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||||||||||||||||||| |  |||||||||| || ||||||||||||||||||||    
T  21191071 taattacactgaattatgtgattttttcaaattattagctgtgtcggcatgtcagtgtccgtg 21191133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 11685991 - 11685925
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    |||||||||||||||||| ||||||| || |||||  |||||||||| || ||||||||||||||||    
T  11685991 gacacatataattacactaaattatgcgactttctcaaattattagcggtgtcggcatgtcagtgtc 11685925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 21522794 - 21522732
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||||||||||||| ||||| || |||||||||| || ||||| ||||||||||||||    
T  21522794 taattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtg 21522732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 21533360 - 21533298
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||||||||||||| ||||| || |||||||||| || ||||| ||||||||||||||    
T  21533360 taattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtg 21533298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 27144515 - 27144449
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    |||||||||||||||||| ||||||||||||| ||  |||||||||| || ||||| ||||||||||    
T  27144515 gacacatataattacactaaattatgtgatttcctcaaattattagcggtgtcggcgtgtcagtgtc 27144449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 43001844 - 43001782
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||||||||||||| ||||| |  ||||||||||||| ||| ||||||||||||||||    
T  43001844 taattacactgaattatgtaattttttcaaattattagcagtgtcgacatgtcagtgtccgtg 43001782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 6471897 - 6471942
Alignment:
Q  2 acacatataattacactgaattatgtgattttctagaattattagc 47  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||    
T  6471897 acacatataattacactgaattatgtgattttctcaaattattagc 6471942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 41091264 - 41091313
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagt 50  Q
    |||||||||||||||||||||||||||||||||||  ||| |||||||||    
T  41091264 gacacatataattacactgaattatgtgattttctcaaatcattagcagt 41091313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 26312818 - 26312754
Alignment:
Q  4 acatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtcc 68  Q
    |||||||||||||||||||||  |||||||||  ||||||| || |||||||||| |||||||||    
T  26312818 acatataattacactgaattaattgattttctcaaattatttgcggtatcggcatatcagtgtcc 26312754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 39758324 - 39758289
Alignment:
Q  1 gacacatataattacactgaattatgtgattttcta 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  39758324 gacacatataattacactgaattatgtgattttcta 39758289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 12264836 - 12264902
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    |||||||||||||||||||||| |||| |||||||  ||| |||||| || | ||||||||||||||    
T  12264836 gacacatataattacactgaatcatgtaattttctcaaataattagcggtgttggcatgtcagtgtc 12264902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 14674313 - 14674251
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    |||||||||| |||||||||||||| |  |||||||||| || ||||| ||||||||||||||    
T  14674313 taattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 14674251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 30502395 - 30502441
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagc 47  Q
    |||||||||||||||||||||||| ||||||||||  ||||||||||    
T  30502395 gacacatataattacactgaattaagtgattttctcaaattattagc 30502441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 30542738 - 30542784
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagc 47  Q
    |||||||||||||||||||||||| ||||||||||  ||||||||||    
T  30542738 gacacatataattacactgaattaagtgattttctcaaattattagc 30542784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 14422948 - 14422889
Alignment:
Q  7 tataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtcc 68  Q
    ||||||||||||||||||||||||||| || |||||||||| |||||||  |||||||||||    
T  14422948 tataattacactgaattatgtgatttt-ta-aattattagctgtatcggtgtgtcagtgtcc 14422889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 15410456 - 15410525
Alignment:
Q  2 acacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    |||||||| |||||||||||| || | |||||||  |||||||||| || ||||| ||||||||||||||    
T  15410456 acacatatgattacactgaatcatataattttcttaaattattagcggtgtcggcgtgtcagtgtccgtg 15410525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 18421848 - 18421897
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagt 50  Q
    ||||||||||||||||||| |||||||||||||||  |||||| ||||||    
T  18421848 gacacatataattacactggattatgtgattttctcaaattatcagcagt 18421897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 82
Target Start/End: Original strand, 21351920 - 21351993
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtgcttcataggtt 82  Q
    ||||||||||||||||||||| ||| |  |||||||||  || ||||  ||||||||||| |||||||||||||    
T  21351920 taattacactgaattatgtgactttttccaattattagttgtgtcggtgtgtcagtgtccatgcttcataggtt 21351993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 28588681 - 28588742
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtca 62  Q
    ||||| |||||||||||||||||||||||||||||  |||||||| | || ||||| |||||    
T  28588681 gacacctataattacactgaattatgtgattttctcaaattattaccggtgtcggcgtgtca 28588742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 39698585 - 39698524
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgt 70  Q
    ||||||||||||||||||||||||| |  |||||||||| || || || |||||||||||||    
T  39698585 taattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtgtccgt 39698524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 35
Target Start/End: Original strand, 24273039 - 24273071
Alignment:
Q  3 cacatataattacactgaattatgtgattttct 35  Q
    |||||||||||||||||||||||||||||||||    
T  24273039 cacatataattacactgaattatgtgattttct 24273071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 35
Target Start/End: Complemental strand, 24389175 - 24389143
Alignment:
Q  3 cacatataattacactgaattatgtgattttct 35  Q
    |||||||||||||||||||||||||||||||||    
T  24389175 cacatataattacactgaattatgtgattttct 24389143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 26716178 - 26716130
Alignment:
Q  19 gaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    |||||||||||||||||  ||||||||||||| ||||||||||| ||||    
T  26716178 gaattatgtgattttctcaaattattagcagtgtcggcatgtcaatgtc 26716130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 67
Target Start/End: Complemental strand, 26985918 - 26985870
Alignment:
Q  19 gaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    |||||||||||||||||  ||||||||||||| ||||||||||| ||||    
T  26985918 gaattatgtgattttctcaaattattagcagtgtcggcatgtcaatgtc 26985870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 18592123 - 18592060
Alignment:
Q  3 cacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgt 66  Q
    |||||||||||||| |||||||||| |||||||  || ||||||| || ||||||| |||||||    
T  18592123 cacatataattacattgaattatgtaattttcttaaaatattagcggtgtcggcatatcagtgt 18592060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 5467985 - 5468051
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    ||||| ||||||||||||||||||||||||||| |  |||||||| | |||| | | ||||||||||    
T  5467985 gacacctataattacactgaattatgtgattttatcaaattattatcggtattgacgtgtcagtgtc 5468051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 6326312 - 6326374
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||||||||||||| |||||||  ||||| ||||  | ||||| ||||||||||||||    
T  6326312 taattacactgaattatgtaattttctcaaattactagcgatgtcggcgtgtcagtgtccgtg 6326374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 19579745 - 19579683
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||| |||| ||||||||||||||||  |||||||||| || ||||| | ||||||||||||    
T  19579745 taattgcactaaattatgtgattttctcaaattattagctgtgtcggcgtatcagtgtccgtg 19579683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 23015996 - 23016030
Alignment:
Q  1 gacacatataattacactgaattatgtgattttct 35  Q
    ||||| |||||||||||||||||||||||||||||    
T  23015996 gacacctataattacactgaattatgtgattttct 23016030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 69
Target Start/End: Complemental strand, 30098372 - 30098310
Alignment:
Q  7 tataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccg 69  Q
    |||||||||| ||||||||||||||||||  |||||||| | || ||| | ||||||||||||    
T  30098372 tataattacattgaattatgtgattttctcaaattattaacggtttcgtcgtgtcagtgtccg 30098310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 31084367 - 31084309
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    |||||||| |||||||||||||||| |  |||||||||| || ||||| ||||||||||    
T  31084367 taattacattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 31084309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 36838595 - 36838549
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagc 47  Q
    |||||||||||||||||| |||||||| |||||||  ||||||||||    
T  36838595 gacacatataattacactaaattatgtaattttctcaaattattagc 36838549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 41995515 - 41995457
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    |||||||| |||||||||||||||| | ||||||||||  || ||||| ||||||||||    
T  41995515 taattacattgaattatgtgattttttcgaattattagttgtgtcggcgtgtcagtgtc 41995457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 6247666 - 6247609
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgt 66  Q
    ||||||||||||||||||||||||| |  |||||||||  || ||||| |||||||||    
T  6247666 taattacactgaattatgtgattttttcaaattattagatgtgtcggcgtgtcagtgt 6247609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 17593734 - 17593775
Alignment:
Q  6 atataattacactgaattatgtgattttctagaattattagc 47  Q
    ||||||||||||||||||| ||||||||||  ||||||||||    
T  17593734 atataattacactgaattacgtgattttctcaaattattagc 17593775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 35017085 - 35017044
Alignment:
Q  5 catataattacactgaattatgtgattttctagaattattag 46  Q
    |||||||||||||| ||||||||||||||||  |||||||||    
T  35017085 catataattacactaaattatgtgattttctcaaattattag 35017044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 39205931 - 39205866
Alignment:
Q  2 acacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    ||||||||||||||||  |||||| |||||||||  ||||||||||||| ||| | |||| |||||    
T  39205931 acacatataattacacctaattatatgattttctcaaattattagcagtgtcgacgtgtccgtgtc 39205866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 40000555 - 40000612
Alignment:
Q  14 acactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    |||||||||||||||||||| |  ||||||||  ||| ||| ||||||||||||||||    
T  40000555 acactgaattatgtgattttttcaaattattaagagtgtcgacatgtcagtgtccgtg 40000612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 17925179 - 17925223
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattatta 45  Q
    ||||||||| |||||| ||||||||||||||||||  ||||||||    
T  17925179 gacacatattattacattgaattatgtgattttcttaaattatta 17925223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 21814313 - 21814253
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtc 61  Q
    ||||||||||||||||||| ||| |||||||||||| ||  |||||| || ||||| ||||    
T  21814313 gacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtc 21814253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 22013460 - 22013396
Alignment:
Q  7 tataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    |||||||||||| |||||||| |||||    |||||||||| || ||||| ||||||||||||||    
T  22013460 tataattacactaaattatgtaatttttccaaattattagctgtgtcggcgtgtcagtgtccgtg 22013396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 36
Target Start/End: Complemental strand, 42029801 - 42029769
Alignment:
Q  4 acatataattacactgaattatgtgattttcta 36  Q
    ||||||||||||| |||||||||||||||||||    
T  42029801 acatataattacattgaattatgtgattttcta 42029769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 3e-17; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 17851483 - 17851430
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcg 54  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  17851483 gacacatataattacactgaattatgtgattttctaaaattattagcggtatcg 17851430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 79
Target Start/End: Complemental strand, 1401071 - 1400999
Alignment:
Q  7 tataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtgcttcatag 79  Q
    ||||||||||||||||||||||| |||||  ||||||||||  |||| || ||||||||||||||||||||||    
T  1401071 tataattacactgaattatgtgagtttctcaaattattagcgatatcagcgtgtcagtgtccgtgcttcatag 1400999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 32308172 - 32308105
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtcc 68  Q
    |||||||| ||||||||||||||||||||||||||  |||||||||| || ||||| |||||||||||    
T  32308172 gacacatacaattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtcc 32308105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 18013081 - 18013151
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||||||||||||||||||||| ||||| |  ||||||||| ||| || | |||||||||||||||    
T  18013081 gacacatataattacactgaattatgtaatttttttaaattattagtagtgtcagaatgtcagtgtccgtg 18013151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 22484077 - 22484011
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    |||||||||||||| |||||||||||  |||||||| |||||||||| || ||||| ||||||||||    
T  22484077 gacacatataattatactgaattatgcaattttctaaaattattagcggtgtcggcgtgtcagtgtc 22484011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 22868094 - 22868028
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    |||||||||||||||||||||||||||||||||||   ||||||||  || ||||| ||||||||||    
T  22868094 gacacatataattacactgaattatgtgattttctcatattattagtggtgtcggcgtgtcagtgtc 22868028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 7328698 - 7328751
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcg 54  Q
    |||||||||||||||||| |||||||| |||||||  |||||||||||||||||    
T  7328698 gacacatataattacactaaattatgttattttctcaaattattagcagtatcg 7328751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 20549843 - 20549778
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgt 66  Q
    |||||||||||||||||||||||| ||||||||||  |||||||||| || ||||  |||||||||    
T  20549843 gacacatataattacactgaattacgtgattttctcaaattattagcggtgtcggtgtgtcagtgt 20549778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 2948735 - 2948672
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagt 64  Q
    |||||||||||||||||| ||||| ||||||||||| |||||| ||| || ||||| |||||||    
T  2948735 gacacatataattacactaaattacgtgattttctaaaattatcagcggtgtcggcgtgtcagt 2948672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 24146868 - 24146821
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagca 48  Q
    |||||||||||||| | ||||||||||||||||||| |||||||||||    
T  24146868 gacacatataattatattgaattatgtgattttctaaaattattagca 24146821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 29787383 - 29787446
Alignment:
Q  8 ataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||||||||||||||||||||||  |||||||||| || ||||| ||| | ||||||||    
T  29787383 ataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgttaatgtccgtg 29787446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 3721145 - 3721076
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    |||||||||||||| ||| ||||||||||||||||  ||||||||||| | |||  |||||||||||||||    
T  3721145 gacacatataattatactaaattatgtgattttctcaaattattagca-tgtcgaaatgtcagtgtccgtg 3721076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 6630919 - 6630985
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    |||||||||||||||||||||||| |||| |||||  |||||||||  || ||||| ||||||||||    
T  6630919 gacacatataattacactgaattaagtgactttctcaaattattagtggtgtcggcgtgtcagtgtc 6630985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 15902874 - 15902808
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    |||||||||||||||||| |||||||||||||| |  ||||||||   || ||||||||||||||||    
T  15902874 gacacatataattacactaaattatgtgattttatcaaattattattggtgtcggcatgtcagtgtc 15902808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 19206102 - 19206032
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    |||||||||||||| | ||||||||||||||||||  |||||||||| || ||||| |||  |||||||||    
T  19206102 gacacatataattataatgaattatgtgattttctcaaattattagcggtgtcggcgtgttggtgtccgtg 19206032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 22602717 - 22602751
Alignment:
Q  1 gacacatataattacactgaattatgtgattttct 35  Q
    |||||||||||||||||||||||||||||||||||    
T  22602717 gacacatataattacactgaattatgtgattttct 22602751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 23191945 - 23191879
Alignment:
Q  4 acatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgt 70  Q
    |||| ||||||||||||| |||||||||||||  |||||||||| || ||||| | |||||||||||    
T  23191945 acatgtaattacactgaaatatgtgattttctcaaattattagcggtgtcggcgtatcagtgtccgt 23191879  T

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Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 26733356 - 26733286
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||| |||||| |||||||||||||||||| |  |||||||||| || ||| | ||||||||||||||    
T  26733356 gacacatttaattagactgaattatgtgattttgtcaaattattagcggtgtcgacgtgtcagtgtccgtg 26733286  T

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Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 27945085 - 27945023
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||||||||||||| |||||||  |||||||||  || ||||| ||||||||||||||    
T  27945085 taattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtg 27945023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 43250045 - 43249975
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||| ||||||||||||| ||||||| |||||||  |||||||| | || ||||| ||||||||||||||    
T  43250045 gacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtg 43249975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 5233680 - 5233615
Alignment:
Q  2 acacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    |||||||||||||||||  |||||||||||||||  |||||||| | |||||||  ||||||||||    
T  5233680 acacatataattacactagattatgtgattttctcaaattattaaccgtatcggtgtgtcagtgtc 5233615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 5548728 - 5548671
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcat 58  Q
    ||||||||||||||||||||||||| |||||||||  |||||| ||| || |||||||    
T  5548728 gacacatataattacactgaattatttgattttctcaaattatcagcggtgtcggcat 5548671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 9482986 - 9482917
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgt 70  Q
    ||||||||||||||||||||||| |||||||||||  |||||| |||  | ||||  |||||||||||||    
T  9482986 gacacatataattacactgaattgtgtgattttctcaaattatcagcgatgtcggtgtgtcagtgtccgt 9482917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 12278887 - 12278838
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagt 50  Q
    ||||||||||||||||||||||||||| |||||||  |||||||| ||||    
T  12278887 gacacatataattacactgaattatgtcattttcttaaattattatcagt 12278838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 27732246 - 27732290
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattatta 45  Q
    ||||||||||||||||||||||||||| |||||||  ||||||||    
T  27732246 gacacatataattacactgaattatgtaattttcttaaattatta 27732290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 640165 - 640134
Alignment:
Q  1 gacacatataattacactgaattatgtgattt 32  Q
    ||||||||||||||||||||||||||||||||    
T  640165 gacacatataattacactgaattatgtgattt 640134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 47
Target Start/End: Complemental strand, 2424659 - 2424620
Alignment:
Q  8 ataattacactgaattatgtgattttctagaattattagc 47  Q
    ||||||||||||||||||||||||||||  ||||||||||    
T  2424659 ataattacactgaattatgtgattttctcaaattattagc 2424620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 5409851 - 5409910
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtcc 68  Q
    ||||| ||||||||||||||||||| |  |||||||||| ||||| || |||||||||||    
T  5409851 taattgcactgaattatgtgattttttcaaattattagctgtatcagcgtgtcagtgtcc 5409910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 15680861 - 15680794
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtcc 68  Q
    ||||| |||||||||||| |||||||||||||| |  ||||||||||  | ||||| |||||||||||    
T  15680861 gacacttataattacactaaattatgtgattttttttaattattagctatgtcggcgtgtcagtgtcc 15680794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 16341546 - 16341499
Alignment:
Q  3 cacatataattacactgaattatgtgattttctagaattattagcagt 50  Q
    |||||||||||||||| ||||||||||||||||  |||||||| ||||    
T  16341546 cacatataattacacttaattatgtgattttctcaaattattatcagt 16341499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 18213040 - 18213075
Alignment:
Q  1 gacacatataattacactgaattatgtgattttcta 36  Q
    |||||||||||||||||| |||||||||||||||||    
T  18213040 gacacatataattacactaaattatgtgattttcta 18213075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 24339686 - 24339627
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtcc 68  Q
    ||||||||||||||||||||||||| |  |||||||||| || ||||| ||||| |||||    
T  24339686 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcaatgtcc 24339627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 25481946 - 25481887
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtcc 68  Q
    ||||||||||||||||||||||||| |  |||||||||| || ||||| ||||| |||||    
T  25481946 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtcc 25481887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 39138496 - 39138461
Alignment:
Q  1 gacacatataattacactgaattatgtgattttcta 36  Q
    |||| |||||||||||||||||||||||||||||||    
T  39138496 gacatatataattacactgaattatgtgattttcta 39138461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 1433506 - 1433436
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    |||||||||||||||||  ||| ||||||||||||  |||||||| | || ||||| ||||| ||||||||    
T  1433506 gacacatataattacaccaaatgatgtgattttctcaaattattaacggtgtcggcgtgtcaatgtccgtg 1433436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 5835299 - 5835265
Alignment:
Q  1 gacacatataattacactgaattatgtgattttct 35  Q
    ||||||||||||||||||||||||||| |||||||    
T  5835299 gacacatataattacactgaattatgttattttct 5835265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 5956324 - 5956262
Alignment:
Q  2 acacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagt 64  Q
    ||||||||||||||| | |||||| ||||||| |  ||||||||| ||||||||| |||||||    
T  5956324 acacatataattacattaaattatttgatttttttaaattattaggagtatcggcgtgtcagt 5956262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 10377555 - 10377489
Alignment:
Q  5 catataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||||||||||||||| |||||||||   ||||||| |||| ||||| || |||| ||||||    
T  10377555 catataattacactgaattatatgattttcttatattattaacagtgtcggcctgccagtatccgtg 10377489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 71
Target Start/End: Original strand, 11722121 - 11722175
Alignment:
Q  17 ctgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    |||||||||||||||||||  |||| ||||| || ||||| ||||||||||||||    
T  11722121 ctgaattatgtgattttctcaaattgttagcggtgtcggcgtgtcagtgtccgtg 11722175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 12289159 - 12289117
Alignment:
Q  8 ataattacactgaattatgtgattttctagaattattagcagt 50  Q
    |||||| |||||||||||||||||||||  |||||||||||||    
T  12289159 ataattccactgaattatgtgattttctcaaattattagcagt 12289117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 13770735 - 13770673
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||||||||||||| ||||| |  |||||||||| || ||||| | ||||||||||||    
T  13770735 taattacactgaattatgtaatttttttaaattattagctgtgtcggcgtatcagtgtccgtg 13770673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 19992053 - 19992007
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagc 47  Q
    ||||| ||||||||||||||| |||||||||||||  ||||||||||    
T  19992053 gacacttataattacactgaaatatgtgattttctcaaattattagc 19992007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 21828412 - 21828482
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    |||||||| ||||||| || |||||||||||||||  ||||| || | || ||||| ||||||||||||||    
T  21828412 gacacatacaattacaatggattatgtgattttctcaaattactaacggtgtcggcgtgtcagtgtccgtg 21828482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 26329389 - 26329455
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    ||||||||||||||||||||||| |||| ||||||  |||||||| |  | ||||| ||||||||||    
T  26329389 gacacatataattacactgaattgtgtgtttttctcaaattattaacgatgtcggcgtgtcagtgtc 26329455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 27093424 - 27093466
Alignment:
Q  5 catataattacactgaattatgtgattttctagaattattagc 47  Q
    |||||||||||||| ||||||||||||||||  ||||||||||    
T  27093424 catataattacactaaattatgtgattttcttaaattattagc 27093466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 27184877 - 27184835
Alignment:
Q  5 catataattacactgaattatgtgattttctagaattattagc 47  Q
    |||||||||||||| ||||||||||||||||  ||||||||||    
T  27184877 catataattacactaaattatgtgattttcttaaattattagc 27184835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 7438750 - 7438693
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgt 66  Q
    |||||||| |||||||||||||||| |  |||||||| | || |||||||||||||||    
T  7438750 taattacattgaattatgtgattttttcaaattattaactgtgtcggcatgtcagtgt 7438693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 8160467 - 8160422
Alignment:
Q  2 acacatataattacactgaattatgtgattttctagaattattagc 47  Q
    ||||||||||||||||| |||||||| |||||||  ||||||||||    
T  8160467 acacatataattacactaaattatgtaattttcttaaattattagc 8160422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 35
Target Start/End: Complemental strand, 17307944 - 17307911
Alignment:
Q  2 acacatataattacactgaattatgtgattttct 35  Q
    |||||||||||||||||||||||||| |||||||    
T  17307944 acacatataattacactgaattatgttattttct 17307911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 8239057 - 8239101
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattatta 45  Q
    |||||||||||||||||||||||||  ||||||||  ||||||||    
T  8239057 gacacatataattacactgaattataagattttcttaaattatta 8239101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 23849465 - 23849509
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattatta 45  Q
    |||||||||||||| ||||||||||||| ||||||  ||||||||    
T  23849465 gacacatataattatactgaattatgtgtttttcttaaattatta 23849509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 3e-17; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 21616813 - 21616744
Alignment:
Q  2 acacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||||||||||||||||||||||||||||  |||||||||| || ||||| |||| |||||||||    
T  21616813 acacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtccgtgtccgtg 21616744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 21782832 - 21782890
Alignment:
Q  8 ataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgt 66  Q
    ||||||||||||||||||||||||||||  ||||||||||||| ||||| |||||||||    
T  21782832 ataattacactgaattatgtgattttctcaaattattagcagtgtcggcgtgtcagtgt 21782890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 23718078 - 23718008
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||||||||||||||||||||||| |||||  |||||||||| || ||||  ||||||||||||||    
T  23718078 gacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtg 23718008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 24105750 - 24105680
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||||||||||||||||||||||| |||||  |||||||||| || ||||  ||||||||||||||    
T  24105750 gacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtg 24105680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 37411251 - 37411313
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcag 63  Q
    |||||||||||| ||||||||||||||||||||||  |||||||||| || ||||||||||||    
T  37411251 gacacatataatcacactgaattatgtgattttctcaaattattagcggtgtcggcatgtcag 37411313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 20242734 - 20242801
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtcc 68  Q
    |||||||||||||||||||||||||||||||||||| ||  |||||  || ||||| |||||||||||    
T  20242734 gacacatataattacactgaattatgtgattttctaaaaaaattagttgtgtcggcgtgtcagtgtcc 20242801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 18276573 - 18276507
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    |||||| ||||||||||||||||| ||||||||||  |||||||||| || ||||||| ||||||||    
T  18276573 gacacacataattacactgaattaagtgattttctcaaattattagcggtgtcggcatatcagtgtc 18276507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 31808129 - 31808063
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    ||||||||||||||||||||||||||||||||| |  |||||||||| || ||||  ||||||||||    
T  31808129 gacacatataattacactgaattatgtgattttgttaaattattagcggtgtcggtgtgtcagtgtc 31808063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 35449565 - 35449500
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgt 66  Q
    ||||||||||||||||||||||| |||||||||||  |||||||| |||| | ||| |||||||||    
T  35449565 gacacatataattacactgaattctgtgattttctcaaattattaacagtgttggcttgtcagtgt 35449500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 15909641 - 15909705
Alignment:
Q  3 cacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    ||||||||||||||||||||||||| |||||||  || | ||||| |||||||| ||||||||||    
T  15909641 cacatataattacactgaattatgtaattttctcaaaattttagctgtatcggcgtgtcagtgtc 15909705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 2665897 - 2665940
Alignment:
Q  3 cacatataattacactgaattatgtgattttctagaattattag 46  Q
    |||||||||||||||| ||||||||||||||||| |||||||||    
T  2665897 cacatataattacactaaattatgtgattttctaaaattattag 2665940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 24894433 - 24894371
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||| ||||||||||||||||||| |  |||||||||| || ||||| ||||||||||||||    
T  24894433 taattgcactgaattatgtgatttttttaaattattagctgtgtcggcgtgtcagtgtccgtg 24894371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 30404865 - 30404927
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||||||||||||||||||| |  |||||||| | || ||||| ||||||||||||||    
T  30404865 taattacactgaattatgtgattttttcaaattattaaccgtgtcggcgtgtcagtgtccgtg 30404927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 34784989 - 34785059
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    |||||||||||||||||| ||||||||||||||||| ||  |||||  || ||||  ||||||||||||||    
T  34784989 gacacatataattacactaaattatgtgattttctaaaaaaattagttgtgtcggtgtgtcagtgtccgtg 34785059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 44860372 - 44860326
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagc 47  Q
    |||||||||||||||||||||||||| ||||||||  ||||||||||    
T  44860372 gacacatataattacactgaattatgcgattttctcaaattattagc 44860326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 896263 - 896198
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgt 66  Q
    ||||||||| |||||| |||| |||||||||||||  || |||||||||| ||||| |||||||||    
T  896263 gacacatatgattacattgaaatatgtgattttctcaaactattagcagtgtcggcgtgtcagtgt 896198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 5367244 - 5367199
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattag 46  Q
    |||||||||||||||||||||||||||||||| ||  |||||||||    
T  5367244 gacacatataattacactgaattatgtgatttcctcaaattattag 5367199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 34691812 - 34691869
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcat 58  Q
    ||||||||||||||||||||||||| ||||||| |  |||||||||| |||| |||||    
T  34691812 gacacatataattacactgaattatatgattttatcaaattattagcggtatgggcat 34691869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 34714224 - 34714281
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcat 58  Q
    ||||||||||||||||||||||||| ||||||| |  |||||||||| |||| |||||    
T  34714224 gacacatataattacactgaattatatgattttatcaaattattagcggtatgggcat 34714281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 16069263 - 16069331
Alignment:
Q  3 cacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    |||| |||||||||||||||||| ||||||| |  |||||||| | || ||||| ||||||||||||||    
T  16069263 cacaaataattacactgaattatatgatttttttaaattattaacggtgtcggcgtgtcagtgtccgtg 16069331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 28677958 - 28677906
Alignment:
Q  4 acatataattacactgaattatgtgattttctagaattattagcagtatcggc 56  Q
    |||||||||||||||||||||||||||||| |  |||||||||| || |||||    
T  28677958 acatataattacactgaattatgtgattttttcaaattattagcggtgtcggc 28677906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 18420441 - 18420504
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagt 64  Q
    ||||| ||||||| || ||||||||||||||||||  ||||||||||||| | ||| |||||||    
T  18420441 gacacttataattgcattgaattatgtgattttctcaaattattagcagtgttggcgtgtcagt 18420504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 20922935 - 20922970
Alignment:
Q  1 gacacatataattacactgaattatgtgattttcta 36  Q
    |||||||||||||||||| |||||||||||||||||    
T  20922935 gacacatataattacactaaattatgtgattttcta 20922970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 28524478 - 28524447
Alignment:
Q  1 gacacatataattacactgaattatgtgattt 32  Q
    ||||||||||||||||||||||||||||||||    
T  28524478 gacacatataattacactgaattatgtgattt 28524447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 31018642 - 31018575
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtcc 68  Q
    ||||| |||||||||||| ||| ||||||||||||  |||||||||| || | ||| |||||||||||    
T  31018642 gacacctataattacactaaatcatgtgattttctgaaattattagcggtgttggcgtgtcagtgtcc 31018575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 31284093 - 31284030
Alignment:
Q  8 ataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||| || |||||||||||||||  ||||||||||||| ||||| ||| ||||| ||||    
T  31284093 ataattacaatggattatgtgattttctcaaattattagcagtgtcggcgtgtaagtgtacgtg 31284030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 6940299 - 6940237
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    |||||||||| |||||||| | ||| || |||||||||| || ||||| ||||||||||||||    
T  6940299 taattacacttaattatgtaactttttaaaattattagctgtgtcggcgtgtcagtgtccgtg 6940237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 18889598 - 18889632
Alignment:
Q  1 gacacatataattacactgaattatgtgattttct 35  Q
    ||||||||| |||||||||||||||||||||||||    
T  18889598 gacacatatgattacactgaattatgtgattttct 18889632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 21374714 - 21374776
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||||||||||||| ||||| |  |||||||||| || ||||| ||| ||||||||||    
T  21374714 taattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgttagtgtccgtg 21374776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 30527602 - 30527668
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    |||||||||||||||||| |||||| |||||||||  |||||||| |||| | ||  ||||||||||    
T  30527602 gacacatataattacactaaattatatgattttctcaaattattaacagtgtgggtgtgtcagtgtc 30527668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 30717545 - 30717607
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||||||||||||||||||| |  ||||||||||  | ||||  ||||||||||||||    
T  30717545 taattacactgaattatgtgattttttcaaattattagctttgtcggtttgtcagtgtccgtg 30717607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 37559021 - 37558959
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    |||||||| ||||||||||||||||    |||||||||| || ||||| ||||||||||||||    
T  37559021 taattacattgaattatgtgatttttacaaattattagctgtgtcggcgtgtcagtgtccgtg 37558959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 38355894 - 38355928
Alignment:
Q  1 gacacatataattacactgaattatgtgattttct 35  Q
    |||||||||||| ||||||||||||||||||||||    
T  38355894 gacacatataatcacactgaattatgtgattttct 38355928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 39279727 - 39279693
Alignment:
Q  1 gacacatataattacactgaattatgtgattttct 35  Q
    ||||||||||||||||||||||||| |||||||||    
T  39279727 gacacatataattacactgaattatttgattttct 39279693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 21091767 - 21091706
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgt 70  Q
    ||||||||||||| ||||| |||||||  |||||||||| || ||||  |||||||||||||    
T  21091767 taattacactgaagtatgttattttcttaaattattagcggtgtcggtgtgtcagtgtccgt 21091706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 36281734 - 36281669
Alignment:
Q  4 acatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccg 69  Q
    |||||| |||||||| ||||||||||||||||  |||||||| | |||| |||||||  |||||||    
T  36281734 acatatgattacactaaattatgtgattttctcaaattattaacggtattggcatgttggtgtccg 36281669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 4332971 - 4332919
Alignment:
Q  8 ataattacactgaattatgtgattttctagaattattagcagtatcggcatgt 60  Q
    ||||||||| |||||||||||||||||   |||||||| |||| |||||||||    
T  4332971 ataattacattgaattatgtgattttcccaaattattatcagtgtcggcatgt 4332919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 17776639 - 17776595
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattatta 45  Q
    |||||||||||||||||||| ||||||| ||||||  ||||||||    
T  17776639 gacacatataattacactgacttatgtggttttcttaaattatta 17776595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 18622657 - 18622613
Alignment:
Q  2 acacatataattacactgaattatgtgattttctagaattattag 46  Q
    |||| ||||||||||||||||||||||||||| |  |||||||||    
T  18622657 acacgtataattacactgaattatgtgattttattaaattattag 18622613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 67
Target Start/End: Complemental strand, 23921299 - 23921239
Alignment:
Q  7 tataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    ||||||||||||||||||||| |||||||  |||||||| | |||||| | ||||| ||||    
T  23921299 tataattacactgaattatgtaattttctcaaattattaacggtatcgacctgtcaatgtc 23921239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 30471090 - 30471038
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatc 53  Q
    ||||||||||||||||  |||||||||||||||||  || |||||| ||||||    
T  30471090 gacacatataattacatcgaattatgtgattttctcaaaatattaggagtatc 30471038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 3e-17; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 15641042 - 15641107
Alignment:
Q  6 atataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||| ||||||||||| ||||||||||||  ||||||||||||| ||||||||||||||||||||    
T  15641042 atatagttacactgaatcatgtgattttcttaaattattagcagtgtcggcatgtcagtgtccgtg 15641107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 12443469 - 12443544
Alignment:
Q  3 cacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtgcttcata 78  Q
    |||||| ||||||||||||||||||||||||||  |||||||||| || ||||| |||| || |||||||||||||    
T  12443469 cacatacaattacactgaattatgtgattttctcaaattattagctgtgtcggcgtgtccgtatccgtgcttcata 12443544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 398772 - 398842
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||| ||||||||||||||||||||||||||| |  |||||||||| || ||||| ||||||||||||||    
T  398772 gacacctataattacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgtg 398842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 2 - 72
Target Start/End: Complemental strand, 6427401 - 6427331
Alignment:
Q  2 acacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtgc 72  Q
    ||||||||||||||| ||||||||||||||||||  |||||||||| || | ||| |||||||||||||||    
T  6427401 acacatataattacattgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccgtgc 6427331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 9709872 - 9709802
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||||||||||  |||||||||||||||||  |||||||||| || | ||||||||||||||||||    
T  9709872 gacacatataattacaacgaattatgtgattttctcaaattattagcggtgtaggcatgtcagtgtccgtg 9709802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 36878513 - 36878447
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    ||||| |||||||||||||||||||||||||||||  |||||||||| || ||||| ||||||||||    
T  36878513 gacacctataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtc 36878447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 19562629 - 19562698
Alignment:
Q  2 acacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    |||||||||||||||||||| |||| ||||||||  ||||||||||||| ||||| ||||||||| ||||    
T  19562629 acacatataattacactgaactatgagattttctcaaattattagcagtgtcggcgtgtcagtgttcgtg 19562698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 40181920 - 40181848
Alignment:
Q  4 acatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtgcttcata 78  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||| || |  |||| || |||||||||||||    
T  40181920 acatataattacactgaattatgtgattttctcaaattattagcagtgtctg--tgtccgtatccgtgcttcata 40181848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 71
Target Start/End: Original strand, 2896140 - 2896198
Alignment:
Q  13 tacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    |||||||||||||||||||||||  |||||||||| || ||||| ||||||||||||||    
T  2896140 tacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtg 2896198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 13436509 - 13436455
Alignment:
Q  2 acacatataattacactgaattatgtgattttctagaattattagcagtatcggc 56  Q
    ||||||||||||||||||||||||||||||| ||  ||||||||||||| |||||    
T  13436509 acacatataattacactgaattatgtgatttccttaaattattagcagtgtcggc 13436455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 17831538 - 17831604
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    ||||||||| |||||||||||| ||||||||||||  |||||||||| || ||||| ||||||||||    
T  17831538 gacacatatgattacactgaataatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtc 17831604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 52903301 - 52903231
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||||||||||||||||||| ||||||| |  |||||||| | |||||||| ||| ||||||||||    
T  52903301 gacacatataattacactgaattatatgattttattaaattattaacggtatcggcgtgttagtgtccgtg 52903231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 7918218 - 7918263
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattag 46  Q
    |||||||||||||||||||||||||||||||||||  |||||||||    
T  7918218 gacacatataattacactgaattatgtgattttctcaaattattag 7918263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 1864887 - 1864931
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattatta 45  Q
    |||||||||||||||||||||||||||||||||||  ||||||||    
T  1864887 gacacatataattacactgaattatgtgattttctcaaattatta 1864931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 27471574 - 27471638
Alignment:
Q  2 acacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgt 66  Q
    |||||| |||||||||||||||||||| ||||||  |||||||||| |||||||  |||||||||    
T  27471574 acacatgtaattacactgaattatgtgcttttctcaaattattagcggtatcggtgtgtcagtgt 27471638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 19324612 - 19324565
Alignment:
Q  3 cacatataattacactgaattatgtgattttctagaattattagcagt 50  Q
    |||||||||||||||||||||||||||||||||  |||||| ||||||    
T  19324612 cacatataattacactgaattatgtgattttctcaaattatcagcagt 19324565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 22515902 - 22515973
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtgcttcatagg 80  Q
    |||||||||| |||||||||||||| |  |||||||||| || || || |||| ||||||||||||||||||    
T  22515902 taattacactaaattatgtgattttttcaaattattagctgtgtctgcgtgtccgtgtccgtgcttcatagg 22515973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 61
Target Start/End: Original strand, 25098563 - 25098622
Alignment:
Q  2 acacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtc 61  Q
    ||||||||||||||||||||||||||||||||||  |||||| ||| || ||||| ||||    
T  25098563 acacatataattacactgaattatgtgattttctcaaattatcagcggtgtcggcttgtc 25098622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 67
Target Start/End: Original strand, 25452162 - 25452221
Alignment:
Q  8 ataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    ||||||||||||||||||| ||||||||  ||||||||||||| | |||||||| |||||    
T  25452162 ataattacactgaattatgagattttctcaaattattagcagtgttggcatgtcggtgtc 25452221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 30749892 - 30749857
Alignment:
Q  1 gacacatataattacactgaattatgtgattttcta 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  30749892 gacacatataattacactgaattatgtgattttcta 30749857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 30771343 - 30771308
Alignment:
Q  1 gacacatataattacactgaattatgtgattttcta 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  30771343 gacacatataattacactgaattatgtgattttcta 30771308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 39953153 - 39953208
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggc 56  Q
    |||||||| ||||||||| ||||||||||||||||| |||||||||| || |||||    
T  39953153 gacacatacaattacactaaattatgtgattttctaaaattattagcggtgtcggc 39953208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 1486716 - 1486786
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||| ||||||||||||||||||||||||||| |  |||||||||| || || || ||||||| ||||||    
T  1486716 gacacttataattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtatccgtg 1486786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 5376515 - 5376577
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||||||||||||| |||||||  |||||||||| || ||||| ||| ||||||||||    
T  5376515 taattacactgaattatgttattttcttaaattattagcggtgtcggcgtgttagtgtccgtg 5376577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 10233305 - 10233271
Alignment:
Q  1 gacacatataattacactgaattatgtgattttct 35  Q
    |||||||||||||||||||||||||||||||||||    
T  10233305 gacacatataattacactgaattatgtgattttct 10233271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 10577742 - 10577812
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||||||||||||| ||| |||||||||||| ||  |||||| || ||||| |||| |||||||||    
T  10577742 gacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtcggtgtccgtg 10577812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 13997935 - 13997869
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    ||||||||||||||||||||||||||||||||| |  ||| |||| | || ||||| ||||||||||    
T  13997935 gacacatataattacactgaattatgtgatttttttaaataattaacggtgtcggcgtgtcagtgtc 13997869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 25361938 - 25361904
Alignment:
Q  1 gacacatataattacactgaattatgtgattttct 35  Q
    |||||||||||||||||||||||||||||||||||    
T  25361938 gacacatataattacactgaattatgtgattttct 25361904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 34371765 - 34371731
Alignment:
Q  1 gacacatataattacactgaattatgtgattttct 35  Q
    |||||||||||||||||||||||||||||||||||    
T  34371765 gacacatataattacactgaattatgtgattttct 34371731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 38503372 - 38503302
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||||||||||||||| ||| |||||||||  |||||||||| || ||||  ||| ||||||||||    
T  38503372 gacacatataattacactgaaatatatgattttctcaaattattagcggtgtcggtgtgttagtgtccgtg 38503302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 44482282 - 44482248
Alignment:
Q  1 gacacatataattacactgaattatgtgattttct 35  Q
    |||||||||||||||||||||||||||||||||||    
T  44482282 gacacatataattacactgaattatgtgattttct 44482248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 10572596 - 10572661
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgt 66  Q
    ||||||| ||||||||| |||||||||||||||||  |||||||||  || ||||| |||||||||    
T  10572596 gacacatttaattacaccgaattatgtgattttctcaaattattagtggtgtcggcgtgtcagtgt 10572661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 17705593 - 17705626
Alignment:
Q  1 gacacatataattacactgaattatgtgattttc 34  Q
    ||||||||||||||||||||||||||||||||||    
T  17705593 gacacatataattacactgaattatgtgattttc 17705626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 34712390 - 34712439
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagt 50  Q
    |||||||||||||||||| |||||||| |||||||  |||||||||||||    
T  34712390 gacacatataattacactaaattatgttattttctcaaattattagcagt 34712439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 34298482 - 34298418
Alignment:
Q  7 tataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    |||||||||||||||||||||||||||||  |||||||||  || ||||  ||||||| ||||||    
T  34298482 tataattacactgaattatgtgattttctcaaattattagtggtgtcggtgtgtcagtttccgtg 34298418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 15323215 - 15323148
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtcc 68  Q
    ||||| || ||||||||| |||||||||||||| |  |||||||| | |||||| |||||||||||||    
T  15323215 gacacttacaattacactaaattatgtgattttttcaaattattaactgtatcgacatgtcagtgtcc 15323148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 113343 - 113289
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcag 63  Q
    ||||||||||||||||||||||||| |  |||||||||| || ||||| ||||||    
T  113343 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcag 113289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 3490405 - 3490463
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    |||||||||||||| ||||  ||||||  ||||||||||||| ||||| ||||||||||    
T  3490405 taattacactgaataatgtagttttctcaaattattagcagtgtcggcgtgtcagtgtc 3490463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 5898277 - 5898339
Alignment:
Q  5 catataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    ||||||||||||||||||||||||||||| |   ||||||||| || ||||| | ||||||||    
T  5898277 catataattacactgaattatgtgattttttcagattattagcggtgtcggcgtctcagtgtc 5898339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 6415008 - 6415078
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||| |||||| |||| |||||||||||||||  ||| ||||||  | ||||| ||||||||||||||    
T  6415008 gacacatctaattaaactgtattatgtgattttctcaaataattagcgatgtcggcgtgtcagtgtccgtg 6415078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 6612186 - 6612248
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||||||||||||| ||||| |  |||||||| | |||||||| ||||| ||||||||    
T  6612186 taattacactgaattatgtaattttttcaaattattaactgtatcggcgtgtcattgtccgtg 6612248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 12713337 - 12713379
Alignment:
Q  4 acatataattacactgaattatgtgattttctagaattattag 46  Q
    ||||||||||||||| ||||||||||||||||  |||||||||    
T  12713337 acatataattacactaaattatgtgattttcttaaattattag 12713379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 12717428 - 12717470
Alignment:
Q  4 acatataattacactgaattatgtgattttctagaattattag 46  Q
    ||||||||||||||| ||||||||||||||||  |||||||||    
T  12717428 acatataattacactaaattatgtgattttcttaaattattag 12717470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 14332652 - 14332694
Alignment:
Q  4 acatataattacactgaattatgtgattttctagaattattag 46  Q
    ||||||||||||||| ||||||||||||||||  |||||||||    
T  14332652 acatataattacactaaattatgtgattttctcaaattattag 14332694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 20157357 - 20157391
Alignment:
Q  1 gacacatataattacactgaattatgtgattttct 35  Q
    ||||||||| |||||||||||||||||||||||||    
T  20157357 gacacatatgattacactgaattatgtgattttct 20157391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 23636056 - 23636126
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    |||||||| |||||||||||||||||| |||||||  |||| || || || ||||| ||||| ||||||||    
T  23636056 gacacatacaattacactgaattatgtaattttctcaaatttttggcggtttcggcgtgtcaatgtccgtg 23636126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 25934668 - 25934630
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaa 39  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  25934668 gacacatataattacactgtattttgtgattttctagaa 25934630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 30847727 - 30847797
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||| |||||| |||||||||| ||||| |  ||||||||||||| || ||||||| ||| |||||    
T  30847727 gacacatatgattacattgaattatgtcattttttcaaattattagcagtgtcagcatgtcggtgcccgtg 30847797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 47
Target Start/End: Complemental strand, 31015087 - 31015049
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagc 47  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  31015087 taattacactgaattatgtgattttctcaaattattagc 31015049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 36906048 - 36905982
Alignment:
Q  2 acacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtcc 68  Q
    |||||||||||||| |||||||||||||||||||   ||||||||| || | ||  |||||||||||    
T  36906048 acacatataattactctgaattatgtgattttctcagattattagcggtgttggtgtgtcagtgtcc 36905982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 38075977 - 38076043
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    ||||||||| |||||||||| ||||||||||| ||  ||||||||||||| ||| | |||| |||||    
T  38075977 gacacatatgattacactgacttatgtgatttactcaaattattagcagtgtcgtcgtgtccgtgtc 38076043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 46348398 - 46348460
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    |||||||||| |||||| ||||||| |  |||||||||| || ||||| ||||||||||||||    
T  46348398 taattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 46348460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 1815301 - 1815240
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgt 70  Q
    ||||||||||||||||||||||||| || ||| ||||   || ||||| |||||||||||||    
T  1815301 taattacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 1815240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 7353500 - 7353581
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtgcttcataggtt 82  Q
    |||| ||||||||||||| |||||||| ||||| | |||||| ||||||  ||||  |||| |||| ||||||||| |||||    
T  7353500 gacatatataattacactaaattatgtaattttttcgaattaatagcagcgtcggtgtgtcggtgtacgtgcttcaaaggtt 7353581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 9828096 - 9828051
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattag 46  Q
    |||||||| |||||||||||||||||||||||| |  |||||||||    
T  9828096 gacacataaaattacactgaattatgtgattttatcaaattattag 9828051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 37055871 - 37055916
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcg 54  Q
    |||||||||| |||||||| |||||||  |||||||||||||||||    
T  37055871 taattacactaaattatgtaattttctcaaattattagcagtatcg 37055916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 5944335 - 5944303
Alignment:
Q  1 gacacatataattacactgaattatgtgatttt 33  Q
    ||||| |||||||||||||||||||||||||||    
T  5944335 gacacttataattacactgaattatgtgatttt 5944303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 26238120 - 26238196
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtgcttcatagg 80  Q
    |||||||||| |||||||||||||||| |||||||  |||||||||| || ||||  | || |||||| |||||||||||    
T  26238120 gacacatata-ttacactgaattatgttattttctcaaattattagcggtgtcgg--tatctgtgtccttgcttcatagg 26238196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 35919283 - 35919315
Alignment:
Q  1 gacacatataattacactgaattatgtgatttt 33  Q
    ||||| |||||||||||||||||||||||||||    
T  35919283 gacacttataattacactgaattatgtgatttt 35919315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 37598883 - 37598816
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccg 69  Q
    ||||| ||||||||||||||||| ||||||||| |  |||||||||  || ||||| ||||||||||||    
T  37598883 gacacttataattacactgaatt-tgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccg 37598816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 39130774 - 39130818
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattatta 45  Q
    |||||||||||||||||| |||||| | |||||||| ||||||||    
T  39130774 gacacatataattacactaaattatataattttctaaaattatta 39130818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 263379 - 263449
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||| |||||||||||||||||||||| ||||||  ||||||||||||| | | ||||||||||||||||    
T  263379 gacacttataattacactgaattatgtggttttctcaaattattagcagtgttgacatgtcagtgtccgtg 263449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 13844603 - 13844669
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    |||||||||||||||||| ||||||||||||||||  ||||||||||||| ||||| |||| |||||    
T  13844603 gacacatataattacactcaattatgtgattttctcaaattattagcagtgtcggcgtgtccgtgtc 13844669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 27213599 - 27213529
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||||||| ||||| |||| || ||||||    
T  27213599 gacacatataattacagtgaattatgtgattttctgaaattattagcagtgtcggcgtgtctgtatccgtg 27213529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 34897137 - 34897068
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgt 70  Q
    |||||||||||||||||||||||||||||||||||  |||||||||| || ||| | |||| ||||||||    
T  34897137 gacacatataattacactgaattatgtgattttctcaaattattagcggtgtcgacgtgtctgtgtccgt 34897068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 31236584 - 31236644
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtc 61  Q
    |||||||||||||||| ||||||||||||||||||  ||||||||||||| ||||| ||||    
T  31236584 gacacatataattacattgaattatgtgattttctcaaattattagcagtgtcggcgtgtc 31236644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 4786345 - 4786411
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    |||||||||||||||||||||||||||||||||||  ||||||||   || ||||| ||||||||||    
T  4786345 gacacatataattacactgaattatgtgattttcttaaattattaatggtgtcggcgtgtcagtgtc 4786411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 18407763 - 18407705
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    ||||||||||||||||||||||||| | ||||||||||| || |||||||||| |||||    
T  18407763 taattacactgaattatgtgatttttttgaattattagctgtgtcggcatgtctgtgtc 18407705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 24362209 - 24362275
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    ||||||||||||||||||||||||||||||| |||  |||||||||| || ||||| |||| |||||    
T  24362209 gacacatataattacactgaattatgtgattctctcaaattattagcggtgtcggcgtgtcggtgtc 24362275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 36934721 - 36934652
Alignment:
Q  2 acacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||||||||| |||||||||||||||| | ||||||||||| || ||| | ||| ||||||||||    
T  36934721 acacatataattacaatgaattatgtgattttttcgaattattagcggtgtcgacgtgttagtgtccgtg 36934652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 11803310 - 11803262
Alignment:
Q  2 acacatataattacactgaattatgtgattttctagaattattagcagt 50  Q
    ||||||||||||||||||||||||||||||||||  |||||||| ||||    
T  11803310 acacatataattacactgaattatgtgattttcttaaattattaacagt 11803262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 14731763 - 14731715
Alignment:
Q  2 acacatataattacactgaattatgtgattttctagaattattagcagt 50  Q
    ||||||||||||||||| ||||||||||||||||  |||||||||||||    
T  14731763 acacatataattacactaaattatgtgattttctcaaattattagcagt 14731715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 39954288 - 39954352
Alignment:
Q  3 cacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    |||||||||||||||| ||||||||||||||||  |||||||||| || ||||| |||| |||||    
T  39954288 cacatataattacactaaattatgtgattttctcaaattattagcggtgtcggcgtgtcggtgtc 39954352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 3025603 - 3025556
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagca 48  Q
    ||||| |||||||||||||||||||||||||||||  |||||||||||    
T  3025603 gacacctataattacactgaattatgtgattttctcaaattattagca 3025556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 11927093 - 11927148
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggc 56  Q
    ||||||||||||||||||||||||||||||||| |  |||||||| |||| |||||    
T  11927093 gacacatataattacactgaattatgtgattttatcaaattattaacagtgtcggc 11927148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 26902182 - 26902217
Alignment:
Q  1 gacacatataattacactgaattatgtgattttcta 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  26902182 gacacatataattacactgaattatgtgattttcta 26902217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 29776085 - 29776018
Alignment:
Q  4 acatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||||| ||||||||| ||||||||||  ||||||||||||| ||| | ||||| ||||||||    
T  29776085 acatataattatactgaattacgtgattttctcaaattattagcagtgtcgacttgtcaatgtccgtg 29776018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 8 - 71
Target Start/End: Original strand, 37283824 - 37283887
Alignment:
Q  8 ataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||||||||||||||||||||||   ||||||||| ||  | |||||||||||||||||    
T  37283824 ataattacactgaattatgtgattttctcagattattagcggtgcccgcatgtcagtgtccgtg 37283887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 20679402 - 20679468
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    ||||| ||||||||||||||| |||||||||||||  |||||||||  || ||| ||||||||||||    
T  20679402 gacacttataattacactgaactatgtgattttctcaaattattaggggtgtcgacatgtcagtgtc 20679468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 12570515 - 12570564
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagt 50  Q
    |||||||||||||||||| ||||||||| ||||||  |||||||||||||    
T  12570515 gacacatataattacacttaattatgtgtttttcttaaattattagcagt 12570564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 12606836 - 12606885
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagt 50  Q
    |||||||||||||||| |||||||| |||||||||  |||||||||||||    
T  12606836 gacacatataattacattgaattatatgattttctcaaattattagcagt 12606885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 14134751 - 14134706
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattag 46  Q
    |||| ||||||||||||||||||||||||||||||  |||||||||    
T  14134751 gacatatataattacactgaattatgtgattttctcaaattattag 14134706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 15816136 - 15816205
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgt 70  Q
    ||||| |||||||||||| |||||||||||||| |  |||||||||  || ||||| |||||||||||||    
T  15816136 gacacttataattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgt 15816205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 4611583 - 4611540
Alignment:
Q  4 acatataattacactgaattatgtgattttctagaattattagc 47  Q
    |||||||||||||||||||||||| |||||||  ||||||||||    
T  4611583 acatataattacactgaattatgttattttctcaaattattagc 4611540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 8847308 - 8847277
Alignment:
Q  1 gacacatataattacactgaattatgtgattt 32  Q
    ||||||||||||||||||||||||||||||||    
T  8847308 gacacatataattacactgaattatgtgattt 8847277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 11944717 - 11944662
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggc 56  Q
    |||||||||||||||||||| |||||||||||| |  |||||||| |||| |||||    
T  11944717 gacacatataattacactgagttatgtgattttatcaaattattaacagtgtcggc 11944662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 18964229 - 18964194
Alignment:
Q  1 gacacatataattacactgaattatgtgattttcta 36  Q
    |||||||||||||||| |||||||||||||||||||    
T  18964229 gacacatataattacattgaattatgtgattttcta 18964194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 926795 - 926865
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||| |||||||||||||||  ||| ||||||||  ||||||||| ||| | ||| ||||||||||||||    
T  926795 gacacttataattacactgaacaatgagattttctcaaattattaggagtgttggcgtgtcagtgtccgtg 926865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 22652020 - 22651958
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    |||||| | |||||||||||||||| |  |||||||||| || ||||| ||||||||||||||    
T  22652020 taattatattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 22651958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 28385001 - 28385071
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    |||||||||||||||||||||||||| |||||  |   ||||||| | || |||| |||||||||||||||    
T  28385001 gacacatataattacactgaattatgagatttattcatattattaacggtgtcggtatgtcagtgtccgtg 28385071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 29510319 - 29510381
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    |||||| |||||||| ||||||||| |  |||||||||| || ||||| ||||||||||||||    
T  29510319 taattatactgaattttgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 29510381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 31109525 - 31109595
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    |||||||||| ||| |||||||| | |||||||||  |||||||| | || ||||| ||||||||||||||    
T  31109525 gacacatatagttagactgaattgtttgattttctcaaattattaacggtgtcggcgtgtcagtgtccgtg 31109595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 34222999 - 34222953
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagc 47  Q
    |||||||||||||||||| |||||||||||||| |  ||||||||||    
T  34222999 gacacatataattacacttaattatgtgattttattaaattattagc 34222953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 36450769 - 36450831
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||||||||| ||||||||| |  |||||||||  || ||||| ||||||||||||||    
T  36450769 taattacactgaattctgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtg 36450831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 44067568 - 44067502
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    ||||| ||||||||||||| ||||||| |||||||  |||||||| | || ||||| ||||||||||    
T  44067568 gacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtc 44067502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 6065672 - 6065733
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgt 70  Q
    |||||| |||| ||||||||||||| ||||||||||| | |||||||  || ||||||||||    
T  6065672 taattatactgtattatgtgattttttagaattattaactgtatcggtgtgccagtgtccgt 6065733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 7442889 - 7442828
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgt 70  Q
    ||||||||||||||||||| ||||| |  |||||||||| || | ||||||| |||||||||    
T  7442889 taattacactgaattatgtaattttatgaaattattagcggtgttggcatgttagtgtccgt 7442828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 7658515 - 7658470
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattag 46  Q
    |||| |||||||||||||||||||||| |||||||  |||||||||    
T  7658515 gacaaatataattacactgaattatgtaattttctcaaattattag 7658470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 22596038 - 22595981
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgt 66  Q
    ||||||||||||||||||| ||||| |  |||||||||| || ||||| |||||||||    
T  22596038 taattacactgaattatgttatttttttaaattattagctgtgtcggcgtgtcagtgt 22595981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 25192354 - 25192423
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgt 70  Q
    ||||| |||||||| |||||||||||| | ||| |  |||||||||| || ||||| |||||||||||||    
T  25192354 gacacttataattatactgaattatgtcactttttcaaattattagctgtgtcggcgtgtcagtgtccgt 25192423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 40332235 - 40332194
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagt 50  Q
    |||||||||||||||||||||||||||  ||||||| |||||    
T  40332235 taattacactgaattatgtgattttctcaaattatttgcagt 40332194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 13203688 - 13203648
Alignment:
Q  6 atataattacactgaattatgtgattttctagaattattag 46  Q
    |||||||||||||||||||||| |||||||  |||||||||    
T  13203688 atataattacactgaattatgtaattttctcaaattattag 13203648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 30271306 - 30271366
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccg 69  Q
    ||||||||||| ||||||||||||| |  ||| |||||| || ||||| ||||||||||||    
T  30271306 taattacactgcattatgtgattttttcaaatgattagctgtgtcggcgtgtcagtgtccg 30271366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 31580134 - 31580178
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattatta 45  Q
    ||||| |||||||||||| ||||||||||||||||  ||||||||    
T  31580134 gacacctataattacactcaattatgtgattttcttaaattatta 31580178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 33382026 - 33382070
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattatta 45  Q
    ||||||||||||||| ||||||||||| |||||||  ||||||||    
T  33382026 gacacatataattactctgaattatgtcattttcttaaattatta 33382070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 33405391 - 33405435
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattatta 45  Q
    |||||||||||||||||| ||||||||| ||||||  ||||||||    
T  33405391 gacacatataattacactaaattatgtgtttttctcaaattatta 33405435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 2 - 69
Target Start/End: Complemental strand, 36635375 - 36635308
Alignment:
Q  2 acacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccg 69  Q
    ||||||||||||||||||||||||||||||||||  |||||||||  || | ||| ||||||||||||    
T  36635375 acacatataattacactgaattatgtgattttctcaaattattagtggtgttggcgtgtcagtgtccg 36635308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 15029816 - 15029751
Alignment:
Q  2 acacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    ||||||||||||||||||||||||||||| || |  ||||||||||||| || || ||||||||||    
T  15029816 acacatataattacactgaattatgtgatattttcaaattattagcagtgtctgcgtgtcagtgtc 15029751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 40613502 - 40613441
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtca 62  Q
    |||||||||||||||||||||||||||||||||||  || ||||||| || ||||| |||||    
T  40613502 gacacatataattacactgaattatgtgattttctcaaaatattagcggtgtcggcgtgtca 40613441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 18576045 - 18576097
Alignment:
Q  2 acacatataattacactgaattatgtgattttctagaattattagcagtatcg 54  Q
    |||||||||||||||| |||||||||||||||||  |||||| ||||||||||    
T  18576045 acacatataattacaccgaattatgtgattttctcaaattatcagcagtatcg 18576097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 35161082 - 35161034
Alignment:
Q  7 tataattacactgaattatgtgattttctagaattattagcagtatcgg 55  Q
    ||||||||||||||||||||||||||||| |||||| ||||||| ||||    
T  35161082 tataattacactgaattatgtgattttcttgaattagtagcagtgtcgg 35161034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 13134502 - 13134447
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggc 56  Q
    |||||||||||||||||| ||||||||||||||||  |||||| |||||| |||||    
T  13134502 gacacatataattacactaaattatgtgattttcttaaattataagcagtgtcggc 13134447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 35723391 - 35723458
Alignment:
Q  1 gacacatataattacactgaattatgtg-attttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    |||||||||||||||| ||||||||||| |||||||  |||||||||| || ||||| ||||||||||    
T  35723391 gacacatataattacattgaattatgtgtattttctcaaattattagcggtgtcggcgtgtcagtgtc 35723458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 903971 - 903905
Alignment:
Q  4 acatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgt 70  Q
    ||||||||||||||||||||||||||||||||  |||||||| | ||  |||  |||||||||||||    
T  903971 acatataattacactgaattatgtgattttctcaaattattaacggtgccggtgtgtcagtgtccgt 903905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 21945547 - 21945489
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    ||||||||||||||||||| ||||| |  |||||||||| || ||||||||||||||||    
T  21945547 taattacactgaattatgtcattttttcaaattattagctgtgtcggcatgtcagtgtc 21945489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 22440609 - 22440651
Alignment:
Q  3 cacatataattacactgaattatgtgattttctagaattatta 45  Q
    |||||||||||||||||||||||||||||||||  ||||||||    
T  22440609 cacatataattacactgaattatgtgattttctcaaattatta 22440651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 26504306 - 26504376
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||||||||||||||| ||| |||||||||  ||||||||||||| |||   | ||||||||||||    
T  26504306 gacacatataattacactgaactatttgattttcttaaattattagcagtgtcgatgtttcagtgtccgtg 26504376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 32910596 - 32910526
Alignment:
Q  8 ataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtgcttcata 78  Q
    |||||||||||||||||||| |||||||  |||||||| | || |||| ||||| |||| |||||||||||    
T  32910596 ataattacactgaattatgtcattttctcaaattattatccgtgtcggtatgtcggtgttcgtgcttcata 32910526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 5775365 - 5775409
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattatta 45  Q
    |||||||||||||||||| ||||||||||||||||  ||||||||    
T  5775365 gacacatataattacacttaattatgtgattttctcaaattatta 5775409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 8423731 - 8423771
Alignment:
Q  7 tataattacactgaattatgtgattttctagaattattagc 47  Q
    |||||||||||||||||||||||||||||  ||||||||||    
T  8423731 tataattacactgaattatgtgattttctcaaattattagc 8423771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 13783331 - 13783263
Alignment:
Q  3 cacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||||||||||||||| |||||| ||||  ||| |||||| || ||||  ||||||||||||||    
T  13783331 cacatataattacactgaattttgtgatcttctcaaataattagcggtgtcggtgtgtcagtgtccgtg 13783263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 15659768 - 15659816
Alignment:
Q  2 acacatataattacactgaattatgtgattttctagaattattagcagt 50  Q
    |||||||||||||||| |||||||| ||||||||  |||||||||||||    
T  15659768 acacatataattacaccgaattatgagattttctcaaattattagcagt 15659816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 5414182 - 5414249
Alignment:
Q  4 acatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    |||||||||||||||| ||| |||||||||||| ||  |||||| || ||||| |||| |||||||||    
T  5414182 acatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtccgtgtccgtg 5414249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 16189761 - 16189682
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcgg-catgtcagtgtccgtgcttcatag 79  Q
    |||||| ||||||||||||||||||||||||||||  |||| ||||| || | || | |||| || ||||||||||||||    
T  16189761 gacacacataattacactgaattatgtgattttctcaaatttttagcggtgttggccgtgtccgtatccgtgcttcatag 16189682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 40774333 - 40774286
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagca 48  Q
    |||||||||||||||| |||||||| ||||||| || |||||||||||    
T  40774333 gacacatataattacattgaattatctgattttataaaattattagca 40774286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 3947781 - 3947839
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    |||||||||||||||||| |||||| |  |||||||||| || |||||||||| |||||    
T  3947781 taattacactgaattatgcgattttttcaaattattagctgtgtcggcatgtccgtgtc 3947839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 10499277 - 10499311
Alignment:
Q  1 gacacatataattacactgaattatgtgattttct 35  Q
    |||||||||||||||||| ||||||||||||||||    
T  10499277 gacacatataattacactaaattatgtgattttct 10499311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 14126118 - 14126184
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    ||||| ||||||||||||||||||||||| ||| |  |||||||| |||| ||||| ||| ||||||    
T  14126118 gacacttataattacactgaattatgtgactttatcaaattattaacagtgtcggcgtgttagtgtc 14126184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 23293001 - 23293063
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    |||||| |||||||||||||||||| |  |||||||||| || ||||| ||||| ||||||||    
T  23293001 taattatactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtg 23293063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 24343559 - 24343489
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||| ||||||||||||||||||||| |||||||  |||||||| | || ||||| |||| | |||||||    
T  24343559 gacacctataattacactgaattatgtaattttctcaaattattatccgtgtcggcgtgtcggcgtccgtg 24343489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 40481680 - 40481623
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    ||||||||||||||||||||||||| |  |||||||||  |||||||| ||||||||||    
T  40481680 taattacactgaattatgtgatttt-tcaaattattagttgtatcggcgtgtcagtgtc 40481623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 56257978 - 56257936
Alignment:
Q  8 ataattacactgaattatgtgattttctagaattattagcagt 50  Q
    |||||||||||||||||| |||||||||  |||||||||||||    
T  56257978 ataattacactgaattatatgattttctcaaattattagcagt 56257936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 4383411 - 4383351
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgt 70  Q
    ||||||||||||||||||||||||| |  |||||||||  |||||| | |||||||||||||    
T  4383411 taattacactgaattatgtgatttt-tcaaattattagttgtatcgacgtgtcagtgtccgt 4383351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 20521873 - 20521926
Alignment:
Q  18 tgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    |||||||||||||||| |  |||||||| | |||||||| ||||||||||||||    
T  20521873 tgaattatgtgattttatcaaattattatcggtatcggcgtgtcagtgtccgtg 20521926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 21539879 - 21539940
Alignment:
Q  6 atataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    ||||||||||||| |||||| |||||||||  ||||||||   || ||||||||||||||||    
T  21539879 atataattacactaaattatatgattttcttaaattattaatggtgtcggcatgtcagtgtc 21539940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 30838256 - 30838191
Alignment:
Q  7 tataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtgc 72  Q
    |||||||||||| |||||| | ||||| |  ||||||||||||||||| | | |||||||||||||    
T  30838256 tataattacactaaattatataattttatcaaattattagcagtatcgacgtatcagtgtccgtgc 30838191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 54580030 - 54580075
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattag 46  Q
    ||||| ||||||||||||||||||||||||||| |  |||||||||    
T  54580030 gacacttataattacactgaattatgtgattttttcaaattattag 54580075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 7970568 - 7970507
Alignment:
Q  4 acatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    |||||||||||||||||||||| |||||||||   |||||| || || || |||||||||||||    
T  7970568 acatataattacactgaattatatgattttct--cattattggcggtgtcagcatgtcagtgtc 7970507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 9996889 - 9996849
Alignment:
Q  4 acatataattacactgaattatgtgattttctagaattatt 44  Q
    ||||||||||| ||||||||||||||||||||  |||||||    
T  9996889 acatataattatactgaattatgtgattttctcaaattatt 9996849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 16184862 - 16184801
Alignment:
Q  8 ataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    |||||| ||||||||| |||||||||||  |||||||||| |  ||||| ||||||||||||||    
T  16184862 ataatttcactgaattgtgtgattttctcaaattattagcgg--tcggcgtgtcagtgtccgtg 16184801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 20743286 - 20743350
Alignment:
Q  2 acacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgt 66  Q
    |||| ||| ||||||||||||||||| |||||||  |||||||| | || ||||| |||||||||    
T  20743286 acacctatgattacactgaattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgt 20743350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 22234897 - 22234929
Alignment:
Q  1 gacacatataattacactgaattatgtgatttt 33  Q
    |||||||| ||||||||||||||||||||||||    
T  22234897 gacacatagaattacactgaattatgtgatttt 22234929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 33
Target Start/End: Original strand, 40179647 - 40179675
Alignment:
Q  5 catataattacactgaattatgtgatttt 33  Q
    |||||||||||||||||||||||||||||    
T  40179647 catataattacactgaattatgtgatttt 40179675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 52
Target Start/End: Original strand, 49652982 - 49653030
Alignment:
Q  4 acatataattacactgaattatgtgattttctagaattattagcagtat 52  Q
    ||||||||||| |||||||||| |||||||||  ||||||||| |||||    
T  49652982 acatataattatactgaattatctgattttcttaaattattagtagtat 49653030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 51855 - 51793
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||||||||||||||||||| |  |||||||||| || ||||| ||||||||||||||    
T  51855 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtg 51793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 53232 - 53170
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcag 63  Q
    ||||| |||||||||||||||||||||||||||||  ||||||| || |||||||| ||||||    
T  53232 gacacttataattacactgaattatgtgattttctcaaattattggcggtatcggcgtgtcag 53170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 135319 - 135373
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcgg 55  Q
    ||||||||||||||||| |||||||||||||||||  ||||||||||||| ||||    
T  135319 gacacatataattacacagaattatgtgattttctcaaattattagcagtgtcgg 135373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 92851 - 92790
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgt 70  Q
    ||||||||||||||||||| |||||||  |||||||||| || ||||| |||||||||||||    
T  92851 taattacactgaattatgtaattttctcaaattattagcggtgtcggcgtgtcagtgtccgt 92790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 477 - 539
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||||||||| ||||||||| |  ||||||||||||| ||||| | ||||||||||||    
T  477 taattacactgaattttgtgattttttcaaattattagcagtgtcggcgtatcagtgtccgtg 539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 13444 - 13382
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||| |||||||||||||||||||||  |||||||||  || ||||| ||||||||||||||    
T  13444 taattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtg 13382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 20216 - 20154
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||||||||||||||||||| |  |||||||||| || ||||| ||||| ||||||||    
T  20216 taattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtg 20154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 23472 - 23406
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    ||||| ||||||||||||||||||||||||||| | || |||||| | || ||||| ||||||||||    
T  23472 gacacttataattacactgaattatgtgatttttttgagttattatctgtgtcggcgtgtcagtgtc 23406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 23563 - 23531
Alignment:
Q  1 gacacatataattacactgaattatgtgatttt 33  Q
    ||||| |||||||||||||||||||||||||||    
T  23563 gacacttataattacactgaattatgtgatttt 23531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 21095 - 21025
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    |||||||||||||| || || ||||||||||||||  |||||||| | || || |||||||||||||||||    
T  21095 gacacatataattataccgacttatgtgattttctcaaattattaaccgtgtcagcatgtcagtgtccgtg 21025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 21883 - 21945
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||| |||||||||||||||||||||  |||||||||  || ||||| ||||||||||||||    
T  21883 taattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtg 21945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 44532 - 44566
Alignment:
Q  1 gacacatataattacactgaattatgtgattttct 35  Q
    |||||||||||||||||||||||||||||||||||    
T  44532 gacacatataattacactgaattatgtgattttct 44566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 9754 - 9799
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattag 46  Q
    |||||||||||||||||||||||| ||||||||||  |||||||||    
T  9754 gacacatataattacactgaattaagtgattttctcaaattattag 9799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 67
Target Start/End: Complemental strand, 99944 - 99879
Alignment:
Q  2 acacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    ||||||||||||||| |||||||||| |||||||| |||||||| | || ||| |||||| |||||    
T  99944 acacatataattacattgaattatgttattttctaaaattattatcggtgtcgacatgtccgtgtc 99879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 90895 - 90851
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattatta 45  Q
    |||| |||||||||||||||||||| |||||||||  ||||||||    
T  90895 gacatatataattacactgaattatatgattttctcaaattatta 90851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 6003 - 6070
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtcc 68  Q
    ||||||||||||||||||| ||| |||||||||||| ||  |||||  |||||||| |||| ||||||    
T  6003 gacacatataattacactgcattttgtgattttctaaaaaaattagatgtatcggcgtgtcggtgtcc 6070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 28902 - 28831
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtgc 72  Q
    |||||||||||||||| ||||||||| ||||||||  |||||||| | || ||||| ||| ||||| |||||    
T  28902 gacacatataattacattgaattatgcgattttcttaaattattaacggtgtcggcgtgttagtgttcgtgc 28831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 241639 - 241576
Alignment:
Q  8 ataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||||| ||||||||||||||    |||||||||| || ||||| ||||||||||||||    
T  241639 ataattacactaaattatgtgatttttccaaattattagctgtgtcggcgtgtcagtgtccgtg 241576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 19619 - 19562
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    ||||||||||||||||||||||||| |  |||||||||  |||||||| ||||||||||    
T  19619 taattacactgaattatgtgatttt-tcaaattattagttgtatcggcgtgtcagtgtc 19562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 3864 - 3922
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtc 67  Q
    ||||||||||||||||||||||||| |  |||||||| | || ||||||| ||||||||    
T  3864 taattacactgaattatgtgatttttttaaattattaaccgtgtcggcatatcagtgtc 3922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 46726 - 46664
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||||||||||||||||||||||| |  |||||||| | || ||||| ||||| ||||||||    
T  46726 taattacactgaattatgtgattttttcaaattattaactgtgtcggcgtgtcattgtccgtg 46664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 225275 - 225345
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgtg 71  Q
    ||||| |||||||||| || ||||||| |||||||  |||||||| | || ||||| ||||||||||||||    
T  225275 gacacttataattacattgtattatgtcattttctcaaattattatctgtgtcggcgtgtcagtgtccgtg 225345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 192264 - 192325
Alignment:
Q  9 taattacactgaattatgtgattttctagaattattagcagtatcggcatgtcagtgtccgt 70  Q
    ||||||||| ||||||||| |||||||  |||||||| | || ||||| |||||||||||||    
T  192264 taattacaccgaattatgtaattttctcaaattattaacggtgtcggcgtgtcagtgtccgt 192325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 25775 - 25819
Alignment:
Q  1 gacacatataattacactgaattatgtgattttctagaattatta 45  Q
    ||||| |||||||||||| ||||||||||||||||  ||||||||    
T  25775 gacacttataattacactaaattatgtgattttctctaattatta 25819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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