View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10151_low_31 (Length: 313)
Name: NF10151_low_31
Description: NF10151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10151_low_31 |
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Alignment Details
Target: chr1 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 15 - 298
Target Start/End: Complemental strand, 7786336 - 7786046
Alignment:
| Q |
15 |
acctgtgctatgatctacttacagaaaaatggtagccaaatatgaccattt-------ttcaactaaagtctattacgtaaccnnnnnnnnctaaagtct |
107 |
Q |
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| T |
7786336 |
acctgtgctatgatctacttacagaaaaatggtagccaaatatgaccatttattcaaattcaactaaagtctattacgtaaccaaaaaaaactaaagtct |
7786237 |
T |
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| Q |
108 |
attacagtagaaatatctcaatatttagcttccactaaccaaagaaggtaaggaatatcgaatcaagttgtatataagtctaggtaactcccccaatata |
207 |
Q |
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| T |
7786236 |
attacagtagaaatatctcaatatttagcttccactaaccaaagaaggtaaggaatatcgaatcaagttgtatataagtctaggtaactcccccaatata |
7786137 |
T |
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| Q |
208 |
tatggaagaaaataacttttaagcatgtaggataattaaaaacggtaaagataaacatttatacatttggacaaatattttcatttatttt |
298 |
Q |
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| T |
7786136 |
tatggaagaaaataacttttaagcatgtaggataattaaaaacggtaaagataaacatttatacatttggacaaatattttcatttatttt |
7786046 |
T |
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