View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10151_low_46 (Length: 247)

Name: NF10151_low_46
Description: NF10151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10151_low_46
NF10151_low_46
[»] chr3 (11 HSPs)
chr3 (24-247)||(7032497-7032720)
chr3 (26-137)||(7312969-7313080)
chr3 (26-137)||(10323407-10323518)
chr3 (24-137)||(34332651-34332764)
chr3 (26-137)||(2364470-2364581)
chr3 (26-137)||(19920065-19920176)
chr3 (24-112)||(40930389-40930477)
chr3 (47-136)||(963000-963089)
chr3 (47-106)||(3141066-3141125)
chr3 (44-105)||(48569907-48569968)
chr3 (47-127)||(2756056-2756136)
[»] chr5 (13 HSPs)
chr5 (28-137)||(31641706-31641815)
chr5 (24-137)||(28535511-28535624)
chr5 (24-137)||(35983627-35983740)
chr5 (26-137)||(30732150-30732261)
chr5 (26-137)||(12825392-12825503)
chr5 (26-137)||(27116997-27117108)
chr5 (26-137)||(42513913-42514024)
chr5 (24-137)||(23238575-23238688)
chr5 (28-137)||(42928326-42928435)
chr5 (47-127)||(24408142-24408222)
chr5 (44-105)||(27795694-27795755)
chr5 (47-114)||(18089620-18089687)
chr5 (47-106)||(33169872-33169931)
[»] chr7 (8 HSPs)
chr7 (28-137)||(17720830-17720939)
chr7 (24-137)||(11277088-11277201)
chr7 (24-137)||(47877174-47877287)
chr7 (26-137)||(4937964-4938075)
chr7 (24-137)||(235273-235386)
chr7 (24-137)||(29968165-29968278)
chr7 (39-133)||(37919750-37919844)
chr7 (76-114)||(27854301-27854339)
[»] chr8 (9 HSPs)
chr8 (28-137)||(9922796-9922905)
chr8 (24-137)||(13396579-13396692)
chr8 (26-137)||(7924579-7924690)
chr8 (26-137)||(8299996-8300107)
chr8 (24-137)||(32266753-32266866)
chr8 (24-133)||(41665209-41665318)
chr8 (26-137)||(172296-172407)
chr8 (44-105)||(13879355-13879416)
chr8 (44-93)||(25090598-25090647)
[»] chr6 (7 HSPs)
chr6 (24-137)||(21168390-21168503)
chr6 (24-135)||(2553828-2553939)
chr6 (58-137)||(24767265-24767344)
chr6 (47-127)||(13937914-13937994)
chr6 (56-106)||(18682401-18682451)
chr6 (76-117)||(33185678-33185719)
chr6 (44-90)||(14372874-14372920)
[»] chr1 (6 HSPs)
chr1 (26-137)||(11908941-11909052)
chr1 (26-137)||(6050796-6050907)
chr1 (26-137)||(35541242-35541353)
chr1 (50-136)||(2491429-2491515)
chr1 (47-99)||(31779477-31779529)
chr1 (76-136)||(22191618-22191678)
[»] chr4 (11 HSPs)
chr4 (24-137)||(15740412-15740525)
chr4 (24-137)||(19755458-19755571)
chr4 (24-137)||(19784235-19784348)
chr4 (24-137)||(47685731-47685844)
chr4 (26-137)||(23642427-23642538)
chr4 (26-137)||(47418997-47419108)
chr4 (47-137)||(1828376-1828466)
chr4 (44-105)||(54483027-54483088)
chr4 (47-106)||(46145889-46145948)
chr4 (59-102)||(48312321-48312364)
chr4 (44-93)||(2821917-2821966)
[»] scaffold0472 (1 HSPs)
scaffold0472 (24-137)||(3443-3556)
[»] scaffold0034 (1 HSPs)
scaffold0034 (26-137)||(105679-105790)
[»] chr2 (2 HSPs)
chr2 (28-137)||(41207211-41207320)
chr2 (44-105)||(40176879-40176940)


Alignment Details
Target: chr3 (Bit Score: 212; Significance: 1e-116; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 24 - 247
Target Start/End: Original strand, 7032497 - 7032720
Alignment:
Q  24 aaagccatctatctatcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacg 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  7032497 aaagccatctatctatcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagcccacaaacgcctacg 7032596  T
Q  124 ccaccgcaacgccttctcaaaaactcaactctatcaaaatcaattttcacaaccgttaaaaccaaacacacgctatataaaggagagaatgagtggttaa 223  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  7032597 ccaccgcaacaccttctcaaaaactcaactctatcaaaatcaattttcaccaccgttaaaaccaaacacacgctatataaaggagagaatgagtggttaa 7032696  T
Q  224 gagagataagaagataggtagtta 247  Q
    ||||||||||||||||||||||||    
T  7032697 gagagataagaagataggtagtta 7032720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 26 - 137
Target Start/End: Original strand, 7312969 - 7313080
Alignment:
Q  26 agccatctatctatcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacgcc 125  Q
    |||||||| |||||||| ||||||||||| | |||||||||||| ||||||||| |||||||||||||||| |||||||||| |||||| ||||||||||    
T  7312969 agccatctgtctatcactgattcctgcaaagaaactgttagtaacaaagccctacactcctctaccaactcctcctcccaagcccacaaccgcctacgcc 7313068  T
Q  126 accgcaacgcct 137  Q
    ||| ||||||||    
T  7313069 acctcaacgcct 7313080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 26 - 137
Target Start/End: Complemental strand, 10323518 - 10323407
Alignment:
Q  26 agccatctatctatcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacgcc 125  Q
    ||||||||||||| ||| || |||||||| | |||||||||||| ||||||||| |||||||||||||||| |||||||||| |||||| ||||||||||    
T  10323518 agccatctatctaacactgaatcctgcaaagaaactgttagtaacaaagccctacactcctctaccaactcctcctcccaagcccacaaccgcctacgcc 10323419  T
Q  126 accgcaacgcct 137  Q
    ||||||||||||    
T  10323418 accgcaacgcct 10323407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 24 - 137
Target Start/End: Complemental strand, 34332764 - 34332651
Alignment:
Q  24 aaagccatctatctatcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacg 123  Q
    |||||||||| |||  ||| ||||||||||| | |||||||||||||||| ||||| |||||||||||||||| |||||||||| |||||| ||||||||    
T  34332764 aaagccatctgtctgacactgattcctgcaaagaaactgttagtaataaaaccctacactcctctaccaactcctcctcccaagcccacaaccgcctacg 34332665  T
Q  124 ccaccgcaacgcct 137  Q
    ||||||||||||||    
T  34332664 ccaccgcaacgcct 34332651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 137
Target Start/End: Original strand, 2364470 - 2364581
Alignment:
Q  26 agccatctatctatcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacgcc 125  Q
    |||||||| |||| ||| ||||||||||| | |||||||||||| ||||||||| |||||||||||||||| |||||||||| |||||| ||||||||||    
T  2364470 agccatctgtctaacactgattcctgcaaagaaactgttagtaacaaagccctacactcctctaccaactcctcctcccaagcccacaaccgcctacgcc 2364569  T
Q  126 accgcaacgcct 137  Q
    ||| ||||||||    
T  2364570 acctcaacgcct 2364581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 137
Target Start/End: Complemental strand, 19920176 - 19920065
Alignment:
Q  26 agccatctatctatcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacgcc 125  Q
    |||||||| |||||||| ||||||||||| | |||||||||||| ||||||||| |||||||||||||||| |||||||||| |||||| | |||||| |    
T  19920176 agccatctgtctatcactgattcctgcaaagaaactgttagtaacaaagccctacactcctctaccaactcctcctcccaagcccacaacctcctacgac 19920077  T
Q  126 accgcaacgcct 137  Q
    ||| ||| ||||    
T  19920076 acctcaatgcct 19920065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 24 - 112
Target Start/End: Complemental strand, 40930477 - 40930389
Alignment:
Q  24 aaagccatctatctatcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccac 112  Q
    |||||||||||| | |||| ||||| ||||| | |||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||    
T  40930477 aaagccatctatttgtcactgattcttgcaaagaaactgttagtaataaaaccctacactcctctaccaactcttcctcccaagcccac 40930389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 136
Target Start/End: Complemental strand, 963089 - 963000
Alignment:
Q  47 tcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacgccaccgcaacgcc 136  Q
    |||||||| |||||||| ||||||||  ||||| ||||||||||||| ||||||||||||  |||||| || | ||||||| || |||||    
T  963089 tcctgcaaagtaactgtaagtaataattccctacactcctctaccaattcttcctcccaaacccacaagcggcgacgccactgccacgcc 963000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 106
Target Start/End: Original strand, 3141066 - 3141125
Alignment:
Q  47 tcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaa 106  Q
    |||||||| |||||||| |||||||   ||||| ||||||||||||||||||||||||||    
T  3141066 tcctgcaaagtaactgtaagtaatagttccctacactcctctaccaactcttcctcccaa 3141125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 105
Target Start/End: Complemental strand, 48569968 - 48569907
Alignment:
Q  44 gattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctccca 105  Q
    ||||||||||| |  |||||||||| |||||||||| ||||||||||||| || ||||||||    
T  48569968 gattcctgcaaagagactgttagtagtaaagccctacactcctctaccaagtcctcctccca 48569907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 2756056 - 2756136
Alignment:
Q  47 tcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacgccac 127  Q
    |||||||| |||| ||| |||||||   ||||| |||||||||| |||||||||||||||  |||||| || | |||||||    
T  2756056 tcctgcaaagtaagtgtaagtaatagttccctacactcctctacaaactcttcctcccaaacccacaagcggcgacgccac 2756136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 86; Significance: 3e-41; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 31641706 - 31641815
Alignment:
Q  28 ccatctatctatcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacgccac 127  Q
    |||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  31641706 ccatctatctgtcactgattcctgcaatgaaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagcccacaaccgcctacgccac 31641805  T
Q  128 cgcaacgcct 137  Q
    | ||||||||    
T  31641806 ctcaacgcct 31641815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 24 - 137
Target Start/End: Complemental strand, 28535624 - 28535511
Alignment:
Q  24 aaagccatctatctatcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacg 123  Q
    |||||||||||||| |||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| | ||||||    
T  28535624 aaagccatctatctgtcattgattcctgcaatgaaactgttagtaataaagccctaaactcctctaccaactcttcctctcaagcccacaaccacctacg 28535525  T
Q  124 ccaccgcaacgcct 137  Q
    ||||| ||||||||    
T  28535524 ccacctcaacgcct 28535511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 24 - 137
Target Start/End: Complemental strand, 35983740 - 35983627
Alignment:
Q  24 aaagccatctatctatcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacg 123  Q
    ||||| |||||||| |||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||| ||||||||    
T  35983740 aaagctatctatctgtcactgattcctgtaatgaaactgttagtaataaagccctaaactcctctaccaactcctcctcctaagcccacaaccgcctacg 35983641  T
Q  124 ccaccgcaacgcct 137  Q
    ||||| ||||||||    
T  35983640 ccacctcaacgcct 35983627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 26 - 137
Target Start/End: Complemental strand, 30732261 - 30732150
Alignment:
Q  26 agccatctatctatcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacgcc 125  Q
    |||||||| |||||||| ||||||||||| | |||||||||||| ||||||||| |||||||||||||||| |||||||||| |||||| ||||||||||    
T  30732261 agccatctgtctatcactgattcctgcaaagaaactgttagtaacaaagccctacactcctctaccaactcctcctcccaagcccacaaccgcctacgcc 30732162  T
Q  126 accgcaacgcct 137  Q
    ||| ||||||||    
T  30732161 acctcaacgcct 30732150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 137
Target Start/End: Original strand, 12825392 - 12825503
Alignment:
Q  26 agccatctatctatcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacgcc 125  Q
    |||||||| |||||||| ||||||||||| | |||||||||||| ||||||||| |||||||||||||||| || ||||||| |||||| ||||||||||    
T  12825392 agccatctgtctatcactgattcctgcaaagaaactgttagtaacaaagccctacactcctctaccaactcctcatcccaagcccacaaccgcctacgcc 12825491  T
Q  126 accgcaacgcct 137  Q
    ||| ||||||||    
T  12825492 acctcaacgcct 12825503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 26 - 137
Target Start/End: Complemental strand, 27117108 - 27116997
Alignment:
Q  26 agccatctatctatcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacgcc 125  Q
    |||||||| |||||||| ||||||||||| | |||||||||||| ||||||||| |||||||||||||| | |||||||| | |||||| ||||||||||    
T  27117108 agccatctgtctatcactgattcctgcaaagaaactgttagtaacaaagccctacactcctctaccaacccctcctcccaggcccacaaccgcctacgcc 27117009  T
Q  126 accgcaacgcct 137  Q
    ||| ||||||||    
T  27117008 acctcaacgcct 27116997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 26 - 137
Target Start/End: Original strand, 42513913 - 42514024
Alignment:
Q  26 agccatctatctatcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacgcc 125  Q
    |||||||| |||| ||| || |||||||| | |||||||||||| ||||||||| |||||||||||||||| |||||||||| |||||| ||||||||||    
T  42513913 agccatctgtctaacactgagtcctgcaaagaaactgttagtaacaaagccctacactcctctaccaactcctcctcccaagcccacaaccgcctacgcc 42514012  T
Q  126 accgcaacgcct 137  Q
    ||| ||||||||    
T  42514013 acctcaacgcct 42514024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 24 - 137
Target Start/End: Original strand, 23238575 - 23238688
Alignment:
Q  24 aaagccatctatctatcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacg 123  Q
    |||||||||| ||| |||| ||||||||||| | ||||||||| |||||||||||| |||||||||||||||| |||||||  | |||||| | ||||||    
T  23238575 aaagccatctgtctgtcactgattcctgcaaagaaactgttagcaataaagccctacactcctctaccaactcctcctccctggcccacaacctcctacg 23238674  T
Q  124 ccaccgcaacgcct 137  Q
    ||||||||||||||    
T  23238675 ccaccgcaacgcct 23238688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 42928326 - 42928435
Alignment:
Q  28 ccatctatctatcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacgccac 127  Q
    |||||||||| |||| |||||||| ||   ||| || ||||||||| ||||| ||||||||||||||||||||||||||| |||||| |||| |||||||    
T  42928326 ccatctatctgtcactgattcctgtaaaaaaacggtaagtaataaaaccctacactcctctaccaactcttcctcccaagcccacaaccgccgacgccac 42928425  T
Q  128 cgcaacgcct 137  Q
     |||||||||    
T  42928426 tgcaacgcct 42928435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 24408142 - 24408222
Alignment:
Q  47 tcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacgccac 127  Q
    |||||||| |||||||| |||||||   ||||| ||||||||||||||||||||||||||| |||||| || | |||||||    
T  24408142 tcctgcaaagtaactgtaagtaatagttccctacactcctctaccaactcttcctcccaagcccacaagcgacgacgccac 24408222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 105
Target Start/End: Original strand, 27795694 - 27795755
Alignment:
Q  44 gattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctccca 105  Q
    ||||||| ||| | |||||||||||||||||||||| ||||||||||||| || ||||||||    
T  27795694 gattcctccaaagaaactgttagtaataaagccctacactcctctaccaagtcctcctccca 27795755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 114
Target Start/End: Complemental strand, 18089687 - 18089620
Alignment:
Q  47 tcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaa 114  Q
    ||||||||||||||||| ||||| | | ||||| ||||||||| ||||| ||||||||||| ||||||    
T  18089687 tcctgcaatgtaactgtaagtaaaagatccctacactcctctatcaacttttcctcccaagcccacaa 18089620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 106
Target Start/End: Original strand, 33169872 - 33169931
Alignment:
Q  47 tcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaa 106  Q
    |||||||| |||||||| ||||||||  ||||| |||||||||||||||| |||||||||    
T  33169872 tcctgcaaagtaactgtaagtaataattccctacactcctctaccaactcgtcctcccaa 33169931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 2e-39; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 17720830 - 17720939
Alignment:
Q  28 ccatctatctatcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacgccac 127  Q
    |||||||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  17720830 ccatctatctgtcactgattcctgcaatgaaactgttagtaataaagccntaaactcctctaccaactcttcctcccaagcccacaaccgcctacgccac 17720929  T
Q  128 cgcaacgcct 137  Q
    | ||||||||    
T  17720930 ctcaacgcct 17720939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 24 - 137
Target Start/End: Complemental strand, 11277201 - 11277088
Alignment:
Q  24 aaagccatctatctatcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacg 123  Q
    |||||||||| ||| |||| ||||||||||| | ||||||||| |||||||||||| |||||||||||||||| |||||||||| |||||| ||||||||    
T  11277201 aaagccatctgtctgtcactgattcctgcaaagaaactgttagcaataaagccctacactcctctaccaactcctcctcccaagcccacaaccgcctacg 11277102  T
Q  124 ccaccgcaacgcct 137  Q
    ||||||||||||||    
T  11277101 ccaccgcaacgcct 11277088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 24 - 137
Target Start/End: Original strand, 47877174 - 47877287
Alignment:
Q  24 aaagccatctatctatcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacg 123  Q
    |||| ||||| ||| |||| ||||||||||| | |||||||||||||||| ||| | ||||||||||||||||||||||||||| |||||| ||||||||    
T  47877174 aaagtcatctgtctgtcactgattcctgcaaggaaactgttagtaataaaaccccacactcctctaccaactcttcctcccaagcccacaaccgcctacg 47877273  T
Q  124 ccaccgcaacgcct 137  Q
    ||||||||||||||    
T  47877274 ccaccgcaacgcct 47877287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 26 - 137
Target Start/End: Complemental strand, 4938075 - 4937964
Alignment:
Q  26 agccatctatctatcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacgcc 125  Q
    |||||||| |||| ||| || |||||||| | |||||||||||| ||||||||| |||||||||||||||| |||||||||| |||||| ||||||||||    
T  4938075 agccatctgtctaacactgagtcctgcaaagaaactgttagtaacaaagccctacactcctctaccaactcctcctcccaagcccacaaccgcctacgcc 4937976  T
Q  126 accgcaacgcct 137  Q
    ||| ||||||||    
T  4937975 acctcaacgcct 4937964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 24 - 137
Target Start/End: Complemental strand, 235386 - 235273
Alignment:
Q  24 aaagccatctatctatcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacg 123  Q
    |||| ||||||||| |||| |||||||| || | |||||||||||||||| ||||| ||||||||||||||| ||||||||||| |||||| |||  |||    
T  235386 aaagtcatctatctgtcactgattcctgtaaggaaactgttagtaataaaaccctacactcctctaccaacttttcctcccaagcccacaatcgctgacg 235287  T
Q  124 ccaccgcaacgcct 137  Q
    ||||||||||||||    
T  235286 ccaccgcaacgcct 235273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 137
Target Start/End: Original strand, 29968165 - 29968278
Alignment:
Q  24 aaagccatctatctatcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacg 123  Q
    |||||||||| ||| |||| ||||||||||| | ||||||||| |||||||||||| ||||||||||||| || ||||| |||| ||| || | ||||||    
T  29968165 aaagccatctgtctgtcactgattcctgcaaagaaactgttagcaataaagccctacactcctctaccaattcctcctctcaagcccataacctcctacg 29968264  T
Q  124 ccaccgcaacgcct 137  Q
    ||||||||||||||    
T  29968265 ccaccgcaacgcct 29968278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 39 - 133
Target Start/End: Original strand, 37919750 - 37919844
Alignment:
Q  39 tcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacgccaccgcaac 133  Q
    |||| ||||||||||| | |||||||||||||||| | ||| |||||||||||||||  |||||||||| |||||| ||||||||||||||||||    
T  37919750 tcactgattcctgcaaagaaactgttagtaataaaactctacactcctctaccaacttctcctcccaagcccacaaccgcctacgccaccgcaac 37919844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 114
Target Start/End: Complemental strand, 27854339 - 27854301
Alignment:
Q  76 cctaaactcctctaccaactcttcctcccaagtccacaa 114  Q
    ||||| |||||||||||||||||||||||||| ||||||    
T  27854339 cctaagctcctctaccaactcttcctcccaagcccacaa 27854301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 8e-39; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 9922796 - 9922905
Alignment:
Q  28 ccatctatctatcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacgccac 127  Q
    |||||||||| |||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||    
T  9922796 ccatctatctgtcactgattcctgcaatgaaactgttagtaataaagccctagactcctctaccaactcttcctcccaagcccacaaccgcctacgccac 9922895  T
Q  128 cgcaacgcct 137  Q
    | ||||||||    
T  9922896 ctcaacgcct 9922905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 24 - 137
Target Start/End: Original strand, 13396579 - 13396692
Alignment:
Q  24 aaagccatctatctatcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacg 123  Q
    |||||||||| ||| |||| ||||||||||| | || ||||||||||||| ||||| |||||||||||||||| |||||||||| |||||| ||||||||    
T  13396579 aaagccatctgtctgtcactgattcctgcaaagaaattgttagtaataaaaccctacactcctctaccaactcctcctcccaagcccacaaccgcctacg 13396678  T
Q  124 ccaccgcaacgcct 137  Q
    ||||||||||||||    
T  13396679 ccaccgcaacgcct 13396692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 26 - 137
Target Start/End: Original strand, 7924579 - 7924690
Alignment:
Q  26 agccatctatctatcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacgcc 125  Q
    |||||||| |||| ||| || |||||||| | |||||||||||| ||||||||| |||||||||||||||| |||||||||| |||||| ||||||||||    
T  7924579 agccatctgtctaacactgagtcctgcaaagaaactgttagtaacaaagccctacactcctctaccaactcctcctcccaagcccacaaccgcctacgcc 7924678  T
Q  126 accgcaacgcct 137  Q
    ||| ||||||||    
T  7924679 acctcaacgcct 7924690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 26 - 137
Target Start/End: Original strand, 8299996 - 8300107
Alignment:
Q  26 agccatctatctatcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacgcc 125  Q
    |||||||| |||| ||| ||||||||||| | |||||||||||| ||||||||| |||||||||||||||| |||||||||| |||||| |||| |||||    
T  8299996 agccatctgtctaacactgattcctgcaaagaaactgttagtaacaaagccctacactcctctaccaactcctcctcccaagcccacaaccgccgacgcc 8300095  T
Q  126 accgcaacgcct 137  Q
    ||| ||||||||    
T  8300096 acctcaacgcct 8300107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 24 - 137
Target Start/End: Original strand, 32266753 - 32266866
Alignment:
Q  24 aaagccatctatctatcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacg 123  Q
    |||||||||| |||  ||| ||||||||||| | ||||||||| |||||||||||| |||||||||||||||| |||||||| | |||||| | ||||||    
T  32266753 aaagccatctgtctgacactgattcctgcaaagaaactgttagcaataaagccctacactcctctaccaactcctcctcccaggcccacaacctcctacg 32266852  T
Q  124 ccaccgcaacgcct 137  Q
    ||||||||||||||    
T  32266853 ccaccgcaacgcct 32266866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 24 - 133
Target Start/End: Complemental strand, 41665318 - 41665209
Alignment:
Q  24 aaagccatctatctatcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacg 123  Q
    |||| ||||| ||| |||| |||||||| || | |||||||||||||||| ||||| |||||||||||||||| |||||||||| |||||| ||||||||    
T  41665318 aaagtcatctgtctgtcactgattcctgtaaagaaactgttagtaataaaaccctacactcctctaccaactcctcctcccaagcccacaaccgcctacg 41665219  T
Q  124 ccaccgcaac 133  Q
    ||||||||||    
T  41665218 ccaccgcaac 41665209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 137
Target Start/End: Original strand, 172296 - 172407
Alignment:
Q  26 agccatctatctatcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacgcc 125  Q
    |||||||| |||||||| ||||||||||| | |||| ||||||| ||||||||| |||||||||||||||  |||||||| | |||||| ||||||||||    
T  172296 agccatctgtctatcactgattcctgcaaagaaactattagtaacaaagccctacactcctctaccaacttctcctcccaggcccacaaccgcctacgcc 172395  T
Q  126 accgcaacgcct 137  Q
    ||| ||||||||    
T  172396 acctcaacgcct 172407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 105
Target Start/End: Complemental strand, 13879416 - 13879355
Alignment:
Q  44 gattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctccca 105  Q
    ||||||||||| |  ||||||||||||||||||||| ||||||||||||| || ||||||||    
T  13879416 gattcctgcaaagagactgttagtaataaagccctacactcctctaccaagtcctcctccca 13879355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 25090598 - 25090647
Alignment:
Q  44 gattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaa 93  Q
    ||||||||||| |  ||||||||||||||||||||| |||||||||||||    
T  25090598 gattcctgcaaagagactgttagtaataaagccctacactcctctaccaa 25090647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 2e-36; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 24 - 137
Target Start/End: Original strand, 21168390 - 21168503
Alignment:
Q  24 aaagccatctatctatcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacg 123  Q
    |||||||||| ||| |||| ||||||||||| | |||||||||||||||||||||| |||||||||||||||| |||||||||| |||||| ||||||||    
T  21168390 aaagccatctgtctgtcactgattcctgcaaagaaactgttagtaataaagccctacactcctctaccaactcctcctcccaagcccacaaccgcctacg 21168489  T
Q  124 ccaccgcaacgcct 137  Q
    ||||||||||||||    
T  21168490 ccaccgcaacgcct 21168503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 2553828 - 2553939
Alignment:
Q  24 aaagccatctatctatcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacg 123  Q
    |||||||||| ||| |||| ||||||||||| | |||||||||||||||||||||| |||||| ||||||||  | |||||||| |||||| ||||||||    
T  2553828 aaagccatctgtctgtcactgattcctgcaaagaaactgttagtaataaagccctacactcctttaccaacttctactcccaagcccacaaccgcctacg 2553927  T
Q  124 ccaccgcaacgc 135  Q
    ||||||||||||    
T  2553928 ccaccgcaacgc 2553939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 58 - 137
Target Start/End: Complemental strand, 24767344 - 24767265
Alignment:
Q  58 aactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacgccaccgcaacgcct 137  Q
    |||||||||||||| | ||||| ||||||||||||||||||||||||||| |||||| || | |||||||||||||||||    
T  24767344 aactgttagtaatacaaccctacactcctctaccaactcttcctcccaagcccacaaccgtcgacgccaccgcaacgcct 24767265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 13937914 - 13937994
Alignment:
Q  47 tcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacgccac 127  Q
    |||||||| |||||||| ||||||||  ||||| ||||||||||||||||||||||||||  |||||| || | |||||||    
T  13937914 tcctgcaaagtaactgtaagtaataattccctacactcctctaccaactcttcctcccaaacccacaagcggcgacgccac 13937994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 106
Target Start/End: Complemental strand, 18682451 - 18682401
Alignment:
Q  56 gtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaa 106  Q
    |||||||| ||||||| ||||||| |||||||| |||||||||||||||||    
T  18682451 gtaactgtgagtaatagagccctacactcctctgccaactcttcctcccaa 18682401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 117
Target Start/End: Original strand, 33185678 - 33185719
Alignment:
Q  76 cctaaactcctctaccaactcttcctcccaagtccacaaacg 117  Q
    |||| ||||||||||||||||||||||||| |||||||||||    
T  33185678 cctacactcctctaccaactcttcctcccatgtccacaaacg 33185719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 90
Target Start/End: Complemental strand, 14372920 - 14372874
Alignment:
Q  44 gattcctgcaatgtaactgttagtaataaagccctaaactcctctac 90  Q
    ||||||||||| | |||||| ||||||||||||||| ||||||||||    
T  14372920 gattcctgcaaagaaactgtcagtaataaagccctacactcctctac 14372874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 7e-33; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 26 - 137
Target Start/End: Complemental strand, 11909052 - 11908941
Alignment:
Q  26 agccatctatctatcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacgcc 125  Q
    |||||||| |||||||| ||||||||||| | |||||||||||| ||||||||| |||||||||||||||| |||||||||| |||||| ||||||||||    
T  11909052 agccatctgtctatcactgattcctgcaaagaaactgttagtaacaaagccctacactcctctaccaactcctcctcccaagcccacaaccgcctacgcc 11908953  T
Q  126 accgcaacgcct 137  Q
    ||| ||||||||    
T  11908952 acctcaacgcct 11908941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 26 - 137
Target Start/End: Original strand, 6050796 - 6050907
Alignment:
Q  26 agccatctatctatcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacgcc 125  Q
    |||||||| |||| ||| || |||||||| | |||||||||||| ||||||||| |||||||||||||||| |||||||||| |||||| ||||||||||    
T  6050796 agccatctgtctaacactgagtcctgcaaagaaactgttagtaacaaagccctacactcctctaccaactcctcctcccaagcccacaaccgcctacgcc 6050895  T
Q  126 accgcaacgcct 137  Q
    ||| ||||||||    
T  6050896 acctcaacgcct 6050907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 26 - 137
Target Start/End: Original strand, 35541242 - 35541353
Alignment:
Q  26 agccatctatctatcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacgcc 125  Q
    |||||||| |||| ||| |||||||||||   |||||||||||| ||||||||| |||||||||||||||| |||||||||| |||||| |||| |||||    
T  35541242 agccatctgtctaacactgattcctgcaaaaaaactgttagtaacaaagccctacactcctctaccaactcctcctcccaagcccacaaccgccgacgcc 35541341  T
Q  126 accgcaacgcct 137  Q
    ||| ||||||||    
T  35541342 acctcaacgcct 35541353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 50 - 136
Target Start/End: Original strand, 2491429 - 2491515
Alignment:
Q  50 tgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacgccaccgcaacgcc 136  Q
    ||||| |||||||| |||||||   ||||| ||||||||||||||||||||||||||| ||||||||| | ||||||| || |||||    
T  2491429 tgcaaagtaactgtaagtaatagtaccctacactcctctaccaactcttcctcccaagcccacaaacgacgacgccactgccacgcc 2491515  T

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Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 31779477 - 31779529
Alignment:
Q  47 tcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttc 99  Q
    ||||||||||||||||| |||||||   ||||| |||||||||||||||||||    
T  31779477 tcctgcaatgtaactgtgagtaatagttccctacactcctctaccaactcttc 31779529  T

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Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 136
Target Start/End: Complemental strand, 22191678 - 22191618
Alignment:
Q  76 cctaaactcctctaccaactcttcctcccaagtccacaaacgcctacgccaccgcaacgcc 136  Q
    |||| ||||| |||||||||| |||||||| | |||||| |||||||||||| || |||||    
T  22191678 cctacactcccctaccaactcctcctcccatgcccacaaccgcctacgccactgccacgcc 22191618  T

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Target: chr4 (Bit Score: 70; Significance: 1e-31; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 24 - 137
Target Start/End: Original strand, 15740412 - 15740525
Alignment:
Q  24 aaagccatctatctatcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacg 123  Q
    |||||||||| ||| |||| ||||||||||| | |||||||||||||||||||||| |||||||||||||||| |||||||||| |||||| |||||| |    
T  15740412 aaagccatctgtctgtcactgattcctgcaaagaaactgttagtaataaagccctacactcctctaccaactcctcctcccaagcccacaaccgcctatg 15740511  T
Q  124 ccaccgcaacgcct 137  Q
    |||| |||||||||    
T  15740512 ccactgcaacgcct 15740525  T

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Target: chr4; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 137
Target Start/End: Original strand, 19755458 - 19755571
Alignment:
Q  24 aaagccatctatctatcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacg 123  Q
    |||||||||| ||| |||| ||||||||||| | |||| ||||||||||| ||||| |||||||||||||||| |||||| ||| |||||| ||||||||    
T  19755458 aaagccatctgtctgtcactgattcctgcaaagaaactattagtaataaaaccctacactcctctaccaactcctcctcctaagcccacaaccgcctacg 19755557  T
Q  124 ccaccgcaacgcct 137  Q
    ||||||||||||||    
T  19755558 ccaccgcaacgcct 19755571  T

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Target: chr4; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 137
Target Start/End: Complemental strand, 19784348 - 19784235
Alignment:
Q  24 aaagccatctatctatcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacg 123  Q
    |||||||||| ||| |||| ||||||||||| | |||| ||||||||||| ||||| |||||||||||||||| |||||| ||| |||||| ||||||||    
T  19784348 aaagccatctgtctgtcactgattcctgcaaagaaactattagtaataaaaccctacactcctctaccaactcctcctcctaagcccacaaccgcctacg 19784249  T
Q  124 ccaccgcaacgcct 137  Q
    ||||||||||||||    
T  19784248 ccaccgcaacgcct 19784235  T

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Target: chr4; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 137
Target Start/End: Complemental strand, 47685844 - 47685731
Alignment:
Q  24 aaagccatctatctatcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacg 123  Q
    |||||||||| |||||||||||||||||||| | |||||||||||| ||||||||| |||||||||||||||| |||||||||| |||||  |||| |||    
T  47685844 aaagccatctgtctatcaccgattcctgcaaagaaactgttagtaacaaagccctacactcctctaccaactcctcctcccaagcccacagccgcccacg 47685745  T
Q  124 ccaccgcaacgcct 137  Q
    ||||| ||| ||||    
T  47685744 ccacctcaatgcct 47685731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 26 - 137
Target Start/End: Complemental strand, 23642538 - 23642427
Alignment:
Q  26 agccatctatctatcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacgcc 125  Q
    |||||||| |||| ||| || |||||||| | |||||||||||| ||||||||| |||||||||||||||| |||||||||| |||||| ||||||||||    
T  23642538 agccatctgtctaacactgagtcctgcaaagaaactgttagtaacaaagccctacactcctctaccaactcctcctcccaagcccacaaccgcctacgcc 23642439  T
Q  126 accgcaacgcct 137  Q
    ||| ||||||||    
T  23642438 acctcaacgcct 23642427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 26 - 137
Target Start/End: Original strand, 47418997 - 47419108
Alignment:
Q  26 agccatctatctatcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacgcc 125  Q
    ||||||||||||| ||| || |||||||| | || ||||||||| ||||||||| |||||||||||| ||| |||||||||| |||||| ||||||||||    
T  47418997 agccatctatctaacactgaatcctgcaaagaaattgttagtaacaaagccctacactcctctaccacctcctcctcccaagcccacaaccgcctacgcc 47419096  T
Q  126 accgcaacgcct 137  Q
    ||||||||||||    
T  47419097 accgcaacgcct 47419108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 137
Target Start/End: Complemental strand, 1828466 - 1828376
Alignment:
Q  47 tcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacgccaccgcaacgcct 137  Q
    |||||||| | |||||||||||||||||||||  |||||||||||||||| |||||||||| |||||| |||||| |||||| ||||||||    
T  1828466 tcctgcaaagaaactgttagtaataaagccctccactcctctaccaactcctcctcccaagcccacaaccgcctatgccaccacaacgcct 1828376  T

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Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 44 - 105
Target Start/End: Complemental strand, 54483088 - 54483027
Alignment:
Q  44 gattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctccca 105  Q
    ||||||||||| |  ||||||||||||||| ||||| ||||||||||||| || ||||||||    
T  54483088 gattcctgcaaagagactgttagtaataaacccctacactcctctaccaaatcctcctccca 54483027  T

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Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 106
Target Start/End: Original strand, 46145889 - 46145948
Alignment:
Q  47 tcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaa 106  Q
    |||||||| |||||||| |||||||   ||||| |||||||| |||||||||||||||||    
T  46145889 tcctgcaaagtaactgtaagtaatagttccctacactcctctgccaactcttcctcccaa 46145948  T

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Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 102
Target Start/End: Original strand, 48312321 - 48312364
Alignment:
Q  59 actgttagtaataaagccctaaactcctctaccaactcttcctc 102  Q
    ||||||||||||||||||||| ||||||||||||| || |||||    
T  48312321 actgttagtaataaagccctacactcctctaccaagtcctcctc 48312364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 2821966 - 2821917
Alignment:
Q  44 gattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaa 93  Q
    ||||||||||| |  |||||||||| |||||||||| |||||||||||||    
T  2821966 gattcctgcaaagagactgttagtattaaagccctacactcctctaccaa 2821917  T

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Target: scaffold0472 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 137
Target Start/End: Original strand, 3443 - 3556
Alignment:
Q  24 aaagccatctatctatcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacg 123  Q
    |||||||||| ||| |||| |||||||| || | |||||||||||||||||||||| |||||||||||||||| |||||||| | |||||| | ||||||    
T  3443 aaagccatctgtctgtcactgattcctgtaaagaaactgttagtaataaagccctacactcctctaccaactcctcctcccaggcccacaacctcctacg 3542  T
Q  124 ccaccgcaacgcct 137  Q
    ||||||||||||||    
T  3543 ccaccgcaacgcct 3556  T

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Target: scaffold0034 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 26 - 137
Target Start/End: Complemental strand, 105790 - 105679
Alignment:
Q  26 agccatctatctatcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacgcc 125  Q
    |||||||| |||| ||| || |||||||| | |||||||||||| ||||||||| |||||||||||||||| |||||||||| |||||| ||||||||||    
T  105790 agccatctgtctaacactgagtcctgcaaagaaactgttagtaacaaagccctacactcctctaccaactcctcctcccaagcccacaaccgcctacgcc 105691  T
Q  126 accgcaacgcct 137  Q
    ||| ||||||||    
T  105690 acctcaacgcct 105679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 137
Target Start/End: Original strand, 41207211 - 41207320
Alignment:
Q  28 ccatctatctatcaccgattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctcccaagtccacaaacgcctacgccac 127  Q
    ||||||||||  ||| ||||||||||| | |||||| | ||||||| ||||| ||||||||||||||||||||||||| | |||||| || | ||||||     
T  41207211 ccatctatctgccactgattcctgcaaggaaactgtaaataataaaaccctacactcctctaccaactcttcctcccatgcccacaaccgacgacgccat 41207310  T
Q  128 cgcaacgcct 137  Q
     |||||||||    
T  41207311 tgcaacgcct 41207320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 44 - 105
Target Start/End: Original strand, 40176879 - 40176940
Alignment:
Q  44 gattcctgcaatgtaactgttagtaataaagccctaaactcctctaccaactcttcctccca 105  Q
    ||||||||||| |  ||||||||||||||||||||| ||||||||||||| || ||||||||    
T  40176879 gattcctgcaaagagactgttagtaataaagccctacactcctctaccaagtcctcctccca 40176940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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