View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10152_5 (Length: 418)

Name: NF10152_5
Description: NF10152
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10152_5
NF10152_5
[»] chr3 (21 HSPs)
chr3 (342-406)||(46941054-46941118)
chr3 (342-406)||(42100689-42100753)
chr3 (342-406)||(54237097-54237161)
chr3 (341-406)||(42394454-42394519)
chr3 (342-406)||(45126963-45127027)
chr3 (342-406)||(25413682-25413746)
chr3 (342-406)||(40808866-40808930)
chr3 (342-406)||(47191061-47191124)
chr3 (342-406)||(53273719-53273783)
chr3 (342-406)||(54246183-54246247)
chr3 (342-406)||(24688437-24688501)
chr3 (343-400)||(1078229-1078286)
chr3 (342-398)||(25996269-25996325)
chr3 (345-405)||(29558270-29558330)
chr3 (343-406)||(27748565-27748628)
chr3 (341-406)||(40480749-40480814)
chr3 (342-406)||(36150131-36150195)
chr3 (343-406)||(53581893-53581956)
chr3 (342-402)||(9434125-9434185)
chr3 (342-406)||(4190300-4190364)
chr3 (342-406)||(10457927-10457991)
[»] chr1 (16 HSPs)
chr1 (342-406)||(43571121-43571185)
chr1 (342-406)||(5489777-5489841)
chr1 (342-406)||(37814779-37814843)
chr1 (343-398)||(7447828-7447882)
chr1 (342-406)||(750340-750404)
chr1 (343-406)||(4401329-4401393)
chr1 (342-406)||(24769534-24769598)
chr1 (342-406)||(48498997-48499061)
chr1 (342-406)||(38335919-38335983)
chr1 (342-402)||(44112678-44112738)
chr1 (342-406)||(48119629-48119693)
chr1 (342-406)||(50448295-50448359)
chr1 (343-406)||(2497597-2497660)
chr1 (342-406)||(35003295-35003359)
chr1 (342-406)||(45639767-45639831)
chr1 (342-406)||(46168384-46168448)
[»] scaffold0119 (1 HSPs)
scaffold0119 (342-406)||(686-750)
[»] chr8 (23 HSPs)
chr8 (342-406)||(11582767-11582831)
chr8 (342-406)||(36743518-36743582)
chr8 (343-406)||(42295197-42295260)
chr8 (342-406)||(29705363-29705427)
chr8 (342-406)||(30660777-30660841)
chr8 (342-406)||(5754904-5754968)
chr8 (343-406)||(29800985-29801048)
chr8 (341-406)||(45397316-45397381)
chr8 (343-406)||(20148762-20148825)
chr8 (343-406)||(26125637-26125700)
chr8 (343-406)||(30912597-30912660)
chr8 (343-406)||(42699259-42699322)
chr8 (342-406)||(2165998-2166062)
chr8 (342-406)||(2546997-2547061)
chr8 (342-406)||(18066753-18066817)
chr8 (342-402)||(34304789-34304849)
chr8 (342-406)||(42197470-42197534)
chr8 (349-406)||(31384672-31384729)
chr8 (342-406)||(1375543-1375607)
chr8 (342-402)||(35181517-35181577)
chr8 (343-402)||(33630032-33630091)
chr8 (342-374)||(9241565-9241597)
chr8 (342-374)||(28977147-28977179)
[»] chr7 (24 HSPs)
chr7 (342-406)||(24001047-24001111)
chr7 (342-406)||(42538466-42538530)
chr7 (342-406)||(35069722-35069786)
chr7 (342-406)||(42972853-42972917)
chr7 (343-406)||(43343659-43343722)
chr7 (343-406)||(44416969-44417032)
chr7 (342-406)||(5810959-5811023)
chr7 (343-406)||(10573751-10573814)
chr7 (343-406)||(44326180-44326243)
chr7 (342-406)||(5015396-5015460)
chr7 (342-406)||(5194266-5194330)
chr7 (342-406)||(39998409-39998473)
chr7 (342-402)||(40236920-40236980)
chr7 (342-406)||(45326021-45326085)
chr7 (363-406)||(32029852-32029895)
chr7 (342-406)||(9216303-9216366)
chr7 (342-406)||(43317444-43317508)
chr7 (344-406)||(26898437-26898499)
chr7 (342-376)||(38160659-38160693)
chr7 (361-406)||(27393295-27393340)
chr7 (357-406)||(38160614-38160663)
chr7 (343-406)||(4638234-4638297)
chr7 (342-398)||(41861675-41861731)
chr7 (342-394)||(47279744-47279796)
[»] chr6 (16 HSPs)
chr6 (342-406)||(9698368-9698432)
chr6 (342-406)||(26670044-26670108)
chr6 (342-406)||(3213401-3213465)
chr6 (342-406)||(7273370-7273434)
chr6 (342-406)||(7367550-7367614)
chr6 (342-406)||(13743256-13743320)
chr6 (342-406)||(13748756-13748820)
chr6 (342-406)||(30014344-30014408)
chr6 (342-406)||(21279930-21279994)
chr6 (342-406)||(21293712-21293776)
chr6 (342-406)||(26466800-26466864)
chr6 (343-406)||(24204022-24204085)
chr6 (342-406)||(7292748-7292812)
chr6 (342-406)||(31109257-31109321)
chr6 (343-406)||(30735984-30736047)
chr6 (342-398)||(33242404-33242460)
[»] chr5 (11 HSPs)
chr5 (342-406)||(2614684-2614748)
chr5 (342-406)||(33801470-33801534)
chr5 (342-400)||(33855084-33855142)
chr5 (342-406)||(18033983-18034047)
chr5 (342-406)||(22512306-22512370)
chr5 (343-399)||(25915029-25915085)
chr5 (342-406)||(41334698-41334762)
chr5 (343-406)||(5256997-5257060)
chr5 (342-406)||(7617134-7617198)
chr5 (342-406)||(38470580-38470644)
chr5 (342-406)||(32473429-32473493)
[»] chr4 (27 HSPs)
chr4 (342-406)||(33703142-33703206)
chr4 (342-406)||(1771301-1771365)
chr4 (342-406)||(35017734-35017797)
chr4 (342-406)||(27864565-27864629)
chr4 (342-406)||(55966381-55966445)
chr4 (343-406)||(27893877-27893940)
chr4 (343-406)||(43735744-43735807)
chr4 (344-406)||(23204813-23204875)
chr4 (342-406)||(23035981-23036045)
chr4 (342-406)||(25051694-25051758)
chr4 (342-406)||(27316748-27316812)
chr4 (342-406)||(27550310-27550374)
chr4 (342-402)||(28988474-28988534)
chr4 (343-406)||(43949836-43949900)
chr4 (342-406)||(48463485-48463549)
chr4 (342-406)||(12496957-12497021)
chr4 (342-406)||(28982857-28982921)
chr4 (343-406)||(39631102-39631166)
chr4 (342-406)||(41878407-41878471)
chr4 (343-406)||(43514721-43514784)
chr4 (342-399)||(41847972-41848029)
chr4 (342-406)||(55272411-55272475)
chr4 (342-398)||(32728358-32728414)
chr4 (343-406)||(3756281-3756344)
chr4 (342-404)||(45490350-45490412)
chr4 (342-406)||(711961-712025)
chr4 (342-406)||(17619187-17619251)
[»] chr2 (21 HSPs)
chr2 (342-406)||(30838633-30838697)
chr2 (341-406)||(19047157-19047222)
chr2 (342-406)||(1750415-1750479)
chr2 (342-406)||(16096748-16096812)
chr2 (342-406)||(43335798-43335862)
chr2 (343-406)||(43490436-43490499)
chr2 (342-406)||(12302288-12302352)
chr2 (343-406)||(33229303-33229367)
chr2 (340-393)||(34817824-34817877)
chr2 (342-402)||(12415499-12415559)
chr2 (342-402)||(12427559-12427619)
chr2 (342-398)||(4764769-4764825)
chr2 (342-402)||(43114558-43114618)
chr2 (343-402)||(11825693-11825752)
chr2 (343-402)||(41282013-41282072)
chr2 (343-384)||(7070418-7070459)
chr2 (342-398)||(966877-966933)
chr2 (342-406)||(13780770-13780834)
chr2 (342-402)||(16803969-16804029)
chr2 (342-402)||(16843251-16843311)
chr2 (342-374)||(42849913-42849945)
[»] scaffold0038 (1 HSPs)
scaffold0038 (341-406)||(112655-112720)
[»] scaffold0187 (2 HSPs)
scaffold0187 (342-406)||(14223-14287)
scaffold0187 (342-406)||(24551-24615)
[»] scaffold0385 (1 HSPs)
scaffold0385 (342-406)||(11252-11316)
[»] scaffold0157 (1 HSPs)
scaffold0157 (342-406)||(23456-23520)


Alignment Details
Target: chr3 (Bit Score: 61; Significance: 5e-26; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 46941054 - 46941118
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  46941054 gaaaatgttacatgaacaccctttattcctacatctcattgtacaccccatgtattagggatatt 46941118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 42100689 - 42100753
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  42100689 gaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatatt 42100753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 54237097 - 54237161
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||    
T  54237097 gaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatatt 54237161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 341 - 406
Target Start/End: Complemental strand, 42394519 - 42394454
Alignment:
Q  341 agaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    ||||||||||||||||||| |||||||||||||||  |||||||||||| ||||||||||||||||    
T  42394519 agaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatatt 42394454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 45127027 - 45126963
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    ||||||||||||| |||| ||||||||| |||||| |||||||||||||||||||||||||||||    
T  45127027 gaaaatgttacataaacaccctttattcatacatcccattgtacaccccatgtattagggatatt 45126963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 25413682 - 25413746
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| |||||||||||||| | |||||||||||  ||||||||||||||||    
T  25413682 gaaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattagggatatt 25413746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 40808866 - 40808930
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    ||||||||||||| |||| | |||||||||||| | |||||||||||||||||||||||||||||    
T  40808866 gaaaatgttacatcaacaccatttattcctacaccccattgtacaccccatgtattagggatatt 40808930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 47191124 - 47191061
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||| ||||||    
T  47191124 gaaaatgttacatgaacaccctttattcctacacctcattgtaca-cccatgtattagagatatt 47191061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 53273783 - 53273719
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||| ||||||||| |||||||||| | ||||||||||| |||||||||||||||||||    
T  53273783 gaaaatgttatatgaacatcatttattcctatacctcattgtacatcccatgtattagggatatt 53273719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 54246247 - 54246183
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| |||||||||||||| | |||||||||||| ||||||||| ||||||    
T  54246247 gaaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagagatatt 54246183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 24688501 - 24688437
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| |||||||| |||||   |||||||||||| ||||||||||||||||    
T  24688501 gaaaatgttacatgaacaccctttatttctacactccattgtacaccctatgtattagggatatt 24688437  T

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Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Original strand, 1078229 - 1078286
Alignment:
Q  343 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagg 400  Q
    ||||||||||||||||| ||||||||||| || |||||||||||||  ||||||||||    
T  1078229 aaaatgttacatgaacaccctttattcctgcacctcattgtacacctaatgtattagg 1078286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 25996269 - 25996325
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtatta 398  Q
    |||||||||||||||||| |||||| || ||||||| |||||||||||||| |||||    
T  25996269 gaaaatgttacatgaacaccctttaatcatacatcttattgtacaccccatatatta 25996325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 345 - 405
Target Start/End: Complemental strand, 29558330 - 29558270
Alignment:
Q  345 aatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatat 405  Q
    ||||||| ||||||| ||||||||| ||||||||||||||||||| || ||||||| ||||    
T  29558330 aatgttatatgaacaccctttattcatacatctcattgtacaccctatatattaggaatat 29558270  T

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Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 406
Target Start/End: Original strand, 27748565 - 27748628
Alignment:
Q  343 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    ||||||||||||||||| | ||||||| |||| |||||| ||||||  ||||||||||||||||    
T  27748565 aaaatgttacatgaacaccttttattcatacacctcattatacaccttatgtattagggatatt 27748628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 341 - 406
Target Start/End: Original strand, 40480749 - 40480814
Alignment:
Q  341 agaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    ||||||||||||||||||| ||||||||| ||   | ||||||||| || ||||||||||||||||    
T  40480749 agaaaatgttacatgaacaccctttattcatatgccccattgtacatcctatgtattagggatatt 40480814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 36150131 - 36150195
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||| | ||||||||| |||| | |||| ||||||| |||||| |||||||||    
T  36150131 gaaaatgttacatgaataccctttattcatacaccccattatacaccctatgtatcagggatatt 36150195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 406
Target Start/End: Complemental strand, 53581956 - 53581893
Alignment:
Q  343 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||  |||||||| ||||   ||||||||| || ||||||||||||||||    
T  53581956 aaaatgttacatgaacactctttattcatacactccattgtacatcctatgtattagggatatt 53581893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 9434125 - 9434185
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctaca-tctcattgtacaccccatgtattaggga 402  Q
    |||||||||||||||||| |||||| || |||| ||| ||||||||||||||| ||||||||    
T  9434125 gaaaatgttacatgaacaccctttaatcatacactct-attgtacaccccatgcattaggga 9434185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 4190364 - 4190300
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| |||||| || |||| |  ||||||||||  ||||||||| ||||||    
T  4190364 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccttatgtattagagatatt 4190300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 10457991 - 10457927
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| | |||| || |||| |  ||||||||||||||| |||| |||||||    
T  10457991 gaaaatgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatatt 10457927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 57; Significance: 1e-23; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 43571185 - 43571121
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  43571185 gaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatatt 43571121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 5489777 - 5489841
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||    
T  5489777 gaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatatt 5489841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 37814779 - 37814843
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||| |||||||    
T  37814779 gaaaatgttacataaacaccctttattcatacatctcattgtacaccccatgtattaaggatatt 37814843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 343 - 398
Target Start/End: Original strand, 7447828 - 7447882
Alignment:
Q  343 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtatta 398  Q
    |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  7447828 aaaatgttacatgaacatcctttattcctacatcccattgtaca-cccatgtatta 7447882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 750404 - 750340
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    ||||||||||| |||||| ||||  |||||||| | ||||||||||||||||||| |||||||||    
T  750404 gaaaatgttacgtgaacacccttatttcctacaccccattgtacaccccatgtatcagggatatt 750340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 343 - 406
Target Start/End: Original strand, 4401329 - 4401393
Alignment:
Q  343 aaaatgttacatgaaca-tcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||| |||||||||| || ||||||||||||  ||||||||||||||||||||||| ||||||    
T  4401329 aaaatgatacatgaacactcttttattcctacacttcattgtacaccccatgtattagagatatt 4401393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 24769598 - 24769534
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    ||||||||| |||||||| | |||||| |||||   |||||||||||||||||||||||||||||    
T  24769598 gaaaatgtttcatgaacaccttttatttctacactccattgtacaccccatgtattagggatatt 24769534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 48499061 - 48498997
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    ||||||||||||||||||  ||||||| |||||   ||||||||||| |||||||||||||||||    
T  48499061 gaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatatt 48498997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 38335919 - 38335983
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| |||||| || |||| || |||||||| |||||| |||| |||||||    
T  38335919 gaaaatgttacatgaacaccctttaatcatacaccttattgtacatcccatgcattaaggatatt 38335983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 44112678 - 44112738
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattaggga 402  Q
    |||||||||||||||||| |||||| || |||| |  ||||||||||||||| ||||||||    
T  44112678 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaggga 44112738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 48119629 - 48119693
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| |||||| || |||| |  ||||||||||||||| |||| |||||||    
T  48119629 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatatt 48119693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 50448359 - 50448295
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    ||||||||||||||||||  ||||||| |||||   |||||||||||  ||||||||||||||||    
T  50448359 gaaaatgttacatgaacactctttatttctacactccattgtacaccttatgtattagggatatt 50448295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 406
Target Start/End: Complemental strand, 2497660 - 2497597
Alignment:
Q  343 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||| |||| | ||||||| |||||  ||||||||||||||| ||||| |||||||    
T  2497660 aaaatgttacataaacaccatttattcatacattccattgtacaccccatatattaaggatatt 2497597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 35003295 - 35003359
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| |||||| || |||| |  ||||||||||||||  |||| |||||||    
T  35003295 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatacattaaggatatt 35003359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 45639831 - 45639767
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    ||||||||||||||||||  ||||| || ||||||  ||||||||||||||  |||| |||||||    
T  45639831 gaaaatgttacatgaacactctttaatcatacatcctattgtacaccccatacattaaggatatt 45639767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 46168384 - 46168448
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| |||||| || || |||  ||||||||||| ||| |||| |||||||    
T  46168384 gaaaatgttacatgaacaccctttaatcatatatcctattgtacacccaatgcattaaggatatt 46168448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 686 - 750
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||    
T  686 gaaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatatt 750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 3e-21; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 11582767 - 11582831
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||    
T  11582767 gaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatatt 11582831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 36743582 - 36743518
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||    
T  36743582 gaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatatt 36743518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 343 - 406
Target Start/End: Original strand, 42295197 - 42295260
Alignment:
Q  343 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    ||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||    
T  42295197 aaaatgttacatgaacaccctttattcctacacctcattgtacactccatgtattagggatatt 42295260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 29705363 - 29705427
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| |||||||| ||||| | |||||||||||||||||||||||||||||    
T  29705363 gaaaatgttacatgaacaccctttatttctacaccccattgtacaccccatgtattagggatatt 29705427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 30660841 - 30660777
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| |||||||| ||||||| |||||||||||| ||||||||||||||||    
T  30660841 gaaaatgttacatgaacaccctttatttctacatcccattgtacaccctatgtattagggatatt 30660777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 5754904 - 5754968
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| | |||||||||||||| ||||||||| ||||| |||||||||||||    
T  5754904 gaaaatgttacatgaacaccttttattcctacatcccattgtacatcccatatattagggatatt 5754968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 343 - 406
Target Start/End: Complemental strand, 29801048 - 29800985
Alignment:
Q  343 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||| |||| | ||||||| |||||| |||||||||||||||||||||||||||||    
T  29801048 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatatt 29800985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 341 - 406
Target Start/End: Original strand, 45397316 - 45397381
Alignment:
Q  341 agaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||| |||||| |||||||||||||| | |||| ||||||| ||||||||||||||||    
T  45397316 agaaaatgttacgtgaacaccctttattcctacaccccattctacaccctatgtattagggatatt 45397381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 343 - 406
Target Start/End: Original strand, 20148762 - 20148825
Alignment:
Q  343 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||| |||| ||||||||| |||||| ||||||||||| ||| |||||||||||||    
T  20148762 aaaatgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatatt 20148825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 343 - 406
Target Start/End: Original strand, 26125637 - 26125700
Alignment:
Q  343 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||| |||| ||||||||| |||||  |||||||||||| ||||||||||||||||    
T  26125637 aaaatgttacataaacaccctttattcatacattccattgtacaccctatgtattagggatatt 26125700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 343 - 406
Target Start/End: Complemental strand, 30912660 - 30912597
Alignment:
Q  343 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    ||||||||||||||||| |||||||||||||| | ||||||||||  |||||||||||| ||||    
T  30912660 aaaatgttacatgaacaccctttattcctacaccccattgtacacttcatgtattaggggtatt 30912597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 343 - 406
Target Start/End: Original strand, 42699259 - 42699322
Alignment:
Q  343 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    ||||||||||||||||| |||||||||||||| | |||||||||||  |||||||| |||||||    
T  42699259 aaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattatggatatt 42699322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 2166062 - 2165998
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||| ||||||||||| | |||||||||||| | ||||||| |||||||||||||| ||||||    
T  2166062 gaaaatattacatgaacaccatttattcctacaccccattgtataccccatgtattagagatatt 2165998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 2546997 - 2547061
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    ||||||||||||||||||  ||||||| |||||   ||||||||||| |||||||||||||||||    
T  2546997 gaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatatt 2547061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 18066817 - 18066753
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| |||||| || |||||   |||||||| |||||||||||||||||||    
T  18066817 gaaaatgttacatgaacaccctttaatcatacattctattgtacatcccatgtattagggatatt 18066753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 34304789 - 34304849
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattaggga 402  Q
    ||||||||||||||||||||||||| || |||| |  ||||||||||||||| ||||||||    
T  34304789 gaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaggga 34304849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 42197534 - 42197470
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| | |||||||||||| | ||||| |||| | ||||||||||||||||    
T  42197534 gaaaatgttacatgaacaccatttattcctacaccccattgcacacactatgtattagggatatt 42197470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 349 - 406
Target Start/End: Original strand, 31384672 - 31384729
Alignment:
Q  349 ttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    ||||||||||| ||||||||| |||||   |||||||||||||||||||||| |||||    
T  31384672 ttacatgaacaccctttattcttacattctattgtacaccccatgtattaggaatatt 31384729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 1375543 - 1375607
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||| ||||||||||| | ||||||| |||| |  |||||||||||||| |||||||||||||    
T  1375543 gaaaattttacatgaacaccttttattcatacacccaattgtacaccccatatattagggatatt 1375607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 35181517 - 35181577
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattaggga 402  Q
    |||||||||||||||||| |||||| || |||| |  ||||||||||||||| ||||||||    
T  35181517 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaggga 35181577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 402
Target Start/End: Complemental strand, 33630091 - 33630032
Alignment:
Q  343 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattaggga 402  Q
    ||||||||||| ||||| |||||| || |||| |||||||||||||| ||| ||||||||    
T  33630091 aaaatgttacacgaacaccctttaatcatacacctcattgtacaccctatgcattaggga 33630032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 374
Target Start/End: Original strand, 9241565 - 9241597
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctaca 374  Q
    ||||||||||||||||| |||||||||||||||    
T  9241565 gaaaatgttacatgaacctcctttattcctaca 9241597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 374
Target Start/End: Original strand, 28977147 - 28977179
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctaca 374  Q
    |||||||||||||||||| ||||||||||||||    
T  28977147 gaaaatgttacatgaacaccctttattcctaca 28977179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 3e-21; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 24001111 - 24001047
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||    
T  24001111 gaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatatt 24001047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 42538530 - 42538466
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||    
T  42538530 gaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatatt 42538466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 35069722 - 35069786
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||| |||||||||||||||||    
T  35069722 gaaaatgttacatgaacactctttattcctacacctcattgtacacctcatgtattagggatatt 35069786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 42972853 - 42972917
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    ||||||||||| |||||||||||||||||||||   ||||||||||| |||||||||||||||||    
T  42972853 gaaaatgttacctgaacatcctttattcctacactccattgtacacctcatgtattagggatatt 42972917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 343 - 406
Target Start/End: Complemental strand, 43343722 - 43343659
Alignment:
Q  343 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    ||||||||||||||||||| |||||| ||||| |  ||||||||||||||||||||||||||||    
T  43343722 aaaatgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatatt 43343659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 343 - 406
Target Start/End: Complemental strand, 44417032 - 44416969
Alignment:
Q  343 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    ||||||||||||||||||| |||||| ||||| |  ||||||||||||||||||||||||||||    
T  44417032 aaaatgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatatt 44416969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 5811023 - 5810959
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    ||||||||||||||| || |||||||||||||| | |||||||||||| || |||||||||||||    
T  5811023 gaaaatgttacatgaccaccctttattcctacaccccattgtacaccctatatattagggatatt 5810959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 343 - 406
Target Start/End: Original strand, 10573751 - 10573814
Alignment:
Q  343 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||| |||| ||||||||| ||||||  |||||||||||||||||||||| |||||    
T  10573751 aaaatgttacataaacaccctttattcatacatcctattgtacaccccatgtattaggaatatt 10573814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 343 - 406
Target Start/End: Original strand, 44326180 - 44326243
Alignment:
Q  343 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||| |||| ||||||||| |||||| ||||||||||| ||| |||||||||||||    
T  44326180 aaaatgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatatt 44326243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 5015396 - 5015460
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    ||||||||||||||||||  ||||||| |||||   ||||||||||| |||||||||||||||||    
T  5015396 gaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatatt 5015460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 5194330 - 5194266
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| | ||||||| |||| |||||||||||||| |||| ||| |||||||    
T  5194330 gaaaatgttacatgaacaccatttattcatacacctcattgtacaccctatgttttaaggatatt 5194266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 39998409 - 39998473
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    ||||||||||||||||||   |||| || ||||||  ||||||||||||||||||||||||||||    
T  39998409 gaaaatgttacatgaacacattttaatcatacatcctattgtacaccccatgtattagggatatt 39998473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 40236920 - 40236980
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattaggga 402  Q
    |||||||||||||||||| |||||| || ||||||  ||||||||||||||| ||||||||    
T  40236920 gaaaatgttacatgaacaccctttaatcatacatcctattgtacaccccatgcattaggga 40236980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 45326021 - 45326085
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||| |||||||| |||| | ||||||| |||||| ||||||||||||||| |||||||||||||    
T  45326021 gaaagtgttacataaacaccttttattcatacatcacattgtacaccccatatattagggatatt 45326085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 363 - 406
Target Start/End: Complemental strand, 32029895 - 32029852
Alignment:
Q  363 tttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||| | |||||||||||||||||||||||||||||    
T  32029895 tttattcctacaccccattgtacaccccatgtattagggatatt 32029852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 9216303 - 9216366
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| |||||||||||| |||  |||||||| |||||| ||||| ||||||    
T  9216303 gaaaatgttacatgaacaccctttattcctatatcctattgtaca-cccatgcattagagatatt 9216366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 43317444 - 43317508
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| | ||||||| |||| ||||||||||| || |||  |||||||||||    
T  43317444 gaaaatgttacatgaacaccatttattcatacacctcattgtacatcctatgctttagggatatt 43317508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 344 - 406
Target Start/End: Complemental strand, 26898499 - 26898437
Alignment:
Q  344 aaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||| | ||||||| |||| |  ||||||||  ||||||||||||||||||    
T  26898499 aaatgttacatgaacaccttttattcatacacccaattgtacattccatgtattagggatatt 26898437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 376
Target Start/End: Complemental strand, 38160693 - 38160659
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatc 376  Q
    |||||||||||||||||| ||||||||||||||||    
T  38160693 gaaaatgttacatgaacaccctttattcctacatc 38160659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 361 - 406
Target Start/End: Complemental strand, 27393340 - 27393295
Alignment:
Q  361 cctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    ||||||||||||||||  ||||||||| | ||||||||||||||||    
T  27393340 cctttattcctacatcctattgtacactctatgtattagggatatt 27393295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 357 - 406
Target Start/End: Complemental strand, 38160663 - 38160614
Alignment:
Q  357 acatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||| |||||| ||||   |||||||||||||||||||||||||||||    
T  38160663 acatcccttattcttacactccattgtacaccccatgtattagggatatt 38160614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 343 - 406
Target Start/End: Complemental strand, 4638297 - 4638234
Alignment:
Q  343 aaaatgttacatgaacatcctttattcctacatctca-ttgtacaccccatgtattagggatatt 406  Q
    ||||||||||||||||| | ||||||| |||| |||| ||||||||||||| ||||| |||||||    
T  4638297 aaaatgttacatgaacaccttttattcataca-ctcaattgtacaccccatatattatggatatt 4638234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 41861675 - 41861731
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtatta 398  Q
    |||||||||||||||||| ||||||||| |||| |  ||| ||||||| ||||||||    
T  41861675 gaaaatgttacatgaacaccctttattcatacacccaattatacaccctatgtatta 41861731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 394
Target Start/End: Complemental strand, 47279796 - 47279744
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgt 394  Q
    |||||| |||||| || | ||||||||| |||||| |||||||||||||||||    
T  47279796 gaaaatattacataaataccctttattcatacatcccattgtacaccccatgt 47279744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 3e-21; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 9698432 - 9698368
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||    
T  9698432 gaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatatt 9698368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 26670108 - 26670044
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||    
T  26670108 gaaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatatt 26670044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 3213401 - 3213465
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    ||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||| |||||||    
T  3213401 gaaaatgttacataaacaccctttattcatacatctcattgtacaccccatgtattaaggatatt 3213465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 7273434 - 7273370
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| |||||||||||||| || ||||||||||||||||||||| ||||||    
T  7273434 gaaaatgttacatgaacaccctttattcctacaccttattgtacaccccatgtattagagatatt 7273370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 7367550 - 7367614
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||| ||||||||| ||||||| |||| ||||||||||| |||||||||||||||||||    
T  7367550 gaaaatgttatatgaacatcatttattcatacacctcattgtacatcccatgtattagggatatt 7367614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 13743320 - 13743256
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| | ||||||| ||||||  ||||||||||||||||||||||||||||    
T  13743320 gaaaatgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatatt 13743256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 13748820 - 13748756
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| | ||||||| ||||||  ||||||||||||||||||||||||||||    
T  13748820 gaaaatgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatatt 13748756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 30014344 - 30014408
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| |||||||||||||||| |||| |||| ||||||||||||| |||||    
T  30014344 gaaaatgttacatgaacaccctttattcctacatcccattatacatcccatgtattaggcatatt 30014408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 21279930 - 21279994
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| |||||||| ||||||  ||||| ||| |||||||||||||||||||    
T  21279930 gaaaatgttacatgaacaccctttatttctacattccattgcacatcccatgtattagggatatt 21279994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 21293776 - 21293712
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    ||||||||||||| |||| ||||||||| ||||| ||| |||||||||||||||||| |||||||    
T  21293776 gaaaatgttacataaacaccctttattcatacatttcactgtacaccccatgtattaaggatatt 21293712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 26466800 - 26466864
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    ||||||||||||| |||| |||||||||||||| | |||||||||| ||||||||||||| ||||    
T  26466800 gaaaatgttacataaacaccctttattcctacaccccattgtacactccatgtattagggttatt 26466864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 343 - 406
Target Start/End: Complemental strand, 24204085 - 24204022
Alignment:
Q  343 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    ||||||||||||||||| | |||||||||||| |  ||||||||| ||||||||||||||||||    
T  24204085 aaaatgttacatgaacaccatttattcctacaccctattgtacactccatgtattagggatatt 24204022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 7292748 - 7292812
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||| ||||| | ||||||| |||| |||||| ||||||| ||||||||||||||||    
T  7292748 gaaaatgttacaagaacaccatttattcatacacctcattatacaccctatgtattagggatatt 7292812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 31109321 - 31109257
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| |||||| || |||||| |||| ||||||||||| | ||||||||||    
T  31109321 gaaaatgttacatgaacaccctttaatcatacatcccattatacaccccatgcactagggatatt 31109257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 406
Target Start/End: Original strand, 30735984 - 30736047
Alignment:
Q  343 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||   |||||||||||| | ||||||||||| |||||||||| ||||||    
T  30735984 aaaatgttacatgaacactttttattcctacaccccattgtacacctcatgtattagtgatatt 30736047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 33242404 - 33242460
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtatta 398  Q
    |||||||||||||||||| | |||| || |||| || ||||||||||||||||||||    
T  33242404 gaaaatgttacatgaacaccatttaatcatacaccttattgtacaccccatgtatta 33242460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 3e-21; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 2614748 - 2614684
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||    
T  2614748 gaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatatt 2614684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 33801470 - 33801534
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    ||||||||||||||||||||||||||| ||||| | |||||||||| ||||||||||||||||||    
T  33801470 gaaaatgttacatgaacatcctttatttctacaccccattgtacactccatgtattagggatatt 33801534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 342 - 400
Target Start/End: Complemental strand, 33855142 - 33855084
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagg 400  Q
    |||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||    
T  33855142 gaaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattagg 33855084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 18033983 - 18034047
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| ||||||||||||||   |||||||||||| ||||||||||||||||    
T  18033983 gaaaatgttacatgaacaccctttattcctacactccattgtacaccctatgtattagggatatt 18034047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 22512306 - 22512370
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| ||||||||||||||   |||||||||| ||||||||||||||||||    
T  22512306 gaaaatgttacatgaacaccctttattcctacactccattgtacactccatgtattagggatatt 22512370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 343 - 399
Target Start/End: Complemental strand, 25915085 - 25915029
Alignment:
Q  343 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattag 399  Q
    ||||||||||||||||| |||||||||||||| |||||||||||||| |||||||||    
T  25915085 aaaatgttacatgaacaccctttattcctacacctcattgtacacccaatgtattag 25915029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 41334762 - 41334698
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| ||||||||| |||| |||||| ||||||| ||||||||||||||||    
T  41334762 gaaaatgttacatgaacaccctttattcatacacctcattatacaccctatgtattagggatatt 41334698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 343 - 406
Target Start/End: Original strand, 5256997 - 5257060
Alignment:
Q  343 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||| |||| | ||||||| |||||| |||||||||||||||||||||||||||||    
T  5256997 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatatt 5257060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 7617134 - 7617198
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| ||||||||| ||||   |||| ||||||||||||||||||||||||    
T  7617134 gaaaatgttacatgaacaccctttattcatacactccattatacaccccatgtattagggatatt 7617198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 38470580 - 38470644
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    ||||||||||||| |||| ||||||||| |||||  ||||||||||||||||||||| |||||||    
T  38470580 gaaaatgttacataaacaccctttattcatacattccattgtacaccccatgtattaaggatatt 38470644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 32473493 - 32473429
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| |||||| || |||| || |||||||||| |||| ||||||||||||    
T  32473493 gaaaatgttacatgaacaccctttaatcatacaccttattgtacaccacatgcattagggatatt 32473429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 3e-21; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 33703142 - 33703206
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||    
T  33703142 gaaaatgttacatgaacaccctttatttctacatcttattgtacaccccatgtattagggatatt 33703206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 1771365 - 1771301
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| |||||||||||||| | |||||||||||||||||||||| ||||||    
T  1771365 gaaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattagagatatt 1771301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 35017734 - 35017797
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||    
T  35017734 gaaaatgttacatgaacaccctttattcctatatctcattgtacaccccatgta-tagggatatt 35017797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 27864565 - 27864629
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    ||||||||||||| |||| | ||||||| |||||| |||||||||||||||||||||||||||||    
T  27864565 gaaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatatt 27864629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 55966445 - 55966381
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    ||||||||||||| |||| ||||||||| |||||| ||||||||| |||||||||||||||||||    
T  55966445 gaaaatgttacataaacaccctttattcatacatcccattgtacatcccatgtattagggatatt 55966381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 343 - 406
Target Start/End: Complemental strand, 27893940 - 27893877
Alignment:
Q  343 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||| |||| | ||||||| |||||| |||||||||||||||||||||||||||||    
T  27893940 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatatt 27893877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 343 - 406
Target Start/End: Original strand, 43735744 - 43735807
Alignment:
Q  343 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||  ||||||||||| ||||||    
T  43735744 aaaatattacatgaacatcctttattcctacatctcattatacattccatgtattagagatatt 43735807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 344 - 406
Target Start/End: Complemental strand, 23204875 - 23204813
Alignment:
Q  344 aaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    ||||||||||||||||  ||||||||||||||| ||||||||| || ||||||||||||||||    
T  23204875 aaatgttacatgaacactctttattcctacatcccattgtacatcctatgtattagggatatt 23204813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 23035981 - 23036045
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    ||||||||||||||||| ||||||||||||||| |  ||||||||||| || |||||||||||||    
T  23035981 gaaaatgttacatgaacctcctttattcctacaccctattgtacaccctatatattagggatatt 23036045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 25051694 - 25051758
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||| |||||||||  ||||||||||||| | |||||||||||| ||||||||||||||||    
T  25051694 gaaaatgtcacatgaacacactttattcctacaccccattgtacaccctatgtattagggatatt 25051758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 27316812 - 27316748
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||| | ||||| |||||||||||||| |||||| |||||||||||||||| |||||||    
T  27316812 gaaaatgttaaacgaacaccctttattcctacacctcattatacaccccatgtattaaggatatt 27316748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 27550310 - 27550374
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| |||||||| |||||   ||||||||||| |||||||||||||||||    
T  27550310 gaaaatgttacatgaacaccctttatttctacactccattgtacacctcatgtattagggatatt 27550374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 28988474 - 28988534
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattaggga 402  Q
    |||||||||||||||||| ||||||||| |||| |||||||||||||||||| | ||||||    
T  28988474 gaaaatgttacatgaacaccctttattcatacacctcattgtacaccccatgcactaggga 28988534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 343 - 406
Target Start/End: Complemental strand, 43949900 - 43949836
Alignment:
Q  343 aaaatgttacatgaacatccttt-attcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||| |||||||||| ||||| |||||| || |||||||||||||||||||||||||||||||    
T  43949900 aaaatgatacatgaacacccttttattcctgcacctcattgtacaccccatgtattagggatatt 43949836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 48463549 - 48463485
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    ||||||||||||| |||| | ||||||| ||||| |||||||||| |||||||||||||||||||    
T  48463549 gaaaatgttacataaacaccatttattcatacatttcattgtacatcccatgtattagggatatt 48463485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 12496957 - 12497021
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||| ||||||| ||||||||||||||   ||||||||| |||||||||||| ||||||    
T  12496957 gaaaatgttatatgaacaccctttattcctacactccattgtacatcccatgtattagagatatt 12497021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 28982921 - 28982857
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| |||||||| ||||| |  |||||||| ||||| |||||||||||||    
T  28982921 gaaaatgttacatgaacaccctttatttctacaccctattgtacatcccatatattagggatatt 28982857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 343 - 406
Target Start/End: Original strand, 39631102 - 39631166
Alignment:
Q  343 aaaatgttacatgaacatccttt-attcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||| |||||||||  ||||| ||||||||| ||||||||||||| |||||||||||||||||    
T  39631102 aaaatgatacatgaacccccttttattcctacacctcattgtacacctcatgtattagggatatt 39631166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 41878407 - 41878471
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    ||||||||||||||||||  |||||||| |||| |||||||||||||| ||  ||||||||||||    
T  41878407 gaaaatgttacatgaacactctttattcatacacctcattgtacaccctatccattagggatatt 41878471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 343 - 406
Target Start/End: Complemental strand, 43514784 - 43514721
Alignment:
Q  343 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    ||||||||||||||||| ||||||||||||||   ||||||||||  |||||||||||| ||||    
T  43514784 aaaatgttacatgaacaccctttattcctacactccattgtacacttcatgtattagggttatt 43514721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 342 - 399
Target Start/End: Original strand, 41847972 - 41848029
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattag 399  Q
    |||||||||||| ||||||||||| |||  ||| |||||||||||||||||| |||||    
T  41847972 gaaaatgttacaagaacatccttttttcacacacctcattgtacaccccatgcattag 41848029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 55272475 - 55272411
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctaca-tctcattgtacaccccatgtattagggatatt 406  Q
    ||||||||||||||||||||||||| || |||| ||| ||||||||||||||| |||| |||||||    
T  55272475 gaaaatgttacatgaacatcctttaatcatacactct-attgtacaccccatgcattaaggatatt 55272411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 398
Target Start/End: Original strand, 32728358 - 32728414
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtatta 398  Q
    ||||||||||||||||||||||||| || |||| |  ||||||||||||||| ||||    
T  32728358 gaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcatta 32728414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 406
Target Start/End: Complemental strand, 3756344 - 3756281
Alignment:
Q  343 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    ||||||||||||||||| |||||| || |||| |  ||||||||||||||| |||| |||||||    
T  3756344 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatatt 3756281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 404
Target Start/End: Complemental strand, 45490412 - 45490350
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggata 404  Q
    ||||||||||||||||||   ||||||  ||||||  |||||||||| |||||||||||||||    
T  45490412 gaaaatgttacatgaacacattttatttatacatccaattgtacacctcatgtattagggata 45490350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 711961 - 712025
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| |||||| || |||| |  ||||||||||| ||| |||| |||||||    
T  711961 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccctatgcattaaggatatt 712025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 17619251 - 17619187
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| | |||| || |||| |  ||||||||||||||| |||| |||||||    
T  17619251 gaaaatgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatatt 17619187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 3e-21; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 30838633 - 30838697
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||    
T  30838633 gaaaatgttacatgaacaccctttatttctacatcttattgtacaccccatgtattagggatatt 30838697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 341 - 406
Target Start/End: Original strand, 19047157 - 19047222
Alignment:
Q  341 agaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    ||||||||||||||||||| |||||||||||||||  |||||||||||| ||||||||||||||||    
T  19047157 agaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatatt 19047222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 1750415 - 1750479
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| |||||||||||||| | |||||||||||| ||||||||||||||||    
T  1750415 gaaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagggatatt 1750479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 16096748 - 16096812
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| |||||||||||||| | |||| ||||||||||||||||||||||||    
T  16096748 gaaaatgttacatgaacaccctttattcctacaccccattatacaccccatgtattagggatatt 16096812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 43335862 - 43335798
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||| ||||||||| |||||||||||| ||||||||||| |||||||||||||||||||    
T  43335862 gaaaatgttatatgaacatcatttattcctacacctcattgtacatcccatgtattagggatatt 43335798  T

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Target: chr2; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 343 - 406
Target Start/End: Complemental strand, 43490499 - 43490436
Alignment:
Q  343 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    ||||||||||||||||| |||||||||||||||| |||||||||| | ||||||||||||||||    
T  43490499 aaaatgttacatgaacaccctttattcctacatcccattgtacactctatgtattagggatatt 43490436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 12302352 - 12302288
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| |||||||| ||||| | |||||||||||| ||||||||||||||||    
T  12302352 gaaaatgttacatgaacaccctttatttctacaccccattgtacaccctatgtattagggatatt 12302288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 343 - 406
Target Start/End: Original strand, 33229303 - 33229367
Alignment:
Q  343 aaaatgttacatgaacatccttt-attcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||| |||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  33229303 aaaatgatacatgaacacccttttattcctacacctcattgtacaccccatgtattagggatatt 33229367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 340 - 393
Target Start/End: Complemental strand, 34817877 - 34817824
Alignment:
Q  340 gagaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatg 393  Q
    |||||||||||||||||||| |||||||||  ||| ||||||||||||||||||    
T  34817877 gagaaaatgttacatgaacaccctttattcacacacctcattgtacaccccatg 34817824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 12415559 - 12415499
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattaggga 402  Q
    |||||||||||||||||| |||||| || |||| || ||||||||||||||| ||||||||    
T  12415559 gaaaatgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattaggga 12415499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 402
Target Start/End: Complemental strand, 12427619 - 12427559
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattaggga 402  Q
    |||||||||||||||||| |||||| || |||| || ||||||||||||||| ||||||||    
T  12427619 gaaaatgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattaggga 12427559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 4764825 - 4764769
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtatta 398  Q
    ||||||||||||| |||| | |||||||||||| |  ||||||||||||||||||||    
T  4764825 gaaaatgttacatcaacaccatttattcctacaccctattgtacaccccatgtatta 4764769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 43114558 - 43114618
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattaggga 402  Q
    |||||||||||||||||| |||||| || |||| |  ||||||||||||||| ||||||||    
T  43114558 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaggga 43114618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 402
Target Start/End: Complemental strand, 11825752 - 11825693
Alignment:
Q  343 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattaggga 402  Q
    ||||||||||||||||| |||||| || |||| |  ||||||||||||||| ||||||||    
T  11825752 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaggga 11825693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 343 - 402
Target Start/End: Complemental strand, 41282072 - 41282013
Alignment:
Q  343 aaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattaggga 402  Q
    ||||||||||||||||| |||||| || |||| |  ||||||||||||||| ||||||||    
T  41282072 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaggga 41282013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 343 - 384
Target Start/End: Original strand, 7070418 - 7070459
Alignment:
Q  343 aaaatgttacatgaacatcctttattcctacatctcattgta 384  Q
    ||||||||||||||||| ||||||||| |||||| |||||||    
T  7070418 aaaatgttacatgaacaccctttattcatacatcccattgta 7070459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 398
Target Start/End: Complemental strand, 966933 - 966877
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtatta 398  Q
    |||||||||||||||||| |||||| || |||| |  ||||||||||||||| ||||    
T  966933 gaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcatta 966877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 13780834 - 13780770
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    ||||||||||||| ||||   |||||||  ||| |||||||||||||||||  ||||||||||||    
T  13780834 gaaaatgttacatcaacacattttattcacacacctcattgtacaccccatacattagggatatt 13780770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 16803969 - 16804029
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattaggga 402  Q
    |||||||||||||||||| |||||| || |||| |  |||||||| |||||| ||||||||    
T  16803969 gaaaatgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattaggga 16804029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 402
Target Start/End: Original strand, 16843251 - 16843311
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattaggga 402  Q
    |||||||||||||||||| |||||| || |||| |  |||||||| |||||| ||||||||    
T  16843251 gaaaatgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattaggga 16843311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 374
Target Start/End: Complemental strand, 42849945 - 42849913
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctaca 374  Q
    |||||||||||||||||| ||||||||||||||    
T  42849945 gaaaatgttacatgaacaccctttattcctaca 42849913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 341 - 406
Target Start/End: Original strand, 112655 - 112720
Alignment:
Q  341 agaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    ||||||||||||||||||| |||||||||||||||  |||||||||||| ||||||||||||||||    
T  112655 agaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatatt 112720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 14287 - 14223
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| |||||||| ||||| | ||||||||| || ||||||||||||||||    
T  14287 gaaaatgttacatgaacaccctttatttctacaccccattgtacatcctatgtattagggatatt 14223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 24615 - 24551
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||||||||||| |||||||| ||||| | ||||||||| || ||||||||||||||||    
T  24615 gaaaatgttacatgaacaccctttatttctacaccccattgtacatcctatgtattagggatatt 24551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 406
Target Start/End: Original strand, 11252 - 11316
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||| |||||||||  |||||||| |||| | ||||||||||||||| |||||||||||||    
T  11252 gaaaatgtcacatgaacacactttattcatacaccccattgtacaccccatatattagggatatt 11316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 406
Target Start/End: Complemental strand, 23520 - 23456
Alignment:
Q  342 gaaaatgttacatgaacatcctttattcctacatctcattgtacaccccatgtattagggatatt 406  Q
    |||||||||| ||||||| ||||||||||||||   ||||||||| |||||||||||| ||||||    
T  23520 gaaaatgttatatgaacaccctttattcctacactccattgtacatcccatgtattagagatatt 23456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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