View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10152_6 (Length: 390)
Name: NF10152_6
Description: NF10152
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10152_6 |
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Alignment Details
Target: chr2 (Bit Score: 332; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 17 - 383
Target Start/End: Original strand, 27671809 - 27672176
Alignment:
| Q |
17 |
atgcaaaacttgaaatgatttttctgaaatagtagtcaacaaacattttctatggttccacctgggattcagctctcttaaatctgggattgagacctaa |
116 |
Q |
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| T |
27671809 |
atgcaaaacttgaaatgatttttctgaaatagtagtcaacaaacattttctattgttccacctgggattcagctctcttaaatctgggattgagacctaa |
27671908 |
T |
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| Q |
117 |
tataggtaaaattgaagaagagtctcgcataataaaaacattaacaaaagactttt-ttacaatctcgtgtaggaacgacacacatgggacggggcaatt |
215 |
Q |
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| T |
27671909 |
tataggtaaaattgaagaagagtctcgcataataaaaacactaacaaaagactttttttacaatctcgtgtaggaacggaacacatgggacggggcaatt |
27672008 |
T |
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| Q |
216 |
cagcgtgctagtgtgattgcattaccattaattactgcaagaaaactacaaattatgagaaaaatggtgaactgttaaatccaaaatcaatttaattgtt |
315 |
Q |
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| T |
27672009 |
cagcgtgctagtgtgattgcattaccattaattactgcaagaaaactacaaattatgagaaaaatggtgaactgttaaatccaaaatcaatttaattgtt |
27672108 |
T |
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| Q |
316 |
tcatttaatcaattaataaagaatatatatgtaaaatatttttacaaaggaccttatagcctttgcta |
383 |
Q |
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| T |
27672109 |
tcatttaatcaattaataaagaatatatacctaaaatatttttacaaaggaccttatagcttttgcta |
27672176 |
T |
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