View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10153_high_13 (Length: 289)

Name: NF10153_high_13
Description: NF10153
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10153_high_13
NF10153_high_13
[»] chr8 (13 HSPs)
chr8 (35-272)||(23540711-23540960)
chr8 (35-272)||(22485739-22485988)
chr8 (35-273)||(45136717-45136966)
chr8 (35-272)||(27924757-27925006)
chr8 (44-270)||(33962348-33962586)
chr8 (44-270)||(33977674-33977912)
chr8 (41-266)||(26536898-26537136)
chr8 (100-176)||(22476808-22476884)
chr8 (185-237)||(18622429-18622481)
chr8 (185-260)||(20254194-20254268)
chr8 (1-38)||(37128275-37128312)
chr8 (236-272)||(22476893-22476929)
chr8 (2-38)||(39067477-39067513)
[»] scaffold0129 (1 HSPs)
scaffold0129 (35-272)||(16111-16360)
[»] chr3 (31 HSPs)
chr3 (35-272)||(17135449-17135698)
chr3 (35-272)||(18482677-18482926)
chr3 (36-272)||(13791284-13791532)
chr3 (35-272)||(24196131-24196380)
chr3 (35-272)||(23953862-23954111)
chr3 (35-272)||(13514922-13515172)
chr3 (35-272)||(7028375-7028624)
chr3 (35-168)||(15572423-15572556)
chr3 (35-156)||(18548254-18548375)
chr3 (37-176)||(19634488-19634625)
chr3 (37-272)||(1918548-1918795)
chr3 (41-270)||(18063513-18063754)
chr3 (76-270)||(28051789-28051991)
chr3 (41-176)||(296053-296188)
chr3 (181-272)||(20626947-20627038)
chr3 (181-270)||(21547547-21547636)
chr3 (51-145)||(21253440-21253534)
chr3 (182-260)||(286217-286294)
chr3 (181-254)||(6578872-6578944)
chr3 (36-84)||(44453089-44453137)
chr3 (185-235)||(979722-979772)
chr3 (185-235)||(3551820-3551870)
chr3 (129-170)||(20627061-20627102)
chr3 (218-272)||(15572310-15572361)
chr3 (108-233)||(17042103-17042234)
chr3 (182-233)||(214438-214489)
chr3 (1-38)||(14585767-14585804)
chr3 (1-38)||(38530229-38530266)
chr3 (1-38)||(45047802-45047839)
chr3 (1-38)||(54706519-54706556)
chr3 (185-233)||(25020164-25020212)
[»] chr6 (44 HSPs)
chr6 (37-272)||(17235202-17235449)
chr6 (35-272)||(33666397-33666646)
chr6 (35-272)||(13195930-13196179)
chr6 (35-272)||(13869706-13869955)
chr6 (35-272)||(23879491-23879740)
chr6 (35-254)||(19077749-19077980)
chr6 (35-272)||(21722712-21722960)
chr6 (35-272)||(9281014-9281263)
chr6 (35-176)||(19172021-19172162)
chr6 (35-176)||(19100503-19100644)
chr6 (35-272)||(20989094-20989343)
chr6 (41-272)||(20653681-20653924)
chr6 (37-272)||(21705834-21706081)
chr6 (35-273)||(20465216-20465447)
chr6 (76-272)||(25970324-25970532)
chr6 (76-272)||(25974764-25974972)
chr6 (35-272)||(17855801-17856050)
chr6 (41-261)||(12039025-12039255)
chr6 (35-172)||(17527300-17527437)
chr6 (35-272)||(19893972-19894223)
chr6 (74-272)||(8464971-8465181)
chr6 (41-270)||(17863780-17864021)
chr6 (35-175)||(12028556-12028696)
chr6 (41-246)||(25806020-25806236)
chr6 (51-156)||(23882130-23882235)
chr6 (51-156)||(29253114-29253219)
chr6 (185-272)||(19168214-19168301)
chr6 (185-262)||(12385173-12385249)
chr6 (185-272)||(11992325-11992412)
chr6 (182-228)||(11961234-11961280)
chr6 (185-242)||(15930182-15930239)
chr6 (185-242)||(19598449-19598506)
chr6 (185-245)||(23882029-23882089)
chr6 (192-251)||(19172189-19172248)
chr6 (218-272)||(19100676-19100730)
chr6 (185-270)||(29252985-29253072)
chr6 (107-156)||(15930280-15930329)
chr6 (35-70)||(25969946-25969981)
chr6 (35-70)||(25974386-25974421)
chr6 (188-233)||(24542425-24542470)
chr6 (185-229)||(19658687-19658731)
chr6 (197-233)||(21316936-21316972)
chr6 (108-156)||(24542333-24542381)
chr6 (185-229)||(26964900-26964944)
[»] chr5 (26 HSPs)
chr5 (35-270)||(23419863-23420110)
chr5 (35-272)||(22251345-22251594)
chr5 (35-272)||(22404065-22404314)
chr5 (35-271)||(23757562-23757810)
chr5 (35-271)||(23823018-23823266)
chr5 (35-176)||(9421928-9422069)
chr5 (35-272)||(24190469-24190718)
chr5 (41-270)||(26037390-26037630)
chr5 (35-172)||(22245775-22245912)
chr5 (51-237)||(30605030-30605228)
chr5 (41-270)||(38405973-38406213)
chr5 (41-242)||(22082025-22082238)
chr5 (51-156)||(18221731-18221836)
chr5 (35-100)||(25104948-25105013)
chr5 (35-100)||(25164041-25164106)
chr5 (213-272)||(22240282-22240341)
chr5 (185-235)||(23624609-23624659)
chr5 (41-143)||(26328660-26328762)
chr5 (219-272)||(9420659-9420712)
chr5 (185-260)||(20714060-20714134)
chr5 (202-260)||(13941332-13941389)
chr5 (203-233)||(18221896-18221926)
chr5 (183-233)||(24118307-24118357)
chr5 (1-38)||(17732165-17732202)
chr5 (1-38)||(28040934-28040971)
chr5 (202-270)||(26328523-26328590)
[»] chr4 (20 HSPs)
chr4 (35-272)||(33898313-33898562)
chr4 (35-272)||(16384496-16384745)
chr4 (35-272)||(23399500-23399749)
chr4 (35-272)||(18600964-18601213)
chr4 (35-272)||(28019909-28020158)
chr4 (35-272)||(25117462-25117711)
chr4 (39-172)||(15161900-15162033)
chr4 (185-270)||(10724965-10725050)
chr4 (185-270)||(10938734-10938819)
chr4 (210-270)||(15161809-15161869)
chr4 (51-262)||(19182997-19183221)
chr4 (192-254)||(15623211-15623272)
chr4 (51-156)||(15699768-15699873)
chr4 (182-230)||(41786198-41786246)
chr4 (185-235)||(9069712-9069762)
chr4 (185-228)||(10197596-10197639)
chr4 (185-227)||(10718243-10718285)
chr4 (185-227)||(10932012-10932054)
chr4 (185-229)||(32862412-32862456)
chr4 (181-233)||(33744235-33744287)
[»] scaffold0185 (1 HSPs)
scaffold0185 (35-272)||(1672-1921)
[»] chr1 (21 HSPs)
chr1 (35-270)||(4246642-4246893)
chr1 (36-272)||(26971702-26971948)
chr1 (35-272)||(20200393-20200640)
chr1 (35-272)||(13166000-13166249)
chr1 (35-272)||(20840568-20840817)
chr1 (41-270)||(11667209-11667450)
chr1 (35-270)||(24986589-24986836)
chr1 (185-272)||(13150060-13150147)
chr1 (185-272)||(9452174-9452261)
chr1 (51-173)||(15803552-15803674)
chr1 (51-144)||(23477379-23477472)
chr1 (96-233)||(22891144-22891293)
chr1 (58-156)||(17850859-17850957)
chr1 (185-262)||(25349544-25349620)
chr1 (108-156)||(12753739-12753787)
chr1 (185-260)||(10339476-10339550)
chr1 (185-235)||(1626341-1626391)
chr1 (185-233)||(51471434-51471482)
chr1 (185-228)||(12753828-12753871)
chr1 (1-38)||(3233076-3233113)
chr1 (1-38)||(10627304-10627341)
[»] scaffold0088 (1 HSPs)
scaffold0088 (35-272)||(37196-37445)
[»] chr2 (16 HSPs)
chr2 (35-272)||(12911098-12911347)
chr2 (35-176)||(22611497-22611638)
chr2 (35-266)||(23759230-23759473)
chr2 (35-269)||(24789466-24789712)
chr2 (185-260)||(21249515-21249589)
chr2 (192-270)||(15329095-15329172)
chr2 (109-156)||(15329001-15329048)
chr2 (218-272)||(22614341-22614395)
chr2 (185-228)||(27108211-27108254)
chr2 (122-176)||(21531071-21531125)
chr2 (202-260)||(21531163-21531220)
chr2 (1-38)||(34416542-34416579)
chr2 (1-38)||(41797900-41797937)
chr2 (185-233)||(24311196-24311244)
chr2 (192-228)||(27111807-27111843)
chr2 (2-38)||(36868314-36868350)
[»] scaffold0024 (1 HSPs)
scaffold0024 (35-272)||(159677-159926)
[»] scaffold0453 (1 HSPs)
scaffold0453 (43-272)||(1305-1546)
[»] scaffold0037 (1 HSPs)
scaffold0037 (35-272)||(109563-109812)
[»] scaffold0103 (1 HSPs)
scaffold0103 (35-272)||(24982-25231)
[»] chr7 (29 HSPs)
chr7 (35-269)||(11520718-11520965)
chr7 (35-272)||(16207185-16207434)
chr7 (41-270)||(29545447-29545688)
chr7 (35-272)||(15506836-15507085)
chr7 (35-272)||(4459345-4459594)
chr7 (35-272)||(20992149-20992398)
chr7 (35-153)||(14165771-14165889)
chr7 (44-272)||(15438691-15438931)
chr7 (45-272)||(12326428-12326667)
chr7 (46-272)||(16221877-16222115)
chr7 (35-272)||(645742-645987)
chr7 (51-167)||(16437397-16437513)
chr7 (185-270)||(23082083-23082167)
chr7 (171-260)||(26132272-26132360)
chr7 (51-154)||(10280476-10280579)
chr7 (51-262)||(14927270-14927489)
chr7 (51-262)||(15350736-15350955)
chr7 (185-260)||(21261198-21261272)
chr7 (197-261)||(20924423-20924486)
chr7 (185-245)||(23960793-23960853)
chr7 (185-260)||(10038047-10038121)
chr7 (35-78)||(11999487-11999530)
chr7 (181-235)||(42636970-42637024)
chr7 (185-254)||(10661630-10661698)
chr7 (202-272)||(14165945-14166015)
chr7 (183-233)||(19295517-19295567)
chr7 (91-137)||(23082226-23082272)
chr7 (1-38)||(22747288-22747325)
chr7 (185-229)||(24902874-24902917)
[»] scaffold0359 (1 HSPs)
scaffold0359 (35-176)||(2496-2637)
[»] scaffold0059 (1 HSPs)
scaffold0059 (35-272)||(47695-47945)
[»] scaffold0226 (3 HSPs)
scaffold0226 (37-270)||(17431-17676)
scaffold0226 (37-270)||(26825-27070)
scaffold0226 (35-270)||(6845-7091)
[»] scaffold0190 (1 HSPs)
scaffold0190 (35-272)||(15926-16174)
[»] scaffold0213 (1 HSPs)
scaffold0213 (39-270)||(7885-8128)
[»] scaffold0259 (1 HSPs)
scaffold0259 (35-272)||(16630-16879)
[»] scaffold0069 (1 HSPs)
scaffold0069 (43-272)||(9288-9529)
[»] scaffold0003 (1 HSPs)
scaffold0003 (51-167)||(27027-27143)
[»] scaffold0006 (1 HSPs)
scaffold0006 (108-272)||(88425-88599)
[»] scaffold1001 (2 HSPs)
scaffold1001 (185-235)||(730-780)
scaffold1001 (108-176)||(642-710)
[»] scaffold0520 (2 HSPs)
scaffold0520 (185-228)||(5735-5778)
scaffold0520 (185-228)||(11990-12033)
[»] scaffold0035 (1 HSPs)
scaffold0035 (186-233)||(38074-38121)


Alignment Details
Target: chr8 (Bit Score: 148; Significance: 4e-78; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 35 - 272
Target Start/End: Complemental strand, 23540960 - 23540711
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  23540960 cgttccaaccaataacaaatatttcctaaaatataaaatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttaatcaataag 23540861  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtata--ta----------cagacacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
    ||||||||||| |||||||||| ||||||||||||||||||| |  ||          ||| |||||||||| ||||| ||||||||||||||| |||||    
T  23540860 ataaggaaatattgtttccttaaacaataaagggcgcgcgtacaagtaggcataaacccaggcacactaaactgtgccaggatgttggaacatcgtatcc 23540761  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    | ||||||||||||| |||||||||||||||| |||||||||||||||||    
T  23540760 atcatcttacagagatgcctaaacacatgttggaacattggttccaactt 23540711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 35 - 272
Target Start/End: Original strand, 22485739 - 22485988
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    ||||| |||||||| ||||||||||||||||||||| ||  |||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||    
T  22485739 cgttctaaacaatattaaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttaaatgatatgcgtgttgcttgatcaataag 22485838  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtatatacaga------------cacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
     || | ||||| |||||||||| ||||||||||||||||||| | |||||            |||||| ||| ||||| |||||||||| |||| |||||    
T  22485839 ttaggaaaatattgtttccttaaacaataaagggcgcgcgtacaaacagacgagaactcaggcacactgaactgtgccaggatgttggagcatcgtatcc 22485938  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    ||| | || ||||||| ||||||||||||||||||| |||||||||||||    
T  22485939 aactttttccagagacacctaaacacatgttgaaactttggttccaactt 22485988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 35 - 273
Target Start/End: Original strand, 45136717 - 45136966
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||| |||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||  ||||||| ||| ||||||  ||||||||    
T  45136717 cgttccaaccaataacaaatatttcctaaaatataaaatatactttagaaatattccacagctgattcttcaaagatatacgcattgctttgtcaataag 45136816  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgc-----gta------tatacagacacactaaaccgtgcctggatgttggaacatcatatcca 223  Q
    |||| |||||| |||||||||| ||||||||||||||||     |||       |  ||  |||||||||||||| | ||||||||||||||||||||||    
T  45136817 ataatgaaatattgtttccttaaacaataaagggcgcgctacaagtaggcaagaactcaagcacactaaaccgtgtcaggatgttggaacatcatatcca 45136916  T
Q  224 acatcttacagagacgcctaaacacatgttgaaacattggttccaacttg 273  Q
    |||||| |||||||  ||||||||||||||| ||||||| ||||||||||    
T  45136917 acatctaacagagatacctaaacacatgttggaacattgattccaacttg 45136966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 35 - 272
Target Start/End: Complemental strand, 27925006 - 27924757
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||| |||||| ||||||||| |||||||||| |||||||||||||||||||||||| |||||||    |||||||||||||||||  ||||||||    
T  27925006 cgttccaaccaataacaaatatttcataaaatataaaatctactttagaaatattccacagttgattctgtatagatatgcgcgttgctttgtcaataag 27924907  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtata--ta----------cagacacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
    ||||||||||| |||||||||| ||||||||| ||| ||||| |  ||          ||| |||||| || |||| | ||||||||||||||| |||||    
T  27924906 ataaggaaatattgtttccttaaacaataaagagcgtgcgtacaagtaggcatgaacccaggcacactgaatcgtgtcaggatgttggaacatcttatcc 27924807  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    ||||||||||||| | |||||||||||||||| |||||||||||||||||    
T  27924806 aacatcttacagaaatgcctaaacacatgttggaacattggttccaactt 27924757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 44 - 270
Target Start/End: Original strand, 33962348 - 33962586
Alignment:
Q  44 caataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagataaggaaa 143  Q
    |||||| |||| |||||||||| ||||   ||||||||| ||||||||||  ||||||||   |||||||||||||||||||||||||||||||||||||    
T  33962348 caataacaaatttttcctaaaaaataaatactactttaggaatattccacgactgattctgtaaagatatgcgcgttgcttgatcaataagataaggaaa 33962447  T
Q  144 tactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatccaacatctta 231  Q
    || |||||||||| ||||||||||||||||||| | |            ||| |||||| ||| ||||| |||||||||||||| |||||||||||||||    
T  33962448 tattgtttccttaaacaataaagggcgcgcgtacaaagagacatgacctcaggcacactgaactgtgccaggatgttggaacataatatccaacatctta 33962547  T
Q  232 cagagacgcctaaacacatgttgaaacattggttccaac 270  Q
    |||||| ||||||| |||||||| |||||||||||||||    
T  33962548 cagagatgcctaaatacatgttggaacattggttccaac 33962586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 44 - 270
Target Start/End: Original strand, 33977674 - 33977912
Alignment:
Q  44 caataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagataaggaaa 143  Q
    |||||| |||| |||||||||| ||||   ||||||||| ||||||||||| ||||||||   ||||||||||| |||||||||||||||||||||||||    
T  33977674 caataacaaatttttcctaaaaaataaatactactttaggaatattccacaactgattctgtaaagatatgcgcattgcttgatcaataagataaggaaa 33977773  T
Q  144 tactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatccaacatctta 231  Q
    || |||||||||| |||||||||||||| |||| | |            |||||||||| ||| ||| | |||||||||||||| |||||||||||||||    
T  33977774 tattgtttccttaaacaataaagggcgcacgtacaaataggcatgaacccagacacactgaactgtgtcaggatgttggaacataatatccaacatctta 33977873  T
Q  232 cagagacgcctaaacacatgttgaaacattggttccaac 270  Q
    |||||| ||||||| |||||||| |||||||||||||||    
T  33977874 cagagatgcctaaatacatgttggaacattggttccaac 33977912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 41 - 266
Target Start/End: Original strand, 26536898 - 26537136
Alignment:
Q  41 aaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaa-gatatgcgcgttgcttgatcaataagataag 139  Q
    ||||||||| ||||||||| ||||||||||   ||||||||| |||||| |||| |||||| ||  || ||||||||||||||||| |||||||||||||    
T  26536898 aaacaataacaaatatttcataaaatataaatactactttaggaatatttcacaactgatttttgtaaagatatgcgcgttgcttggtcaataagataag 26536997  T
Q  140 gaaatactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatccaacat 227  Q
    |||||| |||||||||| || ||||  ||||| |||| | |             ||||||||| |||||||||  |||||||||||||||||||||||||    
T  26536998 gaaatattgtttccttaaaccataagtggcgcacgtacaaataggcatgaacctagacacactgaaccgtgccatgatgttggaacatcatatccaacat 26537097  T
Q  228 cttacagagacgcctaaacacatgttgaaacattggttc 266  Q
    ||||| || | |||||||||||||||  || ||||||||    
T  26537098 cttacggatatgcctaaacacatgttagaagattggttc 26537136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 100 - 176
Target Start/End: Original strand, 22476808 - 22476884
Alignment:
Q  100 ttcttagaagatatgcgcgttgcttgatcaataagataaggaaatactgtttccttacacaataaagggcgcgcgta 176  Q
    |||||||| |||||||| ||||||||||||||||| || ||||||| |||||||||| |||||||||||||||||||    
T  22476808 ttcttagatgatatgcgtgttgcttgatcaataagttagggaaatattgtttccttaaacaataaagggcgcgcgta 22476884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 18622429 - 18622481
Alignment:
Q  185 cacactaaaccgtgcctggatgttggaacatcatatccaacatcttacagaga 237  Q
    |||||| |||||||||  |||||||||||||| ||||||||||||||||||||    
T  18622429 cacactgaaccgtgccaagatgttggaacatcgtatccaacatcttacagaga 18622481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 260
Target Start/End: Complemental strand, 20254268 - 20254194
Alignment:
Q  185 cacactaaaccgtgcctggatgttggaacatcatatccaacatcttacagagacgcctaaacacatgttgaaacat 260  Q
    |||||| ||||||| | |||||||||||||||||||||||||| | ||||  | ||||||| |||||||| |||||    
T  20254268 cacactgaaccgtgtcaggatgttggaacatcatatccaacatttcacaggaatgcctaaa-acatgttggaacat 20254194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 37128312 - 37128275
Alignment:
Q  1 atattagttaaatttgtaggcatatgtactttgccgtt 38  Q
    |||||||| | |||||||||||||||||||||||||||    
T  37128312 atattagtcatatttgtaggcatatgtactttgccgtt 37128275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 272
Target Start/End: Original strand, 22476893 - 22476929
Alignment:
Q  236 gacgcctaaacacatgttgaaacattggttccaactt 272  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  22476893 gacgcctaaacacatgttgaaactttggctccaactt 22476929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 39067513 - 39067477
Alignment:
Q  2 tattagttaaatttgtaggcatatgtactttgccgtt 38  Q
    ||||||| | |||||||||||||||||||||||||||    
T  39067513 tattagtcatatttgtaggcatatgtactttgccgtt 39067477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 35 - 272
Target Start/End: Original strand, 16111 - 16360
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  16111 cgttccaaacaataataaatatttcctaaaatataaaatacactttagaaatattccatagctgattcttagaagatatgcgcgttgcttgatcaataag 16210  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtatatacaga------------cacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
     |||||||||| |||||||||| ||||||||||| ||||||| | |||||            |||||| ||||||||| ||||||||||||||| |||||    
T  16211 ttaaggaaatattgtttccttaaacaataaagggtgcgcgtacaaacagaagagaactcaggcacactgaaccgtgccaggatgttggaacatcgtatcc 16310  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    |||||||| |||||||||||||||||||||| |||| |||||||||||||    
T  16311 aacatcttccagagacgcctaaacacatgttcaaactttggttccaactt 16360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 145; Significance: 2e-76; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 35 - 272
Target Start/End: Complemental strand, 17135698 - 17135449
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||||||||| ||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17135698 cgttccaaacaatattaaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 17135599  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
     |||||||||| |||||||||| |||||||| |||||||||| |||            ||| |||||  ||||||||| |||||||||| ||||||||||    
T  17135598 ttaaggaaatattgtttccttaaacaataaaaggcgcgcgtacatagaggcgagaactcaggcacaccgaaccgtgccaggatgttggagcatcatatcc 17135499  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  17135498 aacatcttccagagacgcctaaacacatgttgaaactttggttccaactt 17135449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 35 - 272
Target Start/End: Complemental strand, 18482926 - 18482677
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||||||| ||||||||||||||||||||||| ||  |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  18482926 cgttccaaacaagaataaatatttcctaaaatataaaatacactttagaaatattccacaattgattcttagaagatatgcgcgttgcttgatcaataag 18482827  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
    ||||||||||| |||||||||| ||||||||||| ||||||| | |            |||||||||| ||||||| | |||||||| |||||| |||||    
T  18482826 ataaggaaatattgtttccttaaacaataaagggtgcgcgtacaaacaggcgagaactcagacacactgaaccgtgtcaggatgttgaaacatcgtatcc 18482727  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    |||||||||||||||||||||||||||| ||| ||| |||||||||||||    
T  18482726 aacatcttacagagacgcctaaacacatattggaactttggttccaactt 18482677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 36 - 272
Target Start/End: Original strand, 13791284 - 13791532
Alignment:
Q  36 gttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataaga 135  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||    
T  13791284 gttccaaacaataataaatatttcctaaaatataatatttactttagaaatattccacaactgattcttagaagatatgtgcgttgtttgatcaataaga 13791383  T
Q  136 taaggaaatactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatcca 223  Q
    |||||||||| |||||||||| ||||||||||||||||||| | |            ||| |||| | |||| || | |||||||| | |||  ||||||    
T  13791384 taaggaaatattgtttccttaaacaataaagggcgcgcgtacaaacaggcgagaactcaggcacattgaaccatgtcaggatgttgaagcattgtatcca 13791483  T
Q  224 acatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    ||||||| |||||||| ||||||||||||||||||||||||| ||||||    
T  13791484 acatcttccagagacgtctaaacacatgttgaaacattggtttcaactt 13791532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 35 - 272
Target Start/End: Original strand, 24196131 - 24196380
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||||||||| ||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||     
T  24196131 cgttccaaacaatattaaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagatgatatgcgcgttgcttgatcaataaa 24196230  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
     |||||||||| |||||||||| ||||||||||  |||| || | |            ||| |||||| ||||||||| |||||||| | ||||  ||||    
T  24196231 ttaaggaaatattgtttccttaaacaataaaggatgcgcatacaaacaggcgagaactcaggcacactgaaccgtgccaggatgttgaagcatcgcatcc 24196330  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  24196331 aacatcttccagagacgcctaaacacatgttgaaactttggttccaactt 24196380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 35 - 272
Target Start/End: Complemental strand, 23954111 - 23953862
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||||||||| ||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||    
T  23954111 cgttccaaacaatattaaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagatgacatgcgcgttgtttgatcaataag 23954012  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
     |||||||||| |||||||||| |||||||||||||| |||||| |            ||| |||||| ||||||||  ||||||||||  ||  ||||     
T  23954011 ttaaggaaatattgtttccttaaacaataaagggcgcacgtataaacaagcgagaactcaggcacactgaaccgtgctaggatgttggaggattgtatct 23953912  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    |||||||| |||||||||||||||||| |||||||| |||||||||||||    
T  23953911 aacatcttccagagacgcctaaacacacgttgaaactttggttccaactt 23953862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 35 - 272
Target Start/End: Complemental strand, 13515172 - 13514922
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||| |||||| |||||||||||||||||||| ||||||||| ||||||||||||| ||||||||    |||||||||||||||||||||||||||    
T  13515172 cgttccaaccaataacaaatatttcctaaaatataaaatctacttttgaaatattccacaactgattctgtatagatatgcgcgttgcttgatcaataag 13515073  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtata--ta-----------cagacacactaaaccgtgcctggatgttggaacatcatatc 221  Q
    ||||||||||| |||||||||| |||||||||||||| || | |  ||           ||  |||||| ||||||||  ||||||||||||||| ||||    
T  13515072 ataaggaaatattgtttccttaaacaataaagggcgcacgcacaagtaggcaagtaactcaagcacactgaaccgtgctaggatgttggaacatcgtatc 13514973  T
Q  222 caacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    |||||||||||||||| || ||||||||||||| |||||||||||||||||    
T  13514972 caacatcttacagagatgcttaaacacatgttggaacattggttccaactt 13514922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 35 - 272
Target Start/End: Complemental strand, 7028624 - 7028375
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    ||||||||||||||  |||||||||||||||||||| ||  ||||||||||||||| || ||||||||| ||| ||||||||||||||||||||||||||    
T  7028624 cgttccaaacaatataaaatatttcctaaaatataaaatacactttagaaatattctacggctgattctcagatgatatgcgcgttgcttgatcaataag 7028525  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
    ||||||||||| |||||||||| | |||||||||||| |||| | |            ||| |||||| |||||||||   |||||||| |||| |||||    
T  7028524 ataaggaaatattgtttccttaaataataaagggcgcacgtacaaataggcgagaactcagtcacactgaaccgtgccaaaatgttggagcatcgtatcc 7028425  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    |||||||| |||||||||||||||||||||||  || |||||||||||||    
T  7028424 aacatcttccagagacgcctaaacacatgttggcactttggttccaactt 7028375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 35 - 168
Target Start/End: Complemental strand, 15572556 - 15572423
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||||||||||||||||||||||||||||||| ||  ||||| |||||||||||||| ||||||||||||||||| ||||||| ||||||||||||    
T  15572556 cgttccaaacaataataaatatttcctaaaatataaaatacacttttgaaatattccacagatgattcttagaagatatacgcgttggttgatcaataag 15572457  T
Q  135 ataaggaaatactgtttccttacacaataaaggg 168  Q
    ||||||||||| |||||||||| |||||||||||    
T  15572456 ataaggaaatattgtttccttaaacaataaaggg 15572423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 35 - 156
Target Start/End: Original strand, 18548254 - 18548375
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||  ||||||||||||||||||    
T  18548254 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagttgattcttaaaagatatgtccgttgcttgatcaataag 18548353  T
Q  135 ataaggaaatactgtttcctta 156  Q
    ||||||||||| ||| ||||||    
T  18548354 ataaggaaatattgtgtcctta 18548375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 37 - 176
Target Start/End: Original strand, 19634488 - 19634625
Alignment:
Q  37 ttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagat 136  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||| |    
T  19634488 ttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagata--cgcgttgcttgatcagtaagtt 19634585  T
Q  137 aaggaaatactgtttccttacacaataaagggcgcgcgta 176  Q
    ||||||||| |||||||  | ||||||| |||||| ||||    
T  19634586 aaggaaatattgtttccgaaaacaataacgggcgcacgta 19634625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 37 - 272
Target Start/End: Complemental strand, 1918795 - 1918548
Alignment:
Q  37 ttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagat 136  Q
    |||||||||||| ||||||||||||||||||||| ||  |||||| |||||||| ||| |  ||||||||| |||||||||||||||||||||||||| |    
T  1918795 ttccaaacaatattaaatatttcctaaaatataaaatacactttaaaaatattctacaacgaattcttagatgatatgcgcgttgcttgatcaataagtt 1918696  T
Q  137 aaggaaatactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatccaa 224  Q
    ||||||||| |||||||||| |||||||||||||| |||| | |            ||| |||||| ||||||||  |||||||| | ||||  || |||    
T  1918695 aaggaaatattgtttccttaaacaataaagggcgcacgtacaaacatgcgagaactcaggcacactgaaccgtgctaggatgttgaagcatcgcatacaa 1918596  T
Q  225 catcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    |||||| |||||||  |||||||||||||||||| |||||||||||||    
T  1918595 catcttccagagacctctaaacacatgttgaaactttggttccaactt 1918548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 41 - 270
Target Start/End: Complemental strand, 18063754 - 18063513
Alignment:
Q  41 aaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattct-tagaagatatgcgcgttgcttgatcaataagataag 139  Q
    |||||||| |||||||||||||||||||||   |||||||||||||||||| ||||||||||| ||||| ||||||| |||||||| |||||||||||||    
T  18063754 aaacaatattaaatatttcctaaaatataaatactactttagaaatattcctcagctgattctgtagaa-atatgcgtgttgcttggtcaataagataag 18063656  T
Q  140 gaaatactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatccaacat 227  Q
    |||||| |||||||||| ||||| || ||||| |||| |||             || |||||| ||||||||| |||||||||||| || ||||||||||    
T  18063655 gaaatattgtttccttaaacaatgaaaggcgcacgtacatataggcaagaaccaaggcacactgaaccgtgccaggatgttggaacgtcgtatccaacat 18063556  T
Q  228 cttacagagacgcctaaacacatgttgaaacattggttccaac 270  Q
    |||||| ||| |||||| || | ||||||||||||||||||||    
T  18063555 cttacaaagatgcctaatcatacgttgaaacattggttccaac 18063513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 76 - 270
Target Start/End: Original strand, 28051789 - 28051991
Alignment:
Q  76 actttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagataaggaaatactgtttccttacacaataaagggcgcgcgt 175  Q
    ||||||| ||||||||||| ||||||||   |||||| |||||||| ||| |||||| |||||||||||| ||||||||||   ||||   |||||||||    
T  28051789 actttaggaatattccacaactgattctgtaaagatacgcgcgttgtttggtcaataggataaggaaatattgtttccttaagtaatattaggcgcgcgt 28051888  T
Q  176 atatacaga--------cacactaaaccgtgcctggatgttggaacatcatatccaacatcttacagagacgcctaaacacatgttgaaacattggttcc 267  Q
    |||  || |        ||||| |||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  28051889 ataggcataaacgcatgcacacaaaaccgtgccaggatgttggaacatcgtatccaacatcttacagagatgcctaaacacatgttggaacattggttcc 28051988  T
Q  268 aac 270  Q
    |||    
T  28051989 aac 28051991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 41 - 176
Target Start/End: Original strand, 296053 - 296188
Alignment:
Q  41 aaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagataagg 140  Q
    ||||||||| ||||||||||||||||||||   | ||||||| ||||||||||  ||||||||   |||||| ||| |||||||| ||||||||||||||    
T  296053 aaacaataacaaatatttcctaaaatataaatgcaactttaggaatattccacctctgattctgtaaagatacgcgtgttgcttggtcaataagataagg 296152  T
Q  141 aaatactgtttccttacacaataaagggcgcgcgta 176  Q
    ||||| |||||||||| |||||||||||||| ||||    
T  296153 aaatattgtttccttaaacaataaagggcgcacgta 296188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 181 - 272
Target Start/End: Complemental strand, 20627038 - 20626947
Alignment:
Q  181 cagacacactaaaccgtgcctggatgttggaacatcatatccaacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    |||||||||||||||||||| ||||||||||||||  ||||||| |||||||||||| |||||||||||||||| ||||||| |||||||||    
T  20627038 cagacacactaaaccgtgccaggatgttggaacattgtatccaatatcttacagagatgcctaaacacatgttggaacattgattccaactt 20626947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 181 - 270
Target Start/End: Original strand, 21547547 - 21547636
Alignment:
Q  181 cagacacactaaaccgtgcctggatgttggaacatcatatccaacatcttacagagacgcctaaacacatgttgaaacattggttccaac 270  Q
    |||||||||| ||| ||| | ||| ||||||||||| |||||||||||||| ||||| || ||||||||||||| |||||||||||||||    
T  21547547 cagacacactgaactgtgtcaggaagttggaacatcgtatccaacatcttatagagatgcataaacacatgttggaacattggttccaac 21547636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 51 - 145
Target Start/End: Complemental strand, 21253534 - 21253440
Alignment:
Q  51 aaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagataaggaaata 145  Q
    |||||||||||||||||||||  |  |||||| |||||| |||| ||||||||   |||||||||| |||||||| |||||||||||||||||||    
T  21253534 aaatatttcctaaaatataatcacatctttaggaatattacacaactgattctgtaaagatatgcgtgttgcttggtcaataagataaggaaata 21253440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 182 - 260
Target Start/End: Complemental strand, 286294 - 286217
Alignment:
Q  182 agacacactaaaccgtgcctggatgttggaacatcatatccaacatcttacagagacgcctaaacacatgttgaaacat 260  Q
    ||||||||| ||||||||  ||||||||||||||| |||||||||||||||||||| |||| || |||||||| |||||    
T  286294 agacacactgaaccgtgctaggatgttggaacatcgtatccaacatcttacagagatgcctgaa-acatgttggaacat 286217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 181 - 254
Target Start/End: Complemental strand, 6578944 - 6578872
Alignment:
Q  181 cagacacactaaaccgtgcctggatgttggaacatcatatccaacatcttacagagacgcctaaacacatgttg 254  Q
    |||||||||| ||||||| | ||||||||||||||| |||||||||||||||||| | ||||||| ||||||||    
T  6578944 cagacacactgaaccgtgtcaggatgttggaacatcgtatccaacatcttacagaaatgcctaaa-acatgttg 6578872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 84
Target Start/End: Original strand, 44453089 - 44453137
Alignment:
Q  36 gttccaaacaataataaatatttcctaaaatataatatctactttagaa 84  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  44453089 gttccaaccaataataaatatttcctaaaatataaaatctactttagaa 44453137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 979772 - 979722
Alignment:
Q  185 cacactaaaccgtgcctggatgttggaacatcatatccaacatcttacaga 235  Q
    |||||| |||||||||  |||||||||||||||||||||||||||||||||    
T  979772 cacactgaaccgtgccgagatgttggaacatcatatccaacatcttacaga 979722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Complemental strand, 3551870 - 3551820
Alignment:
Q  185 cacactaaaccgtgcctggatgttggaacatcatatccaacatcttacaga 235  Q
    |||||| |||||||||  |||||||||||||||||||||||||||||||||    
T  3551870 cacactgaaccgtgccacgatgttggaacatcatatccaacatcttacaga 3551820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 20627102 - 20627061
Alignment:
Q  129 aataagataaggaaatactgtttccttacacaataaagggcg 170  Q
    ||||||||||||||||| |||||||||| |||||||||||||    
T  20627102 aataagataaggaaatattgtttccttaaacaataaagggcg 20627061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 272
Target Start/End: Complemental strand, 15572361 - 15572310
Alignment:
Q  218 tatccaacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    |||||||||||||||||||||||||||||||   ||  |||||||||||||||||    
T  15572361 tatccaacatcttacagagacgcctaaacac---tttgaacattggttccaactt 15572310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 233
Target Start/End: Complemental strand, 17042234 - 17042103
Alignment:
Q  108 agatatgcgcgttgcttgatcaataagataaggaaatactgtttccttacacaataaagggcgcgcgtatata------cagacacactaaaccgtgcct 201  Q
    |||||||| | ||||||| |||||||||||||||||||  ||||||||| | |||| | |||||| |||   |      ||| |||||| |||||||||     
T  17042234 agatatgcacattgcttggtcaataagataaggaaatatggtttccttaaataatataaggcgcgtgtaggcatgaacccaggcacactgaaccgtgcca 17042135  T
Q  202 ggatgttggaacatcatatccaacatcttaca 233  Q
    |||||| |||||||| ||||||||||| ||||    
T  17042134 ggatgtcggaacatcgtatccaacatcataca 17042103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 182 - 233
Target Start/End: Complemental strand, 214489 - 214438
Alignment:
Q  182 agacacactaaaccgtgcctggatgttggaacatcatatccaacatcttaca 233  Q
    ||||||||| |||||||||  |||||||||||||| ||||||||||| ||||    
T  214489 agacacactgaaccgtgccaagatgttggaacatcgtatccaacatcataca 214438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 14585767 - 14585804
Alignment:
Q  1 atattagttaaatttgtaggcatatgtactttgccgtt 38  Q
    |||||||| | |||||||||||||||||||||||||||    
T  14585767 atattagtcatatttgtaggcatatgtactttgccgtt 14585804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 38530229 - 38530266
Alignment:
Q  1 atattagttaaatttgtaggcatatgtactttgccgtt 38  Q
    |||||||| | |||||||||||||||||||||||||||    
T  38530229 atattagtcatatttgtaggcatatgtactttgccgtt 38530266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 45047802 - 45047839
Alignment:
Q  1 atattagttaaatttgtaggcatatgtactttgccgtt 38  Q
    |||||||||| || ||||||||||||||||||||||||    
T  45047802 atattagttatatatgtaggcatatgtactttgccgtt 45047839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 54706556 - 54706519
Alignment:
Q  1 atattagttaaatttgtaggcatatgtactttgccgtt 38  Q
    |||||||| | |||||||||||||||||||||||||||    
T  54706556 atattagtcatatttgtaggcatatgtactttgccgtt 54706519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 25020164 - 25020212
Alignment:
Q  185 cacactaaaccgtgcctggatgttggaacatcatatccaacatcttaca 233  Q
    |||||||||||||| |  |||||||||||||| ||||||||||| ||||    
T  25020164 cacactaaaccgtggcaagatgttggaacatcgtatccaacatcataca 25020212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 143; Significance: 4e-75; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 37 - 272
Target Start/End: Original strand, 17235202 - 17235449
Alignment:
Q  37 ttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagat 136  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |    
T  17235202 ttccaaacaataataaatatttcctaaaatataatatctaatttagaaatattccacatctgattcttagaagatatgcgtgttgcttgatcaataagtt 17235301  T
Q  137 aaggaaatactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatccaa 224  Q
    ||||||||| |||||||||| ||||||| ||||||||||| | |            ||| |||||| ||||||||| |||||||||| |||| |||||||    
T  17235302 aaggaaatattgtttccttaaacaataacgggcgcgcgtacaaacatgcgagaactcaggcacactgaaccgtgccaggatgttggagcatcgtatccaa 17235401  T
Q  225 catcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||    
T  17235402 catcttacagagacgcctaaacacatgttggaacattgattccaactt 17235449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 35 - 272
Target Start/End: Original strand, 33666397 - 33666646
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||    
T  33666397 cgttccaaacaataataaatatttcctaaaatataaaatacactttagaaatattccacaactgattcttagaagttatgcgcgttacttgatcaataag 33666496  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
    ||||||||||| |||||||||| ||||||||||| ||||||| | |            ||| |||||| ||||||||| |||||||||| ||||||||||    
T  33666497 ataaggaaatattgtttccttaaacaataaagggtgcgcgtaaaaacaggcgagaactcaggcacactgaaccgtgccaggatgttggagcatcatatcc 33666596  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||    
T  33666597 aacatcttccaaagacgcctaaacacatgttgaaacattggttccaactt 33666646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 35 - 272
Target Start/End: Original strand, 13195930 - 13196179
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  13195930 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatccattag 13196029  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgc------------gcgtatatacagacacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
    ||||  ||||| |||||||||| ||||||||||||||            || |  |  ||| |||||| ||||||||| ||||||||||||||| |||||    
T  13196030 ataaacaaatattgtttccttaaacaataaagggcgcatatacaagtaggcatgaacccaggcacactgaaccgtgccaggatgttggaacatcgtatcc 13196129  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    ||||||||| ||||| | |||||||||||||| |||||||||||||||||    
T  13196130 aacatcttatagagatgtctaaacacatgttggaacattggttccaactt 13196179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 35 - 272
Target Start/End: Complemental strand, 13869955 - 13869706
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||    
T  13869955 cgttctaaacaataataaatatttcctaaaatataatatctactttagaaatattccacaactaattcttagaagatatgcgtgttgcttgatcaataag 13869856  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
    ||||||||||| ||| |||||| ||||||||||| || |||| |||            ||  |||||| ||||||||| ||||||||||| ||   ||||    
T  13869855 ataaggaaatattgtgtccttaaacaataaagggtgcacgtacatataggcgagaactcaagcacactgaaccgtgccaggatgttggaaaattgcatcc 13869756  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  13869755 aacatcttacaaagatgcctaaacacatgttgaaacattggttccaactt 13869706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 35 - 272
Target Start/End: Original strand, 23879491 - 23879740
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||||||||| ||||||||||| ||||||||| ||  ||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||    
T  23879491 cgttccaaacaatattaaatatttcccaaaatataaaatacactttagaaatattccacaactgattcttagatgatatgcgtgttgcttgatcaataag 23879590  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
     |||||||||| |||||||||| ||||||||||| ||| ||| | |            ||| |||||| ||||||||| |||||||||| |||| |||||    
T  23879591 ttaaggaaatattgtttccttaaacaataaagggtgcgtgtacaaacaggtgaaaactcaggcacactgaaccgtgccaggatgttggagcatcgtatcc 23879690  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  23879691 aacatcttccagagacgcctaaacacatgttgaaactttggttccaactt 23879740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 35 - 254
Target Start/End: Original strand, 19077749 - 19077980
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||     
T  19077749 cgttccaaccaataataaatatttcctaaaatataaaatctactttagaaatattccacagctgattcttagaagatatgcgtgttgcttgatcaataat 19077848  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtatat------------acagacacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
    ||||||||||| |||||||||| ||||| |||||||| |||| ||             ||| |||||| |||||||||  |||||||||||||| |||||    
T  19077849 ataaggaaatattgtttccttaaacaatgaagggcgcacgtacatgtaggcatgagctcaggcacactgaaccgtgccaagatgttggaacatcgtatcc 19077948  T
Q  223 aacatcttacagagacgcctaaacacatgttg 254  Q
    ||||||||||| | | ||||||||||||||||    
T  19077949 aacatcttacaaacatgcctaaacacatgttg 19077980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 35 - 272
Target Start/End: Complemental strand, 21722960 - 21722712
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||  ||||||| || ||||||||    
T  21722960 cgttccaaataataataaatatttcctaaaatataatatctactttagaaatattctacagctgattcttagatgatatatgcgttgcctggtcaataag 21722861  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcg-tatata----------cagacacactaaaccgtgcctggatgttggaacatcatatcca 223  Q
    ||||||||| | |||||||||| |||||||||||||||||  |||||          ||| |||||| |||| |||| ||||||||||||||  ||||||    
T  21722860 ataaggaaagattgtttccttaaacaataaagggcgcgcgacatataggcaagaacccaggcacactgaaccatgccaggatgttggaacattgtatcca 21722761  T
Q  224 acatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    |||||||||||||  |||||| ||||||||| ||| |||||||||||||    
T  21722760 acatcttacagagttgcctaaccacatgttggaactttggttccaactt 21722712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 35 - 272
Target Start/End: Complemental strand, 9281263 - 9281014
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    ||||| ||||||||||||||||||||||||| |||| ||  |||||||||||||| |||||||||||||| || ||||||||||||||||||||||||||    
T  9281263 cgttctaaacaataataaatatttcctaaaacataaaatacactttagaaatatttcacagctgattctttgatgatatgcgcgttgcttgatcaataag 9281164  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
     |||||||||| ||||| |||| ||||| ||||||||| ||| | |            ||| |||||| || |||||| |||||||||| ||||||||||    
T  9281163 ttaaggaaatattgttttcttaaacaatgaagggcgcgtgtacaaacaggcgagaactcaggcacactgaatcgtgccaggatgttggagcatcatatcc 9281064  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  9281063 aacatctttcagagacgcctaaacacatgttgaaactttggttccaactt 9281014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 35 - 176
Target Start/End: Original strand, 19172021 - 19172162
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||    
T  19172021 cgttccaaccaataataaatatttcctaaaatataaaatctactttagaaatgttccgcagctgattcttagaagatatgcgcgttacttgatcaataag 19172120  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgta 176  Q
    ||||||||||| |||||||||| |||||||||||||||||||    
T  19172121 ataaggaaataatgtttccttaaacaataaagggcgcgcgta 19172162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 35 - 176
Target Start/End: Original strand, 19100503 - 19100644
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||    
T  19100503 cgttccaaccaataataaatatttcctaaaatataaaatctactttggaaatattccacagctgattcttagaagatatgtgtgttgcttgatcaataag 19100602  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgta 176  Q
    ||||||||||| |||||||||| ||||||||||| |||||||    
T  19100603 ataaggaaatattgtttccttaaacaataaagggtgcgcgta 19100644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 35 - 272
Target Start/End: Complemental strand, 20989343 - 20989094
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  20989343 cgttccaaccaataacaaatatttcctaaaatataaaatctactttagaaatattccacaactgattcttagaagatatgcgcgttgctagatcaataag 20989244  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtata--ta----------cagacacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
    | ||||||||| |||||||||| ||||||||| |||| |||| |  ||           ||||||||| |||||||   ||||||| ||||||| |||||    
T  20989243 aaaaggaaatattgtttccttatacaataaagcgcgctcgtacaagtaggcatgaaccaagacacactgaaccgtgtgaggatgtttgaacatcgtatcc 20989144  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    || |||||||| ||| |||||||||||||||| ||| || ||||||||||    
T  20989143 aatatcttacatagatgcctaaacacatgttggaacttttgttccaactt 20989094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 41 - 272
Target Start/End: Original strand, 20653681 - 20653924
Alignment:
Q  41 aaacaataataaatatttcctaaaatataa-tatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagataag 139  Q
    ||||||||| ||||||||| |||||||||| ||| |||||||||||||||||||||||||||||   |||||||| ||||||||||||||||||||||||    
T  20653681 aaacaataacaaatatttcttaaaatataaatat-tactttagaaatattccacagctgattctgtaaagatatgtgcgttgcttgatcaataagataag 20653779  T
Q  140 gaaatactgtttccttacacaataaagggcgcgcgtata--ta----------cagacacactaaaccgtgcctggatgttggaacatcatatccaacat 227  Q
    |||||| |||||||||| ||||||||||||||||||| |  ||          |||||||||| |||||| || |||| ||||||||||| |||||||||    
T  20653780 gaaatattgtttccttaaacaataaagggcgcgcgtaaaagtaggcatgaacccagacacactgaaccgttccaggatcttggaacatcacatccaacat 20653879  T
Q  228 cttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    |||| ||||| |||||||||||||||| ||||||| || ||||||    
T  20653880 cttatagagatgcctaaacacatgttggaacattgatttcaactt 20653924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 37 - 272
Target Start/End: Complemental strand, 21706081 - 21705834
Alignment:
Q  37 ttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagat 136  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| ||||||||||    
T  21706081 ttccaaataataataaatatttcctaaaatataatatctactttagaaatattccacaactgattcttagatgatatacgcgttgcttggtcaataagat 21705982  T
Q  137 aaggaaatactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatccaa 224  Q
    ||||||||| ||||| |||| |||||||||||||||| || |||            ||| |||||| || | ||||  ||| |||||||||  |||||||    
T  21705981 aaggaaatattgtttacttaaacaataaagggcgcgcataaatataggcaagaacccaggcacactgaagcatgccaagatattggaacattgtatccaa 21705882  T
Q  225 catcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    ||||||| ||||  |||||| ||||||||| ||| |||||||||||||    
T  21705881 catcttatagagttgcctaaccacatgttggaactttggttccaactt 21705834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 35 - 273
Target Start/End: Complemental strand, 20465447 - 20465216
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||| |||||| ||||||||||||||||||||   ||||||||||||||||||||||||||||||   |||||||| |||||||||| ||||||||    
T  20465447 cgttccaaccaataacaaatatttcctaaaatataaatactactttagaaatattccacagctgattctgtaaagatatgtgcgttgcttggtcaataag 20465348  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtatatacagacacactaaaccgtgcctggatgttggaacatcatatccaacatcttacag 234  Q
    ||||||||||| |||||||||| ||||||||| ||||||||| | | |||     | |||    |  |||||||||||||||||||||||||||||| ||    
T  20465347 ataaggaaatattgtttccttaaacaataaagagcgcgcgtacaaaaaga---tgtgaac----ctaggatgttggaacatcatatccaacatcttatag 20465255  T
Q  235 agacgcctaaacacatgttgaaacattggttccaacttg 273  Q
    ||| |||||||||||||||| |||| | |||||||||||    
T  20465254 agatgcctaaacacatgttggaacaattgttccaacttg 20465216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 76 - 272
Target Start/End: Original strand, 25970324 - 25970532
Alignment:
Q  76 actttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagataaggaaatactgtttccttacacaataaagggcgcgcgt 175  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||| |||||||||| |||||||||| |||||||||||||| ||     
T  25970324 actttagaaatattccacagctgattcttagaaaatatgcgcgttgcttagtcaataagttaaggaaatattgtttccttaaacaataaagggcgcacgc 25970423  T
Q  176 atata------------cagacacactaaaccgtgcctggatgttggaacatcatatccaacatcttacagagacgcctaaacacatgttgaaacattgg 263  Q
    | | |            ||| |||||| |||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  25970424 acaaacaggtgacaactcaggcacactgaaccgtgccaagatgttggagcatcatatccaacatcttacagagacgcctaaacacatgttggaacattgg 25970523  T
Q  264 ttccaactt 272  Q
    |||||||||    
T  25970524 ttccaactt 25970532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 76 - 272
Target Start/End: Original strand, 25974764 - 25974972
Alignment:
Q  76 actttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagataaggaaatactgtttccttacacaataaagggcgcgcgt 175  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||  |||||||| |||||||||| |||||||||| |||||||||||||| ||     
T  25974764 actttagaaatattccacagctgattcttagaaaatatgcgcgttgcttagtcaataagttaaggaaatattgtttccttaaacaataaagggcgcacgc 25974863  T
Q  176 atata------------cagacacactaaaccgtgcctggatgttggaacatcatatccaacatcttacagagacgcctaaacacatgttgaaacattgg 263  Q
    | | |            ||| |||||| |||||||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  25974864 acaaacaggtgacaactcaggcacactgaaccgtgccaagatgttggagcatcatatccaacatcttacagagacgcctaaacacatgttggaacattgg 25974963  T
Q  264 ttccaactt 272  Q
    |||||||||    
T  25974964 ttccaactt 25974972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 35 - 272
Target Start/End: Original strand, 17855801 - 17856050
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||| ||||||||||||||||||||||||||||| ||  ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  17855801 cgttccgaacaataataaatatttcctaaaatataaaatacactttcgaaatattccacagctgattcttagaagatatgcgcattgcttgatcaataag 17855900  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
     |||| ||||| |||||||||| ||||||||||| || |||| | |            ||| |||||| ||||||||  |||||||| | ||||  ||||    
T  17855901 ttaagaaaatattgtttccttaaacaataaagggtgcacgtacaaacaagcaagaactcaggcacactgaaccgtgctaggatgttgaagcatcgcatcc 17856000  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    |||||||| |||||||||||||||| |||||| ||| ||| |||||||||    
T  17856001 aacatcttccagagacgcctaaacaaatgttggaactttgattccaactt 17856050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 41 - 261
Target Start/End: Complemental strand, 12039255 - 12039025
Alignment:
Q  41 aaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagataagg 140  Q
    ||||||||| ||||||||||||||||||||   ||||||||||||||||||||||||||||||   |||||||| | |||||||| ||||||||||||||    
T  12039255 aaacaataacaaatatttcctaaaatataaatactactttagaaatattccacagctgattctgtaaagatatgtgtgttgcttggtcaataagataagg 12039156  T
Q  141 aaatactgtttccttacacaataaagggcgcgcgtata--ta----------cagacacactaaaccgtgcctggatgttggaacatcatatccaacatc 228  Q
    ||||| |||||||  | ||||||||||||||||||| |  ||          |||||||||| |||||||||  |||||||||||||   ||||||||||    
T  12039155 aaatattgtttcc--aaacaataaagggcgcgcgtaaaagtaggcatgaacccagacacactgaaccgtgccaagatgttggaacattgcatccaacatc 12039058  T
Q  229 ttacagagacgcctaaacacatgttgaaacatt 261  Q
    ||||||||| |||||||||||||||| ||||||    
T  12039057 ttacagagatgcctaaacacatgttggaacatt 12039025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 35 - 172
Target Start/End: Complemental strand, 17527437 - 17527300
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||||||||| |||||||||| |||||||||| ||  |||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||    
T  17527437 cgttccaaacaatattaaatatttcttaaaatataaaatacactttagaaatatttcacagttgattcttagatgatatgcgcgttgcttgatcaataag 17527338  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcg 172  Q
     |||||||||| ||||| |||| |||||||||||||||    
T  17527337 ttaaggaaatattgtttacttaaacaataaagggcgcg 17527300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 35 - 272
Target Start/End: Complemental strand, 19894223 - 19893972
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattctta--gaagatatgcgcgttgcttgatcaata 132  Q
    ||||| |||||||||||||||||| ||| ||| ||| ||  ||||||||||||||||||| ||  ||||||  |||||||||||||||||||||||||||    
T  19894223 cgttcaaaacaataataaatattttctataatgtaaaatacactttagaaatattccacaactctttcttatagaagatatgcgcgttgcttgatcaata 19894124  T
Q  133 agataaggaaatactgtttccttacacaataaagggcgcgcgta------------tatacagacacactaaaccgtgcctggatgttggaacatcatat 220  Q
    || |||||||||| ||||||||||  ||||||||| || ||| |             || ||| |||||| |||||||||  ||||||||| |||| |||    
T  19894123 agttaaggaaatattgtttccttaagcaataaaggtcgtgcgcacaaaaaggcgagaattcaggcacactgaaccgtgccaagatgttggagcatcgtat 19894024  T
Q  221 ccaacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    |||||||||| |||||| |||||||||||||||||| | |||||||||||||    
T  19894023 ccaacatcttccagagatgcctaaacacatgttgaatctttggttccaactt 19893972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 74 - 272
Target Start/End: Complemental strand, 8465181 - 8464971
Alignment:
Q  74 ctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagataaggaaatactgtttccttacacaataaagggcgcgc 173  Q
    ||||||||||| |||||||||| ||||||     |||||||||||||||||| |||||||||||||||| || ||||| |||| ||||||||||||||||    
T  8465181 ctactttagaagtattccacagttgattccgtatagatatgcgcgttgcttggtcaataagataaggaactattgttttcttaaacaataaagggcgcgc 8465082  T
Q  174 gtata--ta----------cagacacactaaaccgtgcctggatgttggaacatcatatccaacatcttacagagacgcctaaacacatgttgaaacatt 261  Q
    ||| |  ||          ||| |||||||||||||||| ||||||||||||||  |||||||||||||| | ||| |||||||||||||||| ||||||    
T  8465081 gtacaagtaggaatgaacccaggcacactaaaccgtgccaggatgttggaacattgtatccaacatcttaaaaagaggcctaaacacatgttggaacatt 8464982  T
Q  262 ggttccaactt 272  Q
    |||||||||||    
T  8464981 ggttccaactt 8464971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 41 - 270
Target Start/End: Complemental strand, 17864021 - 17863780
Alignment:
Q  41 aaacaataataaatatttcctaaaatataa-tatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagataag 139  Q
    ||||||||| |||||||| ||||||||||| ||| |||||||||||||||||||| |||| | |   |||||||| |||||| ||| |||||||||||||    
T  17864021 aaacaataacaaatattttctaaaatataaatat-tactttagaaatattccacaactgagtatgtaaagatatgtgcgttgtttggtcaataagataag 17863923  T
Q  140 gaaatactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatccaacat 227  Q
    |||||| |||||||||| |||||||||||||| |||| | |            ||| ||  || ||||||||   ||||||  |||||||||||| ||||    
T  17863922 gaaatattgtttccttaaacaataaagggcgcacgtacaaataggcatgaacccaggcagtctgaaccgtgctacgatgttaaaacatcatatccgacat 17863823  T
Q  228 cttacagagacgcctaaacacatgttgaaacattggttccaac 270  Q
    |||||||||| |||||||||||||||| |||||||||||||||    
T  17863822 cttacagagatgcctaaacacatgttggaacattggttccaac 17863780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 35 - 175
Target Start/End: Complemental strand, 12028696 - 12028556
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||  |||||| |||||||| | ||||||||| ||||||||||||||||||||||||||||||||    ||||||||| ||||||||  ||||| |    
T  12028696 cgttccagccaataacaaatatttgccaaaatataaaatctactttagaaatattccacagctgattctgtatagatatgcgtgttgcttggacaatagg 12028597  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgt 175  Q
    ||||||||||| |||||||||| ||||||||||||| ||||    
T  12028596 ataaggaaatattgtttccttaaacaataaagggcgtgcgt 12028556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 41 - 246
Target Start/End: Original strand, 25806020 - 25806236
Alignment:
Q  41 aaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattct-tagaagatatgcgcgttgcttgatcaataagataag 139  Q
    |||||||| ||||||| |||||||||||||   |||||||| ||||||||| ||  ||||||| |||| ||||||||||||||||| |||||||||||||    
T  25806020 aaacaatattaaatatctcctaaaatataaatgctactttaaaaatattcctcaattgattctgtaga-gatatgcgcgttgcttggtcaataagataag 25806118  T
Q  140 gaaatactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatccaacat 227  Q
    |||||| |||||||||  ||||| || ||| | |||| |||            |||||||||| ||||||||| ||||||||||||||| ||||||||||    
T  25806119 gaaatattgtttccttcaacaatgaatggcacccgtacatacaggcatgaacccagacacactgaaccgtgccaggatgttggaacatcgtatccaacat 25806218  T
Q  228 cttacagagacgcctaaac 246  Q
    |||| ||||| ||||||||    
T  25806219 ctta-agagatgcctaaac 25806236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 51 - 156
Target Start/End: Complemental strand, 23882235 - 23882130
Alignment:
Q  51 aaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagataaggaaatactgtt 150  Q
    |||||||||||||||||||||  |  |||||| ||||||||||| ||||||||   ||||||||||||||||||| |||||||||||||||||||  |||    
T  23882235 aaatatttcctaaaatataatcacatctttaggaatattccacaactgattctataaagatatgcgcgttgcttggtcaataagataaggaaatatggtt 23882136  T
Q  151 tcctta 156  Q
    ||||||    
T  23882135 tcctta 23882130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 51 - 156
Target Start/End: Complemental strand, 29253219 - 29253114
Alignment:
Q  51 aaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagataaggaaatactgtt 150  Q
    |||||||||||||||||||||  ||||||||| ||||||||||| |||||  |   ||||||||||||||||||| ||||||||||||| |||||| |||    
T  29253219 aaatatttcctaaaatataatcactactttaggaatattccacaactgatcatgtaaagatatgcgcgttgcttggtcaataagataagaaaatacggtt 29253120  T
Q  151 tcctta 156  Q
    ||||||    
T  29253119 tcctta 29253114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 185 - 272
Target Start/End: Original strand, 19168214 - 19168301
Alignment:
Q  185 cacactaaaccgtgcctggatgttggaacatcatatccaacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    |||||||||||||||| |||||||||| |||| || |||||||  || ||||| |||||||||||||||| |||||||||||||||||    
T  19168214 cacactaaaccgtgccaggatgttggagcatcgtacccaacattctatagagatgcctaaacacatgttggaacattggttccaactt 19168301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 12385249 - 12385173
Alignment:
Q  185 cacactaaaccgtgcctggatgttggaacatcatatccaacatcttacagagacgcctaaacacatgttgaaacattg 262  Q
    |||||| ||||||||| ||||||||||||||| |||||||||||||||||||| ||||||| |||||||| |||||||    
T  12385249 cacactgaaccgtgccaggatgttggaacatcgtatccaacatcttacagagatgcctaaa-acatgttggaacattg 12385173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 272
Target Start/End: Complemental strand, 11992412 - 11992325
Alignment:
Q  185 cacactaaaccgtgcctggatgttggaacatcatatccaacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    |||||| || |||||  |||||||| |||||  |||||||||||||||||||  | |||| ||||||||| |||||||||||||||||    
T  11992412 cacactgaatcgtgctaggatgttgaaacattgtatccaacatcttacagagttgtctaaccacatgttggaacattggttccaactt 11992325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 182 - 228
Target Start/End: Original strand, 11961234 - 11961280
Alignment:
Q  182 agacacactaaaccgtgcctggatgttggaacatcatatccaacatc 228  Q
    ||||||||||||||||||| ||||||||||||||| |||||||||||    
T  11961234 agacacactaaaccgtgccaggatgttggaacatcgtatccaacatc 11961280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 242
Target Start/End: Complemental strand, 15930239 - 15930182
Alignment:
Q  185 cacactaaaccgtgcctggatgttggaacatcatatccaacatcttacagagacgcct 242  Q
    |||||| ||||||||| ||||||||||||||| ||||||| |||||||||||| ||||    
T  15930239 cacactgaaccgtgccaggatgttggaacatcgtatccaatatcttacagagatgcct 15930182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 242
Target Start/End: Original strand, 19598449 - 19598506
Alignment:
Q  185 cacactaaaccgtgcctggatgttggaacatcatatccaacatcttacagagacgcct 242  Q
    |||||| ||||||| | ||||||||||||||| |||||||||||||||||||| ||||    
T  19598449 cacactgaaccgtgtcaggatgttggaacatcgtatccaacatcttacagagatgcct 19598506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 185 - 245
Target Start/End: Complemental strand, 23882089 - 23882029
Alignment:
Q  185 cacactaaaccgtgcctggatgttggaacatcatatccaacatcttacagagacgcctaaa 245  Q
    |||||| ||||||| | ||||||||||||||| |||||||||||||||| ||| |||||||    
T  23882089 cacactgaaccgtgtcaggatgttggaacatcgtatccaacatcttacaaagatgcctaaa 23882029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 251
Target Start/End: Original strand, 19172189 - 19172248
Alignment:
Q  192 aaccgtgcctggatgttggaacatcatatccaacatcttacagagacgcctaaacacatg 251  Q
    ||||||||| |||||||||| ||||||| ||||||||||| ||||| || ||||||||||    
T  19172189 aaccgtgccaggatgttggagcatcatacccaacatcttatagagatgcataaacacatg 19172248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 19100676 - 19100730
Alignment:
Q  218 tatccaacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    |||||||||||||| ||||| |||||||||||||||| ||| ||| |||||||||    
T  19100676 tatccaacatcttatagagatgcctaaacacatgttggaactttgattccaactt 19100730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 270
Target Start/End: Complemental strand, 29253072 - 29252985
Alignment:
Q  185 cacactaaaccgtgcctggatgttggaaca---tcatatccaacatcttacagagacgcctaaacacatgttgaaacattggttccaac 270  Q
    |||||| ||||||||| |||||||||||||   || |||||||||||||| ||| | |||| ||| ||||||| |||||||||||||||    
T  29253072 cacactgaaccgtgccaggatgttggaacatcgtcgtatccaacatcttaaagacatgcctgaac-catgttggaacattggttccaac 29252985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 156
Target Start/End: Complemental strand, 15930329 - 15930280
Alignment:
Q  107 aagatatgcgcgttgcttgatcaataagataaggaaatactgtttcctta 156  Q
    |||||||| |||||||||| |||||||||||||||||||  |||||||||    
T  15930329 aagatatgtgcgttgcttggtcaataagataaggaaatatggtttcctta 15930280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 70
Target Start/End: Original strand, 25969946 - 25969981
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataa 70  Q
    |||||||||||||||||||||||| |||||||||||    
T  25969946 cgttccaaacaataataaatatttactaaaatataa 25969981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 70
Target Start/End: Original strand, 25974386 - 25974421
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataa 70  Q
    |||||||||||||||||||||||| |||||||||||    
T  25974386 cgttccaaacaataataaatatttactaaaatataa 25974421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 24542425 - 24542470
Alignment:
Q  188 actaaaccgtgcctggatgttggaacatcatatccaacatcttaca 233  Q
    ||||||||||||| | ||||||||||||| ||||||||||| ||||    
T  24542425 actaaaccgtgccagaatgttggaacatcgtatccaacatcataca 24542470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 19658687 - 19658731
Alignment:
Q  185 cacactaaaccgtgcctggatgttggaacatcatatccaacatct 229  Q
    |||||| || |||||  ||||||||||||||||||||||||||||    
T  19658687 cacactgaatcgtgctaggatgttggaacatcatatccaacatct 19658731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 233
Target Start/End: Complemental strand, 21316972 - 21316936
Alignment:
Q  197 tgcctggatgttggaacatcatatccaacatcttaca 233  Q
    |||| ||||||||||||||||||||||||||| ||||    
T  21316972 tgccaggatgttggaacatcatatccaacatcataca 21316936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 24542333 - 24542381
Alignment:
Q  108 agatatgcgcgttgcttgatcaataagataaggaaatactgtttcctta 156  Q
    ||||||||| |||| ||| |||||||||||||||||||  |||||||||    
T  24542333 agatatgcgtgttggttggtcaataagataaggaaatatggtttcctta 24542381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 229
Target Start/End: Complemental strand, 26964944 - 26964900
Alignment:
Q  185 cacactaaaccgtgcctggatgttggaacatcatatccaacatct 229  Q
    |||||| ||||||| | | ||||||||||||||||||||||||||    
T  26964944 cacactgaaccgtgtcagaatgttggaacatcatatccaacatct 26964900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 143; Significance: 4e-75; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 35 - 270
Target Start/End: Complemental strand, 23420110 - 23419863
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  23420110 cgttccaaccaataataaatatttcctaaaatataaaaactactttagaaatattccacaactgattcttagaagatatgcgcattgcttgatcaataag 23420011  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
    ||||||||||| ||||||||||  |||||||||||||||||| |||            |||||||| | ||||||||| |||||||||| |||  |||||    
T  23420010 ataaggaaatattgtttccttaaccaataaagggcgcgcgtacatacatgcgagaactcagacacattgaaccgtgccaggatgttggagcattgtatcc 23419911  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttccaac 270  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||    
T  23419910 aacatcttacagagacgcctaaacacatgttgaaacattggtaccaac 23419863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 35 - 272
Target Start/End: Complemental strand, 22251594 - 22251345
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    ||||| |||||||| ||||||||||||||||||||| ||  |||||||||||||||||||||| |||||| || ||||||||||||||||||| ||||||    
T  22251594 cgttcaaaacaatattaaatatttcctaaaatataaaatacactttagaaatattccacagctaattcttggatgatatgcgcgttgcttgattaataag 22251495  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
     ||||||||||||||||||||| || |||||||||||||||| | |            ||| |||||| ||||||||| |||||||||| |||| |||||    
T  22251494 ttaaggaaatactgtttccttaaacgataaagggcgcgcgtacaaacaggcgagaactcaggcacactgaaccgtgccaggatgttggagcatcgtatcc 22251395  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    |||||||| || |||||||||||||||||||||||| |||||||||||||    
T  22251394 aacatctttcaaagacgcctaaacacatgttgaaactttggttccaactt 22251345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 35 - 272
Target Start/End: Complemental strand, 22404314 - 22404065
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||||||||||||||||||||||||||||||| ||  |||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||||||    
T  22404314 cgttccaaacaataataaatatttcctaaaatataaaatacactttagaaatatttcacagttgattcttagaagatatgcgctttgcttgatcaataag 22404215  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
     |||||||||| |||||||||| ||||||| |||||| |||| | |            |||||| ||| |||| |||| ||||||||||||||  |||||    
T  22404214 ctaaggaaatattgtttccttaaacaataacgggcgcacgtacaaacatgcgagaaatcagacatactgaaccatgccaggatgttggaacattgtatcc 22404115  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    |||||||| ||||||||||||||||||||||| ||| |||||||||||||    
T  22404114 aacatcttccagagacgcctaaacacatgttggaactttggttccaactt 22404065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 35 - 271
Target Start/End: Complemental strand, 23757810 - 23757562
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||   |||||||| | |||||||| ||||||      
T  23757810 cgttccaaccaataacaaatatttcctaaaatataaaatctactttagaaatattccacagctaattctccaaagatatgtgtgttgcttggtcaataca 23757711  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgta----tatac--------agacacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
    ||||||||||| |||||||||| ||||||||||| |||||||    ||| |        ||||||||| || |||||| ||||||||||||||| |||||    
T  23757710 ataaggaaatattgtttccttaaacaataaagggtgcgcgtacatgtatgcatgaacctagacacactgaatcgtgccaggatgttggaacatcgtatcc 23757611  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttccaact 271  Q
    |||||| || ||||| |||||||||||||||| ||||||||||||||||    
T  23757610 aacatcatatagagatgcctaaacacatgttggaacattggttccaact 23757562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 35 - 271
Target Start/End: Complemental strand, 23823266 - 23823018
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||   |||||||| | |||||||| ||||||      
T  23823266 cgttccaaccaataacaaatatttcctaaaatataaaatctactttagaaatattccacagctaattctccaaagatatgtgtgttgcttggtcaataca 23823167  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgta----tatac--------agacacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
    ||||||||||| |||||||||| ||||||||||| |||||||    ||| |        ||||||||| || |||||| ||||||||||||||| |||||    
T  23823166 ataaggaaatattgtttccttaaacaataaagggtgcgcgtacatgtatgcatgaacctagacacactgaatcgtgccaggatgttggaacatcgtatcc 23823067  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttccaact 271  Q
    |||||| || ||||| |||||||||||||||| ||||||||||||||||    
T  23823066 aacatcatatagagatgcctaaacacatgttggaacattggttccaact 23823018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 35 - 176
Target Start/End: Complemental strand, 9422069 - 9421928
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||| ||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||    
T  9422069 cgttccaaccaataataaatatttcctaaaatataaaatctaatttagaaatatttcacagctgattcttagaagatatgcgtattgcttgatcaataag 9421970  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgta 176  Q
    ||||||||||| |||||||||| ||||||| |||||||||||    
T  9421969 ataaggaaatattgtttccttaaacaataaggggcgcgcgta 9421928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 35 - 272
Target Start/End: Original strand, 24190469 - 24190718
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    ||||||||| |||| ||||||||||||||||||||| ||  ||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||| |    
T  24190469 cgttccaaaaaatattaaatatttcctaaaatataaaatacactttagaaatattctacagctgattcttagatgatatgcgcgttacttgatcaatatg 24190568  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
    ||||||||||| |||||||||| ||||||| ||||||||||| | |            ||  |||||| ||||||||| | |||||||| |||| |||||    
T  24190569 ataaggaaatattgtttccttaaacaataaggggcgcgcgtacaaataggcgagaactcaagcacactgaaccgtgccagaatgttggagcatcgtatcc 24190668  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    |||||||| || |||||||||||||||||||| ||| || ||||||||||    
T  24190669 aacatcttccaaagacgcctaaacacatgttggaactttagttccaactt 24190718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 41 - 270
Target Start/End: Original strand, 26037390 - 26037630
Alignment:
Q  41 aaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagataagg 140  Q
    ||||||||| ||||||||||||||||||||   ||||||||| ||||||||||| |||||| |   ||||||||||||||||||| |||||| |||||||    
T  26037390 aaacaataacaaatatttcctaaaatataaatactactttaggaatattccacaactgattttgtaaagatatgcgcgttgcttggtcaataggataagg 26037489  T
Q  141 aaatactgtttccttacacaataaagggcgcgcg---tatatac--------agacacactaaaccgtgcctggatgttggaacatcatatccaacatct 229  Q
    ||||| |||||||||| ||||||||||| |||||    |||| |        || |||||| |||| |||| ||||||||||||||| ||||| ||||||    
T  26037490 aaatattgtttccttaaacaataaagggtgcgcgccaaatatgcatgaaccgaggcacactgaaccatgccaggatgttggaacatcgtatccgacatct 26037589  T
Q  230 tacagagacgcctaaacacatgttgaaacattggttccaac 270  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  26037590 tacagagatgcctaaacacatgttgaaacattggttccaac 26037630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 35 - 172
Target Start/End: Complemental strand, 22245912 - 22245775
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||||||||| ||||||||||||||||||||| ||  ||||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||    
T  22245912 cgttccaaacaatattaaatatttcctaaaatataaaatacactttagaaatattccatagttgattcttagatgatatgcgcgttgcttgatcaataag 22245813  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcg 172  Q
     |||||||||  |||||||||| | ||||||| |||||    
T  22245812 ttaaggaaattatgtttccttaaagaataaagtgcgcg 22245775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 51 - 237
Target Start/End: Complemental strand, 30605228 - 30605030
Alignment:
Q  51 aaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagataaggaaatactgtt 150  Q
    ||||||||||||||||||||   | ||||||| ||||||||||| ||||||||   ||||||||||||||||||||||||||||||||||||||| ||||    
T  30605228 aaatatttcctaaaatataaacacaactttaggaatattccacaactgattctgtaaagatatgcgcgttgcttgatcaataagataaggaaatattgtt 30605129  T
Q  151 tccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatccaacatcttacagaga 237  Q
    |||||| |||||||||||||| |||| | |            ||| |||||| ||||||||| ||||||||||||||| ||||||||||||||||||||    
T  30605128 tccttaaacaataaagggcgcccgtacaaataagcatgaactcaggcacactgaaccgtgccaggatgttggaacatcgtatccaacatcttacagaga 30605030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 41 - 270
Target Start/End: Original strand, 38405973 - 38406213
Alignment:
Q  41 aaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagataagg 140  Q
    ||||||||| ||||||||||||||||||||    |||||||| ||||||||||| ||||||||   ||||||| ||||||||||| ||||||||||||||    
T  38405973 aaacaataaaaaatatttcctaaaatataaacattactttaggaatattccacaactgattctgtaaagatatacgcgttgcttggtcaataagataagg 38406072  T
Q  141 aaatactgtttccttacacaataaagggcgcgcgtatataca------------gacacactaaaccgtgcctggatgttggaacatcatatccaacatc 228  Q
    ||||| |||||||||| |||||||||||| |||||| | |||            | |||||| ||||||||  ||||| ||||||||| |||||||||||    
T  38406073 aaatattgtttccttaaacaataaagggcacgcgtacaaacaagcaagatacagggcacactgaaccgtgctaggatgctggaacatcgtatccaacatc 38406172  T
Q  229 ttacagagacgcctaaacacatgttgaaacattggttccaac 270  Q
    ||| ||| | |||| ||  ||||||| |||||||||||||||    
T  38406173 ttatagacatgcctgaa-tcatgttggaacattggttccaac 38406213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 41 - 242
Target Start/End: Complemental strand, 22082238 - 22082025
Alignment:
Q  41 aaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagataagg 140  Q
    ||||||||| ||||||||||||||||||||   ||||||||| ||||||||||| |||||| |   || ||||| ||||| |||| ||||||||||| ||    
T  22082238 aaacaataacaaatatttcctaaaatataaacactactttaggaatattccacaactgattatgtaaatatatgtgcgttccttggtcaataagataggg 22082139  T
Q  141 aaatactgtttccttacacaataaagggcgcgcgtatataca-----ga-------cacactaaaccgtgcctggatgttggaacatcatatccaacatc 228  Q
    ||||| |||||||||| |||||||||||||| |||| | |||     ||       |||||| ||||||||| ||||||||||||||| |||||||||||    
T  22082138 aaatattgtttccttaaacaataaagggcgcacgtacaaacatgcatgaactcaagcacactgaaccgtgccaggatgttggaacatcgtatccaacatc 22082039  T
Q  229 ttacagagacgcct 242  Q
    ||||||||| ||||    
T  22082038 ttacagagatgcct 22082025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 51 - 156
Target Start/End: Original strand, 18221731 - 18221836
Alignment:
Q  51 aaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagataaggaaatactgtt 150  Q
    |||||||| ||||||||||||  | ||||||| |||||| |||| ||||| ||   |||||||| | ||||||||||||||||||||||||||||| |||    
T  18221731 aaatattttctaaaatataatcacaactttaggaatattacacaactgatcctgtaaagatatgtgtgttgcttgatcaataagataaggaaatacggtt 18221830  T
Q  151 tcctta 156  Q
    ||||||    
T  18221831 tcctta 18221836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 35 - 100
Target Start/End: Complemental strand, 25105013 - 25104948
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgat 100  Q
    |||||||||||||| ||||||||||||||||||||| ||  ||||||||||||||| | |||||||    
T  25105013 cgttccaaacaatattaaatatttcctaaaatataaaatacactttagaaatattctagagctgat 25104948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 35 - 100
Target Start/End: Complemental strand, 25164106 - 25164041
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgat 100  Q
    |||||||||||||| ||||||||||||||||||||| ||  ||||||||||||||| | |||||||    
T  25164106 cgttccaaacaatattaaatatttcctaaaatataaaatacactttagaaatattctagagctgat 25164041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 272
Target Start/End: Complemental strand, 22240341 - 22240282
Alignment:
Q  213 catcatatccaacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    |||| ||| ||||||||| ||||||| ||||||||||||||||||| |||||||||||||    
T  22240341 catcgtattcaacatctttcagagacacctaaacacatgttgaaactttggttccaactt 22240282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 23624609 - 23624659
Alignment:
Q  185 cacactaaaccgtgcctggatgttggaacatcatatccaacatcttacaga 235  Q
    |||||| ||||||||| ||||||||||||||| ||||||||||||||||||    
T  23624609 cacactgaaccgtgccaggatgttggaacatcgtatccaacatcttacaga 23624659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 143
Target Start/End: Complemental strand, 26328762 - 26328660
Alignment:
Q  41 aaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagataagg 140  Q
    |||||| | ||||||||| ||||||||||||  | ||||||| |||||| |||| ||||||||   |||||||| ||||| |||| |||| |||||||||    
T  26328762 aaacaacattaaatattttctaaaatataatcacaactttaggaatattacacaactgattctataaagatatgtgcgttacttggtcaacaagataagg 26328663  T
Q  141 aaa 143  Q
    |||    
T  26328662 aaa 26328660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 272
Target Start/End: Complemental strand, 9420712 - 9420659
Alignment:
Q  219 atccaacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    ||||||||||||||||||| |||||||||||||||| ||| || ||||||||||    
T  9420712 atccaacatcttacagagatgcctaaacacatgttggaactttagttccaactt 9420659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 260
Target Start/End: Complemental strand, 20714134 - 20714060
Alignment:
Q  185 cacactaaaccgtgcctggatgttggaacatcatatccaacatcttacagagacgcctaaacacatgttgaaacat 260  Q
    ||||||||||||| || ||||||||||||||| |||| ||||||||| ||||| |||| || |||||||| |||||    
T  20714134 cacactaaaccgttccaggatgttggaacatcgtatctaacatcttatagagatgcctgaa-acatgttggaacat 20714060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 260
Target Start/End: Complemental strand, 13941389 - 13941332
Alignment:
Q  202 ggatgttggaacatcatatccaacatcttacagagacgcctaaacacatgttgaaacat 260  Q
    |||||||||||||||||||||||||||||||| | | ||||||| |||||||| |||||    
T  13941389 ggatgttggaacatcatatccaacatcttacaaaaatgcctaaa-acatgttggaacat 13941332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 233
Target Start/End: Original strand, 18221896 - 18221926
Alignment:
Q  203 gatgttggaacatcatatccaacatcttaca 233  Q
    |||||||||||||||||||||||||||||||    
T  18221896 gatgttggaacatcatatccaacatcttaca 18221926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 24118307 - 24118357
Alignment:
Q  183 gacacactaaaccgtgcctggatgttggaacatcatatccaacatcttaca 233  Q
    |||||||| |||||||||  |||||||||||| ||||||||||||| ||||    
T  24118307 gacacactgaaccgtgccaagatgttggaacagcatatccaacatcataca 24118357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 17732202 - 17732165
Alignment:
Q  1 atattagttaaatttgtaggcatatgtactttgccgtt 38  Q
    |||||||| | |||||||||||||||||||||||||||    
T  17732202 atattagtcatatttgtaggcatatgtactttgccgtt 17732165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 28040934 - 28040971
Alignment:
Q  1 atattagttaaatttgtaggcatatgtactttgccgtt 38  Q
    |||||||| | |||||||||||||||||||||||||||    
T  28040934 atattagtcatatttgtaggcatatgtactttgccgtt 28040971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 26328590 - 26328523
Alignment:
Q  202 ggatgttggaacatcatatccaacatcttacagagacgcctaaacacatgttgaaacattggttccaac 270  Q
    ||||||||||||||| |||||||||||| ||| |||  |||  | |||||||| |||||||||||||||    
T  26328590 ggatgttggaacatcgtatccaacatctcacatagatacctgta-acatgttggaacattggttccaac 26328523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 137; Significance: 1e-71; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 35 - 272
Target Start/End: Complemental strand, 33898562 - 33898313
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33898562 cgttccaaacaataataaatatttcctaaaatataaaatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 33898463  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
     |||||||||| |||||||||| ||||||||||||||||||| |||            ||| || ||| |||||| |  |||||||||| |||| ||||     
T  33898462 ttaaggaaatattgtttccttaaacaataaagggcgcgcgtacatacaggcgagaacgcaggcatactgaaccgtacgaggatgttggagcatcgtatct 33898363  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||    
T  33898362 aacatcttccaaagacgcctaaacacatgttgaaacattggttccaactt 33898313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 35 - 272
Target Start/End: Original strand, 16384496 - 16384745
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||    
T  16384496 cgttccaaacaataataaatatttcctaaaatataaaatacactttagaaatattccacaactgattcttagaagatatgcgtgttgtttgatcaataag 16384595  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
     |||||||||| |||||||||| ||||||||||||||||||| | |            ||| |||||| ||| ||| | |||||||||| |||| |||||    
T  16384596 ttaaggaaatattgtttccttaaacaataaagggcgcgcgtacaaacaggcgagaacccaggcacactgaactgtgtcaggatgttggagcatcgtatcc 16384695  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    |||||||| ||||||||||||||||||||||| |||||||||| ||||||    
T  16384696 aacatcttccagagacgcctaaacacatgttggaacattggtttcaactt 16384745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 35 - 272
Target Start/End: Complemental strand, 23399749 - 23399500
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||||||||| ||||||||||||||||||||| ||  ||||||||||||||| ||||||||||||||||  ||||| |||||||||||||||||||    
T  23399749 cgttccaaacaatattaaatatttcctaaaatataaaatacactttagaaatattctacagctgattcttagataatatgtgcgttgcttgatcaataag 23399650  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
     |||||||||| |||||||||| | ||||||||||||||||| | |            ||| |||||||||||||||| |||||||| | ||||  ||||    
T  23399649 ttaaggaaatattgtttccttaaataataaagggcgcgcgtacaaacaagcgagaactcaggcacactaaaccgtgccaggatgttgaagcatcgcatcc 23399550  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  23399549 aacatcttccagagacgcctaaacacatgttgaaactttggttccaactt 23399500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 35 - 272
Target Start/End: Complemental strand, 18601213 - 18600964
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||| ||||| ||||||||||||||||||| ||||| ||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18601213 cgtttcaaactataataaatatttcctaaagtataaaatacactttagaaatatttcacagctgattcttagaagatatgcgcgttgcttgatcaataag 18601114  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgc------------gcgtatatacagacacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
     |||| ||||| |||||||||| ||||||||||||||            |||   |  ||| |||||| ||||||||| |||||||||| |||| |||||    
T  18601113 ttaagtaaatattgtttccttaaacaataaagggcgcacatacaaccaggcgagaactcaggcacactgaaccgtgccaggatgttggagcatcgtatcc 18601014  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||    
T  18601013 aacatcttccacagacgcctaaacacatgttgaaacattggttccaactt 18600964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 35 - 272
Target Start/End: Original strand, 28019909 - 28020158
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||||||||| ||||||||||||||||||||| ||  ||||||||||||||  | |||||||||||||| ||||||| ||||||||||||||||||    
T  28019909 cgttccaaacaatattaaatatttcctaaaatataaaatacactttagaaatattttatagctgattcttagatgatatgcacgttgcttgatcaataag 28020008  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtatataca---ga---------cacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
     ||| |||||| | |||||||| |||||||||||| |||| | | |||   ||         |||||| ||||||||| |||||||| | ||||| ||||    
T  28020009 ttaaagaaatattatttccttaaacaataaagggctcgcgaacaaacatgtgagaactcattcacactgaaccgtgccaggatgttgaagcatcacatcc 28020108  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    |||||||| ||||||||||||||||||||||||||| ||| |||||||||    
T  28020109 aacatcttccagagacgcctaaacacatgttgaaactttgattccaactt 28020158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 35 - 272
Target Start/End: Original strand, 25117462 - 25117711
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    ||||||||| |||| ||| |||||| |||||||||| ||  ||||||||||||||||| ||| |||||||||| ||||||   |||||||||||||||||    
T  25117462 cgttccaaaaaatattaagtatttcttaaaatataaaatacactttagaaatattccaaagccgattcttagatgatatgaatgttgcttgatcaataag 25117561  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtatatacag------acaca------ctaaaccgtgcctggatgttggaacatcatatcc 222  Q
     |||||||||| |||||||||| ||||||||| ||||||||| | | ||      || ||      || || |||||| |||||||||| |||| |||||    
T  25117562 ttaaggaaatattgtttccttaaacaataaagagcgcgcgtacaaataggcgagaactcatgcaacctgaagcgtgccaggatgttggagcatcgtatcc 25117661  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    |||||||| |||||||||||||| |||||||||||| |||||||||||||    
T  25117662 aacatcttccagagacgcctaaatacatgttgaaactttggttccaactt 25117711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 39 - 172
Target Start/End: Complemental strand, 15162033 - 15161900
Alignment:
Q  39 ccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagataa 138  Q
    |||| |||||| ||||||||||||||||||||   ||||||||||||||||||||||||||||||   |||||||| |||||||||| ||||||||||||    
T  15162033 ccaaccaataacaaatatttcctaaaatataaatactactttagaaatattccacagctgattctgtaaagatatgtgcgttgcttggtcaataagataa 15161934  T
Q  139 ggaaatactgtttccttacacaataaagggcgcg 172  Q
    ||||||| |||||||||| |||||||||||||||    
T  15161933 ggaaatattgtttccttaaacaataaagggcgcg 15161900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 185 - 270
Target Start/End: Original strand, 10724965 - 10725050
Alignment:
Q  185 cacactaaaccgtgcctggatgttggaacatcatatccaacatcttacagagacgcctaaacacatgttgaaacattggttccaac 270  Q
    |||||||||| ||||| ||||||||||||||| |||||||||||||||||||| ||||| ||| |||||| |||||||||||||||    
T  10724965 cacactaaactgtgccaggatgttggaacatcgtatccaacatcttacagagatgcctacacatatgttggaacattggttccaac 10725050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 185 - 270
Target Start/End: Original strand, 10938734 - 10938819
Alignment:
Q  185 cacactaaaccgtgcctggatgttggaacatcatatccaacatcttacagagacgcctaaacacatgttgaaacattggttccaac 270  Q
    |||||||||| ||||| ||||||||||||||| |||||||||||||||||||| ||||| ||| |||||| |||||||||||||||    
T  10938734 cacactaaactgtgccaggatgttggaacatcgtatccaacatcttacagagatgcctacacatatgttggaacattggttccaac 10938819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 210 - 270
Target Start/End: Complemental strand, 15161869 - 15161809
Alignment:
Q  210 gaacatcatatccaacatcttacagagacgcctaaacacatgttgaaacattggttccaac 270  Q
    ||||||| |||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  15161869 gaacatcgtatccaacatcttacagagatgcctaaacacatgttggaacattggttccaac 15161809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 51 - 262
Target Start/End: Complemental strand, 19183221 - 19182997
Alignment:
Q  51 aaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagataaggaaatactgtt 150  Q
    |||||||| ||||||||| ||  |  |||||| |||||| |||| |||||||| | |||||||| |||||| ||| |||| ||||||||||||||  |||    
T  19183221 aaatattttctaaaatatgatcacatctttaggaatattacacaactgattctgaaaagatatgtgcgttgtttggtcaagaagataaggaaatatggtt 19183122  T
Q  151 tccttacacaataaagggcgcgcgtatatacagaca--------------cactaaaccgtgcctggatgttggaacatcatatccaacatcttacagag 236  Q
    |||||| | ||||||| ||||| ||| | | || ||              |||| ||||||||| ||||||  ||||||| |||||||||||||||||||    
T  19183121 tccttaaataataaagagcgcgtgtacaaataggcatgaactcatgcgcacactgaaccgtgccaggatgtcagaacatcgtatccaacatcttacagag 19183022  T
Q  237 acgcctaaacacatgttgaaacattg 262  Q
    | ||||||| |||||||| |||||||    
T  19183021 atgcctaaa-acatgttggaacattg 19182997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 254
Target Start/End: Original strand, 15623211 - 15623272
Alignment:
Q  192 aaccgtgcctggatgttggaacatcatatccaacatcttacagagacgcctaaacacatgttg 254  Q
    ||||||||| ||||||||||||||| |||||||||||||||||| | ||||||| ||||||||    
T  15623211 aaccgtgccaggatgttggaacatcgtatccaacatcttacagaaatgcctaaa-acatgttg 15623272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 156
Target Start/End: Complemental strand, 15699873 - 15699768
Alignment:
Q  51 aaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagataaggaaatactgtt 150  Q
    |||||||||||||||||| |   | ||||||| ||||||||| ||||||||| |  |||||||||| ||| |||| ||||||||||||| | |||  |||    
T  15699873 aaatatttcctaaaatatgaacacaactttaggaatattccaaagctgattcattaaagatatgcgtgtttcttggtcaataagataagaatatatggtt 15699774  T
Q  151 tcctta 156  Q
    ||||||    
T  15699773 tcctta 15699768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 182 - 230
Target Start/End: Original strand, 41786198 - 41786246
Alignment:
Q  182 agacacactaaaccgtgcctggatgttggaacatcatatccaacatctt 230  Q
    ||||| ||| ||||||||| |||||||||||||||||||||||||||||    
T  41786198 agacatactgaaccgtgccaggatgttggaacatcatatccaacatctt 41786246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 9069712 - 9069762
Alignment:
Q  185 cacactaaaccgtgcctggatgttggaacatcatatccaacatcttacaga 235  Q
    |||||| |||||| || ||||||||||||||| ||||||||||||||||||    
T  9069712 cacactgaaccgttccaggatgttggaacatcgtatccaacatcttacaga 9069762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 228
Target Start/End: Complemental strand, 10197639 - 10197596
Alignment:
Q  185 cacactaaaccgtgcctggatgttggaacatcatatccaacatc 228  Q
    |||||| |||||||||  ||||||||||||||||||||||||||    
T  10197639 cacactgaaccgtgccaagatgttggaacatcatatccaacatc 10197596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 227
Target Start/End: Original strand, 10718243 - 10718285
Alignment:
Q  185 cacactaaaccgtgcctggatgttggaacatcatatccaacat 227  Q
    |||||| ||||||||| ||||||||||||||| ||||||||||    
T  10718243 cacactgaaccgtgccaggatgttggaacatcgtatccaacat 10718285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 227
Target Start/End: Original strand, 10932012 - 10932054
Alignment:
Q  185 cacactaaaccgtgcctggatgttggaacatcatatccaacat 227  Q
    |||||| ||||||||| ||||||||||||||| ||||||||||    
T  10932012 cacactgaaccgtgccaggatgttggaacatcgtatccaacat 10932054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 32862412 - 32862456
Alignment:
Q  185 cacactaaaccgtgcctggatgttggaacatcatatccaacatct 229  Q
    |||||| ||||||  | ||||||||||||||||||||||||||||    
T  32862412 cacactgaaccgtatcaggatgttggaacatcatatccaacatct 32862456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 233
Target Start/End: Original strand, 33744235 - 33744287
Alignment:
Q  181 cagacacactaaaccgtgcctggatgttggaacatcatatccaacatcttaca 233  Q
    |||||| ||| ||||||||  ||||||||||||||| ||||||||||| ||||    
T  33744235 cagacagactgaaccgtgctaggatgttggaacatcttatccaacatcataca 33744287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 35 - 272
Target Start/End: Complemental strand, 1921 - 1672
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||||||||||||||||||||| ||||||||| ||  |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1921 cgttccaaacaataataaatatttccaaaaatataaaatacactttataaatattccacagctgattcttagaagatatgcgcgttggttgatcaataag 1822  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
     |||||||||| |||||||||| |||||||||||||||| || | |            ||| |||||| ||||||||| | ||||||||||||| |||||    
T  1821 ttaaggaaatattgtttccttaaacaataaagggcgcgcatacaaataggcgagaactcaggcacactgaaccgtgccagaatgttggaacatcgtatcc 1722  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  1721 aacatcttacaaagacgcctaaacacatgttgaaacattggtttcaactt 1672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 129; Significance: 8e-67; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 35 - 270
Target Start/End: Original strand, 4246642 - 4246893
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccaca--gctgattcttagaagatatgcgcgttgcttgatcaata 132  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||| |||||||||||||||    
T  4246642 cgttccaaccaataataaatatttcctaaaatataaaatctactttagaaatattccacaacgctgattcttagaagatatgcgtgttgcttgatcaata 4246741  T
Q  133 agataaggaaatactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatc--at 218  Q
    ||||||||||||| |||||||||| |||||||||| | |||||| |||            ||| ||||||||||| |||| ||||||||||  |||   |    
T  4246742 agataaggaaatattgtttccttaaacaataaaggacacgcgtacatacaggcgagaactcaggcacactaaaccatgccaggatgttggaggatcgtgt 4246841  T
Q  219 atccaacatcttacagagacgcctaaacacatgttgaaacattggttccaac 270  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  4246842 atccaacatcttacagagacgtctaaacacatgttgaaacattggttccaac 4246893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 36 - 272
Target Start/End: Complemental strand, 26971948 - 26971702
Alignment:
Q  36 gttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataaga 135  Q
    ||||||||||||| ||||||||| ||||||||||| ||  ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||     
T  26971948 gttccaaacaatattaaatattttctaaaatataaaatacactttagaaatattcaacagctgattcttagaagatatgcgcgttgcttgatcaataagt 26971849  T
Q  136 taaggaaatactgtttccttacacaataaagggcgcgcgtatata----------cagacacactaaaccgtgcctggatgttggaacatcatatccaac 225  Q
    |||||||||| |||||||||| ||||||||| |||||   | |||          ||| |||||| ||||||||| |||||||||| |||| ||||||||    
T  26971848 taaggaaatattgtttccttaaacaataaagagcgcgtacaaataggcgagaactcaggcacactgaaccgtgccaggatgttggagcatcgtatccaac 26971749  T
Q  226 atcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    ||||| ||||||||||||||||||||||||||| || ||||||||||    
T  26971748 atcttccagagacgcctaaacacatgttgaaactttagttccaactt 26971702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 35 - 272
Target Start/End: Complemental strand, 20200640 - 20200393
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattc-ttagaagatatgcgcgttgcttgatcaataa 133  Q
    |||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||    
T  20200640 cgttccaaccaataacaaatatttcctaaaatataa-atctactttagaaatattccacaactgattccttaga-gatatgcgcgttgcttgatcaataa 20200543  T
Q  134 gataaggaaatactgtttccttacacaataaagggcgcgcgta------------tatacagacacactaaaccgtgcctggatgttggaacatcatatc 221  Q
    ||| |||||||| |||||||||| |||||||||||||||||||            ||  ||| || ||| ||||||||| ||||||||||||||| ||||    
T  20200542 gat-aggaaatattgtttccttaaacaataaagggcgcgcgtacaagtaggaaagtactcaggcatactgaaccgtgccaggatgttggaacatcgtatc 20200444  T
Q  222 caacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  20200443 caacatcttacagagatgcctaaacacatgttggaacattggttccaactt 20200393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 35 - 272
Target Start/End: Original strand, 13166000 - 13166249
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||| |||||||||||| |||||| |||||||||||||||||||    
T  13166000 cgttccaaacaataataaatatttcctaaaatataaaatacactttagaaatattccacaactgattcttagatgatatgtgcgttgcttgatcaataag 13166099  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
     |||||||||| |||||||||| |||||||||||||||| || |||            ||| |||||| |||||| || |||||||| | ||||  ||||    
T  13166100 ttaaggaaatattgtttccttaaacaataaagggcgcgcttacatacaggcgagaactcaggcacactgaaccgtaccaggatgttgaagcatcgcatcc 13166199  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    |||||||| ||||||||||||||||||||||| ||| |||||||||||||    
T  13166200 aacatcttccagagacgcctaaacacatgttggaactttggttccaactt 13166249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 35 - 272
Target Start/End: Complemental strand, 20840817 - 20840568
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||| ||   |||||||||||||||||||||||||||    
T  20840817 cgttccaaccaataacaaatatttcctaaaatataaaatctactttagaaatattccacaactgattttttatagatatgcgcgttgcttgatcaataag 20840718  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtata--ta----------cagacacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
    ||||||||||| | |||| ||| ||||||||||||||| ||| |  ||          ||| |||||| ||| ||| | ||||||||||||||| |||||    
T  20840717 ataaggaaatattatttcattaaacaataaagggcgcgtgtacaagtaggcaagaactcaggcacactgaactgtgtcaggatgttggaacatcgtatcc 20840618  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    ||||||||||||||| ||||||||| |||||| |||||||||||||||||    
T  20840617 aacatcttacagagatgcctaaacatatgttggaacattggttccaactt 20840568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 41 - 270
Target Start/End: Complemental strand, 11667450 - 11667209
Alignment:
Q  41 aaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagataagg 140  Q
    ||||||||| ||||||||||||||||||||   ||||||||||||||||||||| || |||||   ||||||||||||||||||| ||||||||||||||    
T  11667450 aaacaataacaaatatttcctaaaatataaatactactttagaaatattccacaacttattctgtaaagatatgcgcgttgcttggtcaataagataagg 11667351  T
Q  141 aaatactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatccaacatc 228  Q
    ||||| | |||||||| |||||||||||  |||||| | |            |||||||||| ||| |||||  |||||||||||||| |||||||||||    
T  11667350 aaatagtttttccttaaacaataaagggtccgcgtacaaataggcatgaacccagacacacttaactgtgccatgatgttggaacatcgtatccaacatc 11667251  T
Q  229 ttacagagacgcctaaacacatgttgaaacattggttccaac 270  Q
    ||||||||| | |||||||||||||| |||||||||||||||    
T  11667250 ttacagagatgtctaaacacatgttggaacattggttccaac 11667209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 35 - 270
Target Start/End: Original strand, 24986589 - 24986836
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataa-tatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataa 133  Q
    ||||| |||||| || |||||||||||||||||||| ||| |||||||||||||||||||| |||||| |     ||||||||||||||||| |||||||    
T  24986589 cgttcaaaacaaaaacaaatatttcctaaaatataaatat-tactttagaaatattccacaactgattttgtatggatatgcgcgttgcttggtcaataa 24986687  T
Q  134 gataaggaaatactgtttccttacacaataaagggcgcgcgta--------tat----acagacacactaaaccgtgcctggatgttggaacatcatatc 221  Q
    |||||| ||||| |||||||||| ||||||||||| || | ||        |||    || | |||||| ||||||||| | ||||||||||||  ||||    
T  24986688 gataagaaaatattgtttccttaaacaataaagggtgcacatacaaataggtatgaacacggtcacactgaaccgtgccagaatgttggaacattgtatc 24986787  T
Q  222 caacatcttacagagacgcctaaacacatgttgaaacattggttccaac 270  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||    
T  24986788 caacatcttacagagatgcctaaacacatgttggaacattggttccaac 24986836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 185 - 272
Target Start/End: Original strand, 13150060 - 13150147
Alignment:
Q  185 cacactaaaccgtgcctggatgttggaacatcatatccaacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    |||||| ||||||||| |||||||| | ||||  |||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  13150060 cacactgaaccgtgccaggatgttgaagcatcgcatccaacatcttccagagacgcctaaacacatgttgaaactttggttccaactt 13150147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 185 - 272
Target Start/End: Original strand, 9452174 - 9452261
Alignment:
Q  185 cacactaaaccgtgcctggatgttggaacatcatatccaacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    |||||| ||| ||||| | |||||||| |||| |||||||||||||| |||||||||||||||||||||||||| | |||||||||||    
T  9452174 cacactgaactgtgccagaatgttggagcatcgtatccaacatcttatagagacgcctaaacacatgttgaaacttcggttccaactt 9452261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 51 - 173
Target Start/End: Complemental strand, 15803674 - 15803552
Alignment:
Q  51 aaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagataaggaaatactgtt 150  Q
    |||||||||||||||||||||  |  |||||| ||||||||| | ||||||||   ||||||||||| ||| ||| |||||||||||||||||||  |||    
T  15803674 aaatatttcctaaaatataatcacatctttaggaatattccataactgattctgtaaagatatgcgcattgtttggtcaataagataaggaaatatggtt 15803575  T
Q  151 tccttacacaataaagggcgcgc 173  Q
    |||||| | |||||| |||||||    
T  15803574 tccttaaataataaaaggcgcgc 15803552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 51 - 144
Target Start/End: Complemental strand, 23477472 - 23477379
Alignment:
Q  51 aaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagataaggaaat 144  Q
    |||||||||||||||||||||  | ||||||| |||||||||||  |||| ||   ||||||||| ||||||||| ||||||||||||||||||    
T  23477472 aaatatttcctaaaatataatcacaactttaggaatattccacaattgatcctgtaaagatatgcacgttgcttggtcaataagataaggaaat 23477379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 233
Target Start/End: Complemental strand, 22891293 - 22891144
Alignment:
Q  96 ctgattcttagaagatatgcgcgttgcttgatcaataagataaggaaatactgtttccttacacaataaagggcgcgcgtata--ta----------cag 183  Q
    |||||||||  |||||||| | |||||||| |||||||| |||||||||| |||||||||| |||||||||| |||||||| |  ||          |||    
T  22891293 ctgattcttcaaagatatgtgtgttgcttggtcaataagttaaggaaatattgtttccttaaacaataaaggacgcgcgtacaagtaggcaagaactcag 22891194  T
Q  184 acacactaaaccgtgcctggatgttggaacatcatatccaacatcttaca 233  Q
     |||||| ||||||||| ||||||||||||||  ||||||||| ||||||    
T  22891193 gcacactgaaccgtgccaggatgttggaacatagtatccaacaacttaca 22891144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 156
Target Start/End: Complemental strand, 17850957 - 17850859
Alignment:
Q  58 tcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagataaggaaatactgtttcctta 156  Q
    ||||||||||||||  |  |||||| | |||| |||| ||||||||   |||||||| |||||||||| |||||||||||||||||||  |||||||||    
T  17850957 tcctaaaatataatcacatctttaggagtattacacaactgattctgtaaagatatgggcgttgcttggtcaataagataaggaaatatggtttcctta 17850859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 262
Target Start/End: Complemental strand, 25349620 - 25349544
Alignment:
Q  185 cacactaaaccgtgcctggatgttggaacatcatatccaacatcttacagagacgcctaaacacatgttgaaacattg 262  Q
    |||||| |||| |||| ||||||||||| |||||||||||||||||||| | | ||||||| |||||||| |||||||    
T  25349620 cacactgaaccatgccaggatgttggaatatcatatccaacatcttacataaatgcctaaa-acatgttggaacattg 25349544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 12753739 - 12753787
Alignment:
Q  108 agatatgcgcgttgcttgatcaataagataaggaaatactgtttcctta 156  Q
    |||||||||||||||||| |||||||||||||||||||  |||||||||    
T  12753739 agatatgcgcgttgcttggtcaataagataaggaaatatggtttcctta 12753787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 260
Target Start/End: Complemental strand, 10339550 - 10339476
Alignment:
Q  185 cacactaaaccgtgcctggatgttggaacatcatatccaacatcttacagagacgcctaaacacatgttgaaacat 260  Q
    |||||| ||||||| |  |||||||||||||| |||||||||||||||||| | ||||||| |||||||| |||||    
T  10339550 cacactgaaccgtgtcaagatgttggaacatcgtatccaacatcttacagaaatgcctaaa-acatgttggaacat 10339476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 1626341 - 1626391
Alignment:
Q  185 cacactaaaccgtgcctggatgttggaacatcatatccaacatcttacaga 235  Q
    |||||| ||| || || ||||||||||||||||||||||||||||||||||    
T  1626341 cacactgaactgttccaggatgttggaacatcatatccaacatcttacaga 1626391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 51471482 - 51471434
Alignment:
Q  185 cacactaaaccgtgcctggatgttggaacatcatatccaacatcttaca 233  Q
    |||||| ||||||||| |||||||||||| |||||||||||||| ||||    
T  51471482 cacactgaaccgtgccaggatgttggaacttcatatccaacatcgtaca 51471434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 228
Target Start/End: Original strand, 12753828 - 12753871
Alignment:
Q  185 cacactaaaccgtgcctggatgttggaacatcatatccaacatc 228  Q
    |||||| ||||||||| ||||||||||||||| |||||||||||    
T  12753828 cacactgaaccgtgccaggatgttggaacatcgtatccaacatc 12753871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 3233076 - 3233113
Alignment:
Q  1 atattagttaaatttgtaggcatatgtactttgccgtt 38  Q
    |||||||| | |||||||||||||||||||||||||||    
T  3233076 atattagtcatatttgtaggcatatgtactttgccgtt 3233113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 10627304 - 10627341
Alignment:
Q  1 atattagttaaatttgtaggcatatgtactttgccgtt 38  Q
    |||||||| | |||||||||||||||||||||||||||    
T  10627304 atattagtgatatttgtaggcatatgtactttgccgtt 10627341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 35 - 272
Target Start/End: Original strand, 37196 - 37445
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||||||||||||||||||||||||||  |||||||   ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  37196 cgttccaaacaataataaatatttcctaaaaactaatatcatttttagaaatattccacagctgattcttagaagatatgcgtgttgcttgatcaataag 37295  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
    ||||||||||| |||||||||| |||||||||| ||||| || | |             || |||||| ||||||| | ||||||||||||||  |||||    
T  37296 ataaggaaatattgtttccttaaacaataaaggacgcgcctacaaataggcgagaacttaggcacactgaaccgtgtcaggatgttggaacattgtatcc 37395  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  37396 aacattttacagagacgcctaaacacatgttgaaacattggctccaactt 37445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 125; Significance: 2e-64; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 35 - 272
Target Start/End: Original strand, 12911098 - 12911347
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||||||||||||||||||||||||||||||| ||  |||||||||||||| ||||||||||||||||| |||| |||||||||||||||||||||    
T  12911098 cgttccaaacaataataaatatttcctaaaatataagatacactttagaaatatttcacagctgattcttagatgatacgcgcgttgcttgatcaataag 12911197  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
     |||||||||| | |||||||| ||||||||||||||||||| | |            |||||||||| ||||||| | | |||||| | |||| |||||    
T  12911198 ttaaggaaatattatttccttaaacaataaagggcgcgcgtacaaacaagcgagaactcagacacactgaaccgtgtcagaatgttgaagcatcgtatcc 12911297  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  12911298 aacatcttccagagacgcctaaacacatgttgaaactttggttccaactt 12911347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 35 - 176
Target Start/End: Original strand, 22611497 - 22611638
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||||||||| ||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  22611497 cgttccaaacaatattaaatatttcctaaaatataaaatacactttagaaatattccatagctgattcttagaagatatgcgcgttgcttgatcaataag 22611596  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgta 176  Q
     |||||||||| |||||||||| |||||||||||||||||||    
T  22611597 ttaaggaaatattgtttccttaaacaataaagggcgcgcgta 22611638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 35 - 266
Target Start/End: Original strand, 23759230 - 23759473
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||||||||| ||||||||||||||||||||| ||  ||||||||||||||| ||| |||||||||| | ||||||| ||||||||||||||||||    
T  23759230 cgttccaaacaatattaaatatttcctaaaatataaaatacactttagaaatattctacaactgattcttatatgatatgcacgttgcttgatcaataag 23759329  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
     |||||||||| |||||||||| ||||||||||||||||||| | |            ||| |||| | ||||||| | |||||||| | ||||| ||||    
T  23759330 ttaaggaaatattgtttccttaaacaataaagggcgcgcgtacaaacagttgagaactcaggcacattgaaccgtgacaggatgttgaagcatcacatcc 23759429  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttc 266  Q
    |||||||| || ||||||||||| |||||||||||| |||||||    
T  23759430 aacatcttccaaagacgcctaaatacatgttgaaactttggttc 23759473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 35 - 269
Target Start/End: Complemental strand, 24789712 - 24789466
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||||||||| ||||| ||||||||||||||| ||  ||||||| |||||||||||||||||||||||| |||| || ||||||||| |||||||     
T  24789712 cgttccaaacaatattaaatttttcctaaaatataaaatacactttagtaatattccacagctgattcttagatgataagcacgttgcttggtcaataaa 24789613  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
     ||||||||||   |||||||| ||||||||||||||||||| | |            ||| |||||| ||||||||| |||||||||| |||| |||||    
T  24789612 ttaaggaaatatattttccttaaacaataaagggcgcgcgtacaaacaggcgagaactcaggcacactgaaccgtgccaggatgttggagcatcgtatcc 24789513  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttccaa 269  Q
    |||||||| |||||| |||||||||||||||||||  ||||||||||    
T  24789512 aacatcttccagagatgcctaaacacatgttgaaattttggttccaa 24789466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 185 - 260
Target Start/End: Complemental strand, 21249589 - 21249515
Alignment:
Q  185 cacactaaaccgtgcctggatgttggaacatcatatccaacatcttacagagacgcctaaacacatgttgaaacat 260  Q
    |||||||||||||||| ||||||||||||||| |||||||||||||||||| | |||| || |||||||| |||||    
T  21249589 cacactaaaccgtgccaggatgttggaacatcgtatccaacatcttacagaaatgcctgaa-acatgttggaacat 21249515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 270
Target Start/End: Original strand, 15329095 - 15329172
Alignment:
Q  192 aaccgtgcctggatgttggaacatcatatccaacatcttacagagacgcctaaacacatgttgaaacattggttccaac 270  Q
    ||||||||| ||||||||||||||| |||||||||||||||||| | |||| ||  ||||||| |||||||||||||||    
T  15329095 aaccgtgccaggatgttggaacatcgtatccaacatcttacagacatgcctgaa-tcatgttggaacattggttccaac 15329172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 109 - 156
Target Start/End: Original strand, 15329001 - 15329048
Alignment:
Q  109 gatatgcgcgttgcttgatcaataagataaggaaatactgtttcctta 156  Q
    ||||||||||||||||  ||||||||||||||||||| ||||||||||    
T  15329001 gatatgcgcgttgcttagtcaataagataaggaaatattgtttcctta 15329048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 272
Target Start/End: Original strand, 22614341 - 22614395
Alignment:
Q  218 tatccaacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    ||||||||||||| ||||||| ||||||| ||||||||||| |||||| ||||||    
T  22614341 tatccaacatcttccagagacacctaaacgcatgttgaaactttggtttcaactt 22614395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 228
Target Start/End: Original strand, 27108211 - 27108254
Alignment:
Q  185 cacactaaaccgtgcctggatgttggaacatcatatccaacatc 228  Q
    |||||| ||||||||| ||||||||||||||| |||||||||||    
T  27108211 cacactgaaccgtgccaggatgttggaacatcgtatccaacatc 27108254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 176
Target Start/End: Original strand, 21531071 - 21531125
Alignment:
Q  122 cttgatcaataagataaggaaatactgtttccttacacaataaagggcgcgcgta 176  Q
    |||| |||||||||||||||||||  ||||||||| | |||||| ||||||||||    
T  21531071 cttggtcaataagataaggaaatatggtttccttaaataataaaaggcgcgcgta 21531125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 260
Target Start/End: Original strand, 21531163 - 21531220
Alignment:
Q  202 ggatgttggaacatcatatccaacatcttacagagacgcctaaacacatgttgaaacat 260  Q
    ||||||||||||||  |||||||||||||||||||| |||| || |||||||| |||||    
T  21531163 ggatgttggaacattgtatccaacatcttacagagatgcctgaa-acatgttggaacat 21531220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 34416579 - 34416542
Alignment:
Q  1 atattagttaaatttgtaggcatatgtactttgccgtt 38  Q
    |||||||| | |||||||||||||||||||||||||||    
T  34416579 atattagtcatatttgtaggcatatgtactttgccgtt 34416542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 41797900 - 41797937
Alignment:
Q  1 atattagttaaatttgtaggcatatgtactttgccgtt 38  Q
    |||||||||| |||||||||||||| ||||||||||||    
T  41797900 atattagttatatttgtaggcatatatactttgccgtt 41797937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 233
Target Start/End: Complemental strand, 24311244 - 24311196
Alignment:
Q  185 cacactaaaccgtgcctggatgttggaacatcatatccaacatcttaca 233  Q
    |||||| ||||||||| ||||||||||||||  ||||||||||| ||||    
T  24311244 cacactgaaccgtgccaggatgttggaacattgtatccaacatcataca 24311196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 228
Target Start/End: Original strand, 27111807 - 27111843
Alignment:
Q  192 aaccgtgcctggatgttggaacatcatatccaacatc 228  Q
    ||||||||| ||||||||||||||| |||||||||||    
T  27111807 aaccgtgccaggatgttggaacatcgtatccaacatc 27111843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 36868314 - 36868350
Alignment:
Q  2 tattagttaaatttgtaggcatatgtactttgccgtt 38  Q
    ||||||| | |||||||||||||||||||||||||||    
T  36868314 tattagtcatatttgtaggcatatgtactttgccgtt 36868350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 121; Significance: 5e-62; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 35 - 272
Target Start/End: Original strand, 159677 - 159926
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||||||||| ||||||||||||||||||||| ||  |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  159677 cgttccaaacaatattaaatatttcctaaaatataaaatacactttagaaatattccacagttgattcttagatgatatgcgcgttgcttgatcaataag 159776  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
     |||||||||| |||||||||| ||||||||||| ||| ||| | |            |||| |||||  |||||||| |||||||||  ||||||||||    
T  159777 ttaaggaaatattgtttccttaaacaataaagggtgcgtgtacaaacaggcgagaactcagagacactggaccgtgccaggatgttggggcatcatatcc 159876  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    |||||||| ||||||||||||||||||||||||||| |||||| ||||||    
T  159877 aacatcttccagagacgcctaaacacatgttgaaactttggtttcaactt 159926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 43 - 272
Target Start/End: Complemental strand, 1546 - 1305
Alignment:
Q  43 acaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagataaggaa 142  Q
    |||||||||||||||| ||||||||||| ||  | ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  1546 acaataataaatatttgctaaaatataaaatacagtttagaaatattctacagctgattcttagatgatatgcgcgttgcttgatcaataagttaaggaa 1447  T
Q  143 atactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatccaacatctt 230  Q
    ||| |||||||||| ||||||||||| ||||||| | |            ||| |||||| |||| |||  |||||||||| ||||||||||||||||||    
T  1446 atattgtttccttaaacaataaagggtgcgcgtacaaacaggcgagaactcaggcacactgaaccatgctaggatgttggagcatcatatccaacatctt 1347  T
Q  231 acagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
     ||||||||||||||||||||||||||| |||||||||||||    
T  1346 ccagagacgcctaaacacatgttgaaactttggttccaactt 1305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 35 - 272
Target Start/End: Complemental strand, 109812 - 109563
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||||||| | ||||||||||||||||||||| ||  |||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||    
T  109812 cgttccaaacaaaattaaatatttcctaaaatataaaatacactttagaaatattccacaattgattcttagatgatatgcgcgttgcttgatcaataag 109713  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
     |||||||||  |||||||||| ||||||||||||||||||| | |            ||||||||||||||||| || |||||||| | ||||  |||     
T  109712 ttaaggaaatcttgtttccttaaacaataaagggcgcgcgtacaaacaggcgagaactcagacacactaaaccgttccaggatgttgaagcatcgcatct 109613  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  109612 aacatcttccagagacgcctaaacacatgttgaaactttggttccaactt 109563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 35 - 272
Target Start/End: Complemental strand, 25231 - 24982
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||||||||| ||||||||||||||||||||| ||  ||||||||||||||| |||||||||||||||| |||||| ||| |||||||||||||||    
T  25231 cgttccaaacaatattaaatatttcctaaaatataaaatacactttagaaatattcaacagctgattcttagatgatatgtgcgatgcttgatcaataag 25132  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtatatac------------agacacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
     |||| ||||| |||||||||| | ||||||||||||  ||| | ||            || |||||| ||||||||| |||||||||| |||| |||||    
T  25131 ttaagcaaatattgtttccttaaataataaagggcgcatgtacaaacaggcgagaacttaggcacactgaaccgtgccaggatgttggagcatcgtatcc 25032  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  25031 aacatcttccagagacgcctaaacacatgttgaaactttggttccaactt 24982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 111; Significance: 5e-56; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 35 - 269
Target Start/End: Complemental strand, 11520965 - 11520718
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||||||||||||||||||||||||||||||| |   | ||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||    
T  11520965 cgttccaaacaataataaatatttcctaaaatataaaacacaatttagaaatattccacaaccgattcttagaagatatgggcgttgcttgatcaataag 11520866  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgta-tatacag------------acacactaaaccgtgcctggatgttggaacatcatatc 221  Q
     |||||||||| |||||||||| |||||||||||||||||||  | ||||            ||||||| ||||||||| |||||||| | |||  ||||    
T  11520865 ttaaggaaatattgtttccttaaacaataaagggcgcgcgtacaaaacaggcgagaactcgaacacactgaaccgtgccaggatgttgaagcattgtatc 11520766  T
Q  222 caacatcttacagagacgcctaaacacatgttgaaacattggttccaa 269  Q
    ||||||||| || |||||||||||||||||||||||| ||||||||||    
T  11520765 caacatcttccatagacgcctaaacacatgttgaaactttggttccaa 11520718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 35 - 272
Target Start/End: Complemental strand, 16207434 - 16207185
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||| |||||| |||||||||||||||||||| || |||||||||||||||| ||| |||||||||  |||||||| | ||||||||||||| |||    
T  16207434 cgttccaaccaataaaaaatatttcctaaaatataaaatatactttagaaatattcgacaactgattcttcaaagatatgtgtgttgcttgatcaacaag 16207335  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtata--ta----------cagacacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
    ||||||||||| |||||||||| ||||||||||| ||||||| |  ||          ||| |||||| |||| |||| |||||||||||||||||||||    
T  16207334 ataaggaaatattgtttccttaaacaataaagggtgcgcgtacaagtaggcatgaacccaggcacactgaaccatgccaggatgttggaacatcatatcc 16207235  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    ||||||||||||||| |||||||||||||||| ||  |||||| ||||||    
T  16207234 aacatcttacagagatgcctaaacacatgttggaatgttggtttcaactt 16207185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 41 - 270
Target Start/End: Complemental strand, 29545688 - 29545447
Alignment:
Q  41 aaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagataagg 140  Q
    ||||||||| ||||||||||||||||||||   ||||||||| ||||||||||| ||||||||   ||||||||| ||||||||||||||||||||| ||    
T  29545688 aaacaataacaaatatttcctaaaatataaatactactttaggaatattccacaactgattctgtaaagatatgcacgttgcttgatcaataagatacgg 29545589  T
Q  141 aaatactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatccaacatc 228  Q
    ||||| |||||||||| ||||||||||||||||||| | |            |||||||||| |||| |||  ||||||||||||||  |||||||||||    
T  29545588 aaatattgtttccttaaacaataaagggcgcgcgtacaaataggcatgaacccagacacactgaaccatgctaggatgttggaacattgtatccaacatc 29545489  T
Q  229 ttacagagacgcctaaacacatgttgaaacattggttccaac 270  Q
    ||||||||| |||||||||||||||| |||||| ||||||||    
T  29545488 ttacagagatgcctaaacacatgttggaacattagttccaac 29545447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 35 - 272
Target Start/End: Original strand, 15506836 - 15507085
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||| |||||| |||||||||||||||||||| || |||||||||||||||||||| |||||||||  ||||||||||| || |||| ||||||||    
T  15506836 cgttccaaccaataacaaatatttcctaaaatataaaatatactttagaaatattccacaactgattcttcaaagatatgcgcatttcttggtcaataag 15506935  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtata--ta----------cagacacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
    ||||| ||||| |||||||||| ||||||||| ||||||||| |  ||          ||| || ||| ||||||| | ||||||| ||||||| |||||    
T  15506936 ataagaaaatattgtttccttaaacaataaagagcgcgcgtacaggtaggcaagaacccaggcatacttaaccgtgtcaggatgtttgaacatcgtatcc 15507035  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    ||||||||| ||||| |||||||||||||||| |||||||||||||||||    
T  15507036 aacatcttatagagatgcctaaacacatgttggaacattggttccaactt 15507085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 35 - 272
Target Start/End: Original strand, 4459345 - 4459594
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||| |||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||    |||||| |||||||||||  |||||||    
T  4459345 cgttccaaccaataacaaatatttccaaaaatataaaatctactttagaaatattccacagctgattctggatagatattcgcgttgcttggacaataag 4459444  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
     |||||||||| ||||||| || ||||||||||||||||||| | |             || |||||| || |||||  ||||||||||||||  |||||    
T  4459445 ttaaggaaatattgtttccataaacaataaagggcgcgcgtacaaataggcatgaacctaggcacactgaatcgtgctaggatgttggaacattgtatcc 4459544  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    ||||||||||||||| ||||||||| |||||| |||||||||||||||||    
T  4459545 aacatcttacagagatgcctaaacagatgttggaacattggttccaactt 4459594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 35 - 272
Target Start/End: Original strand, 20992149 - 20992398
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||  |||||| ||||||||||||||||||||   ||||||||||||||||| |||| ||||| |    |||||||||||||||||| ||||||||    
T  20992149 cgttccacccaataacaaatatttcctaaaatataaatactactttagaaatattcaacagttgattttgtatagatatgcgcgttgcttggtcaataag 20992248  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
    ||||||||||| |||||||||| ||||||||| | ||||||| | |             || |||||| ||||||||| |||||||||||||||||||||    
T  20992249 ataaggaaatattgtttccttaaacaataaagagtgcgcgtacaaataggcatgaacctaggcacactgaaccgtgccaggatgttggaacatcatatcc 20992348  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    ||||||||||||||| ||||||||| ||||| ||||| ||||||||||||    
T  20992349 aacatcttacagagatgcctaaacaaatgttaaaacactggttccaactt 20992398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 35 - 153
Target Start/End: Original strand, 14165771 - 14165889
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||    
T  14165771 cgttccaaacaaaaataaatatttcctaaaatataatatctactttagaaatattccaccgctgattcttagatgatatgcgtgttgcttgatcaataag 14165870  T
Q  135 ataaggaaatactgtttcc 153  Q
     |||||||||| |||||||    
T  14165871 ttaaggaaatattgtttcc 14165889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 44 - 272
Target Start/End: Original strand, 15438691 - 15438931
Alignment:
Q  44 caataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagataaggaaa 143  Q
    |||||| |||||||||||||||||||| || |||||||||||||||||| || ||||||||  ||||||||||| ||||||| ||||||||||||| |||    
T  15438691 caataacaaatatttcctaaaatataaaatatactttagaaatattccaaagttgattcttcaaagatatgcgcattgcttggtcaataagataagaaaa 15438790  T
Q  144 tactgtttccttacacaataaagggcgcgcgtata--ta----------cagacacactaaaccgtgcctggatgttggaacatcatatccaacatctta 231  Q
    || |||||||||| ||||||||| | | ||||| |  ||          ||| |||||| ||||||| | |||||||  |||||| ||||||||||||||    
T  15438791 tattgtttccttaaacaataaagagtgtgcgtacaggtaggcaagaacccaggcacacttaaccgtgtcaggatgtttaaacatcgtatccaacatctta 15438890  T
Q  232 cagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    |||||| |||||||||||||||  |||||||||||||||||    
T  15438891 cagagatgcctaaacacatgtttgaacattggttccaactt 15438931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 45 - 272
Target Start/End: Original strand, 12326428 - 12326667
Alignment:
Q  45 aataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagataaggaaat 144  Q
    ||||| |||||||| |||||||||||   |||||||||||||||||||||||| ||||     ||||||||||||| |||| ||||||||||||||||||    
T  12326428 aataacaaatattttctaaaatataaatactactttagaaatattccacagctaattcggtatagatatgcgcgtttcttggtcaataagataaggaaat 12326527  T
Q  145 actgtttccttacacaataaagggcgcgcgtata--ta----------cagacacactaaaccgtgcctggatgttggaacatcatatccaacatcttac 232  Q
    | |||||||||| ||||||||| | ||||||| |  ||          ||  |||||| ||||||||| ||||||||||||||| ||||||||||||||     
T  12326528 attgtttccttaaacaataaagagtgcgcgtacaagtaggcatgaacccatgcacactgaaccgtgccaggatgttggaacatcgtatccaacatcttat 12326627  T
Q  233 agagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    ||||| |||||||||||||||| ||| || ||||||||||    
T  12326628 agagatgcctaaacacatgttggaacctttgttccaactt 12326667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 46 - 272
Target Start/End: Complemental strand, 16222115 - 16221877
Alignment:
Q  46 ataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagataaggaaata 145  Q
    |||| |||||||||||||||||||| | ||||||||||||| || |||| |||||||||  |||||||| |||||||| | |||| ||||||||||||||    
T  16222115 ataacaaatatttcctaaaatataaaacctactttagaaatttttcacaactgattcttcaaagatatgtgcgttgctaggtcaacaagataaggaaata 16222016  T
Q  146 ctgtttccttacacaataaagggcgcgc----------gtatatac--agacacactaaaccgtgcctggatgttggaacatcatatccaacatcttaca 233  Q
     |||||||||| |||| |||||| ||||          ||||  ||  ||||||| |||| | |||| ||||||||||||||| ||||||||||||||||    
T  16222015 ttgtttccttaaacaagaaagggggcgcatacaagtaggtatgaacctagacacagtaaatcatgccaggatgttggaacatcgtatccaacatcttaca 16221916  T
Q  234 gagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    |||| |||  ||||||||||| ||  |||||||||||||    
T  16221915 gagatgccagaacacatgttggaatgttggttccaactt 16221877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 35 - 272
Target Start/End: Original strand, 645742 - 645987
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||||||||| |  |||||||||||||||||| ||  ||||||||||||||||||   ||||||||||| ||||||||||| ||||||||||||||    
T  645742 cgttccaaacaatattcgatatttcctaaaatataaaatacactttagaaatattccac---tgattcttagatgatatgcgcgtagcttgatcaataag 645838  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
     |||| ||||| |||||||||| |||||||| | |||||||| | |            ||| |||||| ||||||||| |||||||| | ||||  ||||    
T  645839 ttaagaaaatattgtttccttaaacaataaa-gacgcgcgtacaaacaggcgagaactcaggcacactgaaccgtgccaggatgttgaagcatcgcatcc 645937  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    ||||| ||  |||||||| ||||||||||||||||| ||||||| |||||    
T  645938 aacattttctagagacgcttaaacacatgttgaaactttggttctaactt 645987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 51 - 167
Target Start/End: Original strand, 16437397 - 16437513
Alignment:
Q  51 aaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagataaggaaatactgtt 150  Q
    |||||||||||||||||||||  | ||||||| ||||||||||| ||||| ||   |||||||| |||||||||||||||||||||||||| |||  |||    
T  16437397 aaatatttcctaaaatataatcacaactttaggaatattccacaactgatcctgcaaagatatgtgcgttgcttgatcaataagataaggacatatggtt 16437496  T
Q  151 tccttacacaataaagg 167  Q
    |||||| | ||||||||    
T  16437497 tccttaaataataaagg 16437513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 185 - 270
Target Start/End: Complemental strand, 23082167 - 23082083
Alignment:
Q  185 cacactaaaccgtgcctggatgttggaacatcatatccaacatcttacagagacgcctaaacacatgttgaaacattggttccaac 270  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||| | ||||||| |||||||| ||||| | |||||||    
T  23082167 cacactgaaccgtgccaggatgttggaacatcatatccaacatcttacagaaatgcctaaa-acatgttggaacatagtttccaac 23082083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 260
Target Start/End: Complemental strand, 26132360 - 26132272
Alignment:
Q  171 cgcgtatatacagacacactaaaccgtgcctggatgttggaacatcatatccaacatcttacagagacgcctaaacacatgttgaaacat 260  Q
    |||||| | |||| |||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||| || |||||||| |||||    
T  26132360 cgcgtacaaacaggcacactgaaccgtgccaggatgttggaacatcatatccaacatcttacagagatgcctgaa-acatgttggaacat 26132272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 154
Target Start/End: Original strand, 10280476 - 10280579
Alignment:
Q  51 aaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagataaggaaatactgtt 150  Q
    |||||||||||||||||||||  | ||||||| ||||| ||||| |||||  |   |||||||||| |||||||  ||||||||||||||||||||||||    
T  10280476 aaatatttcctaaaatataatcacaactttaggaatatgccacaactgatcatataaagatatgcgtgttgctttgtcaataagataaggaaatactgtt 10280575  T
Q  151 tcct 154  Q
    ||||    
T  10280576 tcct 10280579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 262
Target Start/End: Original strand, 14927270 - 14927489
Alignment:
Q  51 aaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagataaggaaatactgtt 150  Q
    |||||||||||||| ||||||  |  |||||| ||||||||||| ||||||||   |||||||||| |||||||| ||||  ||||||| |||||  |||    
T  14927270 aaatatttcctaaa-tataatcacatctttaggaatattccacaactgattctgtaaagatatgcgtgttgcttggtcaa--agataagaaaatatggtt 14927366  T
Q  151 tccttacacaataaagggcgcgcgtatatacagaca------------cactaaaccgtgcctggatgttggaacatcatatccaacatcttacagagac 238  Q
    |||||| | |||||| |||||||||| | || ||||            |||||||||||||| ||||||||||||||| |||||||||||||| |||||     
T  14927367 tccttaaataataaaaggcgcgcgtacaaaccgacatgatacaaggcacactaaaccgtgccaggatgttggaacatcgtatccaacatcttaaagagat 14927466  T
Q  239 gcctaaacacatgttgaaacattg 262  Q
    | || || |||||||| |||||||    
T  14927467 gtctgaa-acatgttggaacattg 14927489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 262
Target Start/End: Original strand, 15350736 - 15350955
Alignment:
Q  51 aaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagataaggaaatactgtt 150  Q
    |||||||||||||| ||||||  |  |||||| ||||||||||| ||||||||   |||||||||| |||||||| ||||  ||||||| |||||  |||    
T  15350736 aaatatttcctaaa-tataatcacatctttaggaatattccacaactgattctgtaaagatatgcgtgttgcttggtcaa--agataagaaaatatggtt 15350832  T
Q  151 tccttacacaataaagggcgcgcgtatatacagaca------------cactaaaccgtgcctggatgttggaacatcatatccaacatcttacagagac 238  Q
    |||||| | |||||| |||||||||| | || ||||            |||||||||||||| ||||||||||||||| |||||||||||||| |||||     
T  15350833 tccttaaataataaaaggcgcgcgtacaaaccgacatgatacaaggcacactaaaccgtgccaggatgttggaacatcgtatccaacatcttaaagagat 15350932  T
Q  239 gcctaaacacatgttgaaacattg 262  Q
    | || || |||||||| |||||||    
T  15350933 gtctgaa-acatgttggaacattg 15350955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 260
Target Start/End: Original strand, 21261198 - 21261272
Alignment:
Q  185 cacactaaaccgtgcctggatgttggaacatcatatccaacatcttacagagacgcctaaacacatgttgaaacat 260  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||| | ||||||| |||||||| |||||    
T  21261198 cacactgaaccgtgccaggatgttggaacatcatatccaacatcttacagaaatgcctaaa-acatgttggaacat 21261272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 197 - 261
Target Start/End: Complemental strand, 20924486 - 20924423
Alignment:
Q  197 tgcctggatgttggaacatcatatccaacatcttacagagacgcctaaacacatgttgaaacatt 261  Q
    |||| ||||||||||||||| ||||||||||||||| |||| |||| ||| ||||||||||||||    
T  20924486 tgccaggatgttggaacatcgtatccaacatcttacggagatgcctgaac-catgttgaaacatt 20924423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 185 - 245
Target Start/End: Original strand, 23960793 - 23960853
Alignment:
Q  185 cacactaaaccgtgcctggatgttggaacatcatatccaacatcttacagagacgcctaaa 245  Q
    |||||| || |||||| ||||||||||||||| |||||||||||||||||| | |||||||    
T  23960793 cacactgaatcgtgccaggatgttggaacatcgtatccaacatcttacagaaatgcctaaa 23960853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 260
Target Start/End: Complemental strand, 10038121 - 10038047
Alignment:
Q  185 cacactaaaccgtgcctggatgttggaacatcatatccaacatcttacagagacgcctaaacacatgttgaaacat 260  Q
    |||||| |||| |||| | |||||||||||| ||||||||||||||||||| | ||||||| |||||||| |||||    
T  10038121 cacactgaaccatgccagtatgttggaacattatatccaacatcttacagaaatgcctaaa-acatgttggaacat 10038047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 78
Target Start/End: Original strand, 11999487 - 11999530
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctact 78  Q
    |||||||| ||||||||||||||||||||||||||| |||||||    
T  11999487 cgttccaaccaataataaatatttcctaaaatataaaatctact 11999530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 235
Target Start/End: Original strand, 42636970 - 42637024
Alignment:
Q  181 cagacacactaaaccgtgcctggatgttggaacatcatatccaacatcttacaga 235  Q
    |||||||||| ||||||||| ||| ||||||||||| ||| ||||||||||||||    
T  42636970 cagacacactgaaccgtgccaggacgttggaacatcgtattcaacatcttacaga 42637024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 185 - 254
Target Start/End: Original strand, 10661630 - 10661698
Alignment:
Q  185 cacactaaaccgtgcctggatgttggaacatcatatccaacatcttacagagacgcctaaacacatgttg 254  Q
    |||||| ||||||||  ||||||||||||||| |||||||||||||||| | | ||||||| ||||||||    
T  10661630 cacactgaaccgtgctaggatgttggaacatcgtatccaacatcttacataaatgcctaaa-acatgttg 10661698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 272
Target Start/End: Original strand, 14165945 - 14166015
Alignment:
Q  202 ggatgttggaacatcatatccaacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    ||||||||| ||||  |||||||||||||| ||||  |||||| ||||||||| ||| |||| ||||||||    
T  14165945 ggatgttgggacattgtatccaacatcttatagagttgcctaaccacatgttggaactttggctccaactt 14166015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 233
Target Start/End: Original strand, 19295517 - 19295567
Alignment:
Q  183 gacacactaaaccgtgcctggatgttggaacatcatatccaacatcttaca 233  Q
    |||||||| |||||||||  |||||||||||||| ||||||||||| ||||    
T  19295517 gacacactgaaccgtgccaagatgttggaacatcgtatccaacatcataca 19295567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 137
Target Start/End: Complemental strand, 23082272 - 23082226
Alignment:
Q  91 cacagctgattcttagaagatatgcgcgttgcttgatcaataagata 137  Q
    ||||||||||||| |  ||||||||||||||||||||||| ||||||    
T  23082272 cacagctgattctgaatagatatgcgcgttgcttgatcaacaagata 23082226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 22747325 - 22747288
Alignment:
Q  1 atattagttaaatttgtaggcatatgtactttgccgtt 38  Q
    |||||||| | |||||||||||||||||||||||||||    
T  22747325 atattagtcatatttgtaggcatatgtactttgccgtt 22747288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 185 - 229
Target Start/End: Original strand, 24902874 - 24902917
Alignment:
Q  185 cacactaaaccgtgcctggatgttggaacatcatatccaacatct 229  Q
    |||||| ||||||||  ||||||||||||||||||||||||||||    
T  24902874 cacactgaaccgtgca-ggatgttggaacatcatatccaacatct 24902917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 35 - 176
Target Start/End: Original strand, 2496 - 2637
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||||||||||||||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2496 cgttccaaacaataataaatatttcctaaaatatataatacactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 2595  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgta 176  Q
     |||||||||| |||||||||| ||||||||||||| |||||    
T  2596 ttaaggaaatattgtttccttaaacaataaagggcgtgcgta 2637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 35 - 272
Target Start/End: Complemental strand, 47945 - 47695
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||||||||| ||||||||||||||||||||| ||  | ||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||    
T  47945 cgttccaaacaatattaaatatttcctaaaatataaaatacattttagaaatattccttagctgattcttagaagatatgcgcgctgcttgatcaataag 47846  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtatata-------------cagacacactaaaccgtgcctggatgttggaacatcatatc 221  Q
     |||||||||| ||||| |||| |||| |||||||||||||| | |             ||| |||||| ||||||||| ||||||||||  ||| ||||    
T  47845 ttaaggaaatattgttttcttaaacaacaaagggcgcgcgtacaaacaccgcgagaactcaggcacactgaaccgtgccaggatgttggagtatcgtatc 47746  T
Q  222 caacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    ||||||||| ||||||||||||||||||||||||||  ||||||| |||||    
T  47745 caacatcttccagagacgcctaaacacatgttgaaattttggttctaactt 47695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 93; Significance: 3e-45; HSPs: 3)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 37 - 270
Target Start/End: Complemental strand, 17676 - 17431
Alignment:
Q  37 ttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagat 136  Q
    |||||| |||||| ||||||||||||||||||||   ||||||||||||||||||| ||||||||||   ||||||||||||||  ||| | ||||||||    
T  17676 ttccaaccaataaaaaatatttcctaaaatataaatactactttagaaatattccatagctgattctgtaaagatatgcgcgttagttggttaataagat 17577  T
Q  137 aaggaaatactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatccaa 224  Q
    ||||||||| |||||||||| |||||||||||||| | || | |            ||| |||||| |||||||   |||||||||||||||||||| ||    
T  17576 aaggaaatattgtttccttaaacaataaagggcgcacatacaaatatgcatgaactcaggcacactgaaccgtggtaggatgttggaacatcatatctaa 17477  T
Q  225 catcttacagagacgcctaaacacatgttgaaacattggttccaac 270  Q
    |||||||||||||  ||||||||||||||| |||||||||||||||    
T  17476 catcttacagagatacctaaacacatgttggaacattggttccaac 17431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 37 - 270
Target Start/End: Complemental strand, 27070 - 26825
Alignment:
Q  37 ttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagat 136  Q
    |||||| |||||| ||||||||||||||||||||   ||||||||||||||||||| ||||||||||   ||||||||||||||  ||| | ||||||||    
T  27070 ttccaaccaataaaaaatatttcctaaaatataaatactactttagaaatattccatagctgattctgtaaagatatgcgcgttagttggttaataagat 26971  T
Q  137 aaggaaatactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatccaa 224  Q
    ||||||||| |||||||||| |||||||||||||| | || | |            ||| |||||| |||||||   |||||||||||||||||||| ||    
T  26970 aaggaaatattgtttccttaaacaataaagggcgcacatacaaatatgcatgaactcaggcacactgaaccgtggtaggatgttggaacatcatatctaa 26871  T
Q  225 catcttacagagacgcctaaacacatgttgaaacattggttccaac 270  Q
    |||||||||||||  ||||||||||||||| |||||||||||||||    
T  26870 catcttacagagatacctaaacacatgttggaacattggttccaac 26825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 35 - 270
Target Start/End: Complemental strand, 7091 - 6845
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||| |||||| ||||||||||||||||||||   ||||||||||||||||||| | |||||| |   ||| ||||| ||||||||| ||||||||    
T  7091 cgttccaaccaataacaaatatttcctaaaatataaatactactttagaaatattccagaactgattttgtaaagctatgcccgttgcttggtcaataag 6992  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtatata----------cagacacactaaaccgtgcc-tggatgttggaacatcatatcca 223  Q
    | ||||||||| | |||||||| |||||||||||||||   | |||          |||||||||| |||||||||  ||||||||||||||||||||||    
T  6991 aaaaggaaatattatttccttaaacaataaagggcgcgtacaaataggcatgaacccagacacactgaaccgtgccaaggatgttggaacatcatatcca 6892  T
Q  224 acatcttacagagacgcctaaacacatgttgaaacattggttccaac 270  Q
    | |||||||| ||| | |||||||||||||| |||||||||||||||    
T  6891 aaatcttacaaagatggctaaacacatgttggaacattggttccaac 6845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 92; Significance: 1e-44; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 35 - 272
Target Start/End: Complemental strand, 16174 - 15926
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||| |||||| |||||||| ||||||||||||||||||||||||||||||| ||| ||||||||    |||||||||| ||||||| ||||||||    
T  16174 cgttccaaccaataacaaatattttctaaaatataatatctactttagaaatattcaacatctgattctgtatagatatgcgcattgcttggtcaataag 16075  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgcgtata--ta----------cagacacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
    |||| |||||| |||||||||| ||||||||| |||| |||| |  ||          ||| |||||  ||||||||| ||||||||||||||| |||||    
T  16074 ataatgaaatattgtttccttaaacaataaagagcgcacgtacaagtaggaatgaacccaggcacaccgaaccgtgccaggatgttggaacatcgtatcc 15975  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    ||||||||||||||| | |||||||| ||||| || ||||||||||||||    
T  15974 aacatcttacagagatg-ctaaacacgtgttggaatattggttccaactt 15926  T

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Target: scaffold0213 (Bit Score: 91; Significance: 4e-44; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 39 - 270
Target Start/End: Complemental strand, 8128 - 7885
Alignment:
Q  39 ccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagataa 138  Q
    |||| |||||| ||||||||||||||||||||   ||||||||||| ||||||||||||||||||   |||||||| |||||||||| ||||||||||||    
T  8128 ccaaccaataacaaatatttcctaaaatataaatactactttagaagtattccacagctgattctataaagatatgtgcgttgcttggtcaataagataa 8029  T
Q  139 ggaaatactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaaccgtgcctggatgttggaacatcatatccaaca 226  Q
    ||||||| |||||||||| ||||||||| ||| ||||| | |            ||| |||||| ||| ||||| ||||||| ||||||| ||| |||||    
T  8028 ggaaatattgtttccttaaacaataaagagcgggcgtacaaataggcatgaacccaggcacactgaacagtgccgggatgttcgaacatcgtatgcaaca 7929  T
Q  227 tcttacagagacgcctaaacacatgttgaaacattggttccaac 270  Q
    ||||| ||||| || ||||||||||||| |||||||||||||||    
T  7928 tcttatagagatgcttaaacacatgttggaacattggttccaac 7885  T

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Target: scaffold0259 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 35 - 272
Target Start/End: Complemental strand, 16879 - 16630
Alignment:
Q  35 cgttccaaacaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataag 134  Q
    |||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||    |||||||||||||| ||| ||||||||    
T  16879 cgttccaaccaataacaaatatttcctaaaatataaaatctactttagaaatattccaccgctgattctgtatagatatgcgcgttgtttggtcaataag 16780  T
Q  135 ataaggaaatactgtttccttacacaataaagggcgcgc------gtat------atacagacacactaaaccgtgcctggatgttggaacatcatatcc 222  Q
     ||||||| || |||||||||| |||||||||||| |||      ||||      |  ||| |||||| |||| || | ||||||| || |||| |||||    
T  16779 ttaaggaattattgtttccttaaacaataaagggcacgcttacaagtatgcatgaaatcaggcacactgaaccatgtcaggatgttagatcatcgtatcc 16680  T
Q  223 aacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||| |||||    
T  16679 aacatcttacaaagatgcctaaacacatgttgaaacattgtttctaactt 16630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 43 - 272
Target Start/End: Original strand, 9288 - 9529
Alignment:
Q  43 acaataataaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagataaggaa 142  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |    ||||||||| ||||||||  |||||||||||||||    
T  9288 acaataacaaatatttcctaaaatataaaatctactttagaaatattccacagctgattttgtatagatatgcgtgttgcttggacaataagataaggaa 9387  T
Q  143 atactgtttccttacacaataaagggcgcg----cgtatat--------acagacacactaaaccgtgcctggatgttggaacatcatatccaacatctt 230  Q
    ||| |||| ||||| ||||||||| |||||    | |||||         ||| |||||| |||||||||  || ||||||||||  ||||||||| |||    
T  9388 atattgttcccttaaacaataaagagcgcgtacacatatatgcatgaactcaggcacactgaaccgtgccaagaagttggaacattgtatccaacacctt 9487  T
Q  231 acagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
    ||||||| ||||||||| |||||| ||| |||||| ||||||    
T  9488 acagagatgcctaaacatatgttggaactttggtttcaactt 9529  T

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Target: scaffold0003 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 51 - 167
Target Start/End: Original strand, 27027 - 27143
Alignment:
Q  51 aaatatttcctaaaatataatatctactttagaaatattccacagctgattcttagaagatatgcgcgttgcttgatcaataagataaggaaatactgtt 150  Q
    |||||||||||||||||||||  | ||||||| ||||||||||| ||||| ||   |||||||| |||||||||||||||||||||||||| |||  |||    
T  27027 aaatatttcctaaaatataatcacaactttaggaatattccacaactgatcctgcaaagatatgtgcgttgcttgatcaataagataaggacatatggtt 27126  T
Q  151 tccttacacaataaagg 167  Q
    |||||| | ||||||||    
T  27127 tccttaaataataaagg 27143  T

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Target: scaffold0006 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 108 - 272
Target Start/End: Original strand, 88425 - 88599
Alignment:
Q  108 agatatgcgcgttgcttgatcaataagataaggaaatactgtttccttacacaataaagggcgcgcgtatata------------cagacacactaaacc 195  Q
    ||||||||||||||||||  ||||||||||||||| || |||| ||||| ||||||||| ||||||||| |||            ||| |||||| ||||    
T  88425 agatatgcgcgttgcttggacaataagataaggaactattgttcccttaaacaataaagagcgcgcgtacatatatgcatgaactcaggcacactgaacc 88524  T
Q  196 gtgcctggatgttggaacatcatatccaacatcttacagagacgcctaaacacatgttgaaacattggttccaactt 272  Q
     || | ||||||||||||||  |||||||||||||||  ||| |||||| ||||||||| ||| |||||||||||||    
T  88525 atgtcaggatgttggaacattgtatccaacatcttac--agatgcctaaccacatgttggaactttggttccaactt 88599  T

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Target: scaffold1001 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold1001
Description:

Target: scaffold1001; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 730 - 780
Alignment:
Q  185 cacactaaaccgtgcctggatgttggaacatcatatccaacatcttacaga 235  Q
    |||||| |||||||||  |||||||||||||| ||||||||||||||||||    
T  730 cacactgaaccgtgccaagatgttggaacatcgtatccaacatcttacaga 780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1001; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 108 - 176
Target Start/End: Original strand, 642 - 710
Alignment:
Q  108 agatatgcgcgttgcttgatcaataagataaggaaatactgtttccttacacaataaagggcgcgcgta 176  Q
    ||||||||  ||| |||| |||||||||||||||||||  ||||||||| | |||| | ||||||||||    
T  642 agatatgcatgttacttggtcaataagataaggaaatatggtttccttaaataatacaaggcgcgcgta 710  T

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Target: scaffold0520 (Bit Score: 32; Significance: 0.000000006; HSPs: 2)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 228
Target Start/End: Original strand, 5735 - 5778
Alignment:
Q  185 cacactaaaccgtgcctggatgttggaacatcatatccaacatc 228  Q
    |||||| |||| |||| |||||||||||||||||||||||||||    
T  5735 cacactgaaccatgccaggatgttggaacatcatatccaacatc 5778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 228
Target Start/End: Original strand, 11990 - 12033
Alignment:
Q  185 cacactaaaccgtgcctggatgttggaacatcatatccaacatc 228  Q
    |||||| |||| |||| |||||||||||||||||||||||||||    
T  11990 cacactgaaccatgccaggatgttggaacatcatatccaacatc 12033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 186 - 233
Target Start/End: Original strand, 38074 - 38121
Alignment:
Q  186 acactaaaccgtgcctggatgttggaacatcatatccaacatcttaca 233  Q
    ||||| ||| ||||| ||||||||||||||| ||||||||||||||||    
T  38074 acacttaactgtgccaggatgttggaacatcgtatccaacatcttaca 38121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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