View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10153_low_1 (Length: 889)
Name: NF10153_low_1
Description: NF10153
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF10153_low_1 |
 |  |
|
Alignment Details
Target: chr4 (Bit Score: 477; Significance: 0; HSPs: 7)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 477; E-Value: 0
Query Start/End: Original strand, 16 - 557
Target Start/End: Original strand, 21614527 - 21615076
Alignment:
Q |
16 |
acatcataaataggtcaaagttataagctagtgtcagtagtcatataaactctaagctcaattatatcgggtcagaatcatta--------cgcacaatt |
107 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |
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|
T |
21614527 |
acatcataaataggtcaaagttataagctagtgtcagtagtcatataaactctaagctcaattatatcgggtcagaatcataaaatcatcacgcacaatt |
21614626 |
T |
 |
Q |
108 |
tatgctgaataaacgagaataacaatcataataattcagagttacatattacatggcaaaaaagctagaacaaaatcatctcagacctaataaattgaaa |
207 |
Q |
|
|
||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
T |
21614627 |
tatactgaataaactagaataacaatcataataattcagagttacatattacatggcaaaaaagctagaacaaaataatctcagacctaataaattgaaa |
21614726 |
T |
 |
Q |
208 |
cttagctattgatggctaatgcacaaataactattaaaagaaaacaacattacatgaatttgggactcactatgagttggatggcaagccaccacgaaat |
307 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
T |
21614727 |
cttagctattgatggctaatgcacaaataactattaaaagaaaacaacattacatgaatttgggactcactatgagttggatggcaaaccaccacgaaat |
21614826 |
T |
 |
Q |
308 |
ctgcaatccttggctccaaatgtgtcttcaatctcccaagaagccgaacccttttttcagaaacgtgttcggcttttatagattttaattctgtgacgtc |
407 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |
|
|
T |
21614827 |
ctgcaatccttggctccaaatgtgtcttcaatctcccaagaagccgaacccttttttcataaacgtgtttggcttttatagattttaattctgtgacgtc |
21614926 |
T |
 |
Q |
408 |
aaaatcatggcccgatttgaagaaatcgtgacccgattttgcattaactgcatcatcaatcagacgctcctccaaaatcgtggcccgatttttctcttcc |
507 |
Q |
|
|
|||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
21614927 |
aaaatcgtggcccgatttgaagaaatcgtgatccgattttgcattaactgcatcatcaatcagacgctcctccaaaatcgtggcccgatttttctcttcc |
21615026 |
T |
 |
Q |
508 |
acaacattatttttctgtccttttttagcctctagcacctatgaactcat |
557 |
Q |
|
|
|||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
T |
21615027 |
tcaacattatttttctgtccttttttaacctctagcacctatgaactcat |
21615076 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 595 - 876
Target Start/End: Original strand, 21615116 - 21615397
Alignment:
Q |
595 |
gatgatatgacctagtgtcatcataagacctagtagtgtccttgaacccttctccttcctcatcaaataaacatgagaaatggatcgaacaatttgggat |
694 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
21615116 |
gatgatatgacctagtgtcatcataagacctagtagtgtccttgaacccttctccttcctcatcaaataaacatgagaaatggatcgaacaatttgggat |
21615215 |
T |
 |
Q |
695 |
atcatacaaagatgctgcagataacgaaaaacgtttgcaaatattcaagaacaatgtagagttcattgaattgttccatgttgccggagacaaacctttc |
794 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
T |
21615216 |
atcatacaaagatgctgcagataacgaaaaacgtttgcaaatattcaagaacaatgtagagttcattgaattgttccatgtttccggagacaaacctttc |
21615315 |
T |
 |
Q |
795 |
aacctaaatattaaacattttgctcacttaactaatgattgaacttatattacagttttaaagatatgaaataatttaattc |
876 |
Q |
|
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
21615316 |
aacctaagtattaaacattttgctcacttaactaatgattgaacttatattacagttttaaagatatgaaataatttaattc |
21615397 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 656 - 832
Target Start/End: Complemental strand, 31178216 - 31178040
Alignment:
Q |
656 |
atcaaataaacatgagaaatggatcgaacaatttgggatatcatacaaagatgctgcagataacgaaaaacgtttgcaaatattcaagaacaatgtagag |
755 |
Q |
|
|
|||||||||||||||||||||||| ||||||||| | ||| ||||||||||||||||| || ||||||||||| |||||||||||||| ||||| ||| |
|
|
T |
31178216 |
atcaaataaacatgagaaatggatgacacaatttggaaaatcttacaaagatgctgcagagaaggaaaaacgttttcaaatattcaagaataatgtggag |
31178117 |
T |
 |
Q |
756 |
ttcattgaattgttccatgttgccggagacaaacctttcaacctaaatattaaacattttgctcacttaactaatga |
832 |
Q |
|
|
||||||||||||||| ||| || ||| |||||||||||||||| | |||||| ||||||||| || |||||||||| |
|
|
T |
31178116 |
ttcattgaattgttcaatgctgttggaaacaaacctttcaaccttagtattaaccattttgctgacctaactaatga |
31178040 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 253 - 360
Target Start/End: Complemental strand, 5820282 - 5820175
Alignment:
Q |
253 |
aacattacatgaatttgggactcactatgagttggatggcaagccaccacgaaatctgcaatccttggctccaaatgtgtcttcaatctcccaagaagcc |
352 |
Q |
|
|
||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| | | ||||||||||||||||||||||| || || |
|
|
T |
5820282 |
aacattatatgaatttgggactgactatgagttggatgacaagccaccacgaaatctgcaatccttagtttcaaatgtgtcttcaatctcccaaaaaacc |
5820183 |
T |
 |
Q |
353 |
gaaccctt |
360 |
Q |
|
|
||||||| |
|
|
T |
5820182 |
aaaccctt |
5820175 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 161
Target Start/End: Original strand, 34855857 - 34856005
Alignment:
Q |
20 |
cataaataggtcaaagttataagctagtgtcagtagtcatataaactctaagctcaattatatcgggtc-------agaatcattacgcacaatttatgc |
112 |
Q |
|
|
|||||||| ||| || |||||||| |||||| ||||||| ||| ||||||| |||||| ||| ||||| | || ||||||||| ||||||| | |
|
|
T |
34855857 |
cataaatatgtctgagatataagctggtgtcattagtcatgtaatctctaagatcaattttattgggtcgaatcataaaagcattacgcataatttatac |
34855956 |
T |
 |
Q |
113 |
tgaataaacgagaataacaatcataataattcagagttacatattacat |
161 |
Q |
|
|
||||||||| ||||||| |||| |||||||||||||||||||||||| |
|
|
T |
34855957 |
tgaataaactgaaataacattcatgataattcagagttacatattacat |
34856005 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 176 - 335
Target Start/End: Complemental strand, 5693396 - 5693235
Alignment:
Q |
176 |
aacaaaatcatctcagacctaataaattgaaacttagctattgatggctaatgcacaaataacta--ttaaaagaaaacaacattacatgaatttgggac |
273 |
Q |
|
|
||||||||||| | ||||||||| | ||| ||||||| | |||||||| |||||||||| | ||||| || ||||||||||||||| | || | |
|
|
T |
5693396 |
aacaaaatcatattagacctaatcacgaaaaatttagctactcatggctaaagcacaaataatcagattaaataaagacaacattacatgaaatatggtc |
5693297 |
T |
 |
Q |
274 |
tcactatgagttggatggcaagccaccacgaaatctgcaatccttggctccaaatgtgtctt |
335 |
Q |
|
|
| ||||||| |||||||||| || ||||| || || ||||| ||| |||||||||||||||| |
|
|
T |
5693296 |
taactatgacttggatggcatgcgaccacaaattccgcaatgcttagctccaaatgtgtctt |
5693235 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 96
Target Start/End: Original strand, 48961947 - 48962001
Alignment:
Q |
42 |
gctagtgtcagtagtcatataaactctaagctcaattatatcgggtcagaatcat |
96 |
Q |
|
|
||||| ||||||||||||||||||||| |||||||||| ||||||||||||| |
|
|
T |
48961947 |
gctagcgtcagtagtcatataaactcttgaatcaattatattgggtcagaatcat |
48962001 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 173; Significance: 1e-92; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 95 - 387
Target Start/End: Original strand, 12104792 - 12105087
Alignment:
Q |
95 |
attacgcacaatttatgctgaataaacgagaataacaatcataataattcagagttacatattacatggcaaaaaagctagaacaaaatcatctcagacc |
194 |
Q |
|
|
|||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||| |
|
|
T |
12104792 |
attacgcacaatttatattgaataaactagaataacaatcataataattcagagttacaaattacatggccaaaaagctagaacagaatcatctcagacc |
12104891 |
T |
 |
Q |
195 |
taataaattgaaacttagctattgatggctaatgcacaaataact--attaaaagaaaacaacattacatgaatttgggactcactatgagttggatggc |
292 |
Q |
|
|
|||| |||||||||||||||| | ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
T |
12104892 |
taatcaattgaaacttagctactcatgactaatgcacaaataactagattaaaagaaaacaacattacatgaatttgggactggctatgagttggatggt |
12104991 |
T |
 |
Q |
293 |
aagccaccacgaaatctgcaatccttggctccaaatgtgtcttcaatct-cccaagaagccgaacccttttttcagaaacgtgttcggcttttata |
387 |
Q |
|
|
||||||||| ||||| |||| |||||| ||||||||||||| |||||| ||||| || | |||||||| |||| ||||||||| |||||||||| |
|
|
T |
12104992 |
aagccaccatgaaatttgcagtccttgaatccaaatgtgtctccaatctccccaaaaatcagaacccttgcttcataaacgtgtttggcttttata |
12105087 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 224 - 346
Target Start/End: Original strand, 3663658 - 3663782
Alignment:
Q |
224 |
taatgcacaaataactatt--aaaagaaaacaacattacatgaatttgggactcactatgagttggatggcaagccaccacgaaatctgcaatccttggc |
321 |
Q |
|
|
||||||||||||||||| | |||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||| ||||||||||||||| || |
|
|
T |
3663658 |
taatgcacaaataactaatgtaaaagaaaacaacattacatgaatttgggattgactatgagttgaatggcaagccaccacaaaatctgcaatccttagc |
3663757 |
T |
 |
Q |
322 |
tccaaatgtgtcttcaatctcccaa |
346 |
Q |
|
|
| |||||||||||||||| |||||| |
|
|
T |
3663758 |
ttcaaatgtgtcttcaatatcccaa |
3663782 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 161
Target Start/End: Original strand, 27805858 - 27805973
Alignment:
Q |
54 |
agtcatataaactctaagctcaattatatcgggtcagaatcat--------tacgcacaatttatgctgaataaacgagaataacaatcataataattca |
145 |
Q |
|
|
|||||||||| ||||||| |||||||||| || |||||||||| |||||||||||||| |||||||| | ||||||||| |||| |||||||| |
|
|
T |
27805858 |
agtcatataatctctaagatcaattatattggatcagaatcataaaagcattacgcacaatttatactgaataacctagaataacattcatgataattca |
27805957 |
T |
 |
Q |
146 |
gagttacatattacat |
161 |
Q |
|
|
|||||| | ||||||| |
|
|
T |
27805958 |
gagttatagattacat |
27805973 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 128; Significance: 1e-65; HSPs: 6)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 149 - 389
Target Start/End: Complemental strand, 18018948 - 18018707
Alignment:
Q |
149 |
ttacatattacatggcaaaaaagctagaacaaaatcatctcagacctaataaattgaaacttagctattgatggctaatgcacaaataacta--ttaaaa |
246 |
Q |
|
|
|||||||||| || | |||||||||||| | |||||||| ||||||||| |||||||||||||||| | ||||||||||||||||||| || |||||| |
|
|
T |
18018948 |
ttacatattatatagacaaaaagctagaatataatcatcttagacctaatcaattgaaacttagctactcatggctaatgcacaaataaatagattaaaa |
18018849 |
T |
 |
Q |
247 |
gaaaacaacattacatgaatttgggactcactatgagttggatggcaagccaccacgaaatctgcaatccttggctccaaatgtgtcttcaatctcccaa |
346 |
Q |
|
|
|||||||||||||| ||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
T |
18018848 |
gaaaacaacattacttgaatttgg-actgactatgagttggatggcaagtcaccacgaaatctgcaatcctcggctccaaatgtgtcttcaatctcccaa |
18018750 |
T |
 |
Q |
347 |
gaagccgaacccttttttcagaaacgtgttcggcttttataga |
389 |
Q |
|
|
| |||||||| ||||||||||||| |||||||||||| |
|
|
T |
18018749 |
aacctagaacccttgcttcagaaacgtgtatggcttttataga |
18018707 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 21 - 163
Target Start/End: Complemental strand, 31375514 - 31375364
Alignment:
Q |
21 |
ataaataggtcaaagttataagctagtgtcagtagtcatataaactctaagctcaattatatcgggtcagaatcat--------tacgcacaatttatgc |
112 |
Q |
|
|
||||||| ||| ||||||||||| ||||||| |||| ||||| ||||||| ||||||||| ||||||||||||| |||||||||||||| | |
|
|
T |
31375514 |
ataaataagtctgagttataagctggtgtcagcagtcctataatctctaagatcaattataatgggtcagaatcataaaagcattacgcacaatttatac |
31375415 |
T |
 |
Q |
113 |
tgaataaacgagaataacaatcataataattcagagttacatattacatgg |
163 |
Q |
|
|
| ||||| | |||||||| |||||||||||||||| |||| ||||||||| |
|
|
T |
31375414 |
taaataacctagaataactttcataataattcagagctacagattacatgg |
31375364 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 20 - 159
Target Start/End: Original strand, 20473815 - 20473962
Alignment:
Q |
20 |
cataaataggtcaaagttataagctagtgtcagtagtcatataaactctaagctcaattatatcgggtcagaatcat--------tacgcacaatttatg |
111 |
Q |
|
|
|||||||| ||| ||||||||||| ||||||| ||||||| || ||||||| ||||||||| | ||||||||||| ||| |||||||||| |
|
|
T |
20473815 |
cataaatatgtctgagttataagctggtgtcagcagtcatacaatctctaagaacaattatattgagtcagaatcataaaagcattacacacaatttata |
20473914 |
T |
 |
Q |
112 |
ctgaataaacgagaataacaatcataataattcagagttacatattac |
159 |
Q |
|
|
|||||||||| |||||||| |||||||||||||||| |||| ||||| |
|
|
T |
20473915 |
ctgaataaactagaataactttcataataattcagagctacagattac |
20473962 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 96
Target Start/End: Complemental strand, 22035751 - 22035676
Alignment:
Q |
21 |
ataaataggtcaaagttataagctagtgtcagtagtcatataaactctaagctcaattatatcgggtcagaatcat |
96 |
Q |
|
|
||||||| |||| ||||| | ||||||||||||||||||||| ||||||| |||||||||| ||||||||||||| |
|
|
T |
22035751 |
ataaatatgtcagagttaaacgctagtgtcagtagtcatatatactctaaaatcaattatattgggtcagaatcat |
22035676 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 96
Target Start/End: Complemental strand, 22038977 - 22038902
Alignment:
Q |
21 |
ataaataggtcaaagttataagctagtgtcagtagtcatataaactctaagctcaattatatcgggtcagaatcat |
96 |
Q |
|
|
||||||| |||| ||||| | ||||||||||||||||||||| ||||||| |||||||||| ||||||||||||| |
|
|
T |
22038977 |
ataaatatgtcagagttaaacgctagtgtcagtagtcatatatactctaaaatcaattatattgggtcagaatcat |
22038902 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 189
Target Start/End: Original strand, 43104112 - 43104292
Alignment:
Q |
16 |
acatcataaataggtcaaagttataagctagtgtcagtagtcatataaactctaagctcaattatatcgggtcagaat--------cattacgcacaatt |
107 |
Q |
|
|
|||| ||||||| |||| |||| || |||||||||||| |||||||| ||||||| |||||||||| |||||| ||| ||||| | |||||| |
|
|
T |
43104112 |
acattataaatatgtcagagttttacgctagtgtcagtggtcatatatactctaaaatcaattatattgggtcaaaatcataaaagcattaagaacaatt |
43104211 |
T |
 |
Q |
108 |
tatgctgaataaacgagaataacaatcataataattcagagttacatattacatggcaaaaa--agctagaacaaaatcatctc |
189 |
Q |
|
|
||| |||||||||| ||||| ||| |||||| ||| ||||||||| |||||| ||| | |||||||||||||||||||| |
|
|
T |
43104212 |
tatactgaataaactagaatgacattcataaagattaagagttacaggttacat---aaacatgagctagaacaaaatcatctc |
43104292 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 80; Significance: 5e-37; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 219 - 343
Target Start/End: Original strand, 7555511 - 7555637
Alignment:
Q |
219 |
atggctaatgcacaaataacta--ttaaaagaaaacaacattacatgaatttgggactcactatgagttggatggcaagccaccacgaaatctgcaatcc |
316 |
Q |
|
|
|||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||| ||| ||||||||||| |||| ||| |||||||||||||||| |
|
|
T |
7555511 |
atggataatgcacaaataactaaattaaaagaaaacaacattacatgaacttgggactgactttgagttggatgacaaggcactacgaaatctgcaatcc |
7555610 |
T |
 |
Q |
317 |
ttggctccaaatgtgtcttcaatctcc |
343 |
Q |
|
|
| ||||||||||| ||||||||||||| |
|
|
T |
7555611 |
tcggctccaaatgcgtcttcaatctcc |
7555637 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 149 - 329
Target Start/End: Complemental strand, 26272805 - 26272622
Alignment:
Q |
149 |
ttacatattacat-ggcaaaaaagctagaacaaaatcatctcagacctaataaattgaaacttagctattgatggctaatgcacaaataacta--ttaaa |
245 |
Q |
|
|
||||||||||||| || |||||| ||||||||| |||||| ||| ||||| || ||| ||||||| | |||| ||||||||||||||||| ||||| |
|
|
T |
26272805 |
ttacatattacattggtaaaaaacttagaacaaattcatctaagatctaatcaaagaaaatttagctactcatggttaatgcacaaataactaaattaaa |
26272706 |
T |
 |
Q |
246 |
agaaaacaacattacatgaatttgggactcactatgagttggatggcaagccaccacgaaatctgcaatccttggctccaaatg |
329 |
Q |
|
|
||||||||||||| ||||||||||||| | |||||||||||||||| || ||||||| |||||||||||||| |||||||||| |
|
|
T |
26272705 |
agaaaacaacattgcatgaatttgggattgactatgagttggatggaaaaccaccacaaaatctgcaatcctctgctccaaatg |
26272622 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 20 - 207
Target Start/End: Complemental strand, 23048871 - 23048678
Alignment:
Q |
20 |
cataaataggtcaaagttataagctagtgtcagtagtcatataaactctaagctcaattatatcgggtcagaat--------cattacgcacaatttatg |
111 |
Q |
|
|
|||||||| |||| ||||||||||| ||||||| ||||||| || ||||||| |||||||||| |||||||||| ||||||||||||||||| |
|
|
T |
23048871 |
cataaatatgtcagagttataagctggtgtcagcagtcatacaatctctaagatcaattatattgggtcagaatcataaaagcattacgcacaatttata |
23048772 |
T |
 |
Q |
112 |
ctgaataaacgagaataacaatcataataattcagagttacatattacatggcaaaaaagctagaacaaaatcatctcagacctaataaattgaaa |
207 |
Q |
|
|
|||||| ||| |||||||| |||| |||||||||||||||| ||||||| | | ||||||||||||||||||| |||||||| ||| |||| |
|
|
T |
23048771 |
ctgaat-aacctgaataacattcatgataattcagagttacagattacatag-tcatgagctagaacaaaatcatctatgacctaatcaatagaaa |
23048678 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 10558264 - 10558339
Alignment:
Q |
21 |
ataaataggtcaaagttataagctagtgtcagtagtcatataaactctaagctcaattatatcgggtcagaatcat |
96 |
Q |
|
|
||||||| |||| ||||| | ||||||||||||||||||||| ||||||| |||||||||| |||||| |||||| |
|
|
T |
10558264 |
ataaatatgtcagagttaaacgctagtgtcagtagtcatatatactctaaaatcaattatattgggtcataatcat |
10558339 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 28716987 - 28717059
Alignment:
Q |
24 |
aataggtcaaagttataagctagtgtcagtagtcatataaactctaagctcaattatatcgggtcagaatcat |
96 |
Q |
|
|
|||| |||||||||||||||| |||||| ||||||||||| ||||| |||||||||| |||| |||||||| |
|
|
T |
28716987 |
aataagtcaaagttataagctggtgtcaatagtcatataatctctagaatcaattatattgggttagaatcat |
28717059 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 163
Target Start/End: Original strand, 17545030 - 17545179
Alignment:
Q |
21 |
ataaataggtcaaagttataagctagtgtcagtagtcatataaactctaagctcaattatatcgggtcagaatcat--------tacgcacaatttatgc |
112 |
Q |
|
|
||||||| ||| ||||||||||| |||||| |||| ||||| |||||| |||||||||| |||||| |||||| ||| |||||||||| | |
|
|
T |
17545030 |
ataaataagtctgagttataagctggtgtcaacagtcctataatctctaaaatcaattatattgggtcataatcataaaagcattacacacaatttatac |
17545129 |
T |
 |
Q |
113 |
tgaataaacgagaataacaatcataataattcagagttacatattacatgg |
163 |
Q |
|
|
||||||| | |||||||| |||||||||||||||| |||| |||| |||| |
|
|
T |
17545130 |
tgaataa-ctagaataactttcataataattcagagctacagattaaatgg |
17545179 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 251 - 328
Target Start/End: Complemental strand, 18536662 - 18536585
Alignment:
Q |
251 |
acaacattacatgaatttgggactcactatgagttggatggcaagccaccacgaaatctgcaatccttggctccaaat |
328 |
Q |
|
|
||||||||||||||| | || || ||||||| |||||||| | |||||||| || ||||||| |||| ||||||||| |
|
|
T |
18536662 |
acaacattacatgaaatatggtctaactatgacttggatggtatgccaccacaaattctgcaacccttagctccaaat |
18536585 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 69; Significance: 2e-30; HSPs: 10)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 209 - 346
Target Start/End: Complemental strand, 14961494 - 14961355
Alignment:
Q |
209 |
ttagctattgatggctaatgcacaaataactatt--aaaagaaaacaacattacatgaatttgggactcactatgagttggatggcaagccaccacgaaa |
306 |
Q |
|
|
||||||| | |||||||||||||||||||||| | ||||||||||||||||||||||| || |||| | | |||||||||||| |||||||||| ||| |
|
|
T |
14961494 |
ttagctagtcatggctaatgcacaaataactaatgtaaaagaaaacaacattacatgaaattaagactgaatttgagttggatgggaagccaccacaaaa |
14961395 |
T |
 |
Q |
307 |
tctgcaatccttggctccaaatgtgtcttcaatctcccaa |
346 |
Q |
|
|
||||||||||| ||| |||||||||||||||||| |||| |
|
|
T |
14961394 |
tctgcaatcctaagcttcaaatgtgtcttcaatctaccaa |
14961355 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 149 - 343
Target Start/End: Complemental strand, 17336849 - 17336652
Alignment:
Q |
149 |
ttacatattacatggcaaaaaagct-agaacaaaatcatctcagacctaataaattgaaacttagctattgatggctaatgcacaaataacta--ttaaa |
245 |
Q |
|
|
||||||||||||| | ||||||| |||||||| ||||| |||| |||| ||| ||||||| ||| | | |||||||||||||||||||| ||||| |
|
|
T |
17336849 |
ttacatattacattggtcaaaagcttagaacaaattcatccaagacttaatcaatgaaaacttaactactcaaggctaatgcacaaataactagattaaa |
17336750 |
T |
 |
Q |
246 |
agaaaacaacattacatgaatttgggactcactatgagttggatggcaagccaccacgaaatctgcaatccttggctccaaatgtgtcttcaatctcc |
343 |
Q |
|
|
|||||||| |||||||||| ||| | ||| | |||| ||| || |||||||||||| |||| || |||||| ||||||||||||||||||||||| |
|
|
T |
17336749 |
agaaaacagcattacatgagttttgaactgattatgtgttaaatagcaagccaccacaaaatatgtaatcctcaactccaaatgtgtcttcaatctcc |
17336652 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 149 - 236
Target Start/End: Original strand, 42591167 - 42591254
Alignment:
Q |
149 |
ttacatattacatggcaaaaaagctagaacaaaatcatctcagacctaataaattgaaacttagctattgatggctaatgcacaaata |
236 |
Q |
|
|
||||| |||||||||| ||||| |||||||| ||||||||||||| ||| |||||||||||||||| | ||||||||||||||||| |
|
|
T |
42591167 |
ttacaaattacatggccaaaaaactagaacagaatcatctcagactcaatcaattgaaacttagctactcgtggctaatgcacaaata |
42591254 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 14159519 - 14159594
Alignment:
Q |
21 |
ataaataggtcaaagttataagctagtgtcagtagtcatataaactctaagctcaattatatcgggtcagaatcat |
96 |
Q |
|
|
||||||| |||| ||||||| ||||||||||||||||||||| ||||||| ||| |||||| ||||||||||||| |
|
|
T |
14159519 |
ataaatatgtcagagttatacgctagtgtcagtagtcatatatactctaaaatcagttatattgggtcagaatcat |
14159594 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 28139066 - 28139141
Alignment:
Q |
21 |
ataaataggtcaaagttataagctagtgtcagtagtcatataaactctaagctcaattatatcgggtcagaatcat |
96 |
Q |
|
|
||||||| |||| ||||| | ||||||||||||||||||||| ||||||| |||||||||| ||||||||||||| |
|
|
T |
28139066 |
ataaatatgtcagagttaaacgctagtgtcagtagtcatatatactctaaaatcaattatattgggtcagaatcat |
28139141 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 28142317 - 28142392
Alignment:
Q |
21 |
ataaataggtcaaagttataagctagtgtcagtagtcatataaactctaagctcaattatatcgggtcagaatcat |
96 |
Q |
|
|
||||||| |||| ||||| | ||||||||||||||||||||| ||||||| |||||||||| ||||||||||||| |
|
|
T |
28142317 |
ataaatatgtcagagttaaacgctagtgtcagtagtcatatatactctaaaatcaattatattgggtcagaatcat |
28142392 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 163
Target Start/End: Complemental strand, 8435048 - 8434896
Alignment:
Q |
20 |
cataaataggtcaaagttataagctagtgtcagtagtcatataaactctaagctcaattata-tcgggtcagaat--------cattacgcacaatttat |
110 |
Q |
|
|
|||||||| ||| ||||||||||| ||||||| |||| ||||| ||||||| ||||||||| | |||||||||| |||||| | |||| ||| |
|
|
T |
8435048 |
cataaataagtctgagttataagctggtgtcagcagtcctataatctctaagatcaattatattggggtcagaatcataaaagcattacacgcaatctat |
8434949 |
T |
 |
Q |
111 |
gctgaataaacgagaataacaatcataataattcagagttacatattacatgg |
163 |
Q |
|
|
|||||||||| | |||||| |||||||||||||||| |||| ||||||||| |
|
|
T |
8434948 |
actgaataaactataataactttcataataattcagagctacacattacatgg |
8434896 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 162
Target Start/End: Original strand, 26639746 - 26639898
Alignment:
Q |
18 |
atcataaataggtcaaagttataagctagtgtcagtagtcatataaactctaagctcaattatatcgggtcagaat--------cattacgcacaattta |
109 |
Q |
|
|
||||||||||| ||||||||||||| | ||||||| | |||||||| || |||| |||||| ||| || ||||||| ||||| |||||||||| |
|
|
T |
26639746 |
atcataaatagatcaaagttataagttggtgtcagcaatcatataatctataagttcaattgtattggttcagaatcataaaagcattaggcacaattta |
26639845 |
T |
 |
Q |
110 |
tgctgaataaacgagaataacaatcataataa-ttcagagttacatattacatg |
162 |
Q |
|
|
| | ||||||| |||||| ||||||||||| || |||||||||||||||||| |
|
|
T |
26639846 |
tac-aaataaactagaatagtaatcataataattttagagttacatattacatg |
26639898 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 161
Target Start/End: Original strand, 25663317 - 25663457
Alignment:
Q |
29 |
gtcaaagttataagctagtgtcagtagtcatataaactctaagctcaattatatcgggtcag--------aatcattacgcacaatttatgctgaataaa |
120 |
Q |
|
|
|||| ||||| | ||||||||||||||||||||| ||||||| ||| |||||| ||||||| || ||||| | ||||||||| ||||||||| |
|
|
T |
25663317 |
gtcagagttacacgctagtgtcagtagtcatatatactctaaaatcatttatattgggtcagaaacataaaagcattaagaacaatttatactgaataaa |
25663416 |
T |
 |
Q |
121 |
cgagaataacaatcataataattcagagttacatattacat |
161 |
Q |
|
|
| ||||| ||| |||||| ||| |||||||||| |||||| |
|
|
T |
25663417 |
ctagaatgacattcataaagattaagagttacatgttacat |
25663457 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 96
Target Start/End: Complemental strand, 1941624 - 1941557
Alignment:
Q |
29 |
gtcaaagttataagctagtgtcagtagtcatataaactctaagctcaattatatcgggtcagaatcat |
96 |
Q |
|
|
|||| ||||| | ||||||||||||||||||||||||||| |||||||||| ||||| ||||||| |
|
|
T |
1941624 |
gtcagagttacatgctagtgtcagtagtcatataaactcttgaatcaattatattgggtccgaatcat |
1941557 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 57; Significance: 2e-23; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 173 - 294
Target Start/End: Complemental strand, 23258655 - 23258532
Alignment:
Q |
173 |
tagaacaaaatcatctcagacctaataaattgaaacttagctattgatggctaatgcacaaataacta--ttaaaagaaaacaacattacatgaatttgg |
270 |
Q |
|
|
||||||| || ||||| ||||||||| ||||||| | ||||| | ||||||||| |||||||||||| |||||||||||||||||||||| ||||||| |
|
|
T |
23258655 |
tagaacataaacatctgagacctaatcaattgaagttaagctactcatggctaatccacaaataactagattaaaagaaaacaacattacataaatttgg |
23258556 |
T |
 |
Q |
271 |
gactcactatgagttggatggcaa |
294 |
Q |
|
|
||| |||||||||| |||||||| |
|
|
T |
23258555 |
gaccgactatgagttagatggcaa |
23258532 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 20 - 161
Target Start/End: Complemental strand, 3252216 - 3252067
Alignment:
Q |
20 |
cataaataggtcaaagttataagctagtgtcagtagtcatataaactctaagctcaattatatcgggtcagaat--------cattacgcacaatttatg |
111 |
Q |
|
|
|||||||| ||| ||||||||||| ||||||| |||||||||| ||||||| |||||||||| || ||||||| ||||||||||||||||| |
|
|
T |
3252216 |
cataaatatgtctgagttataagctggtgtcagcagtcatataatctctaagatcaattatattggatcagaatcataaaagcattacgcacaatttata |
3252117 |
T |
 |
Q |
112 |
ctgaataaacgagaataacaatcataataattcagagttacatattacat |
161 |
Q |
|
|
|| ||||| | |||||||| |||| |||||||||||||||| ||||||| |
|
|
T |
3252116 |
cttaataacctggaataacattcatgataattcagagttacagattacat |
3252067 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 96
Target Start/End: Complemental strand, 35076806 - 35076731
Alignment:
Q |
21 |
ataaataggtcaaagttataagctagtgtcagtagtcatataaactctaagctcaattatatcgggtcagaatcat |
96 |
Q |
|
|
||||||| |||| ||||| | ||||||||||||||||||||| ||||||| |||||||||| ||||||||||||| |
|
|
T |
35076806 |
ataaatatgtcagagttaaacgctagtgtcagtagtcatatatactctaaaatcaattatattgggtcagaatcat |
35076731 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 96
Target Start/End: Complemental strand, 35080064 - 35079989
Alignment:
Q |
21 |
ataaataggtcaaagttataagctagtgtcagtagtcatataaactctaagctcaattatatcgggtcagaatcat |
96 |
Q |
|
|
||||||| |||| ||||| | ||||||||||||||||||||| ||||||| |||||||||| ||||||||||||| |
|
|
T |
35080064 |
ataaatatgtcagagttaaacgctagtgtcagtagtcatatatactctaaaatcaattatattgggtcagaatcat |
35079989 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 6277390 - 6277457
Alignment:
Q |
29 |
gtcaaagttataagctagtgtcagtagtcatataaactctaagctcaattatatcgggtcagaatcat |
96 |
Q |
|
|
|||| ||||| | ||||||||||||||||||||||||||| |||||||||| ||||||||||||| |
|
|
T |
6277390 |
gtcagagttacacgctagtgtcagtagtcatataaactcttgaatcaattatattgggtcagaatcat |
6277457 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 49; Significance: 1e-18; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 21 - 162
Target Start/End: Complemental strand, 7570237 - 7570088
Alignment:
Q |
21 |
ataaataggtcaaagttataagctagtgtcagtagtcatataaactctaagctcaattatatcgggtcagaat--------cattacgcacaatttatgc |
112 |
Q |
|
|
||||||||||| ||||||||||| |||||| |||| ||||| ||||||| |||||||||| |||||||||| |||||| || ||||||| | |
|
|
T |
7570237 |
ataaataggtctgagttataagctggtgtcaacagtcctataatctctaagatcaattatattgggtcagaatcataaaagcattacacataatttatac |
7570138 |
T |
 |
Q |
113 |
tgaataaacgagaataacaatcataataattcagagttacatattacatg |
162 |
Q |
|
|
|||||||| ||||||| ||||||||||| |||||||||||||||||| |
|
|
T |
7570137 |
tgaataaaatgaaataacattcataataatttagagttacatattacatg |
7570088 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 21 - 162
Target Start/End: Complemental strand, 7576652 - 7576503
Alignment:
Q |
21 |
ataaataggtcaaagttataagctagtgtcagtagtcatataaactctaagctcaattatatcgggtcagaat--------cattacgcacaatttatgc |
112 |
Q |
|
|
||||||||||| ||||||||||| |||||| |||| ||||| ||||||| |||||||||| |||||||||| |||||| || ||||||| | |
|
|
T |
7576652 |
ataaataggtctgagttataagctggtgtcaacagtcctataatctctaagatcaattatattgggtcagaatcataaaagcattacacataatttatac |
7576553 |
T |
 |
Q |
113 |
tgaataaacgagaataacaatcataataattcagagttacatattacatg |
162 |
Q |
|
|
|||||||| ||||||| ||||||||||| |||||||||||||||||| |
|
|
T |
7576552 |
tgaataaaatgaaataacattcataataatttagagttacatattacatg |
7576503 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 1633909 - 1633984
Alignment:
Q |
21 |
ataaataggtcaaagttataagctagtgtcagtagtcatataaactctaagctcaattatatcgggtcagaatcat |
96 |
Q |
|
|
||||||| |||| ||||| | ||||||||||||||||||||| ||||||| |||||||||| ||||||||||||| |
|
|
T |
1633909 |
ataaatatgtcagagttaaacgctagtgtcagtagtcatatatactctaaaatcaattatattgggtcagaatcat |
1633984 |
T |
 |
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Target: chr7; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 1637154 - 1637229
Alignment:
Q |
21 |
ataaataggtcaaagttataagctagtgtcagtagtcatataaactctaagctcaattatatcgggtcagaatcat |
96 |
Q |
|
|
||||||| |||| ||||| | ||||||||||||||||||||| ||||||| |||||||||| ||||||||||||| |
|
|
T |
1637154 |
ataaatatgtcagagttaaacgctagtgtcagtagtcatatatactctaaaatcaattatattgggtcagaatcat |
1637229 |
T |
 |
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Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 163
Target Start/End: Original strand, 18970818 - 18970960
Alignment:
Q |
29 |
gtcaaagttataagctagtgtcagtagtcatataaactctaagctcaattatatcgggtcagaat--------cattacgcacaatttatgctgaataaa |
120 |
Q |
|
|
|||| ||||||||||| |||| || ||||||| || |||||| |||||||||| |||||||||| |||||| |||||||||| |||||||| |
|
|
T |
18970818 |
gtcagagttataagctggtgttagcagtcatacaatctctaatatcaattatattgggtcagaatcataaaagcattacacacaatttatattgaataaa |
18970917 |
T |
 |
Q |
121 |
cgagaataacaatcataataattcagagttacatattacatgg |
163 |
Q |
|
|
| |||||||| ||||||| |||||||| |||| ||||||||| |
|
|
T |
18970918 |
ctagaataactttcataatgattcagagctacagattacatgg |
18970960 |
T |
 |
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Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 44673249 - 44673324
Alignment:
Q |
21 |
ataaataggtcaaagttataagctagtgtcagtagtcatataaactctaagctcaattatatcgggtcagaatcat |
96 |
Q |
|
|
||||||| |||| ||||| | ||||||||| ||||||||||| ||||||| |||||||||| ||||||||||||| |
|
|
T |
44673249 |
ataaatatgtcagagttaaacgctagtgtcggtagtcatatatactctaaaatcaattatattgggtcagaatcat |
44673324 |
T |
 |
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Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 163
Target Start/End: Original strand, 18974057 - 18974126
Alignment:
Q |
94 |
cattacgcacaatttatgctgaataaacgagaataacaatcataataattcagagttacatattacatgg |
163 |
Q |
|
|
||||||||||||||||| | ||||||| || ||||| |||||||||||||||| |||| ||||||||| |
|
|
T |
18974057 |
cattacgcacaatttatattaaataaactaggataactttcataataattcagagctacagattacatgg |
18974126 |
T |
 |
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Target: chr6 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 159
Target Start/End: Original strand, 11184297 - 11184430
Alignment:
Q |
34 |
agttataagctagtgtcagtagtcatataaactctaagctcaattatatcgggtcagaatcat--------tacgcacaatttatgctgaataaacgaga |
125 |
Q |
|
|
||||||||||| ||||||| |||| ||||| |||||| |||||||||| | ||||||||||| ||| |||||||||| | |||||||| ||| |
|
|
T |
11184297 |
agttataagctggtgtcagcagtcctataatctctaatatcaattatattgagtcagaatcataaaagcattacacacaatttataccgaataaactaga |
11184396 |
T |
 |
Q |
126 |
ataacaatcataataattcagagttacatattac |
159 |
Q |
|
|
||||| |||||||||||||||| |||| ||||| |
|
|
T |
11184397 |
ataactttcataataattcagagctacagattac |
11184430 |
T |
 |
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Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 96
Target Start/End: Complemental strand, 27315750 - 27315696
Alignment:
Q |
42 |
gctagtgtcagtagtcatataaactctaagctcaattatatcgggtcagaatcat |
96 |
Q |
|
|
|||||| |||||||||||||||||||| |||||||||| ||||||||||||| |
|
|
T |
27315750 |
gctagtttcagtagtcatataaactcttgaatcaattatattgggtcagaatcat |
27315696 |
T |
 |
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