View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10153_low_5 (Length: 507)

Name: NF10153_low_5
Description: NF10153
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10153_low_5
NF10153_low_5
[»] chr7 (25 HSPs)
chr7 (1-339)||(28187477-28187812)
chr7 (359-507)||(28187335-28187483)
chr7 (209-255)||(23221392-23221438)
chr7 (211-264)||(22267572-22267625)
chr7 (209-262)||(35001145-35001198)
chr7 (213-262)||(36803831-36803880)
chr7 (216-264)||(28200407-28200455)
chr7 (211-262)||(964758-964809)
chr7 (219-265)||(23147277-23147323)
chr7 (209-263)||(24839480-24839534)
chr7 (209-262)||(7388054-7388107)
chr7 (216-257)||(8879769-8879810)
chr7 (209-262)||(25251503-25251556)
chr7 (209-262)||(36755008-36755060)
chr7 (209-262)||(36760805-36760857)
chr7 (209-254)||(40187651-40187696)
chr7 (209-262)||(42043081-42043134)
chr7 (221-266)||(46220977-46221022)
chr7 (213-261)||(6915962-6916010)
chr7 (209-257)||(7994899-7994947)
chr7 (209-257)||(16355511-16355559)
chr7 (216-264)||(20085781-20085828)
chr7 (216-264)||(22062435-22062483)
chr7 (217-257)||(27432336-27432376)
chr7 (228-264)||(37167731-37167767)
[»] chr4 (17 HSPs)
chr4 (216-263)||(20098777-20098824)
chr4 (216-267)||(16201969-16202020)
chr4 (209-257)||(17134123-17134171)
chr4 (209-257)||(54500567-54500615)
chr4 (216-263)||(29908048-29908095)
chr4 (216-255)||(40847089-40847128)
chr4 (216-263)||(44918235-44918282)
chr4 (216-258)||(21317360-21317402)
chr4 (240-270)||(42586003-42586033)
chr4 (218-255)||(14076577-14076614)
chr4 (216-257)||(45970729-45970770)
chr4 (216-261)||(48288007-48288052)
chr4 (216-264)||(13276120-13276168)
chr4 (216-256)||(19124644-19124684)
chr4 (216-268)||(21318275-21318327)
chr4 (209-257)||(38340335-38340383)
chr4 (216-252)||(41520957-41520993)
[»] chr1 (20 HSPs)
chr1 (211-262)||(16924471-16924522)
chr1 (209-264)||(17201221-17201276)
chr1 (209-263)||(6219877-6219931)
chr1 (216-262)||(15729423-15729469)
chr1 (216-261)||(2889948-2889993)
chr1 (209-262)||(30678828-30678881)
chr1 (209-257)||(36371055-36371103)
chr1 (216-263)||(7925356-7925403)
chr1 (210-265)||(10292926-10292981)
chr1 (209-255)||(33153895-33153941)
chr1 (216-257)||(9005677-9005718)
chr1 (216-257)||(24978242-24978283)
chr1 (216-257)||(29506825-29506866)
chr1 (221-266)||(40818596-40818641)
chr1 (211-264)||(44365965-44366018)
chr1 (209-257)||(3573339-3573387)
chr1 (209-257)||(17139532-17139580)
chr1 (216-264)||(32497503-32497551)
chr1 (209-257)||(50849088-50849136)
chr1 (216-264)||(52441533-52441581)
[»] chr8 (11 HSPs)
chr8 (216-262)||(40512652-40512698)
chr8 (193-257)||(37015835-37015899)
chr8 (209-257)||(16823200-16823248)
chr8 (222-256)||(2114886-2114920)
chr8 (216-257)||(17062361-17062402)
chr8 (216-257)||(17585956-17585997)
chr8 (216-257)||(42700503-42700544)
chr8 (209-257)||(3650518-3650566)
chr8 (216-256)||(15079174-15079214)
chr8 (216-264)||(23852902-23852950)
chr8 (217-257)||(43910902-43910942)
[»] chr2 (14 HSPs)
chr2 (209-257)||(27412851-27412899)
chr2 (210-264)||(8761580-8761634)
chr2 (216-257)||(36171526-36171567)
chr2 (216-264)||(7206116-7206164)
chr2 (216-263)||(35451265-35451312)
chr2 (216-266)||(37320539-37320589)
chr2 (216-270)||(45032678-45032732)
chr2 (209-254)||(10991543-10991588)
chr2 (216-261)||(11953940-11953985)
chr2 (216-257)||(13922654-13922695)
chr2 (216-257)||(22608525-22608566)
chr2 (216-257)||(31815909-31815950)
chr2 (209-257)||(15381631-15381679)
chr2 (209-257)||(29798532-29798580)
[»] chr6 (14 HSPs)
chr6 (216-257)||(331908-331949)
chr6 (216-272)||(21847177-21847233)
chr6 (216-263)||(5655329-5655376)
chr6 (216-263)||(8916496-8916543)
chr6 (219-262)||(27928134-27928177)
chr6 (209-255)||(2617220-2617266)
chr6 (216-262)||(12412270-12412316)
chr6 (216-257)||(8810638-8810679)
chr6 (209-258)||(16453352-16453401)
chr6 (211-271)||(2655044-2655104)
chr6 (216-252)||(6196465-6196501)
chr6 (211-263)||(6470633-6470685)
chr6 (209-257)||(16390427-16390475)
chr6 (209-257)||(17420733-17420781)
[»] chr3 (12 HSPs)
chr3 (216-261)||(12015732-12015776)
chr3 (209-257)||(7464506-7464554)
chr3 (216-257)||(2078238-2078279)
chr3 (216-257)||(27185475-27185516)
chr3 (209-258)||(29791773-29791822)
chr3 (216-265)||(33700465-33700514)
chr3 (216-257)||(52535887-52535928)
chr3 (209-257)||(2186442-2186490)
chr3 (216-264)||(7738660-7738708)
chr3 (216-256)||(10922330-10922370)
chr3 (216-264)||(19468442-19468490)
chr3 (216-252)||(46051911-46051947)
[»] chr5 (13 HSPs)
chr5 (216-256)||(16485985-16486025)
chr5 (216-256)||(35109399-35109439)
chr5 (209-260)||(12216980-12217031)
chr5 (211-254)||(12297596-12297639)
chr5 (209-264)||(40782347-40782402)
chr5 (209-263)||(1512847-1512901)
chr5 (216-262)||(33654741-33654787)
chr5 (209-262)||(2249431-2249484)
chr5 (209-261)||(29904414-29904467)
chr5 (216-265)||(30893923-30893972)
chr5 (228-261)||(36105170-36105203)
chr5 (211-255)||(9123862-9123906)
chr5 (216-264)||(19248470-19248518)
[»] scaffold1063 (1 HSPs)
scaffold1063 (209-262)||(1075-1128)
[»] scaffold0896 (1 HSPs)
scaffold0896 (216-257)||(3139-3180)
[»] scaffold0012 (1 HSPs)
scaffold0012 (222-262)||(240283-240323)


Alignment Details
Target: chr7 (Bit Score: 265; Significance: 1e-147; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 265; E-Value: 1e-147
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 28187812 - 28187477
Alignment:
Q  1 agtttccaatgtaaaataaacaaattaaaatagatttttacccttgtgttacaaattatgcaagttattcattgtgagctaaccaatagagtggttaata 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  28187812 agtttccaatgtaaaataaacaaattaaaatagatttttacccttgtgttacaaattatgcaagttattcattgtgagctatccaatagagtggttaata 28187713  T
Q  101 actctaattaaagatggattatttgggagaacttaaactcgaatttaggttaaaataatcattgatgaaactttaattatcnnnnnnnnnnngtggtggc 200  Q
    |||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||           |||||||     
T  28187712 actctaatcaaagatgaattatttgggagaacttaaactcaaatttaggttaaaataatcattgatcaaattttaattatc---ttttttttgtggtggt 28187616  T
Q  201 cgaggttcaccttaaatatattatgtattgtctctaccgactgagttaagctcacgaagacaaactttaattatctaaagatgaattaatagagtcaaat 300  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  28187615 cgaggttcaccttaaatatattatgtattgtctctaccaactgagttaagctcaagaagacaaactttaattatctaaagatgaattaatagagtcaaat 28187516  T
Q  301 atttctcttagaatttgagagttaagactaataaaaatt 339  Q
    |||||||||||||||||||||||||||||||||||||||    
T  28187515 atttctcttagaatttgagagttaagactaataaaaatt 28187477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 359 - 507
Target Start/End: Complemental strand, 28187483 - 28187335
Alignment:
Q  359 aaaaattttgtgcccccaacaagttaagggtaacatgtgaaattggtgagacgaagttggacaaggttccactatgtataatcatgatataaacaaaaac 458  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28187483 aaaaattttgtgcccccaacaagttaagggtaacatgtgaaattggtgagacgaagttggacaaggttccactatgtataatcatgatataaacaaaaac 28187384  T
Q  459 catccaatgaaagtgagaannnnnnntatggtggtcatgatgataggga 507  Q
    |||||||||||||||||||       |||||||||||||||||||||||    
T  28187383 catccaatgaaagtgagaagggggggtatggtggtcatgatgataggga 28187335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 209 - 255
Target Start/End: Complemental strand, 23221438 - 23221392
Alignment:
Q  209 accttaaatatattatgtattgtctctaccgactgagttaagctcac 255  Q
    |||||| |||||||||| |||||||||||| ||||||||||||||||    
T  23221438 accttacatatattatgcattgtctctaccaactgagttaagctcac 23221392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 211 - 264
Target Start/End: Complemental strand, 22267625 - 22267572
Alignment:
Q  211 cttaaatatattatgtattgtctctaccgactgagttaagctcacgaagacaaa 264  Q
    |||| |||||||||| |||||||||||| |||||||||| ||||||| ||||||    
T  22267625 cttacatatattatgcattgtctctaccaactgagttaaactcacgaggacaaa 22267572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 35001145 - 35001198
Alignment:
Q  209 accttaaatatattatgtattgtctctaccgactgagttaagctcacgaagaca 262  Q
    ||||||||||||||||| |||||||||||| | |||||||||||| ||| ||||    
T  35001145 accttaaatatattatgcattgtctctaccaaatgagttaagctcgcgatgaca 35001198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 213 - 262
Target Start/End: Complemental strand, 36803880 - 36803831
Alignment:
Q  213 taaatatattatgtattgtctctaccgactgagttaagctcacgaagaca 262  Q
    ||||||||||||| |||||||||||| |||||| ||||||||||| ||||    
T  36803880 taaatatattatgcattgtctctaccaactgagctaagctcacgaggaca 36803831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 264
Target Start/End: Original strand, 28200407 - 28200455
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacgaagacaaa 264  Q
    ||||||||||||||||  ||||| |||||||||||||||||| ||||||    
T  28200407 atatattatgtattgttcctaccaactgagttaagctcacgatgacaaa 28200455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 211 - 262
Target Start/End: Original strand, 964758 - 964809
Alignment:
Q  211 cttaaatatattatgtattgtctctaccgactgagttaagctcacgaagaca 262  Q
    |||| |||||||||| ||||| |||| |||||||||||||||||||| ||||    
T  964758 cttatatatattatgcattgtttctatcgactgagttaagctcacgaggaca 964809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 265
Target Start/End: Complemental strand, 23147323 - 23147277
Alignment:
Q  219 tattatgtattgtctctaccgactgagttaagctcacgaagacaaac 265  Q
    |||||||||||||| ||||| |||||| ||| |||||||||||||||    
T  23147323 tattatgtattgtccctaccaactgaggtaaactcacgaagacaaac 23147277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 209 - 263
Target Start/End: Complemental strand, 24839534 - 24839480
Alignment:
Q  209 accttaaatatattatgtattgtctctaccgactgagttaagctcacgaagacaa 263  Q
    |||||| |||| ||||| ||||||| |||| |||||||||||||||||| |||||    
T  24839534 accttacatattttatgcattgtctataccaactgagttaagctcacgaggacaa 24839480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 7388054 - 7388107
Alignment:
Q  209 accttaaatatattatgtattgtctctaccgactgagttaagctcacgaagaca 262  Q
    |||||| |||||||||| |||||| | ||| |||||||||||||||||| ||||    
T  7388054 accttacatatattatgcattgtcccaaccaactgagttaagctcacgaggaca 7388107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 257
Target Start/End: Original strand, 8879769 - 8879810
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacga 257  Q
    |||||||||| ||||||| |||| ||||||||||||||||||    
T  8879769 atatattatgcattgtctataccaactgagttaagctcacga 8879810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 262
Target Start/End: Complemental strand, 25251556 - 25251503
Alignment:
Q  209 accttaaatatattatgtattgtctctaccgactgagttaagctcacgaagaca 262  Q
    |||||| |||||||||| ||||| | |||| ||||||||||||||||| |||||    
T  25251556 accttatatatattatgcattgtttataccaactgagttaagctcacggagaca 25251503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 262
Target Start/End: Complemental strand, 36755060 - 36755008
Alignment:
Q  209 accttaaatatattatgtattgtctctaccgactgagttaagctcacgaagaca 262  Q
    |||||| |||||||||| |||||| ||||| |||||||||||||||||| ||||    
T  36755060 accttacatatattatgcattgtc-ctaccaactgagttaagctcacgaggaca 36755008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 262
Target Start/End: Complemental strand, 36760857 - 36760805
Alignment:
Q  209 accttaaatatattatgtattgtctctaccgactgagttaagctcacgaagaca 262  Q
    |||||| |||||||||| |||||| ||||| |||||||||||||||||| ||||    
T  36760857 accttacatatattatgcattgtc-ctaccaactgagttaagctcacgaggaca 36760805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Original strand, 40187651 - 40187696
Alignment:
Q  209 accttaaatatattatgtattgtctctaccgactgagttaagctca 254  Q
    |||||| |||||||||| |||||| ||||| |||||||||||||||    
T  40187651 accttacatatattatgcattgtccctaccaactgagttaagctca 40187696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 42043081 - 42043134
Alignment:
Q  209 accttaaatatattatgtattgtctctaccgactgagttaagctcacgaagaca 262  Q
    ||||||||||||||||| ||||||  |||| |||||| ||||||||| ||||||    
T  42043081 accttaaatatattatgcattgtccataccaactgagctaagctcacaaagaca 42043134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 266
Target Start/End: Original strand, 46220977 - 46221022
Alignment:
Q  221 ttatgtattgtctctaccgactgagttaagctcacgaagacaaact 266  Q
    ||||| ||||||  |||| |||||||||||||||||||||||||||    
T  46220977 ttatgcattgtccataccaactgagttaagctcacgaagacaaact 46221022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 6915962 - 6916010
Alignment:
Q  213 taaatatattatgtattgtctctaccgactgagttaagctcacgaagac 261  Q
    ||||||||||||||| | || ||||| | ||||||||||||||||||||    
T  6915962 taaatatattatgtaatatccctacctattgagttaagctcacgaagac 6916010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 257
Target Start/End: Original strand, 7994899 - 7994947
Alignment:
Q  209 accttaaatatattatgtattgtctctaccgactgagttaagctcacga 257  Q
    |||||| ||||||||||| ||||| ||||| ||||||||| ||||||||    
T  7994899 accttacatatattatgttttgtccctaccaactgagttatgctcacga 7994947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 257
Target Start/End: Complemental strand, 16355559 - 16355511
Alignment:
Q  209 accttaaatatattatgtattgtctctaccgactgagttaagctcacga 257  Q
    |||||| |||||||||  | |||||||||| ||||||||||||||||||    
T  16355559 accttacatatattatacaatgtctctaccaactgagttaagctcacga 16355511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 264
Target Start/End: Original strand, 20085781 - 20085828
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacgaagacaaa 264  Q
    |||||||||| ||||||| ||||||||||||||| ||||||| ||||||    
T  20085781 atatattatgcattgtct-taccgactgagttaaactcacgaggacaaa 20085828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 264
Target Start/End: Original strand, 22062435 - 22062483
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacgaagacaaa 264  Q
    |||||||||||||||||  |||| | |||||||||||||||| ||||||    
T  22062435 atatattatgtattgtccttaccaattgagttaagctcacgaggacaaa 22062483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 27432336 - 27432376
Alignment:
Q  217 tatattatgtattgtctctaccgactgagttaagctcacga 257  Q
    ||||||||||||| |||||||| |||||| |||||||||||    
T  27432336 tatattatgtattttctctaccaactgagctaagctcacga 27432376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 37167767 - 37167731
Alignment:
Q  228 ttgtctctaccgactgagttaagctcacgaagacaaa 264  Q
    ||||||||||| |||||||||||||||| ||||||||    
T  37167767 ttgtctctaccaactgagttaagctcacaaagacaaa 37167731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 263
Target Start/End: Original strand, 20098777 - 20098824
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacgaagacaa 263  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||    
T  20098777 atatattatgtattgtctctgccaactgagttaagctcacgaagacaa 20098824  T

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Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 267
Target Start/End: Original strand, 16201969 - 16202020
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacgaagacaaactt 267  Q
    ||||||||||||||||||||||| | || ||||||||||| |||||||||||    
T  16201969 atatattatgtattgtctctaccaattgtgttaagctcacaaagacaaactt 16202020  T

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Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 257
Target Start/End: Complemental strand, 17134171 - 17134123
Alignment:
Q  209 accttaaatatattatgtattgtctctaccgactgagttaagctcacga 257  Q
    |||||| |||||||||| |||||||||||| | ||||||||||||||||    
T  17134171 accttatatatattatgcattgtctctaccaattgagttaagctcacga 17134123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 257
Target Start/End: Complemental strand, 54500615 - 54500567
Alignment:
Q  209 accttaaatatattatgtattgtctctaccgactgagttaagctcacga 257  Q
    |||||| |||||||||| |||||||||||| |||||| |||||||||||    
T  54500615 accttacatatattatgcattgtctctaccaactgagctaagctcacga 54500567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 263
Target Start/End: Complemental strand, 29908095 - 29908048
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacgaagacaa 263  Q
    |||||||||| ||||||  |||| ||||||||||||||||||||||||    
T  29908095 atatattatgcattgtccttaccaactgagttaagctcacgaagacaa 29908048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 255
Target Start/End: Original strand, 40847089 - 40847128
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcac 255  Q
    ||||||||||||||||||||| | ||||||||||||||||    
T  40847089 atatattatgtattgtctctatcaactgagttaagctcac 40847128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 263
Target Start/End: Original strand, 44918235 - 44918282
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacgaagacaa 263  Q
    ||||||||| ||||||||||| | |||||||||| |||||||||||||    
T  44918235 atatattatatattgtctctatcaactgagttaaactcacgaagacaa 44918282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 216 - 258
Target Start/End: Original strand, 21317360 - 21317402
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacgaa 258  Q
    |||||||||| |||||||||||| |||||| ||||||||||||    
T  21317360 atatattatgcattgtctctaccaactgagctaagctcacgaa 21317402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 240 - 270
Target Start/End: Original strand, 42586003 - 42586033
Alignment:
Q  240 actgagttaagctcacgaagacaaactttaa 270  Q
    |||||||||||||||||||||||||||||||    
T  42586003 actgagttaagctcacgaagacaaactttaa 42586033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 255
Target Start/End: Original strand, 14076577 - 14076614
Alignment:
Q  218 atattatgtattgtctctaccgactgagttaagctcac 255  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  14076577 atattatgtattgtctctactaactgagttaagctcac 14076614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 257
Target Start/End: Original strand, 45970729 - 45970770
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacga 257  Q
    |||||||||| ||||| |||||| ||||||||||||||||||    
T  45970729 atatattatgcattgtttctaccaactgagttaagctcacga 45970770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 261
Target Start/End: Original strand, 48288007 - 48288052
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacgaagac 261  Q
    |||||||||||||| | |||||| |||||||||||| |||||||||    
T  48288007 atatattatgtattatttctaccaactgagttaagcccacgaagac 48288052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 264
Target Start/End: Complemental strand, 13276168 - 13276120
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacgaagacaaa 264  Q
    |||||||||| |||||| ||||| | |||||||||||||||| ||||||    
T  13276168 atatattatgcattgtccctaccaattgagttaagctcacgaggacaaa 13276120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 256
Target Start/End: Original strand, 19124644 - 19124684
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacg 256  Q
    |||||||||||||||||| || | |||||||||||||||||    
T  19124644 atatattatgtattgtctttatcaactgagttaagctcacg 19124684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 268
Target Start/End: Original strand, 21318275 - 21318327
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacgaagacaaacttt 268  Q
    |||||||||| |||||| ||||| |||||||||||||| ||| |||| |||||    
T  21318275 atatattatgcattgtccctaccaactgagttaagctcgcgaggacatacttt 21318327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 257
Target Start/End: Original strand, 38340335 - 38340383
Alignment:
Q  209 accttaaatatattatgtattgtctctaccgactgagttaagctcacga 257  Q
    |||||| |||| ||||||||||||  |||| ||||||||||||||||||    
T  38340335 accttacatattttatgtattgtccataccaactgagttaagctcacga 38340383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 252
Target Start/End: Complemental strand, 41520993 - 41520957
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagct 252  Q
    |||||||||| |||||||||||| |||||||||||||    
T  41520993 atatattatgcattgtctctaccaactgagttaagct 41520957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 211 - 262
Target Start/End: Complemental strand, 16924522 - 16924471
Alignment:
Q  211 cttaaatatattatgtattgtctctaccgactgagttaagctcacgaagaca 262  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||| ||||    
T  16924522 cttacatatattatgtattgtctccaccgactgagttaagctcacgaggaca 16924471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 17201221 - 17201276
Alignment:
Q  209 accttaaatatattatgtattgtctctaccgactgagttaagctcacgaagacaaa 264  Q
    |||||||||||||||||||||||| ||||| |||||| |||| |||||| ||||||    
T  17201221 accttaaatatattatgtattgtccctaccaactgagctaagttcacgaggacaaa 17201276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 209 - 263
Target Start/End: Original strand, 6219877 - 6219931
Alignment:
Q  209 accttaaatatattatgtattgtctctaccgactgagttaagctcacgaagacaa 263  Q
    |||||| ||||||||||||||||| ||||| || ||||||||||||||| |||||    
T  6219877 accttacatatattatgtattgtccctaccaaccgagttaagctcacgaggacaa 6219931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 262
Target Start/End: Complemental strand, 15729469 - 15729423
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacgaagaca 262  Q
    |||||||||| |||||||||||| |||||||||||||||||| ||||    
T  15729469 atatattatgcattgtctctaccaactgagttaagctcacgaggaca 15729423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 216 - 261
Target Start/End: Original strand, 2889948 - 2889993
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacgaagac 261  Q
    |||||||||| |||||| ||||| ||||||||||||||||||||||    
T  2889948 atatattatgcattgtccctaccaactgagttaagctcacgaagac 2889993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 30678828 - 30678881
Alignment:
Q  209 accttaaatatattatgtattgtctctaccgactgagttaagctcacgaagaca 262  Q
    |||||| |||||||||| |||||| ||||| |||||||||||||||||| ||||    
T  30678828 accttacatatattatgcattgtccctaccaactgagttaagctcacgaggaca 30678881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 257
Target Start/End: Original strand, 36371055 - 36371103
Alignment:
Q  209 accttaaatatattatgtattgtctctaccgactgagttaagctcacga 257  Q
    |||||| |||||||||| |||||||||||| |||||| |||||||||||    
T  36371055 accttacatatattatgcattgtctctaccaactgagctaagctcacga 36371103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 263
Target Start/End: Complemental strand, 7925403 - 7925356
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacgaagacaa 263  Q
    |||||||||| |||||||||||| |||||| ||||||||||| |||||    
T  7925403 atatattatgcattgtctctaccaactgagctaagctcacgaggacaa 7925356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 265
Target Start/End: Complemental strand, 10292981 - 10292926
Alignment:
Q  210 ccttaaatatattatgtattgtctctaccgactgagttaagctcacgaagacaaac 265  Q
    ||||| |||||||||| |||||| ||| | ||||||||||||||||| ||||||||    
T  10292981 ccttacatatattatgcattgtccctatcaactgagttaagctcacggagacaaac 10292926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 209 - 255
Target Start/End: Original strand, 33153895 - 33153941
Alignment:
Q  209 accttaaatatattatgtattgtctctaccgactgagttaagctcac 255  Q
    |||||| |||||||||| |||||| ||||| ||||||||||||||||    
T  33153895 accttacatatattatgcattgtccctaccaactgagttaagctcac 33153941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 9005718 - 9005677
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacga 257  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||    
T  9005718 atatattatgtattgtccctaccaactgagttaagcttacga 9005677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 24978283 - 24978242
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacga 257  Q
    |||||||||||||| ||| |||| ||||||||||||||||||    
T  24978283 atatattatgtattatctataccaactgagttaagctcacga 24978242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 29506866 - 29506825
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacga 257  Q
    |||||||||||||||||| |||| ||| ||||||||||||||    
T  29506866 atatattatgtattgtctataccaactaagttaagctcacga 29506825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 266
Target Start/End: Complemental strand, 40818641 - 40818596
Alignment:
Q  221 ttatgtattgtctctaccgactgagttaagctcacgaagacaaact 266  Q
    ||||| |||||||||||  |||||||||||||||||| ||||||||    
T  40818641 ttatgcattgtctctactaactgagttaagctcacgaggacaaact 40818596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 44365965 - 44366018
Alignment:
Q  211 cttaaatatattatgtattgtctctaccgactgagttaagctcacgaagacaaa 264  Q
    |||| ||||||||||||||||  ||||| |||||||||| ||||||| ||||||    
T  44365965 cttacatatattatgtattgttcctaccaactgagttaaactcacgaggacaaa 44366018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 257
Target Start/End: Original strand, 3573339 - 3573387
Alignment:
Q  209 accttaaatatattatgtattgtctctaccgactgagttaagctcacga 257  Q
    |||||| |||||||||| |||||  ||||| ||||||||||||||||||    
T  3573339 accttacatatattatgcattgttcctaccaactgagttaagctcacga 3573387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 257
Target Start/End: Original strand, 17139532 - 17139580
Alignment:
Q  209 accttaaatatattatgtattgtctctaccgactgagttaagctcacga 257  Q
    ||||| ||||||||||| |||||| ||||| |||||| |||||||||||    
T  17139532 accttgaatatattatgcattgtccctaccaactgagctaagctcacga 17139580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 264
Target Start/End: Original strand, 32497503 - 32497551
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacgaagacaaa 264  Q
    |||||||||| |||||  ||||| ||||||||||||| |||||||||||    
T  32497503 atatattatgcattgttcctaccaactgagttaagctaacgaagacaaa 32497551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 257
Target Start/End: Original strand, 50849088 - 50849136
Alignment:
Q  209 accttaaatatattatgtattgtctctaccgactgagttaagctcacga 257  Q
    |||||| |||||||||| ||||||  |||| ||||||||||||||||||    
T  50849088 accttacatatattatgcattgtcattaccaactgagttaagctcacga 50849136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 264
Target Start/End: Original strand, 52441533 - 52441581
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacgaagacaaa 264  Q
    |||||||||| ||||||| |||| |||||| ||||||||||| ||||||    
T  52441533 atatattatgcattgtctataccaactgagctaagctcacgaggacaaa 52441581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 216 - 262
Target Start/End: Original strand, 40512652 - 40512698
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacgaagaca 262  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||    
T  40512652 atatattatgtattgtctctaccaactgagttaagctcacaaagaca 40512698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 193 - 257
Target Start/End: Original strand, 37015835 - 37015899
Alignment:
Q  193 gtggtggccgaggttcaccttaaatatattatgtattgtctctaccgactgagttaagctcacga 257  Q
    ||||||| || ||||||||||  |||||||||| |||||||||||| |||||| |||||||||||    
T  37015835 gtggtggtcgcggttcaccttgcatatattatgcattgtctctaccaactgagctaagctcacga 37015899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 257
Target Start/End: Original strand, 16823200 - 16823248
Alignment:
Q  209 accttaaatatattatgtattgtctctaccgactgagttaagctcacga 257  Q
    |||||| ||||||||||||| |||| |||| ||||||||||||||||||    
T  16823200 accttacatatattatgtatagtctataccaactgagttaagctcacga 16823248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 256
Target Start/End: Complemental strand, 2114920 - 2114886
Alignment:
Q  222 tatgtattgtctctaccgactgagttaagctcacg 256  Q
    ||||||||||||||||| |||||||||||||||||    
T  2114920 tatgtattgtctctaccaactgagttaagctcacg 2114886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 257
Target Start/End: Original strand, 17062361 - 17062402
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacga 257  Q
    |||||||||||||||||| || | ||||||||||||||||||    
T  17062361 atatattatgtattgtctatatcaactgagttaagctcacga 17062402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 17585997 - 17585956
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacga 257  Q
    |||||||||||||||||| || | ||||||||||||||||||    
T  17585997 atatattatgtattgtctatatcaactgagttaagctcacga 17585956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 42700544 - 42700503
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacga 257  Q
    |||||||||| |||||||||||| || |||||||||||||||    
T  42700544 atatattatgcattgtctctaccaaccgagttaagctcacga 42700503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 257
Target Start/End: Complemental strand, 3650566 - 3650518
Alignment:
Q  209 accttaaatatattatgtattgtctctaccgactgagttaagctcacga 257  Q
    |||||| |||||||||| ||| | |||||| ||||||||||||||||||    
T  3650566 accttacatatattatgcattttttctaccaactgagttaagctcacga 3650518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 256
Target Start/End: Original strand, 15079174 - 15079214
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacg 256  Q
    |||||||||| |||||| ||||| |||||||||||||||||    
T  15079174 atatattatgcattgtccctaccaactgagttaagctcacg 15079214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 264
Target Start/End: Complemental strand, 23852950 - 23852902
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacgaagacaaa 264  Q
    |||||||||| ||||||  ||||||||||| ||||||||||| ||||||    
T  23852950 atatattatgcattgtccataccgactgagctaagctcacgaggacaaa 23852902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 43910942 - 43910902
Alignment:
Q  217 tatattatgtattgtctctaccgactgagttaagctcacga 257  Q
    ||||||||| |||||| ||||| ||||||||||||||||||    
T  43910942 tatattatgcattgtcgctaccaactgagttaagctcacga 43910902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.00000000001; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 257
Target Start/End: Original strand, 27412851 - 27412899
Alignment:
Q  209 accttaaatatattatgtattgtctctaccgactgagttaagctcacga 257  Q
    |||||| |||||||||| |||||||||||| ||||||||||||||||||    
T  27412851 accttacatatattatgcattgtctctaccaactgagttaagctcacga 27412899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 210 - 264
Target Start/End: Original strand, 8761580 - 8761634
Alignment:
Q  210 ccttaaatatattatgtattgtctctaccgactgagttaagctcacgaagacaaa 264  Q
    ||||| |||||||||||||||||  |||| |||||||||||||||||| ||||||    
T  8761580 ccttacatatattatgtattgtccataccaactgagttaagctcacgaggacaaa 8761634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 36171567 - 36171526
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacga 257  Q
    ||||||||||||||||| ||||| ||||||||||||||||||    
T  36171567 atatattatgtattgtccctaccaactgagttaagctcacga 36171526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 264
Target Start/End: Complemental strand, 7206164 - 7206116
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacgaagacaaa 264  Q
    |||||||||| |||||||||||| |||||| ||||||||||| ||||||    
T  7206164 atatattatgcattgtctctaccaactgagctaagctcacgaggacaaa 7206116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 263
Target Start/End: Original strand, 35451265 - 35451312
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacgaagacaa 263  Q
    ||||||||||||||||||||||| |||||| ||| || ||||||||||    
T  35451265 atatattatgtattgtctctaccaactgagctaaccttacgaagacaa 35451312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 216 - 266
Target Start/End: Original strand, 37320539 - 37320589
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacgaagacaaact 266  Q
    |||||||||| ||||||| |||| |||||||||||||||||  ||||||||    
T  37320539 atatattatgcattgtctttaccaactgagttaagctcacgtggacaaact 37320589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 216 - 270
Target Start/End: Complemental strand, 45032732 - 45032678
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacgaagacaaactttaa 270  Q
    |||||||||| |||||| ||||| |||||| ||||||||||| |||||| |||||    
T  45032732 atatattatgcattgtccctaccaactgaggtaagctcacgaggacaaattttaa 45032678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 10991588 - 10991543
Alignment:
Q  209 accttaaatatattatgtattgtctctaccgactgagttaagctca 254  Q
    |||||| |||||||||||||||||  |||| |||||||||||||||    
T  10991588 accttacatatattatgtattgtccttaccaactgagttaagctca 10991543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 261
Target Start/End: Complemental strand, 11953985 - 11953940
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacgaagac 261  Q
    ||||||||||||||||| ||||| |||||| | |||||||||||||    
T  11953985 atatattatgtattgtccctaccaactgagcttagctcacgaagac 11953940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 257
Target Start/End: Original strand, 13922654 - 13922695
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacga 257  Q
    |||||||||| |||||| ||||| ||||||||||||||||||    
T  13922654 atatattatgcattgtccctaccaactgagttaagctcacga 13922695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 22608566 - 22608525
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacga 257  Q
    |||||||||| |||||||||||| |||||| |||||||||||    
T  22608566 atatattatgcattgtctctaccaactgagctaagctcacga 22608525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 257
Target Start/End: Original strand, 31815909 - 31815950
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacga 257  Q
    |||||||||| |||||| ||||| ||||||||||||||||||    
T  31815909 atatattatgcattgtccctaccaactgagttaagctcacga 31815950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 257
Target Start/End: Complemental strand, 15381679 - 15381631
Alignment:
Q  209 accttaaatatattatgtattgtctctaccgactgagttaagctcacga 257  Q
    |||||| ||||||||||||||||| ||||  |||||| |||||||||||    
T  15381679 accttacatatattatgtattgtccctactaactgagctaagctcacga 15381631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 257
Target Start/End: Original strand, 29798532 - 29798580
Alignment:
Q  209 accttaaatatattatgtattgtctctaccgactgagttaagctcacga 257  Q
    ||||||||||| ||||| ||||||  |||| ||||||||||||||||||    
T  29798532 accttaaatattttatgcattgtccataccaactgagttaagctcacga 29798580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000007; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 216 - 257
Target Start/End: Original strand, 331908 - 331949
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacga 257  Q
    |||||||||| |||||||||||| ||||||||||||||||||    
T  331908 atatattatgcattgtctctaccaactgagttaagctcacga 331949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 272
Target Start/End: Complemental strand, 21847233 - 21847177
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacgaagacaaactttaatt 272  Q
    ||||||||||||||||| ||||| |||||| |||||||| || |||| |||||||||    
T  21847233 atatattatgtattgtccctaccaactgagctaagctcaagaggacacactttaatt 21847177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 263
Target Start/End: Original strand, 5655329 - 5655376
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacgaagacaa 263  Q
    ||||||||||||||||| ||||| |||||| ||||||||||| |||||    
T  5655329 atatattatgtattgtccctaccaactgagctaagctcacgaggacaa 5655376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 263
Target Start/End: Original strand, 8916496 - 8916543
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacgaagacaa 263  Q
    ||||||||||||||||| ||||| |||||||| ||||||||| |||||    
T  8916496 atatattatgtattgtccctaccaactgagtttagctcacgaggacaa 8916543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 219 - 262
Target Start/End: Original strand, 27928134 - 27928177
Alignment:
Q  219 tattatgtattgtctctaccgactgagttaagctcacgaagaca 262  Q
    |||||||||||||||||||| |||||||||| ||||||| ||||    
T  27928134 tattatgtattgtctctaccaactgagttaaactcacgaggaca 27928177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 209 - 255
Target Start/End: Original strand, 2617220 - 2617266
Alignment:
Q  209 accttaaatatattatgtattgtctctaccgactgagttaagctcac 255  Q
    |||||| |||||||||| |||||||||||| ||| ||||||||||||    
T  2617220 accttacatatattatgcattgtctctaccaactaagttaagctcac 2617266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 216 - 262
Target Start/End: Complemental strand, 12412316 - 12412270
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacgaagaca 262  Q
    |||||||||| |||||||||||| ||| |||||||||||||| ||||    
T  12412316 atatattatgcattgtctctaccaactaagttaagctcacgaggaca 12412270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 8810679 - 8810638
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacga 257  Q
    |||||||||||||||||| |||| |||||| |||||||||||    
T  8810679 atatattatgtattgtctttaccaactgagctaagctcacga 8810638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 258
Target Start/End: Original strand, 16453352 - 16453401
Alignment:
Q  209 accttaaatatattatgtattgtctctaccgactgagttaagctcacgaa 258  Q
    |||||| ||||||||||||||||| ||||| |||||| ||| ||||||||    
T  16453352 accttacatatattatgtattgtccctaccaactgagataaactcacgaa 16453401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 211 - 271
Target Start/End: Original strand, 2655044 - 2655104
Alignment:
Q  211 cttaaatatattatgtattgtctctaccgactgagttaagctcacgaagacaaactttaat 271  Q
    |||| |||| ||||| |||||| | ||  ||||||||||||||||||||||| ||||||||    
T  2655044 cttacatattttatgcattgtcccaacaaactgagttaagctcacgaagacacactttaat 2655104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 252
Target Start/End: Original strand, 6196465 - 6196501
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagct 252  Q
    |||||||||||||||||  ||||||||||||||||||    
T  6196465 atatattatgtattgtccttaccgactgagttaagct 6196501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 211 - 263
Target Start/End: Original strand, 6470633 - 6470685
Alignment:
Q  211 cttaaatatattatgtattgtctctaccgactgagttaagctcacgaagacaa 263  Q
    |||| |||||||||| ||||||| || | ||||||||||||||||| ||||||    
T  6470633 cttacatatattatgcattgtctttatcaactgagttaagctcacggagacaa 6470685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 257
Target Start/End: Complemental strand, 16390475 - 16390427
Alignment:
Q  209 accttaaatatattatgtattgtctctaccgactgagttaagctcacga 257  Q
    |||||| |||||||||| |||||| ||||| |||||| |||||||||||    
T  16390475 accttacatatattatgcattgtccctaccaactgaggtaagctcacga 16390427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 257
Target Start/End: Original strand, 17420733 - 17420781
Alignment:
Q  209 accttaaatatattatgtattgtctctaccgactgagttaagctcacga 257  Q
    |||||| |||||||||||||||| | |||| ||||||||||||| ||||    
T  17420733 accttacatatattatgtattgtttataccaactgagttaagcttacga 17420781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000007; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 216 - 261
Target Start/End: Complemental strand, 12015776 - 12015732
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacgaagac 261  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||    
T  12015776 atatattatgtattgtccctacc-actgagttaagctcacgaagac 12015732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 257
Target Start/End: Original strand, 7464506 - 7464554
Alignment:
Q  209 accttaaatatattatgtattgtctctaccgactgagttaagctcacga 257  Q
    |||||| |||||||||| |||||| ||||| ||||||||||||||||||    
T  7464506 accttacatatattatgcattgtccctaccaactgagttaagctcacga 7464554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 2078279 - 2078238
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacga 257  Q
    |||||||||| |||||||||||| ||||||||||| ||||||    
T  2078279 atatattatgcattgtctctaccaactgagttaagttcacga 2078238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 27185516 - 27185475
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacga 257  Q
    ||||||||||||||||| ||||| |||||| |||||||||||    
T  27185516 atatattatgtattgtccctaccaactgagctaagctcacga 27185475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 258
Target Start/End: Complemental strand, 29791822 - 29791773
Alignment:
Q  209 accttaaatatattatgtattgtctctaccgactgagttaagctcacgaa 258  Q
    |||||| |||||||||||||||| |||| | |||||||||| ||||||||    
T  29791822 accttacatatattatgtattgtttctatcaactgagttaaactcacgaa 29791773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 265
Target Start/End: Complemental strand, 33700514 - 33700465
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacgaagacaaac 265  Q
    |||||||||| | |||| ||||| | ||||||||||||||||||||||||    
T  33700514 atatattatgaaatgtccctaccaaatgagttaagctcacgaagacaaac 33700465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 257
Target Start/End: Original strand, 52535887 - 52535928
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacga 257  Q
    |||||||||||||||||| |||  ||||||||||||||||||    
T  52535887 atatattatgtattgtctatactaactgagttaagctcacga 52535928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 209 - 257
Target Start/End: Original strand, 2186442 - 2186490
Alignment:
Q  209 accttaaatatattatgtattgtctctaccgactgagttaagctcacga 257  Q
    |||||| |||||||||||||||||  |||| ||||||||||| ||||||    
T  2186442 accttacatatattatgtattgtccataccaactgagttaagttcacga 2186490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 264
Target Start/End: Complemental strand, 7738708 - 7738660
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacgaagacaaa 264  Q
    |||| ||||| |||||| ||||| |||||||||||||||||| ||||||    
T  7738708 atattttatgcattgtccctaccaactgagttaagctcacgaggacaaa 7738660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 256
Target Start/End: Original strand, 10922330 - 10922370
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacg 256  Q
    |||||||||| |||||| ||||| |||||||||||||||||    
T  10922330 atatattatgcattgtccctaccaactgagttaagctcacg 10922370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 264
Target Start/End: Complemental strand, 19468490 - 19468442
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacgaagacaaa 264  Q
    |||||||||| ||||||  |||| |||||||||||||||| ||||||||    
T  19468490 atatattatgcattgtccataccaactgagttaagctcacaaagacaaa 19468442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 252
Target Start/End: Complemental strand, 46051947 - 46051911
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagct 252  Q
    |||||||||||||||||| |||| |||||||||||||    
T  46051947 atatattatgtattgtctataccaactgagttaagct 46051911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000003; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 256
Target Start/End: Original strand, 16485985 - 16486025
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacg 256  Q
    |||||||||||||||||| |||||||| |||||||||||||    
T  16485985 atatattatgtattgtctttaccgacttagttaagctcacg 16486025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 256
Target Start/End: Complemental strand, 35109439 - 35109399
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacg 256  Q
    |||||||||||||||||| |||| |||||||||||||||||    
T  35109439 atatattatgtattgtctttaccaactgagttaagctcacg 35109399  T

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Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 260
Target Start/End: Original strand, 12216980 - 12217031
Alignment:
Q  209 accttaaatatattatgtattgtctctaccgactgagttaagctcacgaaga 260  Q
    |||||| ||||||||||||||||||||||| |||||| | || |||||||||    
T  12216980 accttatatatattatgtattgtctctaccaactgagctgagttcacgaaga 12217031  T

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Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 211 - 254
Target Start/End: Complemental strand, 12297639 - 12297596
Alignment:
Q  211 cttaaatatattatgtattgtctctaccgactgagttaagctca 254  Q
    |||| ||||||||||||||||||||||| ||||||| |||||||    
T  12297639 cttacatatattatgtattgtctctaccaactgagtcaagctca 12297596  T

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Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 40782402 - 40782347
Alignment:
Q  209 accttaaatatattatgtattgtctctaccgactgagttaagctcacgaagacaaa 264  Q
    |||||| ||||||||||||||||  |||  ||||||||||||||||||| ||||||    
T  40782402 accttacatatattatgtattgttcctattgactgagttaagctcacgatgacaaa 40782347  T

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Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 209 - 263
Target Start/End: Complemental strand, 1512901 - 1512847
Alignment:
Q  209 accttaaatatattatgtattgtctctaccgactgagttaagctcacgaagacaa 263  Q
    |||||| |||||||||| |||||| ||||  |||||||||||||||||| |||||    
T  1512901 accttacatatattatgcattgtccctactaactgagttaagctcacgaggacaa 1512847  T

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Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 216 - 262
Target Start/End: Complemental strand, 33654787 - 33654741
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacgaagaca 262  Q
    |||||||||| |||||| ||||| |||||||||||||||||| ||||    
T  33654787 atatattatgcattgtccctaccaactgagttaagctcacgatgaca 33654741  T

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Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 2249431 - 2249484
Alignment:
Q  209 accttaaatatattatgtattgtctctaccgactgagttaagctcacgaagaca 262  Q
    |||||| |||||||||||||||||  |||  |||||||||||||||||| ||||    
T  2249431 accttacatatattatgtattgtccttactaactgagttaagctcacgaggaca 2249484  T

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Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 261
Target Start/End: Complemental strand, 29904467 - 29904414
Alignment:
Q  209 accttaaatatattatgtattgtctcta-ccgactgagttaagctcacgaagac 261  Q
    |||||| |||||||||||||||||  || || ||||||||||||||||||||||    
T  29904467 accttacatatattatgtattgtccttaaccaactgagttaagctcacgaagac 29904414  T

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Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 265
Target Start/End: Complemental strand, 30893972 - 30893923
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacgaagacaaac 265  Q
    |||||||||| ||||||| |||  |||||||||||||||||| |||||||    
T  30893972 atatattatgcattgtctttacaaactgagttaagctcacgaggacaaac 30893923  T

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Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 261
Target Start/End: Complemental strand, 36105203 - 36105170
Alignment:
Q  228 ttgtctctaccgactgagttaagctcacgaagac 261  Q
    ||||||||||| ||||||||||||||||||||||    
T  36105203 ttgtctctaccaactgagttaagctcacgaagac 36105170  T

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Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 211 - 255
Target Start/End: Original strand, 9123862 - 9123906
Alignment:
Q  211 cttaaatatattatgtattgtctctaccgactgagttaagctcac 255  Q
    |||| |||||||||| ||||||| |||| ||||||||||||||||    
T  9123862 cttacatatattatgcattgtctttaccaactgagttaagctcac 9123906  T

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Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 264
Target Start/End: Complemental strand, 19248518 - 19248470
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacgaagacaaa 264  Q
    |||||||||| ||||||| |||| |||||| ||||||||||| ||||||    
T  19248518 atatattatgcattgtctataccaactgagctaagctcacgaggacaaa 19248470  T

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Target: scaffold1063 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1063
Description:

Target: scaffold1063; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 262
Target Start/End: Original strand, 1075 - 1128
Alignment:
Q  209 accttaaatatattatgtattgtctctaccgactgagttaagctcacgaagaca 262  Q
    |||||| |||||||||| |||||| ||||  |||||||||||||||||| ||||    
T  1075 accttacatatattatgcattgtccctactaactgagttaagctcacgatgaca 1128  T

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Target: scaffold0896 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0896
Description:

Target: scaffold0896; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 3180 - 3139
Alignment:
Q  216 atatattatgtattgtctctaccgactgagttaagctcacga 257  Q
    |||||||||||||||||| |||| |||||| |||||||||||    
T  3180 atatattatgtattgtctttaccaactgagctaagctcacga 3139  T

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Target: scaffold0012 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 240283 - 240323
Alignment:
Q  222 tatgtattgtctctaccgactgagttaagctcacgaagaca 262  Q
    |||| |||||||||||| |||||||||||||||||| ||||    
T  240283 tatgcattgtctctaccaactgagttaagctcacgatgaca 240323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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