View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10154_high_17 (Length: 212)

Name: NF10154_high_17
Description: NF10154
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10154_high_17
NF10154_high_17
[»] chr8 (4 HSPs)
chr8 (87-166)||(3068778-3068857)
chr8 (87-166)||(3069066-3069145)
chr8 (87-166)||(3305623-3305702)
chr8 (87-166)||(3305911-3305990)
[»] chr4 (13 HSPs)
chr4 (87-166)||(23254669-23254748)
chr4 (87-166)||(15874232-15874311)
chr4 (87-166)||(41315903-41315982)
chr4 (87-163)||(38484465-38484541)
chr4 (87-166)||(23254381-23254460)
chr4 (87-166)||(42305909-42305988)
chr4 (87-166)||(42306196-42306275)
chr4 (87-163)||(55893466-55893542)
chr4 (96-166)||(20878706-20878776)
chr4 (87-165)||(41316192-41316269)
chr4 (95-164)||(15874522-15874591)
chr4 (87-158)||(55893218-55893289)
chr4 (87-151)||(38485175-38485239)
[»] chr3 (10 HSPs)
chr3 (87-166)||(20124659-20124738)
chr3 (87-166)||(33794438-33794517)
chr3 (87-166)||(40560751-40560830)
chr3 (87-166)||(5048008-5048087)
chr3 (95-166)||(2440062-2440133)
chr3 (87-166)||(5048296-5048375)
chr3 (87-166)||(14783739-14783818)
chr3 (87-166)||(2439774-2439853)
chr3 (87-166)||(31724357-31724436)
chr3 (87-151)||(14784027-14784092)
[»] chr6 (11 HSPs)
chr6 (87-165)||(20582640-20582718)
chr6 (87-166)||(11242296-11242375)
chr6 (87-165)||(16368893-16368971)
chr6 (87-162)||(6851253-6851328)
chr6 (87-166)||(16766293-16766372)
chr6 (87-162)||(16766556-16766631)
chr6 (87-165)||(33746716-33746794)
chr6 (87-159)||(29846978-29847050)
chr6 (108-166)||(20582900-20582958)
chr6 (87-166)||(11246343-11246422)
chr6 (87-148)||(33746961-33747022)
[»] scaffold0291 (2 HSPs)
scaffold0291 (87-164)||(11349-11426)
scaffold0291 (87-164)||(10958-11035)
[»] scaffold0032 (2 HSPs)
scaffold0032 (87-166)||(33208-33287)
scaffold0032 (122-166)||(32959-33003)
[»] chr5 (5 HSPs)
chr5 (87-166)||(31156185-31156264)
chr5 (87-166)||(39760428-39760507)
chr5 (87-166)||(31155634-31155713)
chr5 (87-165)||(39761607-39761685)
chr5 (98-164)||(31155908-31155974)
[»] chr2 (5 HSPs)
chr2 (87-166)||(4731975-4732054)
chr2 (87-166)||(12414129-12414208)
chr2 (87-166)||(12426189-12426268)
chr2 (87-162)||(4731719-4731794)
chr2 (16-77)||(39487756-39487817)
[»] chr1 (9 HSPs)
chr1 (87-166)||(52331411-52331490)
chr1 (87-164)||(7709996-7710073)
chr1 (87-166)||(7709704-7709783)
chr1 (87-166)||(52331699-52331778)
chr1 (87-165)||(13618577-13618655)
chr1 (87-162)||(34492525-34492600)
chr1 (87-165)||(13618394-13618472)
chr1 (109-164)||(37646951-37647006)
chr1 (87-148)||(34492241-34492302)
[»] chr7 (9 HSPs)
chr7 (87-165)||(37873421-37873499)
chr7 (87-166)||(24825852-24825931)
chr7 (87-165)||(32793076-32793154)
chr7 (87-163)||(24825563-24825639)
chr7 (87-166)||(32792787-32792866)
chr7 (87-165)||(37879143-37879221)
chr7 (87-160)||(11324346-11324419)
chr7 (87-150)||(9402564-9402627)
chr7 (87-149)||(11324057-11324119)
[»] scaffold0428 (2 HSPs)
scaffold0428 (87-166)||(7767-7846)
scaffold0428 (87-166)||(7494-7573)
[»] scaffold1408 (1 HSPs)
scaffold1408 (87-166)||(1748-1827)
[»] scaffold0184 (2 HSPs)
scaffold0184 (87-166)||(7022-7101)
scaffold0184 (99-166)||(7245-7312)


Alignment Details
Target: chr8 (Bit Score: 68; Significance: 1e-30; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 87 - 166
Target Start/End: Original strand, 3068778 - 3068857
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 166  Q
    ||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3068778 taaatattgcactcgtccctgcaaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 3068857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 87 - 166
Target Start/End: Complemental strand, 3069145 - 3069066
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 166  Q
    ||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3069145 taaatattgcactcgtccctgcaaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 3069066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 87 - 166
Target Start/End: Original strand, 3305623 - 3305702
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 166  Q
    ||||||| | ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3305623 taaatattgaactcgtccctgcaaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 3305702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 87 - 166
Target Start/End: Complemental strand, 3305990 - 3305911
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 166  Q
    ||||||| ||||||||||||  |||||||| |||||||||||||  ||||||||||||||||||| ||||||||||||||    
T  3305990 taaatattgcactcgtccctgcaaatatggcccgtttaagttttcttccttgtaaaataaaaatttagaaatcagtcccc 3305911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 1e-30; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 87 - 166
Target Start/End: Complemental strand, 23254748 - 23254669
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 166  Q
    ||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23254748 taaatattgcactcgtccctgcaaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 23254669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 87 - 166
Target Start/End: Original strand, 15874232 - 15874311
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 166  Q
    ||||||| ||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  15874232 taaatattgcactcgtccctgcaaatatggcccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 15874311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 87 - 166
Target Start/End: Original strand, 41315903 - 41315982
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 166  Q
    ||||||| ||| ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41315903 taaatattgcattcgtccctgcaaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 41315982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 38484465 - 38484541
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtc 163  Q
    ||||||| ||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  38484465 taaatattgcactcgtctctgtaaatatggcccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtc 38484541  T

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Target: chr4; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 87 - 166
Target Start/End: Original strand, 23254381 - 23254460
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 166  Q
    ||||||| ||||||||||||  |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  23254381 taaatattgcactcgtccctgcaaatatgacccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 23254460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 87 - 166
Target Start/End: Original strand, 42305909 - 42305988
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 166  Q
    ||||||| ||||||||||||  |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  42305909 taaatattgcactcgtccctgcaaatatggtccgtttaagttttcgtcctcgtaaaataaaaattcagaaatcagtcccc 42305988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 87 - 166
Target Start/End: Complemental strand, 42306275 - 42306196
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 166  Q
    ||||||| | ||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  42306275 taaatattgaactcgtccctccaaatatggcccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 42306196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 87 - 163
Target Start/End: Complemental strand, 55893542 - 55893466
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtc 163  Q
    ||||||| |||||||||||| |||||||||  |||||||||||||||||||| ||||||||||||||||||||||||    
T  55893542 taaatattgcactcgtccctgtaaatatggctcgtttaagttttggtccttgaaaaataaaaattcagaaatcagtc 55893466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 96 - 166
Target Start/End: Original strand, 20878706 - 20878776
Alignment:
Q  96 cactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 166  Q
    ||||| |||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  20878706 cactcatccctgcaaatatggcccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 20878776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 165
Target Start/End: Complemental strand, 41316269 - 41316192
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtccc 165  Q
    ||||||| ||||||||||||  ||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||    
T  41316269 taaatattgcactcgtccctgcaaatatggttcgtttaagttttggtccttgtaaaat-aaaattcagaaatccgtccc 41316192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 95 - 164
Target Start/End: Complemental strand, 15874591 - 15874522
Alignment:
Q  95 gcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcc 164  Q
    ||||||||||||  |||||||  ||||||||||||||||| |||||||||||||||||||||||||||||    
T  15874591 gcactcgtccctgcaaatatgccccgtttaagttttggtctttgtaaaataaaaattcagaaatcagtcc 15874522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 87 - 158
Target Start/End: Original strand, 55893218 - 55893289
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaat 158  Q
    ||||||| |||| |||| ||  |||||||| ||||||||||||||||  |||||||||||||||||||||||    
T  55893218 taaatattgcacccgtctctgcaaatatggcccgtttaagttttggttattgtaaaataaaaattcagaaat 55893289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 151
Target Start/End: Complemental strand, 38485239 - 38485175
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaatt 151  Q
    ||||||| ||||||||||||  |||||||  ||||||||||||| |||| ||||||| |||||||    
T  38485239 taaatattgcactcgtccctgcaaatatgacccgtttaagttttcgtccctgtaaaaaaaaaatt 38485175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 1e-30; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 87 - 166
Target Start/End: Original strand, 20124659 - 20124738
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 166  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  20124659 taaatattgcactcgtccctgtaaatatggtccgtttaagttttggtctttgtaaaataaaaattcagaaatcagtcccc 20124738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 87 - 166
Target Start/End: Original strand, 33794438 - 33794517
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 166  Q
    ||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33794438 taaatattgcactcgtccctgcaaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 33794517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 87 - 166
Target Start/End: Complemental strand, 40560830 - 40560751
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 166  Q
    ||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40560830 taaatattgcactcgtccctgcaaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 40560751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 87 - 166
Target Start/End: Original strand, 5048008 - 5048087
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 166  Q
    ||||||| |||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  5048008 taaatattgcactcgtccttgtaaatatggtccgtttaagttttggttcttgtaaaataaaaattcagaaatcagtcccc 5048087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 95 - 166
Target Start/End: Complemental strand, 2440133 - 2440062
Alignment:
Q  95 gcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 166  Q
    |||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  2440133 gcactcgtccttgtaaatatggtccgtttaagttttggttcttgtaaaataaaaattcagaaatcagtcccc 2440062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 87 - 166
Target Start/End: Complemental strand, 5048375 - 5048296
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 166  Q
    ||||||| ||||||||||||  |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  5048375 taaatattgcactcgtccctgcaaatatggcccgtttaagttttggtcctcgtaaaataaaaattcagaaatcagtcccc 5048296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 87 - 166
Target Start/End: Original strand, 14783739 - 14783818
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 166  Q
    ||||||| ||||| ||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  14783739 taaatattgcacttgtccctgcaaatatggcccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 14783818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 87 - 166
Target Start/End: Original strand, 2439774 - 2439853
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 166  Q
    ||||||| ||||||||||||  |||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  2439774 taaatattgcactcgtccctgcaaatatggcccgtttaagttttggtcctcgtaaaataaaaattcagaaatcaatcccc 2439853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 87 - 166
Target Start/End: Original strand, 31724357 - 31724436
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 166  Q
    ||||||| |||||||||| |  |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  31724357 taaatattgcactcgtccatgcaaatatggcccgtttaaattttggtccttgtaaaataaaaattcagaaatcagtcccc 31724436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 151
Target Start/End: Complemental strand, 14784092 - 14784027
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgt-aaaataaaaatt 151  Q
    ||||||| ||||||||||||  |||||||  ||||||||||||| |||| ||| ||||||||||||    
T  14784092 taaatattgcactcgtccctgcaaatatgacccgtttaagttttcgtccctgtaaaaataaaaatt 14784027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 6e-30; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 87 - 165
Target Start/End: Original strand, 20582640 - 20582718
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtccc 165  Q
    ||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20582640 taaatattgcactcgtccctacaaatatagtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtccc 20582718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 87 - 166
Target Start/End: Original strand, 11242296 - 11242375
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 166  Q
    ||||||| ||||||||||| ||||||||||  | ||||||||||| ||||||||||||||||||||||||||||||||||    
T  11242296 taaatattgcactcgtccccataaatatggctcatttaagttttgatccttgtaaaataaaaattcagaaatcagtcccc 11242375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 87 - 165
Target Start/End: Complemental strand, 16368971 - 16368893
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtccc 165  Q
    ||||||| ||||||||||||  ||||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  16368971 taaatattgcactcgtccctgcaaatatgatccgtttaagttttggtccgtgtaaaatgaaaattcagaaatcagtccc 16368893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 87 - 162
Target Start/End: Original strand, 6851253 - 6851328
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagt 162  Q
    ||||||| |||||||||| |  ||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  6851253 taaatattgcactcgtccatgcaaatatgatccgtttaagttttggtctttgtaaaataaaaattcagaaatcagt 6851328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 87 - 166
Target Start/End: Original strand, 16766293 - 16766372
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 166  Q
    ||||||| ||||||||||||  |||||||  || |||||||||||||| |||||||||||||||||||||||||||||||    
T  16766293 taaatattgcactcgtccctgcaaatatgacccatttaagttttggtctttgtaaaataaaaattcagaaatcagtcccc 16766372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 87 - 162
Target Start/End: Complemental strand, 16766631 - 16766556
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagt 162  Q
    ||||||| ||| ||||||||  |||||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  16766631 taaatattgcaatcgtccctgcaaatatggcccgtttatgttttggtccttgtaaaataaaaattcagaaatcagt 16766556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 165
Target Start/End: Original strand, 33746716 - 33746794
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtccc 165  Q
    ||||||| ||||||||||||  |||||||| ||||||||||||| |||| |||||||||||||||||||||||| ||||    
T  33746716 taaatattgcactcgtccctgcaaatatggcccgtttaagttttcgtccatgtaaaataaaaattcagaaatcaatccc 33746794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 87 - 159
Target Start/End: Complemental strand, 29847050 - 29846978
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatc 159  Q
    ||||||| ||||||||||||  |||||||| |||||||||||||||||  |||||||||||||||||||||||    
T  29847050 taaatattgcactcgtccctgcaaatatggcccgtttaagttttggtctctgtaaaataaaaattcagaaatc 29846978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 108 - 166
Target Start/End: Complemental strand, 20582958 - 20582900
Alignment:
Q  108 taaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 166  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  20582958 taaatatggcccgtttaagttttggtccttgtaaaataaaaatttagaaatcagacccc 20582900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 87 - 166
Target Start/End: Complemental strand, 11246422 - 11246343
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 166  Q
    ||||||| |||||| |||||  ||||||| || ||||||||||  |||||||||||||||||||||| ||||||||||||    
T  11246422 taaatattgcactcatccctgcaaatatgatctgtttaagtttgagtccttgtaaaataaaaattcacaaatcagtcccc 11246343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 148
Target Start/End: Complemental strand, 33747022 - 33746961
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaa 148  Q
    ||||||| |||| |||||||  |||||||| ||||||||||||| |||||||||||| ||||    
T  33747022 taaatattgcacccgtccctgcaaatatggcccgtttaagttttcgtccttgtaaaaaaaaa 33746961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 66; Significance: 2e-29; HSPs: 2)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 87 - 164
Target Start/End: Complemental strand, 11426 - 11349
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcc 164  Q
    ||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  11426 taaatattgcactcgtccctgtaaatatggcccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcc 11349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 87 - 164
Target Start/End: Original strand, 10958 - 11035
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcc 164  Q
    ||||||| ||||||||||||  |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  10958 taaatattgcactcgtccctgcaaatatggcccgtttaaattttggtccttgtaaaataaaaattcagaaatcagtcc 11035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 64; Significance: 4e-28; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 87 - 166
Target Start/End: Complemental strand, 33287 - 33208
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 166  Q
    ||||||| ||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  33287 taaatattgcactcgtccctgcaaatatggtccgtttatgttttggtccttgtaaaataaaaattcagaaatcagtcccc 33208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 32959 - 33003
Alignment:
Q  122 ttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  32959 ttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 33003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 4e-28; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 87 - 166
Target Start/End: Complemental strand, 31156264 - 31156185
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 166  Q
    ||||||| ||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  31156264 taaatattgcattcgtccctacaaatatggtccgtttaagttttggttcttgtaaaataaaaattcagaaatcagtcccc 31156185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 87 - 166
Target Start/End: Original strand, 39760428 - 39760507
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 166  Q
    ||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  39760428 taaatattgcactcgtccctgcaaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaattagtcccc 39760507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 87 - 166
Target Start/End: Complemental strand, 31155713 - 31155634
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 166  Q
    ||||||| ||||||||||||  |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  31155713 taaatattgcactcgtccctgcaaatatgacccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 31155634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 87 - 165
Target Start/End: Complemental strand, 39761685 - 39761607
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtccc 165  Q
    ||||||| ||||| ||||||  ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  39761685 taaatattgcacttgtccctgcaaatatggcacgtttaagttttggtccttgtaaaataaaaattcagaaatcagtccc 39761607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 98 - 164
Target Start/End: Original strand, 31155908 - 31155974
Alignment:
Q  98 ctcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcc 164  Q
    |||||||||  |||||||   ||||||||||||||||||||||||||||||||||||||||||||||    
T  31155908 ctcgtccctgcaaatatgacacgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcc 31155974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 4e-28; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 87 - 166
Target Start/End: Complemental strand, 4732054 - 4731975
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 166  Q
    ||||||| |||||| |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4732054 taaatattgcactcatccctgcaaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 4731975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 87 - 166
Target Start/End: Complemental strand, 12414208 - 12414129
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 166  Q
    ||||||| ||||||||||||  ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  12414208 taaatattgcactcgtccctgcaaatatggtccgtttaagttttcatccttgtaaaataaaaattcagaaatcagtcccc 12414129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 87 - 166
Target Start/End: Complemental strand, 12426268 - 12426189
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 166  Q
    ||||||| ||||||||||||  ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  12426268 taaatattgcactcgtccctgcaaatatggtccgtttaagttttcatccttgtaaaataaaaattcagaaatcagtcccc 12426189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 87 - 162
Target Start/End: Original strand, 4731719 - 4731794
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagt 162  Q
    ||||||| ||||||||||||  |||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  4731719 taaatattgcactcgtccctgcaaatatggcccgtttaagatttggtccttgtaaaataaaaattcagaaatcagt 4731794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 39487817 - 39487756
Alignment:
Q  16 aagaagcattctcagagccgatagaaggagcttgaagcacaagaaaaacaacatgaagaaca 77  Q
    |||||||||||| |||||||| |||||||||| |||||||||||||| ||||||||||||||    
T  39487817 aagaagcattctgagagccgacagaaggagctcgaagcacaagaaaagcaacatgaagaaca 39487756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 4e-28; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 87 - 166
Target Start/End: Original strand, 52331411 - 52331490
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 166  Q
    ||||||| ||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  52331411 taaatattgcactcgtccctgcaaatatggcccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 52331490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 87 - 164
Target Start/End: Complemental strand, 7710073 - 7709996
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcc 164  Q
    ||||||| ||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  7710073 taaatattgcactcgtccctgcaaatatggtccgtttaagttttcgtccttgtaaaataaaaattcagaaatcagtcc 7709996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 87 - 166
Target Start/End: Original strand, 7709704 - 7709783
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 166  Q
    ||||||| | ||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  7709704 taaatattgaactcgtccctgcaaatatggcccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 7709783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 87 - 166
Target Start/End: Complemental strand, 52331778 - 52331699
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 166  Q
    ||||||| ||||||||||||  |||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  52331778 taaatattgcactcgtccctgcaaatatggcccgtttaagttttgatccttgtaaaataaaaatttagaaatcagtcccc 52331699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 87 - 165
Target Start/End: Complemental strand, 13618655 - 13618577
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtccc 165  Q
    ||||||| ||| ||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||    
T  13618655 taaatattgcattcgtccctgcaaatatggtccgtttaagttttggtccttgtaaaataaaaaatcagaaatcaatccc 13618577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 87 - 162
Target Start/End: Complemental strand, 34492600 - 34492525
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagt 162  Q
    ||||||| |||||||| |||  |||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  34492600 taaatattgcactcgttcctgcaaatatggtctgtttaagttttggtccttgtaaaataaaaattcagacatcagt 34492525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 165
Target Start/End: Complemental strand, 13618472 - 13618394
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtccc 165  Q
    ||||||| ||| ||||||||  |||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||    
T  13618472 taaatattgcattcgtccctgcaaatatggcccgtttaagttttggtccttgtaaaataaaaaatcagaaatcaatccc 13618394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 109 - 164
Target Start/End: Complemental strand, 37647006 - 37646951
Alignment:
Q  109 aaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcc 164  Q
    ||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||    
T  37647006 aaatatggctcgtttaagttttggtccttgtaaaataaaaattcaaaaatcagtcc 37646951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 148
Target Start/End: Original strand, 34492241 - 34492302
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaa 148  Q
    ||||||| ||||||||||||  |||||||| ||||||||||||| |||| ||||||| ||||    
T  34492241 taaatattgcactcgtccctgcaaatatggcccgtttaagttttcgtccgtgtaaaaaaaaa 34492302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 1e-27; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 87 - 165
Target Start/End: Original strand, 37873421 - 37873499
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtccc 165  Q
    ||||||| ||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  37873421 taaatattgcactcgtccctgcaaatatggcccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtccc 37873499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 87 - 166
Target Start/End: Complemental strand, 24825931 - 24825852
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 166  Q
    ||||||| ||||||||||||  |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  24825931 taaatattgcactcgtccctgcaaatatggcccgtttaagttttggtccttgaaaaataaaaattcagaaatcagtcccc 24825852  T

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Target: chr7; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 87 - 165
Target Start/End: Complemental strand, 32793154 - 32793076
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtccc 165  Q
    ||||||| ||||||||||||  |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  32793154 taaatattgcactcgtccctgcaaatatagcccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtccc 32793076  T

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Target: chr7; HSP #4
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 87 - 163
Target Start/End: Original strand, 24825563 - 24825639
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtc 163  Q
    ||||||| ||||||||||||  ||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  24825563 taaatattgcactcgtccctgcaaatatggctcgtttaagttttggtccttgtaaaataaaaattcagaaatcagtc 24825639  T

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Target: chr7; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 87 - 166
Target Start/End: Original strand, 32792787 - 32792866
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 166  Q
    ||||||| |||||||||| |  |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  32792787 taaatattgcactcgtccttgcaaatatggcccgtttaagttttggtccttgtaaaataaaaattcagaaatcaatcccc 32792866  T

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Target: chr7; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 165
Target Start/End: Complemental strand, 37879221 - 37879143
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtccc 165  Q
    ||||||| | ||||||||||  |||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  37879221 taaatattgtactcgtccctgcaaatatgacccgtttaagttttggtccttgtaaaataaaaattcagaaatcaatccc 37879143  T

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Target: chr7; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 87 - 160
Target Start/End: Complemental strand, 11324419 - 11324346
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatca 160  Q
    ||||||| ||| ||||||||  ||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  11324419 taaatattgcattcgtccctgcaaatatggctcgtttaagttttggtccttgtaaaataaaaattcagaaatca 11324346  T

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Target: chr7; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 87 - 150
Target Start/End: Original strand, 9402564 - 9402627
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaat 150  Q
    ||||||| ||||||||||||  |||||||  |||||||||||||||||||||||||||||||||    
T  9402564 taaatattgcactcgtccctgcaaatatgacccgtttaagttttggtccttgtaaaataaaaat 9402627  T

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Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 149
Target Start/End: Original strand, 11324057 - 11324119
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaa 149  Q
    ||||||| ||||||||||||  |||||||| ||| ||||||||| |||| ||||||| |||||    
T  11324057 taaatattgcactcgtccctgcaaatatggcccgattaagttttcgtccctgtaaaaaaaaaa 11324119  T

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Target: scaffold0428 (Bit Score: 60; Significance: 9e-26; HSPs: 2)
Name: scaffold0428
Description:

Target: scaffold0428; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 87 - 166
Target Start/End: Complemental strand, 7846 - 7767
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 166  Q
    ||||||| ||||||||||||  ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7846 taaatattgcactcgtccctgcaaatatggcacgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 7767  T

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Target: scaffold0428; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 87 - 166
Target Start/End: Original strand, 7494 - 7573
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 166  Q
    ||||||| ||||||||||||  |||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||    
T  7494 taaatattgcactcgtccctgcaaatatggcccgtttaagttttggtccttctaaaataaaaattcagaaatcaatcccc 7573  T

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Target: scaffold1408 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold1408
Description:

Target: scaffold1408; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 87 - 166
Target Start/End: Original strand, 1748 - 1827
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 166  Q
    ||||||| ||||||||||||  |||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||    
T  1748 taaatattgcactcgtccctgcaaatatggcccgtttaagttttggtccttctaaaataaaaattcagaaatcaatcccc 1827  T

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Target: scaffold0184 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 87 - 166
Target Start/End: Original strand, 7022 - 7101
Alignment:
Q  87 taaatatggcactcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 166  Q
    ||||||| |||||||| |||  ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  7022 taaatattgcactcgttcctgcaaatatggtccgtttaagttttggtccttataaaataaaaattcagaaatcaatcccc 7101  T

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Target: scaffold0184; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 7312 - 7245
Alignment:
Q  99 tcgtccctataaatatggtccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 166  Q
    ||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  7312 tcgtccctgcaaatatggcccgtttaagttttggtccttgtaaaataaaaattcagaaatcagtcccc 7245  T

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