View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10154_low_17 (Length: 251)
Name: NF10154_low_17
Description: NF10154
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10154_low_17 |
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Alignment Details
Target: chr5 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 5 - 227
Target Start/End: Complemental strand, 36285433 - 36285210
Alignment:
| Q |
5 |
aaactaaaaccagcaaaaaacttcgagatgatacaatgctgcagactagcacagagaacataattatgcctgcaattaagaatgcaacaatcatattgga |
104 |
Q |
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| T |
36285433 |
aaactaaaaccaacaaaaaacttcgagatgatacaatgctgcagactagcacagagaacataattatgcctgcaattaagaatgcaacaatcatattgga |
36285334 |
T |
|
| Q |
105 |
tcattacctaatagatactgaatcaatcatttaacttaacaatcgattaacgaaaccatttaatcgactaacacactcaagggtattccctaattt-gaa |
203 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
36285333 |
tcattacctaatagatactgaatcaatcatttaacttaacaatcgattaacgaaaccatttaatcgactaacacactcaagggtattccctaatttggaa |
36285234 |
T |
|
| Q |
204 |
aatcaccctaataaatcaacctta |
227 |
Q |
| |
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|||||||||||||||||||||||| |
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| T |
36285233 |
aatcaccctaataaatcaacctta |
36285210 |
T |
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