View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10155_low_9 (Length: 252)
Name: NF10155_low_9
Description: NF10155
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10155_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 23 - 237
Target Start/End: Complemental strand, 7876643 - 7876429
Alignment:
| Q |
23 |
caaagacgaacccaataacgacggcaccagcagcaataaagaacagaccgagtcgtcgccaacgccgttgccgtcatcaccaacgccggcaccggtaggg |
122 |
Q |
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| T |
7876643 |
caaagacgaacccaacaacgacggcaccagcagcaataaagaacagaccgactcgtcgccaacgccgttgccgtcatcaccaacgccggcaccggcaggg |
7876544 |
T |
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| Q |
123 |
cgacgactcagtgtacaagacagaatcaatttgtttgaaaagaagcaaaaagaaaatactggaaagccggtcgagcttcggagaatgtcctctgacgtat |
222 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7876543 |
cgacgactcagtgtacaagacagaatcaatttgtttgaaaagaagcaaaaagaaaatactggaaagccggtcgagcttcggagaatgtcctctgacgtat |
7876444 |
T |
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| Q |
223 |
tccggcggtggagtg |
237 |
Q |
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| T |
7876443 |
tccggcggtggagtg |
7876429 |
T |
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