View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10156_high_18 (Length: 261)
Name: NF10156_high_18
Description: NF10156
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF10156_high_18 |
 |  |
|
[»] scaffold0070 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr5 (Bit Score: 163; Significance: 4e-87; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 14275952 - 14276211
Alignment:
Q |
1 |
aaacaacgagcctcaaccaattatgagcactcaacgaagaaacgataagccccaaccaattatgggcactcaagacttcgaatcccaaccaattataggc |
100 |
Q |
|
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
T |
14275952 |
aaacaacgagcctcaaccaattatgagcactcaaccaagaaacgataagccccaaccaattatgggcactcaagacttcaggtcccaaccaattataggc |
14276051 |
T |
 |
Q |
101 |
accacacgacaataaatgtatgcatgcgacacataattattaactccacaaaatagatcgctcacaatgagtatccg----accaaattaatcattgtct |
196 |
Q |
|
|
||||| ||||||| |||||||||||||||||||| ||||||||||||| |||||||||| | ||||||||||||||| ||||||||||||||||||| |
|
|
T |
14276052 |
accacgcgacaatgaatgtatgcatgcgacacatgattattaactccaaaaaatagatcacacacaatgagtatccgaccaaccaaattaatcattgtct |
14276151 |
T |
 |
Q |
197 |
taagcacctgctagagacacaaattaca-cctcaataactttgcctaacaaatatgcaag |
255 |
Q |
|
|
||| ||||||| ||||||||| |||||| | |||||||| || || ||||||||||||| |
|
|
T |
14276152 |
taaccacctgccagagacacagattacatcgacaataactctgacttacaaatatgcaag |
14276211 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 6 - 215
Target Start/End: Original strand, 37627055 - 37627262
Alignment:
Q |
6 |
acgagcctcaaccaattatgagcactcaacgaagaaacgataagccccaaccaattatgggcactcaagacttcgaatcccaaccaattataggcaccac |
105 |
Q |
|
|
||||||||||||||||||||||||||||| | ||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||| |
|
|
T |
37627055 |
acgagcctcaaccaattatgagcactcaaa-aggaaacaataagcctcaaccaattatgggcactcaagacttcggatcccaaccaattatgggcaccaa |
37627153 |
T |
 |
Q |
106 |
acgacaataaatgtatgcatgcgacacataattattaactccacaaaatagatcgctcacaatgagtatccgaccaaattaatcattgtcttaagcacct |
205 |
Q |
|
|
||||||| |||||||||||||||||| | |||||||||||| ||||||| | |||||||||||||| |||| ||||||||||||||||||| ||||| |
|
|
T |
37627154 |
gcgacaatgaatgtatgcatgcgacacctgcatattaactccac-aaatagaccactcacaatgagtatgcgactaaattaatcattgtcttaaccacct |
37627252 |
T |
 |
Q |
206 |
gctagagaca |
215 |
Q |
|
|
|||||||||| |
|
|
T |
37627253 |
gctagagaca |
37627262 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 49 - 132
Target Start/End: Original strand, 37803601 - 37803684
Alignment:
Q |
49 |
gccccaaccaattatgggcactcaagacttcgaatcccaaccaattataggcaccacacgacaataaatgtatgcatgcgacac |
132 |
Q |
|
|
|||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||||||||||| |
|
|
T |
37803601 |
gccccaaccaattatgggcactcaagacttcgggtcccaaccaattatgggcaccacacgacaatgaatgtatgcatgcgacac |
37803684 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 142 - 215
Target Start/End: Original strand, 37806299 - 37806372
Alignment:
Q |
142 |
aactccacaaaatagatcgctcacaatgagtatccgaccaaattaatcattgtcttaagcacctgctagagaca |
215 |
Q |
|
|
|||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |
|
|
T |
37806299 |
aactccacaaaatagaccactcacaatgagtatccgactaaattaatcattgtcttaaccacctgctagagaca |
37806372 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 144; Significance: 8e-76; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 4 - 226
Target Start/End: Original strand, 11991774 - 11991997
Alignment:
Q |
4 |
caacgagcctcaaccaattatgagcactcaacgaagaaacgataagccccaaccaattatgggcactcaagacttcgaatcccaaccaattataggcacc |
103 |
Q |
|
|
|||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||| |||||| |
|
|
T |
11991774 |
caacgagcctcaaccaattatgagcactcaaccaagaaacgataagcctcaaccaattatgggcactcaagactttgggtcccaaccaattatgggcacc |
11991873 |
T |
 |
Q |
104 |
acacgacaataaatgtatgcatgcgacacataattattaactccacaaaatagatcgctcacaatgagtatccgaccaaattaatcattgtctt-aagca |
202 |
Q |
|
|
| ||||||| |||| |||| |||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| || || |
|
|
T |
11991874 |
atgcgacaatgaatgcatgcttgcgacacatggttattaactccacaaaatagatcactcacaatgagtattcgaccaaattaatcattgtcttaaacca |
11991973 |
T |
 |
Q |
203 |
cctgctagagacacaaattacacc |
226 |
Q |
|
|
|||||||||||||| |||||||| |
|
|
T |
11991974 |
cctgctagagacacggattacacc |
11991997 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 141; Significance: 5e-74; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 3 - 215
Target Start/End: Original strand, 41313595 - 41313806
Alignment:
Q |
3 |
acaacgagcctcaaccaattatgagcactcaacgaagaaacgataagccccaaccaattatgggcactcaagacttcgaatcccaaccaattataggcac |
102 |
Q |
|
|
|||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |
|
|
T |
41313595 |
acaacgagcctcaaccaattatgagcactcaaa-aggaaacaataagccccaaccaattatgggcactcaagacttcgggtcccaaccaattatgagcac |
41313693 |
T |
 |
Q |
103 |
cacacgacaataaatgtatgcatgcgacacataattattaactccacaaaatagatcgctcacaatgagtatccgaccaaattaatcattgtcttaagca |
202 |
Q |
|
|
||| ||||||| |||||||||||||||||| | ||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||| || |
|
|
T |
41313694 |
cacgcgacaatgaatgtatgcatgcgacacctgcttattaactccacaaaatagaccactcacaatgagtatccgactaaattaatcattgtcttaacca |
41313793 |
T |
 |
Q |
203 |
cctgctagagaca |
215 |
Q |
|
|
||||||||||||| |
|
|
T |
41313794 |
cctgctagagaca |
41313806 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 137; Significance: 1e-71; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 3 - 215
Target Start/End: Complemental strand, 2188340 - 2188129
Alignment:
Q |
3 |
acaacgagcctcaaccaattatgagcactcaacgaagaaacgataagccccaaccaattatgggcactcaagacttcgaatcccaaccaattataggcac |
102 |
Q |
|
|
|||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |
|
|
T |
2188340 |
acaacgagcctcaaccaattatgagcactcaaa-aggaaacaataagccccaaccaattatgggcactcaagacttcgggtcccaaccaattatgagcac |
2188242 |
T |
 |
Q |
103 |
cacacgacaataaatgtatgcatgcgacacataattattaactccacaaaatagatcgctcacaatgagtatccgaccaaattaatcattgtcttaagca |
202 |
Q |
|
|
||| ||||||| |||||||||||||||||| | ||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||| || |
|
|
T |
2188241 |
cacgcgacaatgaatgtatgcatgcgacacctgcttattaactccacaaaatagaccactcacaatgagtatccgacttaattaatcattgtcttaacca |
2188142 |
T |
 |
Q |
203 |
cctgctagagaca |
215 |
Q |
|
|
||||||||||||| |
|
|
T |
2188141 |
cctgctagagaca |
2188129 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 3 - 261
Target Start/End: Original strand, 19632565 - 19632823
Alignment:
Q |
3 |
acaacgagcctcaaccaattatgagcactcaacgaagaaacgataagccccaaccaattatgggcactcaagacttcgaatcccaaccaattataggcac |
102 |
Q |
|
|
||||| |||||||||||||||||||||||||| | ||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||| |||| |
|
|
T |
19632565 |
acaacaagcctcaaccaattatgagcactcaaa-aggaaacaataagccccaaccaattatgg-cactcaagacttcgggtcccaaccaattatgagcac |
19632662 |
T |
 |
Q |
103 |
cacacgacaataaatgtatgcatgcgacacataattattaactccacaaaatagatcgctcacaatgagtatccgaccaaattaatcattgtcttaagca |
202 |
Q |
|
|
||| ||||| | |||||||||||||||||| | ||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||| || |
|
|
T |
19632663 |
cacgcgacactgaatgtatgcatgcgacacctgcttattaactccacaaaatagaccactcacaatgagtatccgactaaattaatcattgtcttaacca |
19632762 |
T |
 |
Q |
203 |
cctgctagagacacaaattacacc-tcaataactttgcctaac-aaatatgcaagacctca |
261 |
Q |
|
|
||||||||||||| |||||||| || |||| ||| ||||| ||||||||||||||||| |
|
|
T |
19632763 |
cctgctagagacattgattacaccgacagtaacgttgactaacaaaatatgcaagacctca |
19632823 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 8 - 215
Target Start/End: Original strand, 1608479 - 1608685
Alignment:
Q |
8 |
gagcctcaaccaattatgagcactcaacgaagaaacgataagccccaaccaattatgggcactcaagacttcgaatcccaaccaattataggcaccacac |
107 |
Q |
|
|
||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||| | |
|
|
T |
1608479 |
gagcctcaaccaattatgagcactcaaa-aggaaacaataagccccaaccaattatgggcactcaagacttagggtcccaaccaattatgggcaccacgc |
1608577 |
T |
 |
Q |
108 |
gacaataaatgtatgcatgcgacacataattattaactccacaaaatagatcgctcacaatgagtatccgaccaaattaatcattgtcttaagcacctgc |
207 |
Q |
|
|
||| || |||||||||||||||||| | ||||||||||||||| ||||| | ||||||||||||||||||| ||||||||||||||||||| ||||||| |
|
|
T |
1608578 |
gaccatgaatgtatgcatgcgacacctgcttattaactccacaagatagaccactcacaatgagtatccgactaaattaatcattgtcttaaccacctgc |
1608677 |
T |
 |
Q |
208 |
tagagaca |
215 |
Q |
|
|
|||||||| |
|
|
T |
1608678 |
tagagaca |
1608685 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 128; Significance: 3e-66; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 3 - 226
Target Start/End: Complemental strand, 19215986 - 19215764
Alignment:
Q |
3 |
acaacgagcctcaaccaattatgagcactcaacgaagaaacgataagccccaaccaattatgggcactcaagacttcgaatcccaaccaattataggcac |
102 |
Q |
|
|
||||||||||| |||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |
|
|
T |
19215986 |
acaacgagcctaaaccaattatgagcactcaaa-aggaaacaataagccccaaccaattatgggcactcaagacttcgggtcccaaccaattatgggcac |
19215888 |
T |
 |
Q |
103 |
cacacgacaataaatgtatgcatgcgacacataattattaactccacaaaatagatcgctcacaatgagtatccgaccaaattaatcattgtcttaagca |
202 |
Q |
|
|
|| ||||||| ||||||||||||| |||| | |||||||||||||||||||| | ||||||||||||||||||| |||||||||||| |||||| || |
|
|
T |
19215887 |
catgcgacaatgaatgtatgcatgcaacacctgcttattaactccacaaaataggccactcacaatgagtatccgactaaattaatcattatcttaacca |
19215788 |
T |
 |
Q |
203 |
cctgctagagacacaaattacacc |
226 |
Q |
|
|
|||||||||||||| |||||||| |
|
|
T |
19215787 |
cctgctagagacactgattacacc |
19215764 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 19589732 - 19589508
Alignment:
Q |
1 |
aaacaacgagcctcaaccaattatgagcactcaacgaagaaacgataagccccaaccaattatgggcactcaagacttcgaatcccaaccaattataggc |
100 |
Q |
|
|
|||||||||| ||||||||||||||| ||||||| | |||||| || ||||||||||||| ||||||||||||||| | | |||||||||||| ||| |
|
|
T |
19589732 |
aaacaacgagtctcaaccaattatgaacactcaaaaca-aaacgacaaaccccaaccaattacgggcactcaagacttagggttccaaccaattatgggc |
19589634 |
T |
 |
Q |
101 |
accacacgacaataaatgtatgcatgcgacacataatt-attaactcca-caaaatagatcgctcacaatgagtatccgaccaaattaatcattgtctta |
198 |
Q |
|
|
| |||||||| || ||| |||||||| | |||| || |||||||||| |||||||||| | ||| ||||||||| || |||||||| |||| || |
|
|
T |
19589633 |
agcacacgacgatgaatatatgcatgtaatacatggttaattaactccataaaaatagatcaattacactgagtatccaactaaattaatggttgttcta |
19589534 |
T |
 |
Q |
199 |
agcacctgctagagacacaaattaca |
224 |
Q |
|
|
| |||| ||||||||||| |||||| |
|
|
T |
19589533 |
accaccatctagagacacagattaca |
19589508 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 125; Significance: 2e-64; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 3 - 215
Target Start/End: Complemental strand, 29823112 - 29822902
Alignment:
Q |
3 |
acaacgagcctcaaccaattatgagcactcaacgaagaaacgataagccccaaccaattatgggcactcaagacttcgaatcccaaccaattataggcac |
102 |
Q |
|
|
|||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||| ||||| |
|
|
T |
29823112 |
acaacgagcctcaaccaattatgagcactcaaa-aggaaacaataagccccaaccaattatgggcgctcaagacttcgggtcccaaccaattatgggcac |
29823014 |
T |
 |
Q |
103 |
cacacgacaataaatgtatgcatgcgacacataattattaactccacaaaatagatcgctcacaatgagtatccgaccaaattaatcattgtcttaagca |
202 |
Q |
|
|
||| ||||||| |||||||||||||||||| | ||||| ||||||||||||||| | ||||||||||||||| ||| ||||||||||| ||||||| || |
|
|
T |
29823013 |
cacgcgacaatgaatgtatgcatgcgacacctgcttatt-actccacaaaatagaccactcacaatgagtatctgactaaattaatcatggtcttaacca |
29822915 |
T |
 |
Q |
203 |
cctgctagagaca |
215 |
Q |
|
|
||||||||||||| |
|
|
T |
29822914 |
cctgctagagaca |
29822902 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 4 - 210
Target Start/End: Original strand, 451968 - 452171
Alignment:
Q |
4 |
caacgagcctcaaccaattatgagcactcaacgaagaaacgataagccccaaccaattatgggcactcaagacttcgaatcccaaccaattataggcacc |
103 |
Q |
|
|
||||||| | ||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |
|
|
T |
451968 |
caacgagtcccaaccaattatgagcactcaaa-aggaaacaataagccccaaccaattatgggcactcaagacttcgggtcccaaccaattatgggcacc |
452066 |
T |
 |
Q |
104 |
acacgacaataaatgtatgcatgcgacacataattattaactccacaaaatagatcgctcacaatgagtatccgaccaaattaatcattgtcttaagcac |
203 |
Q |
|
|
|||||||||| |||||||||||| ||||| | |||||||||||||||||| | | ||||| |||||||| ||||| ||||||||||| |||||| ||| |
|
|
T |
452067 |
acacgacaatgaatgtatgcatgtgacacctgattattaactccacaaaaaacaccgctcttaatgagtaaccgactaaattaatcat--tcttaaccac |
452164 |
T |
 |
Q |
204 |
ctgctag |
210 |
Q |
|
|
||||||| |
|
|
T |
452165 |
ctgctag |
452171 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 4 - 178
Target Start/End: Original strand, 7093803 - 7093976
Alignment:
Q |
4 |
caacgagcctcaaccaattatgagcactcaacgaagaaacgataagccccaaccaattatgggcactcaagacttcgaatcccaaccaattataggcacc |
103 |
Q |
|
|
|||||||||||||||||||||||||||||| | | ||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||| |
|
|
T |
7093803 |
caacgagcctcaaccaattatgagcactca-caaggaaacaataagccccaaccaattatgggcactcaagacttcgggtcctaaccaattatgggcacc |
7093901 |
T |
 |
Q |
104 |
acacgacaataaatgtatgcatgcgacacataattattaactccacaaaatagatcgctcacaatgagtatccga |
178 |
Q |
|
|
|| | ||||| |||||||||||||||||| | |||||||||||| ||||||| |||||||||| ||||||| |
|
|
T |
7093902 |
acgcaacaatgaatgtatgcatgcgacacctgcatattaactccaccaaatagacaactcacaatgaatatccga |
7093976 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 4 - 178
Target Start/End: Original strand, 7097536 - 7097709
Alignment:
Q |
4 |
caacgagcctcaaccaattatgagcactcaacgaagaaacgataagccccaaccaattatgggcactcaagacttcgaatcccaaccaattataggcacc |
103 |
Q |
|
|
|||||||||||||||||||||||||||||| | | ||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||| |
|
|
T |
7097536 |
caacgagcctcaaccaattatgagcactca-caaggaaacaataagccccaaccaattatgggcactcaagacttcgggtcctaaccaattatgggcacc |
7097634 |
T |
 |
Q |
104 |
acacgacaataaatgtatgcatgcgacacataattattaactccacaaaatagatcgctcacaatgagtatccga |
178 |
Q |
|
|
|| | ||||| |||||||||||||||||| | |||||||||||| ||||||| |||||||||| ||||||| |
|
|
T |
7097635 |
acgcaacaatgaatgtatgcatgcgacacctgcatattaactccaccaaatagacaactcacaatgaatatccga |
7097709 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 4 - 215
Target Start/End: Complemental strand, 8378021 - 8377811
Alignment:
Q |
4 |
caacgagcctcaaccaattatgagcactcaacgaagaaacgataagccccaaccaattatgggcactcaagacttcgaatcccaaccaattataggcacc |
103 |
Q |
|
|
||||| |||||||||||||||||||||||| | | ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |
|
|
T |
8378021 |
caacgggcctcaaccaattatgagcactca-caaggaaacaataagccccaaccaattatgggcactcaagacttcgggtcccaaccaattatgggcacc |
8377923 |
T |
 |
Q |
104 |
acacgacaataaatgtatgcatgcgacacataattattaactccacaaaatagatcgctcacaatgagtatccgaccaaattaatcattgtcttaagcac |
203 |
Q |
|
|
|| | ||||| |||||||||||||||||| | |||||||||||||||||||| |||||||||| |||||||| |||||||||| |||||||| ||| |
|
|
T |
8377922 |
acgcaacaatgaatgtatgcatgcgacacctgcatattaactccacaaaatagacaactcacaatgaatatccgactaaattaatcactgtcttaaccac |
8377823 |
T |
 |
Q |
204 |
ctgctagagaca |
215 |
Q |
|
|
|||||||||||| |
|
|
T |
8377822 |
ctgctagagaca |
8377811 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0070 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0070
Description:
Target: scaffold0070; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 3 - 226
Target Start/End: Original strand, 58612 - 58833
Alignment:
Q |
3 |
acaacgagcctcaaccaattatgagcactcaacgaagaaacgataagccccaaccaattatgggcactcaagacttcgaatcccaaccaattataggcac |
102 |
Q |
|
|
|||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |
|
|
T |
58612 |
acaacgagcctcaaccaattatgagcactcaaaaaggaaacaataagccccaaccaattatgggcactcaagacttcgggtcccaaccaattatgggcac |
58711 |
T |
 |
Q |
103 |
cacacgacaataaatgtatgcatgcgacacataattattaactccacaaaatagatcgctcacaatgagtatccgaccaaattaatcattgtcttaagca |
202 |
Q |
|
|
||| ||||||| ||||||||||||||||| | ||||||| ||||||||| | | | |||| |||||||| ||||| ||||||||||| |||||| || |
|
|
T |
58712 |
cacgcgacaatgaatgtatgcatgcgacagctggttattaattccacaaaaaacacctctcataatgagtaaccgactaaattaatcat--tcttaacca |
58809 |
T |
 |
Q |
203 |
cctgctagagacacaaattacacc |
226 |
Q |
|
|
||||||||||||||| ||| |||| |
|
|
T |
58810 |
cctgctagagacacagattgcacc |
58833 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University