View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10156_high_23 (Length: 227)
Name: NF10156_high_23
Description: NF10156
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10156_high_23 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 2 - 227
Target Start/End: Complemental strand, 29943226 - 29943001
Alignment:
| Q |
2 |
gtatctaaaatttgaactctgacccttacacatattaattactattcgagatgtcatctttttaaataaattttaattactcggatgattaatttatgtg |
101 |
Q |
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| T |
29943226 |
gtatctgaaatttgaactccgatccttacatatattaattacaattcgagatgtcatttttttaaataaattttaattactcgaatgattaatttatatg |
29943127 |
T |
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| Q |
102 |
attgcgcgcgacatatattggtattatttacaacaagaatatgtattattaacaagaatattcttgaagtacaatgtttaaacactaggcaccaaacacg |
201 |
Q |
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| T |
29943126 |
gtagcgcgcgacatatattggtattatttacaacaagaatatgtattattaacaagaatattcttgaagtacaatgtttaaacactaggcaccaaacacg |
29943027 |
T |
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| Q |
202 |
atcatgtttattaacacaaccggacc |
227 |
Q |
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|||||||||||||||||||||||||| |
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| T |
29943026 |
atcatgtttattaacacaaccggacc |
29943001 |
T |
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