View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10157_high_7 (Length: 248)
Name: NF10157_high_7
Description: NF10157
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10157_high_7 |
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Alignment Details
Target: chr3 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 10 - 244
Target Start/End: Original strand, 11535305 - 11535539
Alignment:
| Q |
10 |
atgaacggcctcttttaactgtctctctaacatctactctgttatcggatgaaattcacatggatactacctacactttaataatggattttgtgtaaag |
109 |
Q |
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| T |
11535305 |
atgaacggcctcatttaacggtctctctgacatttactctgttatcggatgaaattcacatggatactacctacactttaataatgaattttgtgtaaag |
11535404 |
T |
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| Q |
110 |
tagtaagacacgcatgagtttctttcattaaaaaagtgagtgttagagaaggtaatagaaagaaaatgttgttagcatttttcgtagagtaaagttagta |
209 |
Q |
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|||||||||| |||||| |||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||| ||||||||||||||||| |
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| T |
11535405 |
tagtaagacatgcatgaatttctttcattaaaaaagtgagtgttagagaaggtattaaaaagaaagtgttgttagcattttttgtagagtaaagttagta |
11535504 |
T |
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| Q |
210 |
acacattagtggcccaatagcatgccaaagatgtt |
244 |
Q |
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|||||| ||||||||||||||||| |||||||||| |
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| T |
11535505 |
acacatcagtggcccaatagcatggcaaagatgtt |
11535539 |
T |
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