View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10159_high_13 (Length: 335)
Name: NF10159_high_13
Description: NF10159
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10159_high_13 |
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Alignment Details
Target: chr1 (Bit Score: 298; Significance: 1e-167; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 15 - 320
Target Start/End: Complemental strand, 40870115 - 40869810
Alignment:
| Q |
15 |
agttaccggactccgacgtcgaaagaaagcaagataccggagatacaggattgtccgccggcgccgagaaaaccgaagccgttcgtttcttgtaagagga |
114 |
Q |
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| T |
40870115 |
agttaccggactccgacgtcgaaagaaagcaagataccggagatacatgattgtccgccggcgccgagaaaaccgaagccgttcgtttcttgtaagagga |
40870016 |
T |
|
| Q |
115 |
agcttatggatgattttcaattttttgaagttaagaataatgaagacatggacgcgtttttcagatccacttttcccaagaggacttgtccttgtacatg |
214 |
Q |
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| T |
40870015 |
agcttatggatgattttcaattttttgaagttaagaataatgaagacatggacgcgtttttcagatccacttttcccaagaggacttgtccttgtacatg |
40869916 |
T |
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| Q |
215 |
aaaattcatcatcattaacctctctgcaattcgaggatcgaacactaccttagtgctccttcataattacgtaaattaattaattacacgatttttgttc |
314 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40869915 |
aaaattcatcatcatcaacctctctgcaattcgaggatcgaacactaccttagtgctccttcataattacgtaaattaattaattacacgatttttgttc |
40869816 |
T |
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| Q |
315 |
ttttct |
320 |
Q |
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|||||| |
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| T |
40869815 |
ttttct |
40869810 |
T |
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