View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10159_low_25 (Length: 304)
Name: NF10159_low_25
Description: NF10159
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10159_low_25 |
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Alignment Details
Target: chr4 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 45519409 - 45519200
Alignment:
| Q |
1 |
caattattcaattgactctatgctagctccttttnnnnnnnnttctattaacctgatctttccatggaagaaactttattacaccattacacttcacatt |
100 |
Q |
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| T |
45519409 |
caattattcaattgactctatgctagctccttttaaaaaaaattctattaacttgatctttccatggaagaaactttattacaccattacacttcacatt |
45519310 |
T |
|
| Q |
101 |
ttattgagaaaatgttgaaaacaaaacttcactttccatgttaacttgtgatcataaaaacttcattcttcaaaacccatcaatggatgaacacatggtc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45519309 |
ttattgagaaaatgttgaaaacaaaacttcactttccatgttaacttgtgatcataaaaacttcattcttcaaaacccatcaatggatgaacacatggtc |
45519210 |
T |
|
| Q |
201 |
aagtccaaaa |
210 |
Q |
| |
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|||||||||| |
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| T |
45519209 |
aagtccaaaa |
45519200 |
T |
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