View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10159_low_31 (Length: 281)
Name: NF10159_low_31
Description: NF10159
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10159_low_31 |
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Alignment Details
Target: chr8 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 265
Target Start/End: Complemental strand, 41301832 - 41301566
Alignment:
| Q |
1 |
tccgttcacatatattttgtcttctgaactacatatacaattgtgtttgaataaatcnnnnnnn--ttatctttaactagataagacgagggaatgcagt |
98 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
41301832 |
tccgttcacatatattttgtcttctgaactacatatacaattgtgtttgaataaataaataaataattatctttaactagataagacgagggaatgcagt |
41301733 |
T |
|
| Q |
99 |
taattctcaacattttctatattgttcgccgtggaagagatttatgactggtttctaagttatagaattatatatactctcacgtcccatttctttatgc |
198 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41301732 |
taattctcaacattttctatattgttcgccgtggaagagatttatgactggtttctaagttatagaattatatatactctcacgtcccatttctttatgc |
41301633 |
T |
|
| Q |
199 |
tcaattaatgtgtatttggttcatgacttaggatgcttaactactatagaattgactcttttaaatg |
265 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41301632 |
gcaattaatgtgtatttggttcatgacttaggatgcttaactactatagaattgactcttttaaatg |
41301566 |
T |
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