View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10159_low_43 (Length: 248)
Name: NF10159_low_43
Description: NF10159
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10159_low_43 |
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Alignment Details
Target: chr4 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 17 - 237
Target Start/End: Complemental strand, 21083445 - 21083225
Alignment:
| Q |
17 |
aaatttcaatatgtagaaagaagtcagttgaaaagtgtgtgttaaagagcgatattgttattattgattctctctacacataatattttagttgtgagag |
116 |
Q |
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| T |
21083445 |
aaatttcaatatgtagaaagaagtcagttgaaaaatgtgtgttaaagagcgatattgttattattgattctctctacacataatattttagttgtgagag |
21083346 |
T |
|
| Q |
117 |
tttgttttatttattttaagggtggttttttgtgatggtcccgcttgcaagtgtaaaaggaagagcggttgaacgtccaaaccctcctatgattggaatg |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21083345 |
tttgttttatttattttaagggtggttttttgtgatggtcccgcttgcaagtgtaaaaggaagagcggttgaacgtccaaaccctcctatgattggaatg |
21083246 |
T |
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| Q |
217 |
tttttgttgtatttgtctgtg |
237 |
Q |
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|||||||||||||||| |||| |
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| T |
21083245 |
tttttgttgtatttgtgtgtg |
21083225 |
T |
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