View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10159_low_58 (Length: 224)
Name: NF10159_low_58
Description: NF10159
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10159_low_58 |
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Alignment Details
Target: chr5 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 12 - 207
Target Start/End: Complemental strand, 39227200 - 39227005
Alignment:
| Q |
12 |
caaagggttttctttatttgcctcaactttcacttcttgaacttcaaaacaatttgcttggtggttttcttccacaacaagaaatcacaaacacaaacac |
111 |
Q |
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| T |
39227200 |
caaagggttttctttatttgcctcaactttcacttcttgaacttcaaaacaatttgcttggtggttttcttccacaacaagaaatcacaaacacaaacac |
39227101 |
T |
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| Q |
112 |
ttctaaacttggagagataaatctttcgaacaaccgtttatccggatcactaccaaattctattggaaactttccaaacttgcagattctgcttct |
207 |
Q |
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| T |
39227100 |
ttctaaacttggagagataaatctttcgaacaaccgtttatccggatcactaccaaattctattggaaactttccaaacttgcagattctgcttct |
39227005 |
T |
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