View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1015_low_8 (Length: 297)
Name: NF1015_low_8
Description: NF1015
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1015_low_8 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 30 - 297
Target Start/End: Original strand, 41933914 - 41934182
Alignment:
| Q |
30 |
actggttcttcccttaactccaaaa-gacaaggtggatgaaacagtgaacatattttctttgatatagtgagaaagcattagaagaggagacacggactg |
128 |
Q |
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| T |
41933914 |
actggttcttcccttaactccaaaaagacaaggtggatgaaacagtgaacatattttctttgatatagtgagaaagcattagaagaggagacacggactg |
41934013 |
T |
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| Q |
129 |
agtatctgatccaacccgaccagagtgtgcagaccaaagcacttgctggtttaaatgttaactatttgtttcccgaggttcagaaaagatcaccatgaga |
228 |
Q |
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| T |
41934014 |
agtatctgatccaacccgaccagagtgtgcagaccaaagcacttgctggtttaaatgttaactatttgtttcccgaggttcagaaaagatcaccatgaga |
41934113 |
T |
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| Q |
229 |
gggtgtcaaacaaacaacacacattgtgtgtgtatttcctcggaatcattcatcaattaaacaatctat |
297 |
Q |
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| T |
41934114 |
gggtgtcaaacaaacaacacacattgtgtgtgtatttcctcggaatcattcatcaattaaacaatctat |
41934182 |
T |
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