View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10160_low_11 (Length: 288)
Name: NF10160_low_11
Description: NF10160
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10160_low_11 |
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Alignment Details
Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 55161036 - 55161091
Alignment:
| Q |
213 |
ttattattaataacagtcacgtgagatttagttacacaaatattgtagcatgtgaag |
269 |
Q |
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| T |
55161036 |
ttattattaataacagtcacgtgagatttggttacac-aatattgtagcatgtgaag |
55161091 |
T |
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