View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10160_low_12 (Length: 286)

Name: NF10160_low_12
Description: NF10160
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10160_low_12
NF10160_low_12
[»] chr5 (47 HSPs)
chr5 (2-271)||(33822257-33822526)
chr5 (165-271)||(42329463-42329569)
chr5 (158-271)||(29653424-29653537)
chr5 (156-269)||(36296042-36296155)
chr5 (165-271)||(27652238-27652344)
chr5 (158-249)||(42103975-42104066)
chr5 (151-249)||(42661845-42661943)
chr5 (187-271)||(793545-793629)
chr5 (157-249)||(2729697-2729789)
chr5 (157-249)||(26660904-26660996)
chr5 (157-249)||(26932497-26932589)
chr5 (158-249)||(39566333-39566424)
chr5 (173-271)||(32962935-32963033)
chr5 (158-271)||(34919863-34919976)
chr5 (161-265)||(4833551-4833655)
chr5 (157-249)||(34972561-34972653)
chr5 (165-249)||(21375569-21375653)
chr5 (157-264)||(15567048-15567155)
chr5 (157-249)||(3305919-3306012)
chr5 (183-267)||(33584912-33584994)
chr5 (158-271)||(36660553-36660666)
chr5 (158-226)||(166561-166629)
chr5 (157-233)||(34445940-34446015)
chr5 (158-249)||(29807226-29807317)
chr5 (155-249)||(14006042-14006136)
chr5 (156-210)||(36783544-36783598)
chr5 (187-249)||(42978014-42978076)
chr5 (165-248)||(14620412-14620496)
chr5 (167-249)||(39730096-39730178)
chr5 (157-226)||(4371523-4371592)
chr5 (150-215)||(7145032-7145097)
chr5 (165-226)||(38982073-38982134)
chr5 (158-222)||(21375481-21375545)
chr5 (158-249)||(8336319-8336410)
chr5 (158-233)||(27600560-27600635)
chr5 (228-271)||(34171291-34171334)
chr5 (156-226)||(41566947-41567017)
chr5 (156-226)||(43257771-43257840)
chr5 (176-231)||(32690692-32690747)
chr5 (156-210)||(12167520-12167574)
chr5 (160-226)||(24436454-24436520)
chr5 (152-222)||(28798220-28798290)
chr5 (158-192)||(29051677-29051711)
chr5 (165-222)||(39059977-39060034)
chr5 (155-195)||(2729948-2729988)
chr5 (231-271)||(29044848-29044888)
chr5 (157-249)||(39504875-39504967)
[»] chr7 (43 HSPs)
chr7 (157-269)||(19906544-19906656)
chr7 (157-271)||(32345745-32345859)
chr7 (158-271)||(6521947-6522060)
chr7 (153-271)||(26963609-26963727)
chr7 (161-271)||(39117403-39117513)
chr7 (158-269)||(19276528-19276638)
chr7 (157-271)||(36446980-36447094)
chr7 (156-249)||(1742141-1742234)
chr7 (158-253)||(27947411-27947506)
chr7 (157-249)||(37815874-37815966)
chr7 (158-262)||(48684860-48684964)
chr7 (157-271)||(10684740-10684854)
chr7 (165-246)||(16564720-16564801)
chr7 (165-246)||(16600861-16600942)
chr7 (157-249)||(29530844-29530936)
chr7 (158-249)||(7795153-7795244)
chr7 (158-249)||(35777969-35778060)
chr7 (157-248)||(45933498-45933589)
chr7 (156-249)||(23935571-23935664)
chr7 (158-249)||(23155372-23155463)
chr7 (153-249)||(22298146-22298247)
chr7 (155-268)||(42121673-42121786)
chr7 (157-249)||(44453283-44453375)
chr7 (158-249)||(10599513-10599604)
chr7 (158-249)||(13405037-13405128)
chr7 (158-249)||(27935917-27936008)
chr7 (156-269)||(42043895-42044008)
chr7 (158-226)||(40299011-40299079)
chr7 (173-249)||(42879859-42879935)
chr7 (216-271)||(30515103-30515158)
chr7 (168-271)||(31416672-31416775)
chr7 (155-264)||(36915504-36915613)
chr7 (159-226)||(17869410-17869477)
chr7 (157-220)||(42259460-42259523)
chr7 (165-246)||(31418430-31418511)
chr7 (192-247)||(8334238-8334293)
chr7 (194-249)||(24680278-24680333)
chr7 (161-226)||(32275368-32275433)
chr7 (165-226)||(33056203-33056264)
chr7 (150-190)||(6747172-6747212)
chr7 (192-248)||(36808085-36808141)
chr7 (159-223)||(36836248-36836312)
chr7 (158-210)||(40207299-40207351)
[»] chr4 (51 HSPs)
chr4 (155-271)||(47321271-47321387)
chr4 (165-271)||(45889689-45889795)
chr4 (158-271)||(28116371-28116484)
chr4 (157-271)||(17499629-17499743)
chr4 (157-271)||(55126623-55126737)
chr4 (158-271)||(34124421-34124534)
chr4 (165-271)||(24259737-24259843)
chr4 (151-249)||(40345256-40345354)
chr4 (167-271)||(4408099-4408203)
chr4 (165-270)||(19282330-19282435)
chr4 (158-271)||(51434170-51434283)
chr4 (156-271)||(6462140-6462255)
chr4 (158-249)||(37654560-37654651)
chr4 (158-249)||(52957706-52957797)
chr4 (158-235)||(34316384-34316461)
chr4 (155-248)||(39984968-39985061)
chr4 (157-271)||(31941684-31941795)
chr4 (158-249)||(1819712-1819803)
chr4 (161-271)||(54233942-54234052)
chr4 (156-249)||(19878798-19878891)
chr4 (156-249)||(53814411-53814504)
chr4 (157-249)||(44571780-44571872)
chr4 (168-268)||(55548143-55548243)
chr4 (158-249)||(2493252-2493343)
chr4 (158-249)||(18430139-18430230)
chr4 (159-249)||(49080394-49080484)
chr4 (168-249)||(27653824-27653905)
chr4 (148-249)||(42605722-42605823)
chr4 (157-249)||(2728313-2728405)
chr4 (162-249)||(24941030-24941117)
chr4 (157-215)||(56556193-56556251)
chr4 (152-249)||(38991673-38991770)
chr4 (193-249)||(29370753-29370809)
chr4 (165-249)||(29519448-29519532)
chr4 (158-249)||(52847970-52848061)
chr4 (158-249)||(56373491-56373582)
chr4 (194-260)||(34534042-34534108)
chr4 (158-248)||(50623235-50623325)
chr4 (158-249)||(20448189-20448278)
chr4 (158-226)||(29840224-29840292)
chr4 (165-249)||(40010795-40010879)
chr4 (157-249)||(45043503-45043595)
chr4 (173-253)||(49089609-49089689)
chr4 (157-248)||(54042097-54042189)
chr4 (160-235)||(40837294-40837367)
chr4 (158-249)||(41920225-41920316)
chr4 (172-248)||(28734749-28734825)
chr4 (158-226)||(30492889-30492957)
chr4 (155-226)||(32140788-32140859)
chr4 (212-248)||(19930865-19930901)
chr4 (154-210)||(32140897-32140953)
[»] chr8 (36 HSPs)
chr8 (156-271)||(8471386-8471501)
chr8 (158-271)||(34168124-34168237)
chr8 (158-267)||(34461494-34461603)
chr8 (157-249)||(4760470-4760562)
chr8 (192-271)||(13109116-13109195)
chr8 (158-249)||(39463407-39463498)
chr8 (163-249)||(9880418-9880504)
chr8 (173-271)||(14541673-14541771)
chr8 (193-271)||(27416630-27416708)
chr8 (157-264)||(11168818-11168925)
chr8 (173-265)||(18673026-18673118)
chr8 (157-249)||(43448866-43448958)
chr8 (164-249)||(17921107-17921192)
chr8 (170-247)||(4989630-4989707)
chr8 (168-249)||(39698588-39698669)
chr8 (158-226)||(38328967-38329035)
chr8 (194-271)||(32271638-32271713)
chr8 (173-253)||(31693546-31693626)
chr8 (169-249)||(31899171-31899251)
chr8 (158-226)||(36915537-36915605)
chr8 (165-249)||(40228724-40228808)
chr8 (193-249)||(43084574-43084630)
chr8 (158-249)||(44713684-44713775)
chr8 (149-226)||(2803158-2803235)
chr8 (164-249)||(29025667-29025752)
chr8 (165-226)||(32326644-32326705)
chr8 (158-210)||(4530055-4530107)
chr8 (158-226)||(8106800-8106868)
chr8 (158-210)||(9022584-9022636)
chr8 (157-249)||(9304545-9304637)
chr8 (162-226)||(22601307-22601371)
chr8 (158-195)||(22699337-22699374)
chr8 (157-226)||(41415004-41415073)
chr8 (158-226)||(8382399-8382467)
chr8 (162-226)||(32661468-32661532)
chr8 (187-246)||(43594964-43595021)
[»] chr3 (51 HSPs)
chr3 (161-271)||(2988523-2988633)
chr3 (153-271)||(54261545-54261663)
chr3 (158-271)||(20512406-20512519)
chr3 (158-270)||(51381855-51381967)
chr3 (157-271)||(54933114-54933228)
chr3 (158-271)||(32303815-32303928)
chr3 (161-271)||(43687796-43687906)
chr3 (168-269)||(36541623-36541724)
chr3 (158-267)||(25722371-25722480)
chr3 (157-249)||(51398160-51398252)
chr3 (159-248)||(31853472-31853561)
chr3 (157-249)||(33193939-33194031)
chr3 (157-249)||(35557661-35557753)
chr3 (163-271)||(43169464-43169572)
chr3 (157-249)||(45213630-45213722)
chr3 (158-249)||(2458158-2458249)
chr3 (158-249)||(47895253-47895344)
chr3 (165-269)||(44645470-44645575)
chr3 (157-249)||(41287404-41287496)
chr3 (158-249)||(3152716-3152807)
chr3 (158-249)||(41850531-41850622)
chr3 (152-267)||(52201830-52201945)
chr3 (158-249)||(53200590-53200681)
chr3 (157-247)||(49470926-49471016)
chr3 (158-271)||(53560794-53560907)
chr3 (158-226)||(44648322-44648390)
chr3 (158-264)||(6937830-6937934)
chr3 (164-271)||(42006978-42007085)
chr3 (157-249)||(23525224-23525316)
chr3 (166-249)||(38016524-38016607)
chr3 (158-249)||(38363941-38364032)
chr3 (158-249)||(47138115-47138206)
chr3 (158-248)||(51482086-51482177)
chr3 (191-249)||(30426265-30426323)
chr3 (158-248)||(33024210-33024299)
chr3 (158-271)||(647504-647617)
chr3 (158-226)||(31290886-31290954)
chr3 (158-249)||(30431270-30431360)
chr3 (156-215)||(44854497-44854556)
chr3 (157-210)||(19373774-19373827)
chr3 (158-271)||(25061821-25061934)
chr3 (164-249)||(44676371-44676456)
chr3 (154-226)||(16240740-16240812)
chr3 (158-226)||(45095703-45095771)
chr3 (165-271)||(2567931-2568037)
chr3 (167-249)||(39359070-39359152)
chr3 (165-249)||(45566949-45567030)
chr3 (168-249)||(36729691-36729772)
chr3 (153-210)||(52222757-52222814)
chr3 (158-226)||(4392068-4392136)
chr3 (158-202)||(43736783-43736827)
[»] chr1 (57 HSPs)
chr1 (157-271)||(2459133-2459247)
chr1 (161-271)||(42650164-42650274)
chr1 (157-249)||(49468620-49468712)
chr1 (157-271)||(49894909-49895023)
chr1 (158-271)||(22665064-22665177)
chr1 (158-271)||(28200134-28200247)
chr1 (163-271)||(254828-254936)
chr1 (171-271)||(9333207-9333307)
chr1 (171-271)||(9356980-9357080)
chr1 (167-271)||(44582699-44582803)
chr1 (164-271)||(26252247-26252354)
chr1 (165-271)||(5854143-5854249)
chr1 (193-271)||(9552302-9552380)
chr1 (170-265)||(672206-672301)
chr1 (158-249)||(15573763-15573854)
chr1 (158-269)||(50591230-50591341)
chr1 (158-268)||(11134372-11134482)
chr1 (156-249)||(32806846-32806939)
chr1 (157-249)||(10842930-10843022)
chr1 (158-249)||(43358124-43358215)
chr1 (159-249)||(15823184-15823274)
chr1 (163-249)||(48009160-48009246)
chr1 (156-249)||(5463725-5463818)
chr1 (158-271)||(28751320-28751433)
chr1 (156-249)||(49426327-49426420)
chr1 (158-249)||(9915594-9915685)
chr1 (158-249)||(48025164-48025255)
chr1 (167-249)||(25151960-25152042)
chr1 (156-249)||(44108751-44108844)
chr1 (213-269)||(44024676-44024732)
chr1 (158-249)||(46046123-46046214)
chr1 (165-215)||(30006313-30006363)
chr1 (164-249)||(1740556-1740641)
chr1 (158-215)||(48259775-48259832)
chr1 (166-226)||(17919741-17919801)
chr1 (157-249)||(35847845-35847937)
chr1 (157-225)||(45377070-45377138)
chr1 (158-249)||(31491680-31491771)
chr1 (162-253)||(38530753-38530844)
chr1 (193-248)||(43759483-43759538)
chr1 (158-271)||(84430-84543)
chr1 (157-226)||(12851904-12851973)
chr1 (206-271)||(17806335-17806400)
chr1 (165-234)||(34110692-34110761)
chr1 (187-256)||(40717301-40717370)
chr1 (161-226)||(43755199-43755264)
chr1 (154-195)||(50591456-50591497)
chr1 (158-222)||(4471319-4471383)
chr1 (161-249)||(46286731-46286819)
chr1 (158-210)||(48319917-48319969)
chr1 (173-249)||(50094380-50094456)
chr1 (158-226)||(50349769-50349837)
chr1 (164-226)||(6377204-6377266)
chr1 (158-224)||(13408246-13408312)
chr1 (212-253)||(24611483-24611524)
chr1 (158-226)||(45749411-45749479)
chr1 (145-249)||(52125033-52125137)
[»] chr2 (37 HSPs)
chr2 (158-271)||(14698117-14698230)
chr2 (158-271)||(25332699-25332812)
chr2 (158-271)||(43388569-43388682)
chr2 (153-264)||(38809833-38809944)
chr2 (164-271)||(775802-775909)
chr2 (158-249)||(4133172-4133263)
chr2 (173-267)||(39866597-39866692)
chr2 (156-249)||(441141-441234)
chr2 (158-271)||(4566033-4566146)
chr2 (158-249)||(29396592-29396683)
chr2 (158-248)||(16807429-16807519)
chr2 (158-248)||(16846710-16846800)
chr2 (167-271)||(10580777-10580881)
chr2 (158-249)||(29808963-29809054)
chr2 (158-249)||(30855255-30855346)
chr2 (157-249)||(42743178-42743268)
chr2 (174-270)||(33093498-33093593)
chr2 (165-249)||(42753897-42753981)
chr2 (151-249)||(12342243-12342341)
chr2 (163-249)||(32227928-32228014)
chr2 (172-249)||(38926756-38926833)
chr2 (222-271)||(41984548-41984597)
chr2 (157-249)||(25383396-25383488)
chr2 (158-249)||(8789342-8789433)
chr2 (158-249)||(36106315-36106406)
chr2 (158-249)||(8774202-8774293)
chr2 (158-249)||(12393831-12393922)
chr2 (158-249)||(18717226-18717317)
chr2 (157-271)||(2459902-2460016)
chr2 (165-271)||(34225877-34225983)
chr2 (156-271)||(40987192-40987307)
chr2 (165-271)||(7743528-7743634)
chr2 (157-249)||(4288624-4288714)
chr2 (158-271)||(14378160-14378273)
chr2 (160-210)||(43480774-43480824)
chr2 (158-210)||(44228654-44228707)
chr2 (158-226)||(45081818-45081886)
[»] scaffold0047 (1 HSPs)
scaffold0047 (150-271)||(70357-70478)
[»] chr6 (18 HSPs)
chr6 (155-271)||(17345047-17345159)
chr6 (157-249)||(10520301-10520393)
chr6 (193-271)||(6992530-6992608)
chr6 (165-269)||(25932760-25932864)
chr6 (183-271)||(26189638-26189726)
chr6 (193-269)||(6140730-6140806)
chr6 (193-269)||(6143215-6143291)
chr6 (160-249)||(23259239-23259328)
chr6 (158-249)||(1135075-1135166)
chr6 (167-249)||(19675128-19675210)
chr6 (157-248)||(24163624-24163716)
chr6 (158-228)||(234196-234266)
chr6 (210-267)||(34576677-34576734)
chr6 (157-249)||(29713317-29713409)
chr6 (157-249)||(24555837-24555930)
chr6 (158-226)||(31275553-31275621)
chr6 (157-271)||(12828591-12828706)
chr6 (157-226)||(30627254-30627323)
[»] scaffold0015 (1 HSPs)
scaffold0015 (157-249)||(20992-21084)
[»] scaffold0003 (1 HSPs)
scaffold0003 (169-269)||(321857-321957)
[»] scaffold0110 (1 HSPs)
scaffold0110 (158-249)||(24652-24743)
[»] scaffold0078 (1 HSPs)
scaffold0078 (158-246)||(1360-1448)
[»] scaffold0758 (1 HSPs)
scaffold0758 (158-245)||(6239-6326)
[»] scaffold0294 (1 HSPs)
scaffold0294 (195-248)||(3453-3506)
[»] scaffold0048 (1 HSPs)
scaffold0048 (172-249)||(62783-62860)
[»] scaffold0072 (1 HSPs)
scaffold0072 (158-226)||(11994-12062)
[»] scaffold0580 (2 HSPs)
scaffold0580 (156-271)||(1701-1816)
scaffold0580 (156-271)||(9440-9555)
[»] scaffold0565 (1 HSPs)
scaffold0565 (157-216)||(9571-9630)
[»] scaffold0060 (1 HSPs)
scaffold0060 (161-226)||(31716-31781)
[»] scaffold0026 (1 HSPs)
scaffold0026 (155-195)||(4091-4131)


Alignment Details
Target: chr5 (Bit Score: 258; Significance: 1e-144; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 2 - 271
Target Start/End: Original strand, 33822257 - 33822526
Alignment:
Q  2 caaattaattggttacttacatcaaagttctattttgaaattcgcatgtagtcaaagaaaaagggtgggtcatgtttatattatgagtggtgtattcatc 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33822257 caaattaattggttacttacatcaaagttctattttgaaattcgcatgtagtcaaagaaaaagggtgggtcatgtttatattatgagtggtgtattcatc 33822356  T
Q  102 ctcttatatgtactcatagagagtagtgtttgagctatttagcttttgatattttatactccctccgtttcaaaatgaatatcgctttaaccaattgcac 201  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  33822357 ctcttatttgtactcatagagagtagtgtttgagctatttagcttttgatattttatactccctccgtttcaaaatgaatatcgttttaaccaattgcac 33822456  T
Q  202 acagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttactttataag 271  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33822457 acagattaattaatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttactttataag 33822526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 165 - 271
Target Start/End: Original strand, 42329463 - 42329569
Alignment:
Q  165 tccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttact 264  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  42329463 tccgtttcaaaatgagtatcgctttaaccaattgcacacaaattaaggaatgaaataaagtagtcaaatgtcatagcaattttactaaaataaccttact 42329562  T
Q  265 ttataag 271  Q
    |||||||    
T  42329563 ttataag 42329569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 158 - 271
Target Start/End: Original strand, 29653424 - 29653537
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataa 257  Q
    |||||||||| ||| ||||||| | ||| |||| ||||||||| || |||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  29653424 tactccctccattttaaaatgagtgtcgttttagccaattgcatacggattaaagaatgaaataaaatagtcaaatgtcatagcaattttactaaaataa 29653523  T
Q  258 ccttactttataag 271  Q
    | ||||||||||||    
T  29653524 cgttactttataag 29653537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 156 - 269
Target Start/End: Original strand, 36296042 - 36296155
Alignment:
Q  156 tatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaat 255  Q
    ||||||| |||||||| ||||||| | |||||||| |||||||||||  |||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  36296042 tatactcactccgttttaaaatgagtgtcgctttagccaattgcacatggattaaagaatgaaataaaataatcaaatgtaatagcaattttactaaaat 36296141  T
Q  256 aaccttactttata 269  Q
    ||||||| ||||||    
T  36296142 aaccttaatttata 36296155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 165 - 271
Target Start/End: Original strand, 27652238 - 27652344
Alignment:
Q  165 tccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttact 264  Q
    ||||||| ||||||| | ||||||||  ||||| ||||||||||||  |||| |||||||||||||||||| ||| ||||||||||||||||||||||||    
T  27652238 tccgttttaaaatgagtgtcgctttaggcaattacacacagattaagaaatggaataaaatagtcaaatgtcataacaattttactaaaataaccttact 27652337  T
Q  265 ttataag 271  Q
    |||||||    
T  27652338 ttataag 27652344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 249
Target Start/End: Original strand, 42103975 - 42104066
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||||||||||||||||||| | |||||||| ||||||||||||| ||||| ||||| |||||| ||||||||||| |||||||||||||    
T  42103975 tactccctccgtttcaaaatgagtgtcgctttagccaattgcacacatattaaggaatggaataaagtagtcaaatgtcatagcaattttac 42104066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 151 - 249
Target Start/End: Original strand, 42661845 - 42661943
Alignment:
Q  151 tattttatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||| ||||||| | ||||||||||||| | |||||||| ||||||||||||| ||||| |||||||||||||||||||||||| ||| |||||||||    
T  42661845 tatttaatactccattcgtttcaaaatgagtgtcgctttagccaattgcacacatattaaggaatgaaataaaatagtcaaatgtcataacaattttac 42661943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 187 - 271
Target Start/End: Original strand, 793545 - 793629
Alignment:
Q  187 tttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttactttataag 271  Q
    |||| ||||||||||||| ||||| ||||| |||||| ||||| ||||| |||||||||||||||||||||||||||||||||||    
T  793545 tttagccaattgcacacaaattaaggaatggaataaagtagtccaatgtcatagcaattttactaaaataaccttactttataag 793629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 2729697 - 2729789
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||| ||||||||||||||| | |||||||| ||||||||| ||||||||| |||||||||||| |||||||| || |||||||||||||    
T  2729697 atactccatccgtttcaaaatgattgtcgctttagccaattgcatacagattaaggaatgaaataaagtagtcaaacgtcatagcaattttac 2729789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 157 - 249
Target Start/End: Complemental strand, 26660996 - 26660904
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||||||||||| ||||||| | |||||||| ||||||||||||| ||||| |||||||||||| | ||||||||| |||||||||||||    
T  26660996 atactccctccgttttaaaatgagtgtcgctttagccaattgcacacatattaaggaatgaaataaagttgtcaaatgtcatagcaattttac 26660904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 157 - 249
Target Start/End: Complemental strand, 26932589 - 26932497
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||||||||||| ||||||| | |||||||| ||||||||||||| ||||| |||||||||||| | ||||||||| |||||||||||||    
T  26932589 atactccctccgttttaaaatgagtgtcgctttagccaattgcacacatattaaggaatgaaataaagttgtcaaatgtcatagcaattttac 26932497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 249
Target Start/End: Complemental strand, 39566424 - 39566333
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||||||| ||||||||||| | ||||||||||||||| |||||| ||||| |||||||||||| ||||||||||| ||| |||||||||    
T  39566424 tactccctccatttcaaaatgagtgtcgctttaaccaattacacacatattaaggaatgaaataaagtagtcaaatgtcataacaattttac 39566333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 173 - 271
Target Start/End: Original strand, 32962935 - 32963033
Alignment:
Q  173 aaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttactttataag 271  Q
    ||||||| | |||||||||| |||||||||||||||||| ||||||||| | ||||||| ||| |||||| ||||| ||||||||| ||||||||||||    
T  32962935 aaaatgagtgtcgctttaactaattgcacacagattaattaatgaaatagagtagtcaattgtcatagcagttttattaaaataactttactttataag 32963033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 158 - 271
Target Start/End: Complemental strand, 34919976 - 34919863
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataa 257  Q
    |||||||| | ||||||||||| |||||||||| |||||| |||||||||||| ||||||||||||||| |||   |  ||||||||||||||||| |      
T  34919976 tactcccttcctttcaaaatgagtatcgctttagccaattacacacagattaaggaatgaaataaaataatcattggacatagcaattttactaaactgc 34919877  T
Q  258 ccttactttataag 271  Q
    ||||||||||||||    
T  34919876 ccttactttataag 34919863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 161 - 265
Target Start/End: Original strand, 4833551 - 4833655
Alignment:
Q  161 tccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataacct 260  Q
    ||||||| ||| ||||||| | |||||||| ||||||||||| |  |||| |||||||||||| |||| |||||| ||| ||||||||||||||||||||    
T  4833551 tccctccattttaaaatgagtgtcgctttagccaattgcacatatgttaaggaatgaaataaagtagttaaatgtcataacaattttactaaaataacct 4833650  T
Q  261 tactt 265  Q
    |||||    
T  4833651 tactt 4833655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 34972561 - 34972653
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||||||||||| ||||||| | |||||||| |||||||||||||||||||| |||| |||||| |||||||||||  || |||||||||    
T  34972561 atactccctccgttttaaaatgagtgtcgctttagccaattgcacacagattaataaatggaataaagtagtcaaatgtcgtatcaattttac 34972653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 165 - 249
Target Start/End: Original strand, 21375569 - 21375653
Alignment:
Q  165 tccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||||||||||| | || ||||| ||||||||||| ||||||| ||||| |||||||||||||||| | |||||||||||||    
T  21375569 tccgtttcaaaatgagtgtcactttagccaattgcacaaagattaaagaatggaataaaatagtcaaatatcatagcaattttac 21375653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 264
Target Start/End: Complemental strand, 15567155 - 15567048
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaata 256  Q
    ||||||||||| ||||||||||| | |||||||| ||| || |||||||||||| ||||| ||| |  ||||||||| | |||||||||||||| |||||    
T  15567155 atactccctccatttcaaaatgagtgtcgctttagccattttcacacagattaaggaatgcaatcatttagtcaaatatcatagcaattttactgaaata 15567056  T
Q  257 accttact 264  Q
     |||||||    
T  15567055 gccttact 15567048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 3305919 - 3306012
Alignment:
Q  157 atactccctccgttt-caaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||| |||||||| |||||||| | ||| |||||||||||||||  | ||||| |||||||||||| ||||||||||| |||||||||||||    
T  3305919 atactctctccgttttcaaaatgagtgtcgttttaaccaattgcacgtatattaaggaatgaaataaagtagtcaaatgtcatagcaattttac 3306012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 183 - 267
Target Start/End: Original strand, 33584912 - 33584994
Alignment:
Q  183 tcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttacttta 267  Q
    |||||||||||||||||||   ||||||  || | |||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  33584912 tcgctttaaccaattgcacg--gattaagaaacggaataaaatagtcaaatgtcataacaattttactaaaataaccttacttta 33584994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 158 - 271
Target Start/End: Complemental strand, 36660666 - 36660553
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataa 257  Q
    ||||||||| |||||||||||| | |||||||| | ||||||||||||||||| ||||||||| ||||| |||   |  ||| || ||||||||||||      
T  36660666 tactccctctgtttcaaaatgagtgtcgctttagctaattgcacacagattaaggaatgaaatgaaataatcattagacataacacttttactaaaatgt 36660567  T
Q  258 ccttactttataag 271  Q
    ||||||||||||||    
T  36660566 ccttactttataag 36660553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 166561 - 166629
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaata 226  Q
    |||||||||||||||||||||| | |||| ||| ||||||||||||||||||| ||||||||| |||||    
T  166561 tactccctccgtttcaaaatgagtgtcgcgttagccaattgcacacagattaaggaatgaaatgaaata 166629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 34445940 - 34446015
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaat 233  Q
    ||||||||||||||| ||||||| | |||||||||||||||||||| | ||||| |||||||||||| |||||||||    
T  34445940 atactccctccgttt-aaaatgagtgtcgctttaaccaattgcacatatattaaggaatgaaataaagtagtcaaat 34446015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 249
Target Start/End: Original strand, 29807226 - 29807317
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||||||||||||||||| | | |||||||| ||||| |||| || ||||| ||||| |||||| ||||||||||| |||| ||||||||    
T  29807226 tactccctccgtttcaaaataagtgtcgctttagccaatagcacgcatattaaggaatggaataaattagtcaaatgtaatagaaattttac 29807317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 249
Target Start/End: Complemental strand, 14006136 - 14006042
Alignment:
Q  155 ttatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||||||||  ||||||||||| | | |||||| ||||||||| | | ||||| |||||||||||| ||||||||||| ||||| |||||||    
T  14006136 ttatactccctctatttcaaaatgagtgttgctttagccaattgcatatatattaaggaatgaaataaagtagtcaaatgtcatagctattttac 14006042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Complemental strand, 36783598 - 36783544
Alignment:
Q  156 tatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaa 210  Q
    |||||| ||||||||||||||||| |||||||||| |||||||||||||||||||    
T  36783598 tatacttcctccgtttcaaaatgagtatcgctttagccaattgcacacagattaa 36783544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 187 - 249
Target Start/End: Original strand, 42978014 - 42978076
Alignment:
Q  187 tttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||| |||||| |||||||||||| |||||||||||| ||||||||||| |||||||||||||    
T  42978014 tttagccaatttcacacagattaaggaatgaaataaagtagtcaaatgtcatagcaattttac 42978076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 248
Target Start/End: Original strand, 14620412 - 14620496
Alignment:
Q  165 tccgtttcaaa-atgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaatttta 248  Q
    ||||||||||| |||| | |||||||| ||||||||||||| ||||| ||||  |||||| ||||||||||| ||||||||||||    
T  14620412 tccgtttcaaatatgagtgtcgctttagccaattgcacacatattaaggaatagaataaagtagtcaaatgtcatagcaatttta 14620496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 249
Target Start/End: Complemental strand, 39730178 - 39730096
Alignment:
Q  167 cgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||| ||||||| | ||| ||||  |||||||||||| ||||| ||||| |||||| ||||||||||| |||||||||||||    
T  39730178 cgttttaaaatgagtgtcgttttaggcaattgcacacatattaaggaatggaataaagtagtcaaatgtcatagcaattttac 39730096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 4371592 - 4371523
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaata 226  Q
    ||||||||||||||||||||||| | ||| |||||| ||||||||||| ||||| ||||| ||| |||||    
T  4371592 atactccctccgtttcaaaatgagtgtcgttttaactaattgcacacaaattaaggaatggaatgaaata 4371523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 215
Target Start/End: Complemental strand, 7145097 - 7145032
Alignment:
Q  150 atattttatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaat 215  Q
    |||| ||||||||||||||||||||||||| | | |||||| ||||||||||||| ||||| ||||    
T  7145097 atatcttatactccctccgtttcaaaatgagtgttgctttagccaattgcacacaaattaaggaat 7145032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 226
Target Start/End: Original strand, 38982073 - 38982134
Alignment:
Q  165 tccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaata 226  Q
    ||||||||||||||||| ||| |||| ||||||||||||| ||||| ||||||||| |||||    
T  38982073 tccgtttcaaaatgaatgtcgttttagccaattgcacacaaattaaggaatgaaatgaaata 38982134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 158 - 222
Target Start/End: Original strand, 21375481 - 21375545
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataa 222  Q
    |||||||||||||||||||| | |  | ||||| ||||||||||||||||||||||||| |||||    
T  21375481 tactccctccgtttcaaaataagtgccactttagccaattgcacacagattaatgaatggaataa 21375545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 249
Target Start/End: Original strand, 8336319 - 8336410
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||||||| ||| ||||||| | ||| |||| |||||| |||| | ||||| ||||| |||||| ||||||||||| ||| |||||||||    
T  8336319 tactccctccattttaaaatgagtgtcgttttagccaattacacaaatattaaggaatggaataaagtagtcaaatgtcataacaattttac 8336410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 233
Target Start/End: Complemental strand, 27600635 - 27600560
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaat 233  Q
    |||||||||| ||| ||||||| | || ||||| ||||||| ||||| ||||| |||||||||||| |||||||||    
T  27600635 tactccctccattttaaaatgagtgtcactttagccaattgaacacatattaaggaatgaaataaagtagtcaaat 27600560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 271
Target Start/End: Complemental strand, 34171334 - 34171291
Alignment:
Q  228 tcaaatgttatagcaattttactaaaataaccttactttataag 271  Q
    |||||||| |||| ||||||||||||||||||||||||||||||    
T  34171334 tcaaatgtcatagaaattttactaaaataaccttactttataag 34171291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 226
Target Start/End: Complemental strand, 41567017 - 41566947
Alignment:
Q  156 tatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaata 226  Q
    |||||||| ||||||||||||||||  | | |||| | |||||||||||  ||||||||||||||||||||    
T  41567017 tatactccatccgtttcaaaatgaaggtggttttagctaattgcacacaagttaatgaatgaaataaaata 41566947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 226
Target Start/End: Original strand, 43257771 - 43257840
Alignment:
Q  156 tatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaata 226  Q
    |||||||||||||||| ||||||| | | | |||| ||||||||||||||||||| ||||||||| |||||    
T  43257771 tatactccctccgttttaaaatgagtgt-gttttagccaattgcacacagattaaagaatgaaatgaaata 43257840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 176 - 231
Target Start/End: Original strand, 32690692 - 32690747
Alignment:
Q  176 atgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaa 231  Q
    |||||| ||| |||||||||||||||||| |||||| |||||||| ||||| ||||    
T  32690692 atgaatgtcgttttaaccaattgcacacaaattaataaatgaaatgaaataatcaa 32690747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 210
Target Start/End: Original strand, 12167520 - 12167574
Alignment:
Q  156 tatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaa 210  Q
    ||||||| |||||||||||||||| | |||||||| | ||||||||||| |||||    
T  12167520 tatactctctccgtttcaaaatgagtgtcgctttagctaattgcacacaaattaa 12167574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 226
Target Start/End: Original strand, 24436454 - 24436520
Alignment:
Q  160 ctccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaata 226  Q
    |||||||||||| ||||||| | ||| |||| ||||||||||| ||||||| |||| |||| |||||    
T  24436454 ctccctccgttttaaaatgagtgtcgttttagccaattgcacatagattaaggaataaaatgaaata 24436520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 222
Target Start/End: Complemental strand, 28798290 - 28798220
Alignment:
Q  152 attttatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataa 222  Q
    |||||||| | | ||| ||||||||| | | ||||||||||||||| |||||| ||||| |||||||||||    
T  28798290 attttatatttcatccctttcaaaataattgtcgctttaaccaattacacacatattaaggaatgaaataa 28798220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 192
Target Start/End: Complemental strand, 29051711 - 29051677
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaac 192  Q
    |||||||||||||| ||||||||||||||||||||    
T  29051711 tactccctccgttttaaaatgaatatcgctttaac 29051677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 222
Target Start/End: Complemental strand, 39060034 - 39059977
Alignment:
Q  165 tccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataa 222  Q
    ||||||| ||||||| |||| ||||| ||||||| ||| ||||||| |||||||||||    
T  39060034 tccgtttaaaaatgagtatcactttagccaattgtacatagattaaggaatgaaataa 39059977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 195
Target Start/End: Complemental strand, 2729988 - 2729948
Alignment:
Q  155 ttatactccctccgtttcaaaatgaatatcgctttaaccaa 195  Q
    ||||||||||||||||||||||||| | ||| |||||||||    
T  2729988 ttatactccctccgtttcaaaatgagtgtcgttttaaccaa 2729948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 271
Target Start/End: Complemental strand, 29044888 - 29044848
Alignment:
Q  231 aatgttatagcaattttactaaaataaccttactttataag 271  Q
    ||||| ||| ||||||||||||||||| |||||||||||||    
T  29044888 aatgtcataacaattttactaaaataatcttactttataag 29044848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 249
Target Start/End: Complemental strand, 39504967 - 39504875
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||| ||||||| ||||||| | ||||||||  ||||| |  ||| ||||| |||||||||||| |||| ||||||  || |||||||||    
T  39504967 atactccatccgttttaaaatgagtgtcgctttagtcaattacgtacatattaaagaatgaaataaagtagtaaaatgtcgtaacaattttac 39504875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 4e-38; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 157 - 269
Target Start/End: Complemental strand, 19906656 - 19906544
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaata 256  Q
    ||||||||||||||||||||||| | |||||||| |||||||||||  |||||| ||||| |||||||||||||||||| ||||||||||||||||||||    
T  19906656 atactccctccgtttcaaaatgagtgtcgctttagccaattgcacatggattaaggaatggaataaaatagtcaaatgtcatagcaattttactaaaata 19906557  T
Q  257 accttactttata 269  Q
    |||||||||||||    
T  19906556 accttactttata 19906544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 157 - 271
Target Start/End: Original strand, 32345745 - 32345859
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaata 256  Q
    ||||||||||||||||||||||| | |||||||| |||||||||||||||||||  |||  |||||| ||||||||||| ||| ||||||||||||||||    
T  32345745 atactccctccgtttcaaaatgagtgtcgctttagccaattgcacacagattaagaaattgaataaagtagtcaaatgtcataacaattttactaaaata 32345844  T
Q  257 accttactttataag 271  Q
    |||||||||||||||    
T  32345845 accttactttataag 32345859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 158 - 271
Target Start/End: Complemental strand, 6522060 - 6521947
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataa 257  Q
    |||||||||||||| ||||||| | |||||||| ||||||||||||| ||||| |||||||||||| ||||||||||| ||| ||||| |||||||||||    
T  6522060 tactccctccgttttaaaatgagtgtcgctttagccaattgcacacaaattaaggaatgaaataaagtagtcaaatgtcataacaattatactaaaataa 6521961  T
Q  258 ccttactttataag 271  Q
    ||||||||||||||    
T  6521960 ccttactttataag 6521947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 153 - 271
Target Start/End: Complemental strand, 26963727 - 26963609
Alignment:
Q  153 ttttatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaa 252  Q
    ||||||||||| ||||||||||||||| | | |||||||||| || |||||| |||||  |||| |||||||||||||||||| ||| ||||||||||||    
T  26963727 ttttatactccatccgtttcaaaatgagtgttgctttaaccatttacacacaaattaagaaatggaataaaatagtcaaatgtcataacaattttactaa 26963628  T
Q  253 aataaccttactttataag 271  Q
    |||||||||||||||||||    
T  26963627 aataaccttactttataag 26963609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 161 - 271
Target Start/End: Original strand, 39117403 - 39117513
Alignment:
Q  161 tccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataacct 260  Q
    ||||||||||| ||||||| | |||||||| ||| ||||||||||||||| ||||| |||||| ||||||||||| ||| ||||||||||||||||||||    
T  39117403 tccctccgttttaaaatgagtgtcgctttatccacttgcacacagattaaagaatggaataaagtagtcaaatgtcataacaattttactaaaataacct 39117502  T
Q  261 tactttataag 271  Q
    |||||||||||    
T  39117503 tactttataag 39117513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 158 - 269
Target Start/End: Original strand, 19276528 - 19276638
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataa 257  Q
    ||||| |||| ||||||||| | | |||||||| ||||||||||||||||||| ||||||| |||| ||||||||||||||||||| |||||| ||||||    
T  19276528 tactctctccatttcaaaatcagtgtcgctttagccaattgcacacagattaaggaatgaagtaaagtagtcaaatgttatagcaa-tttacttaaataa 19276626  T
Q  258 ccttactttata 269  Q
    ||||||||||||    
T  19276627 ccttactttata 19276638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 157 - 271
Target Start/End: Original strand, 36446980 - 36447094
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaata 256  Q
    ||||||| || |||| ||||||| | | ||||||  |||||||||||| ||||||||||| |||||| ||||||||||| ||||||||||||||||||||    
T  36446980 atactccatctgttttaaaatgagtgttgctttagacaattgcacacaaattaatgaatggaataaagtagtcaaatgtcatagcaattttactaaaata 36447079  T
Q  257 accttactttataag 271  Q
    || ||||||||||||    
T  36447080 acattactttataag 36447094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 1742234 - 1742141
Alignment:
Q  156 tatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||||||||||||||||||||| | |||||||| ||||||||||||| ||||| ||||| |||||| ||||||||||| |||||||||||||    
T  1742234 tatactccctccgtttcaaaatgagtgtcgctttagccaattgcacacatattaaggaatggaataaagtagtcaaatgtcatagcaattttac 1742141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 253
Target Start/End: Original strand, 27947411 - 27947506
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaa 253  Q
    |||||| ||||||||||||||| | || ||||||||||||||||||| ||||||||||  |||||| ||||||||||| |||||||||||||||||    
T  27947411 tactccatccgtttcaaaatgagtgtcactttaaccaattgcacacatattaatgaattgaataaagtagtcaaatgtcatagcaattttactaaa 27947506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 157 - 249
Target Start/End: Complemental strand, 37815966 - 37815874
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||||||||||| ||||||| | ||| |||| ||||||||||||| ||||| ||||| |||||||||||||||||| |||||||||||||    
T  37815966 atactccctccgttttaaaatgagtgtcgttttagccaattgcacacatattaaagaatggaataaaatagtcaaatgtcatagcaattttac 37815874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 158 - 262
Target Start/End: Complemental strand, 48684964 - 48684860
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataa 257  Q
    ||||||||| |||| ||||||| | ||||||||| |||||||||||||||||| |||||||||||| ||||||||||| ||| ||||||||| ||| ||     
T  48684964 tactccctcagttttaaaatgagtgtcgctttaatcaattgcacacagattaaggaatgaaataaagtagtcaaatgtcataacaattttaccaaattat 48684865  T
Q  258 cctta 262  Q
    |||||    
T  48684864 cctta 48684860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 271
Target Start/End: Original strand, 10684740 - 10684854
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaata 256  Q
    ||||||| ||||||||||||| | | ||| ||||| ||||| |||| | ||||| |||| |||||||||||| |||| | ||| ||||||||||||||||    
T  10684740 atactccatccgtttcaaaataagtgtcgttttaatcaattacacatatattaaggaataaaataaaatagttaaatatcataacaattttactaaaata 10684839  T
Q  257 accttactttataag 271  Q
    |||||||||||||||    
T  10684840 accttactttataag 10684854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 165 - 246
Target Start/End: Original strand, 16564720 - 16564801
Alignment:
Q  165 tccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattt 246  Q
    ||||||| ||||||| | |||||||||||||||||| ||||||||| |||||||||||| ||||||||||| ||||||||||    
T  16564720 tccgttttaaaatgagtgtcgctttaaccaattgcatacagattaaggaatgaaataaagtagtcaaatgtcatagcaattt 16564801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 165 - 246
Target Start/End: Complemental strand, 16600942 - 16600861
Alignment:
Q  165 tccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattt 246  Q
    ||||||| ||||||| | |||||||||||||||||| ||||||||| |||||||||||| ||||||||||| ||||||||||    
T  16600942 tccgttttaaaatgagtgtcgctttaaccaattgcatacagattaaggaatgaaataaagtagtcaaatgtcatagcaattt 16600861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 29530844 - 29530936
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||||| ||||| ||||||| | ||| |||| ||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||||||    
T  29530844 atactcccttcgttttaaaatgagtgtcgatttagccaattgcacacagattaaggaataaaataaagtagtcaaatgtcatagcaattttac 29530936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 249
Target Start/End: Original strand, 7795153 - 7795244
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||| ||||||||||||||| | |||||||| ||||||| ||||| ||||| |||||||||||| |||| |||||| |||||||||||||    
T  7795153 tactccatccgtttcaaaatgagtgtcgctttagccaattgtacacaaattaaggaatgaaataaagtagtaaaatgtcatagcaattttac 7795244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 249
Target Start/End: Complemental strand, 35778060 - 35777969
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||| |||||||| ||||||| |||||||||| | ||||||||||| ||||| |||||||||||| ||||||||||| ||| |||||||||    
T  35778060 tactctctccgttttaaaatgagtatcgctttagctaattgcacacatattaaggaatgaaataaagtagtcaaatgtcataacaattttac 35777969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 45933498 - 45933589
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaatttta 248  Q
    ||||||||||||||| ||||||| | |||||||| ||| ||||||||||||||| ||||  |||||||||||||||| | ||||||||||||    
T  45933498 atactccctccgttttaaaatgagtgtcgctttagccacttgcacacagattaaggaattgaataaaatagtcaaatatcatagcaatttta 45933589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 23935664 - 23935571
Alignment:
Q  156 tatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||||||||||||| ||||||| | |||||||| ||||||| || || ||||| ||||| |||||| ||||||||||| |||||||||||||    
T  23935664 tatactccctccgttttaaaatgagtgtcgctttacccaattgtacccacattaaagaatggaataaagtagtcaaatgtcatagcaattttac 23935571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 249
Target Start/End: Original strand, 23155372 - 23155463
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||| ||||||| ||||||| |||||||||| ||||||||| ||||||||| ||||  |||||| |||| |||||| |||||||||||||    
T  23155372 tactccatccgttttaaaatgagtatcgctttagccaattgcatacagattaaagaattgaataaagtagttaaatgtcatagcaattttac 23155463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 153 - 249
Target Start/End: Complemental strand, 22298247 - 22298146
Alignment:
Q  153 ttttatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatg-----aaataaaatagtcaaatgttatagcaatttt 247  Q
    |||||||||||||| |||||||||||| | ||| |||| ||||||||||||||||||| |||||     || |||| ||||||||||| |||||||||||    
T  22298247 ttttatactccctctgtttcaaaatgagtgtcgttttagccaattgcacacagattaaggaatggaataaagtaaagtagtcaaatgtcatagcaatttt 22298148  T
Q  248 ac 249  Q
    ||    
T  22298147 ac 22298146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 155 - 268
Target Start/End: Complemental strand, 42121786 - 42121673
Alignment:
Q  155 ttatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaa 254  Q
    ||||||| ||||| ||||||||||| | |||||||| ||||||||||||||||||| ||||||||| ||||| |||   |  ||| || ||||||||||     
T  42121786 ttatacttcctccatttcaaaatgagtgtcgctttagccaattgcacacagattaaggaatgaaatcaaataatcattagacatatcacttttactaaac 42121687  T
Q  255 taaccttactttat 268  Q
    | ||||||||||||    
T  42121686 tgaccttactttat 42121673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 249
Target Start/End: Complemental strand, 44453375 - 44453283
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||| ||||||| ||||||| | ||| |||| ||||||||| ||||||||| ||||| |||||| ||||||||||| ||| |||||||||    
T  44453375 atactccttccgttttaaaatgagtgtcgttttagccaattgcatacagattaaagaatggaataaagtagtcaaatgtcataacaattttac 44453283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 249
Target Start/End: Complemental strand, 10599604 - 10599513
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||| |||||||| ||||||| | ||| ||||| |||||||||| | ||||| ||||| |||||| ||||||||||| |||||||||||||    
T  10599604 tactctctccgttttaaaatgagtgtcgttttaatcaattgcacatatattaaggaatggaataaagtagtcaaatgtcatagcaattttac 10599513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 249
Target Start/End: Original strand, 13405037 - 13405128
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||| || |||| ||||||| | ||| |||||||||||||||||| |||||  ||||||||||| |||||||||||  ||||||||||||    
T  13405037 tactccttctgttttaaaatgagtgtcgttttaaccaattgcacacatattaagaaatgaaataaagtagtcaaatgtcgtagcaattttac 13405128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 249
Target Start/End: Complemental strand, 27936008 - 27935917
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||| ||||||||||||||| | |||||||| |||| |||||||||||||| ||||  |||||| |||||||| || ||| |||||||||    
T  27936008 tactccatccgtttcaaaatgagtgtcgctttagccaactgcacacagattaaggaattgaataaagtagtcaaaagtcataacaattttac 27935917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 156 - 269
Target Start/End: Original strand, 42043895 - 42044008
Alignment:
Q  156 tatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaat 255  Q
    ||||||||||||||||||||||||   ||  |||| |||||||||||| ||||||   || ||||||| |||| |||||| | |  ||||||||||||||    
T  42043895 tatactccctccgtttcaaaatgagcgtcattttagccaattgcacacggattaagagataaaataaagtagttaaatgtcaaaataattttactaaaat 42043994  T
Q  256 aaccttactttata 269  Q
    ||||| ||||||||    
T  42043995 aacctaactttata 42044008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 226
Target Start/End: Complemental strand, 40299079 - 40299011
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaata 226  Q
    |||||||||||||||||||||| | ||| |||| ||||||||||||| ||||| ||||||||| |||||    
T  40299079 tactccctccgtttcaaaatgagtgtcgttttagccaattgcacacaaattaaggaatgaaatgaaata 40299011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 173 - 249
Target Start/End: Original strand, 42879859 - 42879935
Alignment:
Q  173 aaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||| | |||||||| ||||||||||||||| ||| ||||| |||||| ||| ||||||| |||||||||||||    
T  42879859 aaaatgagtgtcgctttagccaattgcacacagagtaaggaatggaataaagtaggcaaatgtcatagcaattttac 42879935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 216 - 271
Target Start/End: Complemental strand, 30515158 - 30515103
Alignment:
Q  216 gaaataaaatagtcaaatgttatagcaattttactaaaataaccttactttataag 271  Q
    |||||||||||||| |||||||||| ||||||| ||||||||||||||||| ||||    
T  30515158 gaaataaaatagtcgaatgttatagtaattttattaaaataaccttactttttaag 30515103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 31416672 - 31416775
Alignment:
Q  168 gtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttacttta 267  Q
    |||| ||||||| | || ||||| | ||||||||||  ||||| |||||||||||| || |||||||| | | ||||||||||||||||| |||| ||||    
T  31416672 gttttaaaatgattgtcactttagctaattgcacacgaattaaggaatgaaataaagtaatcaaatgtcaaaacaattttactaaaataatcttatttta 31416771  T
Q  268 taag 271  Q
    ||||    
T  31416772 taag 31416775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 264
Target Start/End: Complemental strand, 36915613 - 36915504
Alignment:
Q  155 ttatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaa 254  Q
    |||||||| |||||||| ||||||| | ||| |||| ||| || |||| ||||||| ||||| ||| |  ||||||||| | |||||||||||||| |||    
T  36915613 ttatactctctccgttttaaaatgagtgtcgttttagccattttcacatagattaaggaatgcaatcatttagtcaaatatcatagcaattttactgaaa 36915514  T
Q  255 taaccttact 264  Q
    || |||||||    
T  36915513 tagccttact 36915504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 226
Target Start/End: Complemental strand, 17869477 - 17869410
Alignment:
Q  159 actccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaata 226  Q
    |||||||| |||||||||||||| | | ||||  |||||||||||||||||| ||||||||| |||||    
T  17869477 actccctctgtttcaaaatgaatgttgttttagtcaattgcacacagattaaggaatgaaatgaaata 17869410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 42259460 - 42259523
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaat 220  Q
    ||||||| ||||||||||||||| | ||||| || |||||||||||| |||||| |||||||||    
T  42259460 atactccttccgtttcaaaatgagtgtcgctctagccaattgcacacggattaaagaatgaaat 42259523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 246
Target Start/End: Original strand, 31418430 - 31418511
Alignment:
Q  165 tccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattt 246  Q
    ||||||| ||||| | | ||||||||| |||||||||| | |||||  |||| |||||| ||||||||||| ||||||||||    
T  31418430 tccgttttaaaataagtgtcgctttaatcaattgcacatatattaagaaatggaataaagtagtcaaatgtcatagcaattt 31418511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 8334238 - 8334293
Alignment:
Q  192 ccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaatttt 247  Q
    |||||||||||||||||||  |||| |||||| ||||||||||| ||| |||||||    
T  8334238 ccaattgcacacagattaagaaatgtaataaagtagtcaaatgtcataacaatttt 8334293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 24680333 - 24680278
Alignment:
Q  194 aattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||||| | ||||| |||||||||||| ||||||||||| ||| |||||||||    
T  24680333 aattgcacatatattaaggaatgaaataaagtagtcaaatgtcataacaattttac 24680278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 226
Target Start/End: Complemental strand, 32275433 - 32275368
Alignment:
Q  161 tccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaata 226  Q
    ||||||||||| |||||||   ||| |||||||||||||||||| |||||  |||||||| |||||    
T  32275433 tccctccgttttaaaatgagcgtcgttttaaccaattgcacacatattaagaaatgaaatgaaata 32275368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 226
Target Start/End: Original strand, 33056203 - 33056264
Alignment:
Q  165 tccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaata 226  Q
    ||||||||||||||| | ||| ||||  |||||||||| ||||||| ||||||||| |||||    
T  33056203 tccgtttcaaaatgagtgtcgttttagtcaattgcacatagattaaggaatgaaatgaaata 33056264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 190
Target Start/End: Original strand, 6747172 - 6747212
Alignment:
Q  150 atattttatactccctccgtttcaaaatgaatatcgcttta 190  Q
    |||| ||||||||||||||||||||||||| | ||||||||    
T  6747172 atatattatactccctccgtttcaaaatgagtgtcgcttta 6747212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 248
Target Start/End: Complemental strand, 36808141 - 36808085
Alignment:
Q  192 ccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaatttta 248  Q
    ||||||||| ||| ||||| ||||  |||||| ||||||||||| ||||||||||||    
T  36808141 ccaattgcatacatattaaagaatataataaagtagtcaaatgtcatagcaatttta 36808085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 223
Target Start/End: Complemental strand, 36836312 - 36836248
Alignment:
Q  159 actccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaa 223  Q
    |||| |||||||||||||| | | ||| |||| ||||||| |||| |||||| ||||||||||||    
T  36836312 actctctccgtttcaaaatcagtgtcgttttagccaattgtacacggattaaggaatgaaataaa 36836248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 40207299 - 40207351
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaa 210  Q
    |||||| ||||||||||||||| | | |||||| ||||||||||||| |||||    
T  40207299 tactccatccgtttcaaaatgagtgttgctttagccaattgcacacatattaa 40207351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 4e-38; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 155 - 271
Target Start/End: Complemental strand, 47321387 - 47321271
Alignment:
Q  155 ttatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaa 254  Q
    ||||||||||||||||| ||||||| | ||| |||| ||||||||||||||||||| ||||  |||||||||||||||||| ||||||||||||||||||    
T  47321387 ttatactccctccgttttaaaatgagtgtcgttttagccaattgcacacagattaaggaattgaataaaatagtcaaatgtcatagcaattttactaaaa 47321288  T
Q  255 taaccttactttataag 271  Q
    |||||||||||||||||    
T  47321287 taaccttactttataag 47321271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 165 - 271
Target Start/End: Complemental strand, 45889795 - 45889689
Alignment:
Q  165 tccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttact 264  Q
    ||||||||||||||| | ||| |||| ||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  45889795 tccgtttcaaaatgagtgtcgttttagccaattgcacacatattaaggaatgaaataaagtagtcaaatgttatagcaattttactaaaataaccttact 45889696  T
Q  265 ttataag 271  Q
    |||||||    
T  45889695 ttataag 45889689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 158 - 271
Target Start/End: Complemental strand, 28116484 - 28116371
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataa 257  Q
    |||||| ||||||||||||||| | || |||||||||||||||||| |||||| ||||| |||||| ||||||||||| |||||||||||||||||||||    
T  28116484 tactccatccgtttcaaaatgagtgtcactttaaccaattgcacacggattaaggaatggaataaagtagtcaaatgtcatagcaattttactaaaataa 28116385  T
Q  258 ccttactttataag 271  Q
    ||||||||||||||    
T  28116384 ccttactttataag 28116371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 157 - 271
Target Start/End: Original strand, 17499629 - 17499743
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaata 256  Q
    |||||| |||||||| ||||||| | ||| ||||  ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  17499629 atactctctccgttttaaaatgagtgtcgttttagtcaattgcacacagattaatgaatgaaataaaatagtcaaatgtcataacaattttactaaaata 17499728  T
Q  257 accttactttataag 271  Q
    || ||||||||||||    
T  17499729 acattactttataag 17499743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 157 - 271
Target Start/End: Complemental strand, 55126737 - 55126623
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaata 256  Q
    ||||||| ||||||| ||||||||| ||| |||| |||||||||||  |||||| |||||||||||| ||||||||||| ||||||||||||||||||||    
T  55126737 atactccatccgttttaaaatgaatgtcgttttagccaattgcacattgattaaggaatgaaataaagtagtcaaatgtcatagcaattttactaaaata 55126638  T
Q  257 accttactttataag 271  Q
    |||||||||||||||    
T  55126637 accttactttataag 55126623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 158 - 271
Target Start/End: Complemental strand, 34124534 - 34124421
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataa 257  Q
    |||| ||||||||||||||||| | |||||||| |||||||||||||||||||  |||  |||||| ||||||||||| ||| |||||||||||||||||    
T  34124534 tacttcctccgtttcaaaatgagtgtcgctttagccaattgcacacagattaagaaattgaataaagtagtcaaatgtcataacaattttactaaaataa 34124435  T
Q  258 ccttactttataag 271  Q
    ||||||||||||||    
T  34124434 ccttactttataag 34124421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 165 - 271
Target Start/End: Complemental strand, 24259843 - 24259737
Alignment:
Q  165 tccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttact 264  Q
    ||||||| ||||||| | |||||||| ||||||||||| | ||||| |||||||||||| ||||||||||| ||| ||||||||||||||||||||||||    
T  24259843 tccgttttaaaatgagtgtcgctttatccaattgcacatatattaaggaatgaaataaagtagtcaaatgtcataacaattttactaaaataaccttact 24259744  T
Q  265 ttataag 271  Q
    |||||||    
T  24259743 ttataag 24259737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 151 - 249
Target Start/End: Original strand, 40345256 - 40345354
Alignment:
Q  151 tattttatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||| |||||||||||||||| ||||||||| |||||||| ||||||||||||| |||||||||||||||||| ||||||||||| ||| |||||||||    
T  40345256 tattatatactccctccgttttaaaatgaatgtcgctttagccaattgcacacaaattaatgaatgaaataaagtagtcaaatgtcatatcaattttac 40345354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 167 - 271
Target Start/End: Original strand, 4408099 - 4408203
Alignment:
Q  167 cgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttacttt 266  Q
    ||||||||||||||| |||||||||| ||||||||| | ||||| |||||||||||| ||||||| ||| ||| |||||||||||||||||||||||| |    
T  4408099 cgtttcaaaatgaatgtcgctttaactaattgcacataaattaaggaatgaaataaagtagtcaagtgtcataacaattttactaaaataaccttactat 4408198  T
Q  267 ataag 271  Q
    |||||    
T  4408199 ataag 4408203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 19282330 - 19282435
Alignment:
Q  165 tccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttact 264  Q
    ||||||| |||||||   |||||||| |||||||||||| |||||| ||||| |||||| ||||||||||| ||| ||||||||||||||||||||||||    
T  19282330 tccgttttaaaatgagcgtcgctttagccaattgcacacggattaaggaatggaataaagtagtcaaatgtcataacaattttactaaaataaccttact 19282429  T
Q  265 ttataa 270  Q
    ||||||    
T  19282430 ttataa 19282435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 158 - 271
Target Start/End: Original strand, 51434170 - 51434283
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataa 257  Q
    |||| ||||||||| ||||||||| |||||||||||||||||| | | ||||| ||||| |||||| ||||||||| | ||| |||||||| ||||||||    
T  51434170 tacttcctccgttttaaaatgaatgtcgctttaaccaattgcatatatattaaggaatggaataaagtagtcaaatttcataacaattttattaaaataa 51434269  T
Q  258 ccttactttataag 271  Q
    ||||||||||||||    
T  51434270 ccttactttataag 51434283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 156 - 271
Target Start/End: Complemental strand, 6462255 - 6462140
Alignment:
Q  156 tatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaat 255  Q
    |||||||| |||||||||||||||   ||| |||| |||||||||||||||||||  || | |||||| ||||||||| | |||||||||| ||||||||    
T  6462255 tatactccatccgtttcaaaatgagggtcgttttagccaattgcacacagattaagaaaagtaataaagtagtcaaatttcatagcaatttgactaaaat 6462156  T
Q  256 aaccttactttataag 271  Q
    ||||||||||||||||    
T  6462155 aaccttactttataag 6462140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 249
Target Start/End: Complemental strand, 37654651 - 37654560
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||||||||||||||||||| | ||| |||| ||||||||||||| ||||| |||||||||||| ||||||||||| |||||||||||||    
T  37654651 tactccctccgtttcaaaatgagtgtcgttttagccaattgcacacatattaaggaatgaaataaagtagtcaaatgtcatagcaattttac 37654560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 249
Target Start/End: Original strand, 52957706 - 52957797
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||| |||||||||||||||| | |||||||| ||||||||||||||||||| ||||| |||||| ||||||||||| |||||||||||||    
T  52957706 tactcactccgtttcaaaatgagtgtcgctttagccaattgcacacagattaaggaatggaataaagtagtcaaatgtcatagcaattttac 52957797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 34316461 - 34316384
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgt 235  Q
    ||||| |||||||||||||||| | || ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  34316461 tactcactccgtttcaaaatgagtgtcactttaaccaattgcacacagattaaggaatgaaataaaatagtcaaatgt 34316384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 155 - 248
Target Start/End: Complemental strand, 39985061 - 39984968
Alignment:
Q  155 ttatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaatttta 248  Q
    ||||||||||||||||||||||||| | |||||||| ||||||||| ||| ||||| ||||  |||||||||||||||||| ||||||||||||    
T  39985061 ttatactccctccgtttcaaaatgagtgtcgctttagccaattgcatacatattaaggaattgaataaaatagtcaaatgtcatagcaatttta 39984968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 157 - 271
Target Start/End: Complemental strand, 31941795 - 31941684
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaata 256  Q
    ||||||||||||||||||||||| | |||||||| |||||||||  || ||    ||||| |||||| ||||||||||| |||||||||||| |||||||    
T  31941795 atactccctccgtttcaaaatgagtgtcgctttagccaattgcatgcaaata---gaatggaataaagtagtcaaatgtcatagcaattttattaaaata 31941699  T
Q  257 accttactttataag 271  Q
    |||||||||||||||    
T  31941698 accttactttataag 31941684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 249
Target Start/End: Complemental strand, 1819803 - 1819712
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||| ||||||||| ||||||||| ||||||||  |||||| ||||||||||| |||||||||||| ||||||||||| |||||||||||||    
T  1819803 tacttcctccgttttaaaatgaatgtcgctttagtcaattgaacacagattaaagaatgaaataaagtagtcaaatgtcatagcaattttac 1819712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 271
Target Start/End: Complemental strand, 54234052 - 54233942
Alignment:
Q  161 tccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataacct 260  Q
    ||||||||||||||||||| | |||||||| ||||||||| ||| |||||  |||| |||||| || |||||| | ||| ||||||||||||||||| ||    
T  54234052 tccctccgtttcaaaatgagtgtcgctttagccaattgcatacaaattaagaaatggaataaagtactcaaatatcatatcaattttactaaaataagct 54233953  T
Q  261 tactttataag 271  Q
    |||||||||||    
T  54233952 tactttataag 54233942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 19878891 - 19878798
Alignment:
Q  156 tatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||||||||||||||||||||||| |||||||| |||||||| || ||||||| ||||| |||||| || ||||||||  ||||||||||||    
T  19878891 tatactccctccgtttcaaaatgaatgtcgctttagccaattgcgcagagattaaggaatggaataaagtaatcaaatgtcgtagcaattttac 19878798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 53814411 - 53814504
Alignment:
Q  156 tatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||||| ||||||| ||||||| | ||| |||||||||| ||||||| ||||| |||||||||||| ||||||||||| |||||||||||||    
T  53814411 tatactccatccgttttaaaatgagtgtcgttttaaccaatcgcacacatattaaggaatgaaataaagtagtcaaatgtcatagcaattttac 53814504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 44571780 - 44571872
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||||||  ||| ||||||| | || ||||||||||||||| ||| |||||||||||||||||||||||||||||| |||| ||||||||    
T  44571780 atactccctcttttttaaaatgagtgtctctttaaccaattgcaaacatattaatgaatgaaataaaatagtcaaatgtcatagtaattttac 44571872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 168 - 268
Target Start/End: Original strand, 55548143 - 55548243
Alignment:
Q  168 gtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttacttta 267  Q
    |||||||||||| ||||| |||||||||||| ||  | |  || |||||||||||||||||||||||||||| ||||||||||||||||  |||||||||    
T  55548143 gtttcaaaatgagtatcgttttaaccaattgtacctataacaaggaatgaaataaaatagtcaaatgttataacaattttactaaaatagtcttacttta 55548242  T
Q  268 t 268  Q
    |    
T  55548243 t 55548243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 249
Target Start/End: Complemental strand, 2493343 - 2493252
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||| ||||||||||||||| | ||| |||  ||||||||||||| ||||| |||||||||||| ||||||||||| |||||||||||||    
T  2493343 tactccatccgtttcaaaatgagtgtcgtttttgccaattgcacacatattaaggaatgaaataaagtagtcaaatgtcatagcaattttac 2493252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 249
Target Start/End: Complemental strand, 18430230 - 18430139
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||| ||||||||||||||||| | | |||||| ||||||||||||| ||||| |||||||||||| ||||||||||| ||| |||||||||    
T  18430230 tacttcctccgtttcaaaatgagtgttgctttagccaattgcacacatattaaggaatgaaataaagtagtcaaatgtcataacaattttac 18430139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 49080394 - 49080484
Alignment:
Q  159 actccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||||||||||||||| | | |||||||| ||||||||||||| ||||| |||| ||||||| ||||||||||| |||| ||||||||    
T  49080394 actccctccgtttcaaaataagtgtcgctttatccaattgcacacatattaaggaataaaataaagtagtcaaatgtcatagtaattttac 49080484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 249
Target Start/End: Complemental strand, 27653905 - 27653824
Alignment:
Q  168 gtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||||||||| | |||||||| ||||||||||||| ||||| ||||| |||||| ||||||||||| |||||||||||||    
T  27653905 gtttcaaaatgagtgtcgctttagccaattgcacacaaattaaggaatggaataaagtagtcaaatgtcatagcaattttac 27653824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 148 - 249
Target Start/End: Complemental strand, 42605823 - 42605722
Alignment:
Q  148 tgatattttatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaatttt 247  Q
    |||| ||| |||||| |||||||| |||||||   ||| ||||  |||||||||||||||||| |||| ||||||||||||||||||| |||||||||||    
T  42605823 tgatgtttaatactcactccgttttaaaatgagcgtcgttttagtcaattgcacacagattaaagaataaaataaaatagtcaaatgtcatagcaatttt 42605724  T
Q  248 ac 249  Q
    ||    
T  42605723 ac 42605722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 2728313 - 2728405
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||| ||||||||||||||| | |||||||| ||||||||||||| ||||| ||||  |||||| ||||||||||| ||| |||||||||    
T  2728313 atactccatccgtttcaaaatgagtgtcgctttagccaattgcacacatattaaggaattgaataaagtagtcaaatgtcataacaattttac 2728405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 162 - 249
Target Start/End: Complemental strand, 24941117 - 24941030
Alignment:
Q  162 ccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||||||||||||||| | ||| ||||||||||||||||||  |||| ||||| |||||| ||||||||||| ||| |||||||||    
T  24941117 ccctccgtttcaaaatgagtgtcgttttaaccaattgcacacatgttaaagaatggaataaagtagtcaaatgtcataacaattttac 24941030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 56556193 - 56556251
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaat 215  Q
    ||||||||||||||| ||||||| | |||||||||||||||||||||||||||| ||||    
T  56556193 atactccctccgttttaaaatgagtgtcgctttaaccaattgcacacagattaaggaat 56556251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 152 - 249
Target Start/End: Original strand, 38991673 - 38991770
Alignment:
Q  152 attttatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||||||| ||||||||| ||||||| | ||| ||||  ||||||||||||||||||  |||| |||||| |||| |||||| ||| |||||||||    
T  38991673 attttatacttcctccgttttaaaatgagtgtcgttttagtcaattgcacacagattaagaaatgtaataaagtagttaaatgtcataacaattttac 38991770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 249
Target Start/End: Complemental strand, 29370809 - 29370753
Alignment:
Q  193 caattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||||||||| ||||| |||||||||||| ||||||||||| |||||||||||||    
T  29370809 caattgcacacatattaaggaatgaaataaagtagtcaaatgtcatagcaattttac 29370753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 249
Target Start/End: Original strand, 29519448 - 29519532
Alignment:
Q  165 tccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||| ||||||| | ||| |||| |||||| |||||| ||||| |||||||||||||||||||||| | ||| |||||||||    
T  29519448 tccgttttaaaatgagtgtcgttttagccaattacacacatattaaggaatgaaataaaatagtcaaatatcataacaattttac 29519532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 249
Target Start/End: Original strand, 52847970 - 52848061
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||||||||||| ||||||| | | | |||| ||||||||| |||||||||  |||  |||||| ||||||||||| |||||||||||||    
T  52847970 tactccctccgttttaaaatgagtgttgttttagccaattgcatacagattaagaaattgaataaagtagtcaaatgtcatagcaattttac 52848061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 249
Target Start/End: Original strand, 56373491 - 56373582
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||| ||||||||||||||| | || ||||| ||||||| | ||| ||||| ||||| |||||| |||||||||||  ||||||||||||    
T  56373491 tactccatccgtttcaaaatgagtgtcactttagccaattgaagacatattaaggaatggaataaagtagtcaaatgtcgtagcaattttac 56373582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 260
Target Start/End: Original strand, 34534042 - 34534108
Alignment:
Q  194 aattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataacct 260  Q
    |||||||| |||||||| ||||  |||||| || |||||||| ||||||||||||||||||||||||    
T  34534042 aattgcactcagattaaggaattgaataaagtaatcaaatgtcatagcaattttactaaaataacct 34534108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 248
Target Start/End: Complemental strand, 50623325 - 50623235
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaatttta 248  Q
    |||||||||||||| ||||||| | ||| ||||  ||||| |||||| ||||| |||||||||| | ||||||||||| ||| ||||||||    
T  50623325 tactccctccgttttaaaatgagtgtcgttttagtcaattacacacatattaaggaatgaaatagagtagtcaaatgtcatatcaatttta 50623235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 158 - 249
Target Start/End: Complemental strand, 20448278 - 20448189
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||| ||| |||||||||||  | |||||||| ||||||||||||| ||||| ||||  |||||| |||| |||||| |||||||||||||    
T  20448278 tactctctctgtttcaaaatg--tgtcgctttagccaattgcacacatattaaggaattgaataaagtagttaaatgtcatagcaattttac 20448189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 158 - 226
Target Start/End: Complemental strand, 29840292 - 29840224
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaata 226  Q
    |||||||||||||||||||||| | ||| |||| ||||||||||||| ||||| ||||| ||| |||||    
T  29840292 tactccctccgtttcaaaatgagtgtcgttttacccaattgcacacaaattaaggaatggaatgaaata 29840224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 165 - 249
Target Start/End: Original strand, 40010795 - 40010879
Alignment:
Q  165 tccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||||||||||| | ||| ||||  | ||| |||||| ||||| ||||| |||||| ||||||||||| |||||||||||||    
T  40010795 tccgtttcaaaatgagtgtcgttttagtccattacacacatattaaggaatggaataaagtagtcaaatgtcatagcaattttac 40010879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 45043503 - 45043595
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||| ||| |||||||||| | | ||| ||||  ||||||||||||  |||| ||||| |||||| ||||||||||| |||||||||||||    
T  45043503 atactctctctgtttcaaaataagtgtcgttttagtcaattgcacacattttaaggaatgtaataaagtagtcaaatgtcatagcaattttac 45043595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 173 - 253
Target Start/End: Complemental strand, 49089689 - 49089609
Alignment:
Q  173 aaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaa 253  Q
    ||||||| | ||| ||||| |||||||||||| ||||| |||||||||||  ||||||||| | ||| |||||||||||||    
T  49089689 aaaatgagtgtcgttttaatcaattgcacacatattaaggaatgaaataatgtagtcaaatatcataacaattttactaaa 49089609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 54042097 - 54042189
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacaca-gattaatgaatgaaataaaatagtcaaatgttatagcaatttta 248  Q
    ||||||| ||||||| ||||||| | ||| |||| |||||||||||||  |||||  |||| ||||||||||||||||||  |||||||||||    
T  54042097 atactccatccgttttaaaatgagtgtcgttttagccaattgcacacataattaagaaatggaataaaatagtcaaatgtcgtagcaatttta 54042189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 40837367 - 40837294
Alignment:
Q  160 ctccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgt 235  Q
    |||| ||||||||||||||||| || |||||||||||| ||||| ||| || |||||||||||| |||||||||||    
T  40837367 ctccgtccgtttcaaaatgaatgtc-ctttaaccaattacacacggatcaa-gaatgaaataaagtagtcaaatgt 40837294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 249
Target Start/End: Original strand, 41920225 - 41920316
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||||||||||||||||| | | ||  |||| | ||||||||||| ||||| ||||| ||| || ||||| ||||| |||||||||||||    
T  41920225 tactccctccgtttcaaaataagtgtcattttagctaattgcacacatattaaagaatggaatcaagtagtcgaatgtaatagcaattttac 41920316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 248
Target Start/End: Complemental strand, 28734825 - 28734749
Alignment:
Q  172 caaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaatttta 248  Q
    |||||||| | |||||||||||||||||||| | ||||| ||||  |||||| ||||||||||| |||  |||||||    
T  28734825 caaaatgagtgtcgctttaaccaattgcacatatattaaagaattgaataaagtagtcaaatgtcataataatttta 28734749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 226
Target Start/End: Complemental strand, 30492957 - 30492889
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaata 226  Q
    |||||||||||||||||||||| | | | |||| ||||||||||||| ||||| ||||| ||| |||||    
T  30492957 tactccctccgtttcaaaatgagtgtggttttagccaattgcacacaaattaaggaatggaatgaaata 30492889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 155 - 226
Target Start/End: Original strand, 32140788 - 32140859
Alignment:
Q  155 ttatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaata 226  Q
    ||||| ||| ||||||||||||||| | ||| ||||  |||||||||||| ||||| ||||||||| |||||    
T  32140788 ttataatccatccgtttcaaaatgagtgtcgttttagtcaattgcacacaaattaaggaatgaaatcaaata 32140859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 248
Target Start/End: Complemental strand, 19930901 - 19930865
Alignment:
Q  212 gaatgaaataaaatagtcaaatgttatagcaatttta 248  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  19930901 gaatgaaataaaatagttaaatgtcatagcaatttta 19930865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 32140897 - 32140953
Alignment:
Q  154 tttatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaa 210  Q
    ||||||||| |||||||||||||||| | |   |||||||||||| |||||||||||    
T  32140897 tttatactctctccgtttcaaaatgagtgttaatttaaccaattgtacacagattaa 32140953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 3e-35; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 156 - 271
Target Start/End: Complemental strand, 8471501 - 8471386
Alignment:
Q  156 tatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaat 255  Q
    |||||||||| ||||||||||||| | |||||||| ||||||||||| |||||||  ||||||||||| ||||||||||| ||| |||||||||||||||    
T  8471501 tatactcccttcgtttcaaaatgagtgtcgctttagccaattgcacatagattaagaaatgaaataaagtagtcaaatgtcataccaattttactaaaat 8471402  T
Q  256 aaccttactttataag 271  Q
    ||||||||||||||||    
T  8471401 aaccttactttataag 8471386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 158 - 271
Target Start/End: Original strand, 34168124 - 34168237
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataa 257  Q
    |||||||||||||||||||||| | |||||||| |||||| ||||| |||||| ||||  |||||| ||||||||||| |||||||||||||||||||||    
T  34168124 tactccctccgtttcaaaatgagtgtcgctttagccaattacacacggattaaggaattgaataaagtagtcaaatgtcatagcaattttactaaaataa 34168223  T
Q  258 ccttactttataag 271  Q
    ||||||||||||||    
T  34168224 ccttactttataag 34168237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 158 - 267
Target Start/End: Original strand, 34461494 - 34461603
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataa 257  Q
    |||||| | ||||||||||||| | |||||||| ||||||| ||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||    
T  34461494 tactccttacgtttcaaaatgagtgtcgctttagccaattgtacacagattaaggaatgaaataaaatagtcaaatgtcataacaattttactaaaataa 34461593  T
Q  258 ccttacttta 267  Q
     |||||||||    
T  34461594 tcttacttta 34461603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 4760470 - 4760562
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||| ||||||| ||||||| | |||||||| ||||||||||| ||||||| |||||||||||| ||||||||||| |||||||||||||    
T  4760470 atactccatccgttttaaaatgagtgtcgctttagccaattgcacatagattaaggaatgaaataaagtagtcaaatgtcatagcaattttac 4760562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 13109195 - 13109116
Alignment:
Q  192 ccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttactttataag 271  Q
    ||||||||||||| ||||| ||||||||||||||| |||||||| |||| ||||||||||||||||||||| ||||||||    
T  13109195 ccaattgcacacaaattaaggaatgaaataaaatattcaaatgtcatagtaattttactaaaataaccttattttataag 13109116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 249
Target Start/End: Complemental strand, 39463498 - 39463407
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||||||||||||||||||| | |||||||| ||||||||||||| ||||| ||||| |||||| |||||||||||  ||||||||||||    
T  39463498 tactccctccgtttcaaaatgagtgtcgctttagccaattgcacacatattaaggaatggaataaagtagtcaaatgtcgtagcaattttac 39463407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 163 - 249
Target Start/End: Original strand, 9880418 - 9880504
Alignment:
Q  163 cctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||  |||| |||||| | ||||||||| |||||||||||||    
T  9880418 cctccgtttcaaaatgagtgtcgctttaaccaattgcacacagattaagaaatggaataaagtggtcaaatgtcatagcaattttac 9880504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 173 - 271
Target Start/End: Original strand, 14541673 - 14541771
Alignment:
Q  173 aaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttactttataag 271  Q
    ||||||| ||||  |||| ||||||||| |||||||||  |||| |||||| ||||||||||| ||| |||||||||||||||||||||||||||||||    
T  14541673 aaaatgagtatcattttagccaattgcatacagattaaataatggaataaagtagtcaaatgtcataacaattttactaaaataaccttactttataag 14541771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 193 - 271
Target Start/End: Complemental strand, 27416708 - 27416630
Alignment:
Q  193 caattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttactttataag 271  Q
    ||||||||| |||||||| ||||  |||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  27416708 caattgcacgcagattaaggaatataataaagtagtcaaatgtcatagcaattttactaaaataaccttactttataag 27416630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 157 - 264
Target Start/End: Complemental strand, 11168925 - 11168818
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaata 256  Q
    ||||||||||||||||||||||| | |||||||| ||| || |||||||||||| ||||| ||| |  ||||||||| | |||||||||||||| |||||    
T  11168925 atactccctccgtttcaaaatgagtgtcgctttagccattttcacacagattaaggaatgcaatcatttagtcaaatatcatagcaattttactgaaata 11168826  T
Q  257 accttact 264  Q
     |||||||    
T  11168825 gccttact 11168818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 173 - 265
Target Start/End: Original strand, 18673026 - 18673118
Alignment:
Q  173 aaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttactt 265  Q
    ||||||| | ||||| || |||||| |||||| |||||  ||||||||||| ||||||||||| ||| |||||||||||||||||||||||||    
T  18673026 aaaatgagtgtcgctctagccaattacacacaaattaagaaatgaaataaagtagtcaaatgtcataacaattttactaaaataaccttactt 18673118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 157 - 249
Target Start/End: Complemental strand, 43448958 - 43448866
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||| ||||||||||||||  | ||||||||  ||||| |||||| |||||||||||||||||| ||||||||||| ||| |||||||||    
T  43448958 atactccatccgtttcaaaatgggtgtcgctttagtcaattacacacatattaatgaatgaaataaagtagtcaaatgtcatatcaattttac 43448866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 164 - 249
Target Start/End: Complemental strand, 17921192 - 17921107
Alignment:
Q  164 ctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||||||||||| ||| | |||| | ||||||||||||| ||||| ||||  |||||||||||||||||| |||||||||||||    
T  17921192 ctccgtttcaaaattaatgttgcttaagccaattgcacacatattaaggaattgaataaaatagtcaaatgtcatagcaattttac 17921107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 4989707 - 4989630
Alignment:
Q  170 ttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaatttt 247  Q
    |||||||||| | |||||||||||||||||| ||| ||||| ||||| |||||| ||||||||| | |||||||||||    
T  4989707 ttcaaaatgagtttcgctttaaccaattgcatacatattaaagaatggaataaagtagtcaaatatcatagcaatttt 4989630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 249
Target Start/End: Original strand, 39698588 - 39698669
Alignment:
Q  168 gtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||| ||||||| | || |||||  |||||||||||| ||||| | |||||||||| |||||||||||||||||||||||||    
T  39698588 gttttaaaatgagtgtctctttaggcaattgcacacatattaaggtatgaaataaagtagtcaaatgttatagcaattttac 39698669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 38328967 - 38329035
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaata 226  Q
    |||||||||||||||||||||| | ||||||||  |||||||||||||||||| ||||| ||| |||||    
T  38328967 tactccctccgtttcaaaatgagtttcgctttagtcaattgcacacagattaaggaatggaatgaaata 38329035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 32271713 - 32271638
Alignment:
Q  194 aattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttactttataag 271  Q
    ||||||||||||||  | |||||||||||| | | ||||| ||||||||||||||||||||||| ||||||| |||||    
T  32271713 aattgcacacagat--aggaatgaaataaagttgacaaatcttatagcaattttactaaaataatcttacttgataag 32271638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 173 - 253
Target Start/End: Original strand, 31693546 - 31693626
Alignment:
Q  173 aaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaa 253  Q
    ||||||||| |||||||| |||| ||||||||  |||| ||||  |||||| ||||||||||| ||| |||||||||||||    
T  31693546 aaaatgaatgtcgctttagccaactgcacacatgttaaggaatataataaagtagtcaaatgtcataacaattttactaaa 31693626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 249
Target Start/End: Original strand, 31899171 - 31899251
Alignment:
Q  169 tttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||||||| | |||||||| ||||||||||| | ||||| |||||||||||| | ||| ||||| ||| |||||||||    
T  31899171 tttcaaaatgagtgtcgctttagccaattgcacatatattaaggaatgaaataaagttgtcgaatgtcataacaattttac 31899251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 158 - 226
Target Start/End: Complemental strand, 36915605 - 36915537
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaata 226  Q
    |||||||||||||| ||||||| | ||| |||||||||||||| ||||||||| ||||| ||| |||||    
T  36915605 tactccctccgttttaaaatgagtgtcgttttaaccaattgcatacagattaaggaatggaatgaaata 36915537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 165 - 249
Target Start/End: Complemental strand, 40228808 - 40228724
Alignment:
Q  165 tccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||||||||||| | ||  ||||  |||||||||| | ||||| |||||||||||| ||||||||||| ||| |||||||||    
T  40228808 tccgtttcaaaatgagtgtcattttagtcaattgcacatatattaaggaatgaaataaagtagtcaaatgtcataacaattttac 40228724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 193 - 249
Target Start/End: Original strand, 43084574 - 43084630
Alignment:
Q  193 caattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||||||||| ||||| |||||||||||| ||||||||||| |||| ||||||||    
T  43084574 caattgcacacatattaaggaatgaaataaagtagtcaaatgtcatagtaattttac 43084630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 249
Target Start/End: Complemental strand, 44713775 - 44713684
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||| ||||| |||||||||| || ||  ||||  ||| |||||| ||||||| |||||||||||| ||||||||||| ||||||| |||||    
T  44713775 tacttcctccatttcaaaatggatgtccttttagtcaactgcacatagattaaggaatgaaataaagtagtcaaatgtcatagcaactttac 44713684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 2803158 - 2803235
Alignment:
Q  149 gatattttatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaata 226  Q
    ||||||||||||||  ||||||||||||| | | |||||||||| ||||||||||| |||   ||||||||| |||||    
T  2803158 gatattttatactctatccgtttcaaaataagtgtcgctttaactaattgcacacaaattttggaatgaaatgaaata 2803235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 249
Target Start/End: Original strand, 29025667 - 29025752
Alignment:
Q  164 ctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||| ||||||||| | ||| ||||| |||||||||||| ||||| ||||  |||||| ||  ||||||| |||||||||||||    
T  29025667 ctccgtatcaaaatgagtgtcgttttaatcaattgcacacatattaaggaatagaataaagtacacaaatgtcatagcaattttac 29025752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 226
Target Start/End: Original strand, 32326644 - 32326705
Alignment:
Q  165 tccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaata 226  Q
    ||||||| ||||||| | ||||||||  |||||||||||||||||| ||||||||| |||||    
T  32326644 tccgttttaaaatgagtgtcgctttagtcaattgcacacagattaaggaatgaaatgaaata 32326705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 4530107 - 4530055
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaa 210  Q
    |||||| ||||||||||||||| | ||| |||| |||||||||||||||||||    
T  4530107 tactccatccgtttcaaaatgagtgtcgttttagccaattgcacacagattaa 4530055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 8106800 - 8106868
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaata 226  Q
    |||||||||| ||| ||||||| ||||| ||||  |||||||||||| ||||| ||||||||| |||||    
T  8106800 tactccctccattttaaaatgagtatcgatttagtcaattgcacacaaattaaagaatgaaatgaaata 8106868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 9022636 - 9022584
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaa 210  Q
    |||||||||||||| ||||||| | ||| |||| |||||||||||||||||||    
T  9022636 tactccctccgttttaaaatgagtgtcgttttagccaattgcacacagattaa 9022584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 9304545 - 9304637
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||| ||||||||| ||||||| | ||  |||| ||||||||||||| | |||  |||  ||||||||||| |||||| |||||||||||||    
T  9304545 atactacctccgttttaaaatgagtgtcattttagccaattgcacacataataagaaattgaataaaatagttaaatgtcatagcaattttac 9304637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 22601371 - 22601307
Alignment:
Q  162 ccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaata 226  Q
    ||||| |||||||||||||| ||| |||| ||||||| ||||| |||||||||| |||| |||||    
T  22601371 ccctctgtttcaaaatgaatgtcgatttagccaattgtacacatattaatgaataaaatgaaata 22601307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Original strand, 22699337 - 22699374
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaa 195  Q
    |||||||||||||||||||||||| ||| |||||||||    
T  22699337 tactccctccgtttcaaaatgaatgtcgttttaaccaa 22699374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 41415073 - 41415004
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaata 226  Q
    ||||||| ||||||| ||||| ||| ||| |||| ||||||||||| | ||||| ||||||||| |||||    
T  41415073 atactccatccgttttaaaataaatgtcgttttagccaattgcacatatattaaggaatgaaatgaaata 41415004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 8382399 - 8382467
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaata 226  Q
    |||||| ||||||| ||||||| | ||| |||| | ||||||||| | ||||| |||||||||||||||    
T  8382399 tactccatccgttttaaaatgagtgtcgttttagctaattgcacataaattaaagaatgaaataaaata 8382467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 32661532 - 32661468
Alignment:
Q  162 ccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaata 226  Q
    ||||| |||||||||||||| |   ||||  |||||||||||| ||||| |||||||||||||||    
T  32661532 ccctctgtttcaaaatgaatgtgattttagtcaattgcacacaaattaaggaatgaaataaaata 32661468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 246
Target Start/End: Complemental strand, 43595021 - 43594964
Alignment:
Q  187 tttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattt 246  Q
    |||||||||||  ||||| ||||| ||||| ||||||||||| |||||||||| ||||||    
T  43595021 tttaaccaatt--acacatattaaagaatggaataaaatagtaaaatgttataacaattt 43594964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 1e-34; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 161 - 271
Target Start/End: Original strand, 2988523 - 2988633
Alignment:
Q  161 tccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataacct 260  Q
    ||||||||||||||||||| | |||||||| |||||||||||  |||||| ||||| |||||| ||||||||||| ||||||||||||||||||||||||    
T  2988523 tccctccgtttcaaaatgagtgtcgctttagccaattgcacatggattaaggaatggaataaagtagtcaaatgtcatagcaattttactaaaataacct 2988622  T
Q  261 tactttataag 271  Q
    |||||||||||    
T  2988623 tactttataag 2988633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 153 - 271
Target Start/End: Complemental strand, 54261663 - 54261545
Alignment:
Q  153 ttttatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaa 252  Q
    ||||||||||||||||||||||||||| | |||||||| |||||| ||||||||||||  |||  |||||| ||||||||||| ||| ||||||||||||    
T  54261663 ttttatactccctccgtttcaaaatgagtgtcgctttagccaattacacacagattaagaaattgaataaagtagtcaaatgtcataacaattttactaa 54261564  T
Q  253 aataaccttactttataag 271  Q
    |||||||||||||||||||    
T  54261563 aataaccttactttataag 54261545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 158 - 271
Target Start/End: Original strand, 20512406 - 20512519
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataa 257  Q
    |||||||||||||| ||||||| | ||||||||  ||||||||||||||||||  |||  |||||||||||||||||| |||||||||||||||||||||    
T  20512406 tactccctccgttttaaaatgagtgtcgctttagtcaattgcacacagattaagaaattgaataaaatagtcaaatgtcatagcaattttactaaaataa 20512505  T
Q  258 ccttactttataag 271  Q
    ||||||||||||||    
T  20512506 ccttactttataag 20512519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 158 - 270
Target Start/End: Complemental strand, 51381967 - 51381855
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataa 257  Q
    |||||| | ||||||||||||| | ||||||||  |||||||||||||||||| |||||||||||||||||||||| | |||||| ||||||||||||||    
T  51381967 tactccattcgtttcaaaatgagtgtcgctttagtcaattgcacacagattaaggaatgaaataaaatagtcaaatatcatagcagttttactaaaataa 51381868  T
Q  258 ccttactttataa 270  Q
    |||||||||||||    
T  51381867 ccttactttataa 51381855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 157 - 271
Target Start/End: Original strand, 54933114 - 54933228
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaata 256  Q
    ||||||| ||||||| ||||||| | |||||||| ||||||||||| | ||||| |||||||||||| ||||||||||| ||| ||||||||||||||||    
T  54933114 atactccatccgttttaaaatgagtgtcgctttagccaattgcacatatattaaggaatgaaataaagtagtcaaatgtcataacaattttactaaaata 54933213  T
Q  257 accttactttataag 271  Q
    |||||||||||||||    
T  54933214 accttactttataag 54933228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 158 - 271
Target Start/End: Original strand, 32303815 - 32303928
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataa 257  Q
    |||||| |||| |||||||||| | ||| |||||| ||| | ||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||    
T  32303815 tactccatccgcttcaaaatgagtgtcgttttaactaatcgtacacagattaaggaatgaaataaagtagtcaaatgtcatagcaattttactaaaataa 32303914  T
Q  258 ccttactttataag 271  Q
    ||||||||||||||    
T  32303915 ccttactttataag 32303928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 161 - 271
Target Start/End: Original strand, 43687796 - 43687906
Alignment:
Q  161 tccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataacct 260  Q
    ||||||||||||||||| | | ||| ||||  ||||||||||| |||||||||||| |||||| ||||||||||| ||| ||||||||||||||||||||    
T  43687796 tccctccgtttcaaaataagtgtcgttttagtcaattgcacacggattaatgaatggaataaagtagtcaaatgtcataacaattttactaaaataacct 43687895  T
Q  261 tactttataag 271  Q
    |||||||||||    
T  43687896 tactttataag 43687906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 168 - 269
Target Start/End: Complemental strand, 36541724 - 36541623
Alignment:
Q  168 gtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttacttta 267  Q
    |||| ||||||| | ||||||||||||||| |||| | ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  36541724 gttttaaaatgagtgtcgctttaaccaattacacatatattaaggaatgaaataaaatagtcaaatgttatagcaattttactaaaattaccttgcttta 36541625  T
Q  268 ta 269  Q
    ||    
T  36541624 ta 36541623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 158 - 267
Target Start/End: Original strand, 25722371 - 25722480
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataa 257  Q
    ||||| ||| |||||||||| | ||||| |||| |||||||||||||||||||  |||| |||||| ||||||||||| ||| |||||||||||||||||    
T  25722371 tactctctctgtttcaaaataagtatcgatttagccaattgcacacagattaagaaatggaataaagtagtcaaatgtcataacaattttactaaaataa 25722470  T
Q  258 ccttacttta 267  Q
    ||||||||||    
T  25722471 ccttacttta 25722480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 157 - 249
Target Start/End: Complemental strand, 51398252 - 51398160
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||||||||||||||||||| | |||||||| |||||||||||||||||||  ||||||||||| || |||||||||||| |||||||||    
T  51398252 atactccctccgtttcaaaatgagtgtcgctttagccaattgcacacagattaagaaatgaaataaagtaatcaaatgttataacaattttac 51398160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 159 - 248
Target Start/End: Original strand, 31853472 - 31853561
Alignment:
Q  159 actccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaatttta 248  Q
    ||||||||| ||| ||||||||| |||||||||||||||||||  ||||||| |||||||||||||||||||||||| ||| ||||||||    
T  31853472 actccctccattttaaaatgaatgtcgctttaaccaattgcacttagattaaagaatgaaataaaatagtcaaatgtcataacaatttta 31853561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 33193939 - 33194031
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||||||| |||||||||||| | ||||||||  |||||||||||||||||| |||||||||||| ||||||||||| ||| |||||||||    
T  33193939 atactccctcagtttcaaaatgagtgtcgctttagtcaattgcacacagattaaggaatgaaataaagtagtcaaatgtcataacaattttac 33194031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 35557661 - 35557753
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||||||||||||||||| ||| ||| |||| ||| |||||||||||||||||||| ||||||| || |||||||| |||||||||||||    
T  35557661 atactccctccgtttcaaaataaatgtcgttttagccatttgcacacagattaatgaattaaataaagtaatcaaatgtcatagcaattttac 35557753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 163 - 271
Target Start/End: Complemental strand, 43169572 - 43169464
Alignment:
Q  163 cctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataacctta 262  Q
    ||||| ||||||||| | | ||| ||||  ||||| |||| ||||||| |||||||||||| ||||||||||| || ||| |||||||||||||||||||    
T  43169572 cctccatttcaaaattagtgtcgttttagtcaattacacaaagattaaggaatgaaataaagtagtcaaatgtcattgcagttttactaaaataacctta 43169473  T
Q  263 ctttataag 271  Q
    |||||||||    
T  43169472 ctttataag 43169464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 45213630 - 45213722
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||||||  ||| ||||||| | |||||||| ||||||||||||| ||||| |||||||||||| ||||||||||| |||||||||||||    
T  45213630 atactccctctattttaaaatgagtgtcgctttagccaattgcacacatattaaggaatgaaataaagtagtcaaatgtcatagcaattttac 45213722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 249
Target Start/End: Complemental strand, 2458249 - 2458158
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||||||||||||||||||| | || ||||| ||||||||||||| ||||| ||||| |||||| |||| |||||| |||||||||||||    
T  2458249 tactccctccgtttcaaaatgagtgtcactttagccaattgcacacatattaaggaatgcaataaagtagtaaaatgtcatagcaattttac 2458158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 249
Target Start/End: Original strand, 47895253 - 47895344
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||| ||||||||| ||||||| | |||||||| ||||||||||||| ||||| |||||||||||| |||||| |||| |||||||||||||    
T  47895253 tacttcctccgttttaaaatgagtgtcgctttagccaattgcacacatattaaggaatgaaataaagtagtcatatgtcatagcaattttac 47895344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 165 - 269
Target Start/End: Complemental strand, 44645575 - 44645470
Alignment:
Q  165 tccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaat-aaccttac 263  Q
    ||||||||||||| ||| ||| |||| | |||| |||||| ||||| |||||||||||| ||||||||| | ||||||||||| ||||||| ||||||||    
T  44645575 tccgtttcaaaataaatgtcgttttagctaattacacacatattaaagaatgaaataaagtagtcaaatatcatagcaattttgctaaaataaaccttac 44645476  T
Q  264 tttata 269  Q
    ||||||    
T  44645475 tttata 44645470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 41287404 - 41287496
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||||||||||||||||||| | |||||||| |||||| |||||| ||||| || ||| ||||| | ||||||||| |||||||||||||    
T  41287404 atactccctccgtttcaaaatgagtgtcgctttagccaattacacacatattaaggattgagataaagtggtcaaatgtcatagcaattttac 41287496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 249
Target Start/End: Original strand, 3152716 - 3152807
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||||| |||| ||||||| | ||| |||||||||||||||||| ||||| |||||||||||| |||||| |||| ||| |||||||||    
T  3152716 tactccctctgttttaaaatgagtgtcgttttaaccaattgcacacatattaaggaatgaaataaagtagtcagatgtcataacaattttac 3152807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 249
Target Start/End: Complemental strand, 41850622 - 41850531
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||| ||||||||||||||| |  ||||||| | ||||||||||| ||||| |||||||||||| ||||||||||| ||| |||||||||    
T  41850622 tactccatccgtttcaaaatgagtggcgctttagctaattgcacacatattaaggaatgaaataaagtagtcaaatgtcataacaattttac 41850531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 267
Target Start/End: Original strand, 52201830 - 52201945
Alignment:
Q  152 attttatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttacta 251  Q
    ||||||||||| |||| ||| ||||||  | ||| ||||  ||||||||||| |||||| ||||  ||||||||||| |||||| |||  ||||||||||    
T  52201830 attttatactctctccattttaaaatgcgtgtcgttttagtcaattgcacacggattaaggaatagaataaaatagttaaatgtcataataattttacta 52201929  T
Q  252 aaataaccttacttta 267  Q
    ||||||||||||||||    
T  52201930 aaataaccttacttta 52201945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 249
Target Start/End: Original strand, 53200590 - 53200681
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||||||||||||||||||| |  | |||||  ||||| |||| ||||||| |||||||||||| ||||||||||| |||||||||||||    
T  53200590 tactccctccgtttcaaaatgagtgccactttagtcaattacacaaagattaaagaatgaaataaagtagtcaaatgtcatagcaattttac 53200681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 247
Target Start/End: Complemental strand, 49471016 - 49470926
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaatttt 247  Q
    |||||| |||||||| ||||||| ||||| |||||  ||||||||||| ||||| ||||  |||||||||||||||||| |||||||||||    
T  49471016 atactctctccgttttaaaatgagtatcgttttaaataattgcacacaaattaaagaattgaataaaatagtcaaatgtcatagcaatttt 49470926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 158 - 271
Target Start/End: Complemental strand, 53560907 - 53560794
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataa 257  Q
    ||||| |||||||| ||||| | | ||| |||| |||||| || ||| ||||| |||| ||||||| |||| |||||| |||  ||||||||||||||||    
T  53560907 tactctctccgttttaaaataagtgtcgttttagccaattacatacatattaaggaataaaataaagtagttaaatgtcataataattttactaaaataa 53560808  T
Q  258 ccttactttataag 271  Q
    ||||||||||||||    
T  53560807 ccttactttataag 53560794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 44648322 - 44648390
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaata 226  Q
    |||||||||||||||||||||| | ||| |||| ||||||||||||||||||| ||||||||| |||||    
T  44648322 tactccctccgtttcaaaatgagtgtcgttttagccaattgcacacagattaaggaatgaaatgaaata 44648390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 264
Target Start/End: Original strand, 6937830 - 6937934
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataa 257  Q
    |||||||||||||||||||||||| |||||||| ||| ||   |||||||||| ||||| ||| |  ||||||||| | |||||||||||||| |||||     
T  6937830 tactccctccgtttcaaaatgaatgtcgctttagccattt--tcacagattaaggaatgcaatcatttagtcaaatatcatagcaattttactgaaatag 6937927  T
Q  258 ccttact 264  Q
    |||||||    
T  6937928 ccttact 6937934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 271
Target Start/End: Original strand, 42006978 - 42007085
Alignment:
Q  164 ctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttac 263  Q
    |||| ||| ||||||| | ||| |||| ||||||||| |  |||||| ||||  ||||||||||||| |||| ||||||||||| ||||||||||||||     
T  42006978 ctccattttaaaatgagtgtcgatttagccaattgcatatggattaaagaatagaataaaatagtcagatgtcatagcaatttttctaaaataaccttat 42007077  T
Q  264 tttataag 271  Q
    ||||||||    
T  42007078 tttataag 42007085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 23525224 - 23525316
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||| |||||||||||| |||| | ||| |||| ||||||||||||| ||||| ||| | |||||| ||||||||||| ||| |||||||||    
T  23525224 atacttcctccgtttcaatatgagtgtcgttttagccaattgcacacatattaaggaagggaataaagtagtcaaatgtcataacaattttac 23525316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 38016607 - 38016524
Alignment:
Q  166 ccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||| ||||||| |  |||||||| ||||| |||||| ||||| |||||||||||| ||||||||||| |||| ||||||||    
T  38016607 ccgtttaaaaatgagtcccgctttaatcaattacacacatattaaggaatgaaataaagtagtcaaatgtcatagtaattttac 38016524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 249
Target Start/End: Complemental strand, 38364032 - 38363941
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||| |||||||| ||||||| | ||| |||| ||||||||| |||||||||  |||| ||||||  |||||||||| |||||||||||||    
T  38364032 tactctctccgttttaaaatgagtgtcgttttagccaattgcatacagattaaccaatggaataaagcagtcaaatgtcatagcaattttac 38363941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 249
Target Start/End: Complemental strand, 47138206 - 47138115
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||| ||||||||||||||| | || |||||  |||||||||||| |||||  |||  |||||| ||||||||||| |||||||||||||    
T  47138206 tactccatccgtttcaaaatgagtgtcactttagtcaattgcacacatattaaataattgaataaagtagtcaaatgtcatagcaattttac 47138115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 248
Target Start/End: Complemental strand, 51482177 - 51482086
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgtta-tagcaatttta 248  Q
    |||||| || |||| ||||||| | ||| ||||| ||||| |||||||||||| |||||||||||| ||||||||| ||| |||||||||||    
T  51482177 tactccttctgttttaaaatgagtgtcgttttaaacaattacacacagattaaggaatgaaataaagtagtcaaatattagtagcaatttta 51482086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 249
Target Start/End: Original strand, 30426265 - 30426323
Alignment:
Q  191 accaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||||||||||||||||| ||||| |||| | ||||||||||| |||||||||||||    
T  30426265 accaattgcacacagattaaggaatggaatatagtagtcaaatgtcatagcaattttac 30426323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 248
Target Start/End: Original strand, 33024210 - 33024299
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaatttta 248  Q
    |||||||||||||||||||||||||| | |||| ||||||||||||| ||||| ||||  |||||| ||||| ||| |  |||||||||||    
T  33024210 tactccctccgtttcaaaatgaatat-gttttagccaattgcacacaaattaaggaattgaataaagtagtcgaatatcgtagcaatttta 33024299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 271
Target Start/End: Original strand, 647504 - 647617
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataa 257  Q
    ||||||||| |||||||||| | | ||| |||| |||||||||||||||||||  |||||||| ||||| |||   | |||| || |||||||||| |      
T  647504 tactccctcggtttcaaaataagtgtcgttttacccaattgcacacagattaagaaatgaaatgaaataatcattagatataacagttttactaaactgc 647603  T
Q  258 ccttactttataag 271  Q
    ||||||||||||||    
T  647604 ccttactttataag 647617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 31290886 - 31290954
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaata 226  Q
    |||||||||||||| ||||||| | ||| |||| |||||| |||||||||||| ||||||||| |||||    
T  31290886 tactccctccgttttaaaatgagtgtcgttttagccaattacacacagattaaggaatgaaatgaaata 31290954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 249
Target Start/End: Complemental strand, 30431360 - 30431270
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||||||||||| ||||||| | ||  |||| | | ||||||| ||||||| |||||||||||| ||||||||||| ||| |||||||||    
T  30431360 tactccctccgttttaaaatgagtgtcattttagc-agttgcacatagattaaggaatgaaataaagtagtcaaatgtcataacaattttac 30431270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 215
Target Start/End: Complemental strand, 44854556 - 44854497
Alignment:
Q  156 tatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaat 215  Q
    |||||||| ||||||||||||||| | ||| |||| ||||||||||| ||||||||||||    
T  44854556 tatactccatccgtttcaaaatgattgtcgttttagccaattgcacatagattaatgaat 44854497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 19373827 - 19373774
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaa 210  Q
    ||||||| ||||| ||||||||||| ||| |||| |||||||||||||||||||    
T  19373827 atactccttccgtctcaaaatgaatgtcgttttagccaattgcacacagattaa 19373774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 271
Target Start/End: Complemental strand, 25061934 - 25061821
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataa 257  Q
    |||||| ||||||| ||||||| | ||| |||| || |||||||||| ||||| ||||||||| ||||| |||   |  ||| || |||||||||| ||     
T  25061934 tactccatccgtttaaaaatgagtgtcgttttagccgattgcacacatattaaggaatgaaatgaaataatcattagacataacacttttactaaactac 25061835  T
Q  258 ccttactttataag 271  Q
    ||||||||||||||    
T  25061834 ccttactttataag 25061821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 249
Target Start/End: Complemental strand, 44676456 - 44676371
Alignment:
Q  164 ctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||||||||||||| | | | |||| |||||| |||||| ||||| ||||  |||||| |||| |||||| |||||||||||||    
T  44676456 ctccgtttcaaaatgagtgttgttttagccaattacacacatattaaggaatagaataaagtagttaaatgtcatagcaattttac 44676371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 226
Target Start/End: Complemental strand, 16240812 - 16240740
Alignment:
Q  154 tttatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaata 226  Q
    |||||||||| ||||||||||||||| | ||| |||| || |||||||||| ||||  ||||||||| |||||    
T  16240812 tttatactccatccgtttcaaaatgagtgtcgttttagcctattgcacacaaattagggaatgaaatgaaata 16240740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 226
Target Start/End: Complemental strand, 45095771 - 45095703
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaata 226  Q
    |||||||||||||||||||||| | |||||||| | |||||||| || ||||| ||||| ||| |||||    
T  45095771 tactccctccgtttcaaaatgattgtcgctttagctaattgcacgcatattaaggaatggaatgaaata 45095703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 271
Target Start/End: Original strand, 2567931 - 2568037
Alignment:
Q  165 tccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttact 264  Q
    ||||||| ||||||||| ||| |||| ||||||||||| ||||||| ||||  ||| ||||| |||   | |||| || |||||| |||||  |||||||    
T  2567931 tccgttttaaaatgaatgtcgttttagccaattgcacatagattaaggaattgaatgaaataatcattagatataacacttttacaaaaatgtccttact 2568030  T
Q  265 ttataag 271  Q
    |||||||    
T  2568031 ttataag 2568037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 167 - 249
Target Start/End: Complemental strand, 39359152 - 39359070
Alignment:
Q  167 cgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||||||||| | ||| ||||  |||||| | | | ||||| |||||||||||| ||||||||||| ||| |||||||||    
T  39359152 cgtttcaaaatgagtgtcgttttagtcaattgtatataaattaaggaatgaaataaagtagtcaaatgtcataacaattttac 39359070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 249
Target Start/End: Complemental strand, 45567030 - 45566949
Alignment:
Q  165 tccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||| ||||||| | ||  |||| ||||||||||| |||||||   ||| |||||| ||||||||||| |||||||||||||    
T  45567030 tccgttttaaaatgagtgtcattttagccaattgcacatagattaa---atgtaataaagtagtcaaatgtcatagcaattttac 45566949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 249
Target Start/End: Original strand, 36729691 - 36729772
Alignment:
Q  168 gtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||||||||   ||| |||| ||||||||||||| |||||  |||| |||||| ||||||||| | ||| |||||||||    
T  36729691 gtttcaaaatgagcgtcgttttagccaattgcacacatattaagtaatggaataaagtagtcaaatatcataacaattttac 36729772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 52222757 - 52222814
Alignment:
Q  153 ttttatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaa 210  Q
    |||| |||||||||||||||||||| | | ||| |||| |||||||||||| ||||||    
T  52222757 ttttttactccctccgtttcaaaattagtgtcgttttagccaattgcacacggattaa 52222814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 226
Target Start/End: Complemental strand, 4392136 - 4392068
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaata 226  Q
    |||||||||||||||||||||| | ||| |||  ||||||||| ||| |||||  |||||||| |||||    
T  4392136 tactccctccgtttcaaaatgagtgtcgttttggccaattgcatacaaattaagaaatgaaatgaaata 4392068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 202
Target Start/End: Original strand, 43736783 - 43736827
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcaca 202  Q
    |||||| ||||||||||||||| | |||||||| |||||||||||    
T  43736783 tactccatccgtttcaaaatgagtgtcgctttagccaattgcaca 43736827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 1e-34; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 157 - 271
Target Start/End: Complemental strand, 2459247 - 2459133
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaata 256  Q
    ||||||||||||||||||||||| | |||||||| |||||||||||||||||||  ||| |||| || ||||||||||| ||| ||||||||||||||||    
T  2459247 atactccctccgtttcaaaatgagtgtcgctttagccaattgcacacagattaagaaattaaatgaagtagtcaaatgtcataacaattttactaaaata 2459148  T
Q  257 accttactttataag 271  Q
    |||||||||||||||    
T  2459147 accttactttataag 2459133  T

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Target: chr1; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 161 - 271
Target Start/End: Original strand, 42650164 - 42650274
Alignment:
Q  161 tccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataacct 260  Q
    ||||||| ||||||||||||| |||||||| ||||||||||||||||||| || ||||||||| || |||||||| ||||||||||||||||||||||||    
T  42650164 tccctccctttcaaaatgaatgtcgctttagccaattgcacacagattaaagactgaaataaagtaatcaaatgtcatagcaattttactaaaataacct 42650263  T
Q  261 tactttataag 271  Q
    || ||||||||    
T  42650264 tagtttataag 42650274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 49468620 - 49468712
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||||||| ||||||||||| | |||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  49468620 atactccctccatttcaaaatgagtgtcgctttagccaattgcacacagattaaggaatgaaataaaatagtcaaatgtcatagcaattttac 49468712  T

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Target: chr1; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 157 - 271
Target Start/End: Complemental strand, 49895023 - 49894909
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaata 256  Q
    ||||||| ||| ||| ||||||| | ||| |||  ||||||||||||||||||| ||||| |||||||||||||||||| ||| ||||||||||||||||    
T  49895023 atactccatccattttaaaatgagtgtcgttttggccaattgcacacagattaaggaatggaataaaatagtcaaatgtcataacaattttactaaaata 49894924  T
Q  257 accttactttataag 271  Q
    |||||||||||||||    
T  49894923 accttactttataag 49894909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 158 - 271
Target Start/End: Complemental strand, 22665177 - 22665064
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataa 257  Q
    ||||||| |||||| ||||||| | ||||||||  |||||||||||||||||| ||||| |||||| ||||||||| | ||||||||||||||||| |||    
T  22665177 tactcccaccgttttaaaatgagtgtcgctttagtcaattgcacacagattaacgaatggaataaagtagtcaaatatcatagcaattttactaaactaa 22665078  T
Q  258 ccttactttataag 271  Q
    ||||||||||||||    
T  22665077 ccttactttataag 22665064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 158 - 271
Target Start/End: Original strand, 28200134 - 28200247
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataa 257  Q
    |||||| ||||||| ||||||| | |||||||| |||||||||||||||||||  |||  |||||| | ||||||||| |||||||||||||||||||||    
T  28200134 tactccttccgttttaaaatgagtgtcgctttagccaattgcacacagattaagaaattgaataaagttgtcaaatgtcatagcaattttactaaaataa 28200233  T
Q  258 ccttactttataag 271  Q
    ||||||||||||||    
T  28200234 ccttactttataag 28200247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 163 - 271
Target Start/End: Original strand, 254828 - 254936
Alignment:
Q  163 cctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataacctta 262  Q
    ||||||||||||||||| | ||||||||  ||||| ||||||||||||  |||||| |||| ||||||||||| ||||||||||||||||||||||| ||    
T  254828 cctccgtttcaaaatgagtgtcgctttagtcaattacacacagattaagaaatgaactaaagtagtcaaatgtcatagcaattttactaaaataacccta 254927  T
Q  263 ctttataag 271  Q
    |||||||||    
T  254928 ctttataag 254936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 171 - 271
Target Start/End: Complemental strand, 9333307 - 9333207
Alignment:
Q  171 tcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttactttataa 270  Q
    ||||||||| ||||| |||||||||||  | ||||||||| |||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||    
T  9333307 tcaaaatgagtatcgatttaaccaattatatacagattaaggaatgaaataaagtagtcaaatgtcatagcaattttactaaaacaaccttactttataa 9333208  T
Q  271 g 271  Q
    |    
T  9333207 g 9333207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 171 - 271
Target Start/End: Complemental strand, 9357080 - 9356980
Alignment:
Q  171 tcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttactttataa 270  Q
    ||||||||| ||||| |||||||||||  | ||||||||| |||||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||    
T  9357080 tcaaaatgagtatcgatttaaccaattatatacagattaaggaatgaaataaagtagtcaaatgtcatagcaattttactaaaacaaccttactttataa 9356981  T
Q  271 g 271  Q
    |    
T  9356980 g 9356980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 167 - 271
Target Start/End: Original strand, 44582699 - 44582803
Alignment:
Q  167 cgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttacttt 266  Q
    ||||| ||||||| | ||||||||   |||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||| ||||||||    
T  44582699 cgttttaaaatgagtgtcgctttagtgaattgcacacagattaatgaatgaaataaagtagtcaaatgtcataacaattttactaaaataatcttacttt 44582798  T
Q  267 ataag 271  Q
    |||||    
T  44582799 ataag 44582803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 164 - 271
Target Start/End: Complemental strand, 26252354 - 26252247
Alignment:
Q  164 ctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttac 263  Q
    |||||||||||||||| | | |||||||||||||||||||||||||| |||||  || || ||||||||||| || |||||||||||||||||||||||     
T  26252354 ctccgtttcaaaatgagtgttgctttaaccaattgcacacagattaaggaatgggattaagtagtcaaatgtcattgcaattttactaaaataaccttat 26252255  T
Q  264 tttataag 271  Q
    ||||||||    
T  26252254 tttataag 26252247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 165 - 271
Target Start/End: Original strand, 5854143 - 5854249
Alignment:
Q  165 tccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttact 264  Q
    ||||||||||||||| | || ||||| ||||||||||||||||||| ||||  |||||| |||| |||||| ||| |||||||||||||||||| |||||    
T  5854143 tccgtttcaaaatgagtgtcactttagccaattgcacacagattaaggaatagaataaagtagttaaatgtcataacaattttactaaaataactttact 5854242  T
Q  265 ttataag 271  Q
    |||||||    
T  5854243 ttataag 5854249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 193 - 271
Target Start/End: Original strand, 9552302 - 9552380
Alignment:
Q  193 caattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttactttataag 271  Q
    |||||| ||| |||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||    
T  9552302 caattgtacatagattaatgaatgaaataaagtagtcaaatgtcatagcaattttactaaaataaacttactttataag 9552380  T

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Target: chr1; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 170 - 265
Target Start/End: Original strand, 672206 - 672301
Alignment:
Q  170 ttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttactt 265  Q
    |||||||||| | ||| |||||||||||||||||||||||  ||||| |||||| ||||||||| | ||| |||||||||||||||||||||||||    
T  672206 ttcaaaatgagtgtcgttttaaccaattgcacacagattatagaatggaataaagtagtcaaatatcatatcaattttactaaaataaccttactt 672301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 249
Target Start/End: Complemental strand, 15573854 - 15573763
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||| ||| ||||||||||||||| ||| |||| ||||||||||||| ||||| ||||| |||||| |||||||||||||||||||||||||    
T  15573854 tacttccttcgtttcaaaatgaatgtcgttttagccaattgcacacaaattaaagaatggaataaagtagtcaaatgttatagcaattttac 15573763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 269
Target Start/End: Original strand, 50591230 - 50591341
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataa 257  Q
    |||||| | ||||| ||||||| | |||||||| ||||||| ||||||||||| ||||| |||||| |||| |||||| ||| |||||||||||||||||    
T  50591230 tactccattcgttttaaaatgagtgtcgctttagccaattgtacacagattaaggaatggaataaagtagtaaaatgtcataacaattttactaaaataa 50591329  T
Q  258 ccttactttata 269  Q
    ||||| ||||||    
T  50591330 ccttattttata 50591341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 268
Target Start/End: Original strand, 11134372 - 11134482
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataa 257  Q
    |||||||||| ||||||||||| | ||| |||| ||||||||||||| ||||| ||||| |||||| ||||||||||| ||  || |||||||||||||     
T  11134372 tactccctccatttcaaaatgagtgtcgttttagccaattgcacacatattaaggaatggaataaagtagtcaaatgtcatgacagttttactaaaatag 11134471  T
Q  258 ccttactttat 268  Q
    |||||||||||    
T  11134472 ccttactttat 11134482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 32806846 - 32806939
Alignment:
Q  156 tatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||| |||||||||||||||| | |||||||| ||| ||||||||| ||||| ||||| |||||| ||||||||||| |||||||||||||    
T  32806846 tatactctctccgtttcaaaatgattgtcgctttagccagttgcacacatattaaggaatggaataaagtagtcaaatgtcatagcaattttac 32806939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 157 - 249
Target Start/End: Complemental strand, 10843022 - 10842930
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||| ||||||||||||||| | ||| ||||  |||||||||| | ||||| |||||||||||| ||||||||||| |||||||||||||    
T  10843022 atactccatccgtttcaaaatgagtgtcgttttagtcaattgcacaaatattaaggaatgaaataaagtagtcaaatgtcatagcaattttac 10842930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 249
Target Start/End: Original strand, 43358124 - 43358215
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||||| ||||| ||||||||| ||| ||||  |||||| ||| | ||||| |||||||||||||||||||||||| |||||||||||||    
T  43358124 tactcccttcgttttaaaatgaatgtcgttttagtcaattgtacatatattaaggaatgaaataaaatagtcaaatgtcatagcaattttac 43358215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 15823274 - 15823184
Alignment:
Q  159 actccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||| ||||| ||||||| ||||| |||| ||||||||||||| |||||  |||| ||||||||||| |||||| |||||||||||||    
T  15823274 actcccttcgttttaaaatgagtatcgttttagccaattgcacacatattaagaaatggaataaaatagttaaatgtcatagcaattttac 15823184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 163 - 249
Target Start/End: Complemental strand, 48009246 - 48009160
Alignment:
Q  163 cctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||||||||||||| | ||| ||||  |||||||||||| ||||| |||||||||||||||||||||| | |||| ||||||||    
T  48009246 cctccgtttcaaaatgagtgtcgttttagtcaattgcacacatattaaggaatgaaataaaatagtcaaatatcatagtaattttac 48009160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 5463818 - 5463725
Alignment:
Q  156 tatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||||| ||||||||||||||| | |||||||| ||||||||||| | ||||| ||||| |||||| ||||||| ||| ||| |||||||||    
T  5463818 tatactccatccgtttcaaaatgagtgtcgctttagccaattgcacatatattaaggaatgcaataaagtagtcaattgtcataacaattttac 5463725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 158 - 271
Target Start/End: Original strand, 28751320 - 28751433
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataa 257  Q
    ||||||||| |||||||||||| | ||| |||| ||||||||||||||||||| ||||||||||||||| |||   |  ||| || |||||||||| |      
T  28751320 tactccctctgtttcaaaatgagtgtcgttttagccaattgcacacagattaaggaatgaaataaaataatcattagacataacatttttactaaactgc 28751419  T
Q  258 ccttactttataag 271  Q
    ||||||||||||||    
T  28751420 ccttactttataag 28751433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 49426327 - 49426420
Alignment:
Q  156 tatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||||| ||||||||||||||| | ||||||||  |||||||||||| ||||| ||||| ||| || ||||||||||| ||| |||||||||    
T  49426327 tatactccatccgtttcaaaatgagtgtcgctttaggcaattgcacacatattaaggaatggaatgaagtagtcaaatgtgatatcaattttac 49426420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 249
Target Start/End: Complemental strand, 9915685 - 9915594
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||||||||||||||||||| | ||| |||| | |||  |||||| ||||| ||||| |||||| ||||||||||| |||||||||||||    
T  9915685 tactccctccgtttcaaaatgagtgtcgttttagctaataacacacatattaaggaatgtaataaagtagtcaaatgtcatagcaattttac 9915594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 249
Target Start/End: Original strand, 48025164 - 48025255
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||||||||||| |||||   | |||||||||||||||||||||| ||||  ||||| |||||| ||||||||| || ||||||||||||    
T  48025164 tactccctccgttttaaaataggtgtcgctttaaccaattgcacacacattatggaatggaataaagtagtcaaatattgtagcaattttac 48025255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 249
Target Start/End: Complemental strand, 25152042 - 25151960
Alignment:
Q  167 cgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||||||| | | || ||||||||||||||||||||||||| ||||  |||||| ||||||||||| |||| ||||||||    
T  25152042 cgtttcaaaataagtgtcactttaaccaattgcacacagattaaagaatagaataaagtagtcaaatgtcatagtaattttac 25151960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 156 - 249
Target Start/End: Complemental strand, 44108844 - 44108751
Alignment:
Q  156 tatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||||| ||||||||||||||| |  | ||||| ||||||||||||| ||||| |||||||| ||| |||| |||||| ||| |||||||||    
T  44108844 tatactccatccgtttcaaaatgagtgacactttagccaattgcacacatattaaggaatgaaacaaagtagttaaatgtcataacaattttac 44108751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 213 - 269
Target Start/End: Complemental strand, 44024732 - 44024676
Alignment:
Q  213 aatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttactttata 269  Q
    |||| |||||| |||| ||||||||||||||||||||||||||||||||| ||||||    
T  44024732 aatgtaataaagtagttaaatgttatagcaattttactaaaataaccttattttata 44024676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 249
Target Start/End: Complemental strand, 46046214 - 46046123
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||||||||||||| ||||||| ||| |||| ||||||||||| | ||||| ||||  |||||| |||||||| ||  ||||||||||||    
T  46046214 tactccctccgtttcagaatgaatgtcgttttagccaattgcacatatattaaggaatacaataaagtagtcaaacgtcgtagcaattttac 46046123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 215
Target Start/End: Complemental strand, 30006363 - 30006313
Alignment:
Q  165 tccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaat 215  Q
    ||||||||||||||||| ||||||||  |||||||||||||||||||||||    
T  30006363 tccgtttcaaaatgaatgtcgctttagtcaattgcacacagattaatgaat 30006313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 164 - 249
Target Start/End: Original strand, 1740556 - 1740641
Alignment:
Q  164 ctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||||||||||||||| ||| |||| |||||| ||| || ||||| ||||| |||||| || |||||||| ||| |||||||||    
T  1740556 ctccgtttcaaaatgaatgtcgttttagccaattacacgcatattaaagaatggaataaagtactcaaatgtaataacaattttac 1740641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 48259775 - 48259832
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaat 215  Q
    |||||||||||||||||||||| | ||| |||| ||||||||||||||||||| ||||    
T  48259775 tactccctccgtttcaaaatgagtgtcgttttagccaattgcacacagattaaggaat 48259832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 17919741 - 17919801
Alignment:
Q  166 ccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaata 226  Q
    |||||||||||||| | |||||||| |||||| || ||||||||||||||||||| |||||    
T  17919741 ccgtttcaaaatgagtgtcgctttagccaattacatacagattaatgaatgaaatgaaata 17919801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 35847845 - 35847937
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||| |||||||  |||||| | ||||||||  |||||||||||| ||||| ||||  |||||| ||||||||||| ||| |||||||||    
T  35847845 atactccatccgttttgaaatgagtgtcgctttactcaattgcacacatattaaggaattgaataaagtagtcaaatgtcataacaattttac 35847937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 45377070 - 45377138
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaat 225  Q
    ||||||||||||||||||||||| | ||| ||||||||||| |||||| |||||  |||||||| ||||    
T  45377070 atactccctccgtttcaaaatgattgtcgttttaaccaattacacacaaattaagaaatgaaatgaaat 45377138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 158 - 249
Target Start/End: Original strand, 31491680 - 31491771
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||| |||||||| ||||||| | ||| |||| | ||||||| ||| ||| | ||||| |||||| ||||||||||| |||||||||||||    
T  31491680 tactctctccgttttaaaatgagtgtcgttttagcaaattgcaaacatattcaggaatggaataaagtagtcaaatgtcatagcaattttac 31491771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 253
Target Start/End: Original strand, 38530753 - 38530844
Alignment:
Q  162 ccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaa 253  Q
    |||||| ||| ||||||| | |||||||| ||||||  | |||||||||  ||||||||||| |||||||||||   |||||||||||||||    
T  38530753 ccctccattttaaaatgagtgtcgctttagccaattatatacagattaagaaatgaaataaagtagtcaaatgtcgcagcaattttactaaa 38530844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 193 - 248
Target Start/End: Complemental strand, 43759538 - 43759483
Alignment:
Q  193 caattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaatttta 248  Q
    ||||| |||||| ||||| |||||||||||| ||||||||||| ||||||||||||    
T  43759538 caattacacacaaattaaggaatgaaataaagtagtcaaatgtaatagcaatttta 43759483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 271
Target Start/End: Original strand, 84430 - 84543
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataa 257  Q
    |||||| || |||||||||||| | ||||||||  |||||||||||||||||| ||||  ||| ||||| |||   |  ||| || ||||||||||||      
T  84430 tactccatctgtttcaaaatgagtgtcgctttagtcaattgcacacagattaaggaattgaatgaaataatcattagacataacacttttactaaaatgt 84529  T
Q  258 ccttactttataag 271  Q
    ||||||||||||||    
T  84530 ccttactttataag 84543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 12851973 - 12851904
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaata 226  Q
    ||||||| ||||||| ||||| | | |||||||| |||||| |||| ||||||| |||||||||||||||    
T  12851973 atactccatccgttttaaaataagtgtcgctttagccaattacacaaagattaaggaatgaaataaaata 12851904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 271
Target Start/End: Original strand, 17806335 - 17806400
Alignment:
Q  206 attaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttactttataag 271  Q
    ||||| |||||| ||||| |||| |||||| ||| |||||||||||||||||| || |||||||||    
T  17806335 attaaggaatgatataaagtagttaaatgtcataacaattttactaaaataactttcctttataag 17806400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 234
Target Start/End: Complemental strand, 34110761 - 34110692
Alignment:
Q  165 tccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatg 234  Q
    |||||||||||||||  | || |||| |||||| || ||| |||||||||||||||||| ||||||||||    
T  34110761 tccgtttcaaaatgagaaacgttttagccaattacatacaaattaatgaatgaaataaagtagtcaaatg 34110692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 256
Target Start/End: Original strand, 40717301 - 40717370
Alignment:
Q  187 tttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaata 256  Q
    ||||| |||||||||||| ||||  ||||| |||||| ||||||||| | ||||||||||||| ||||||    
T  40717301 tttaatcaattgcacacatattacggaatggaataaagtagtcaaatatcatagcaattttaccaaaata 40717370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 161 - 226
Target Start/End: Complemental strand, 43755264 - 43755199
Alignment:
Q  161 tccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaata 226  Q
    ||||||||||| ||||||| | |||||||| ||||||||||||||||||  ||||| ||| |||||    
T  43755264 tccctccgttttaaaatgagtgtcgctttagccaattgcacacagattacagaatggaatgaaata 43755199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 50591497 - 50591456
Alignment:
Q  154 tttatactccctccgtttcaaaatgaatatcgctttaaccaa 195  Q
    |||||||||||||||||||||||||||||||| |||| ||||    
T  50591497 tttatactccctccgtttcaaaatgaatatcgttttagccaa 50591456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 222
Target Start/End: Original strand, 4471319 - 4471383
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataa 222  Q
    |||| ||||||||||||||||| | ||||||||  |||||||| |||||||||  ||||||||||    
T  4471319 tacttcctccgtttcaaaatgagtgtcgctttagtcaattgcatacagattaagaaatgaaataa 4471383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 249
Target Start/End: Original strand, 46286731 - 46286819
Alignment:
Q  161 tccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||| ||||||||||| | ||| ||||| |||||||||||| |||||  |||  |||||| ||| ||||||| |||||| ||||||    
T  46286731 tccctccttttcaaaatgagtgtcgttttaatcaattgcacacatattaagaaatagaataaagtagacaaatgtcatagcacttttac 46286819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 48319917 - 48319969
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaa 210  Q
    |||| ||||||||||||||||| | |||||||| ||||||||||||| |||||    
T  48319917 tactacctccgtttcaaaatgagtgtcgctttagccaattgcacacatattaa 48319969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 249
Target Start/End: Complemental strand, 50094456 - 50094380
Alignment:
Q  173 aaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||| | ||||||||||||||||||| || ||||| ||||  |||||| |||| |||||| |||| ||||||||    
T  50094456 aaaatgagtgtcgctttaaccaattgcacgcatattaaggaattgaataaagtagttaaatgtaatagtaattttac 50094380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 50349769 - 50349837
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaata 226  Q
    |||||||||||||||||||||| | | |||||| ||||||| ||||| ||||| ||||| ||| |||||    
T  50349769 tactccctccgtttcaaaatgagtgttgctttagccaattgaacacaaattaaggaatggaatgaaata 50349837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 6377204 - 6377266
Alignment:
Q  164 ctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaata 226  Q
    |||||||| ||||||| | |||||||| ||||||||||| | ||||| ||||||||| |||||    
T  6377204 ctccgttttaaaatgagtgtcgctttagccaattgcacataaattaaggaatgaaatgaaata 6377266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 224
Target Start/End: Original strand, 13408246 - 13408312
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaa 224  Q
    |||||||||||||| ||||||| | ||| |||| ||||||||||||| |||||  ||| ||||||||    
T  13408246 tactccctccgttttaaaatgagtgtcgttttagccaattgcacacaaattaagaaattaaataaaa 13408312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 253
Target Start/End: Original strand, 24611483 - 24611524
Alignment:
Q  212 gaatgaaataaaatagtcaaatgttatagcaattttactaaa 253  Q
    |||||||||||| ||||||||||| ||| |||||||||||||    
T  24611483 gaatgaaataaagtagtcaaatgtcataacaattttactaaa 24611524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 45749411 - 45749479
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaata 226  Q
    |||||| ||||||| ||||||| | |||||||||| ||||||||||| ||||   |||| |||||||||    
T  45749411 tactccatccgttttaaaatgagtgtcgctttaactaattgcacacatattacataatggaataaaata 45749479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 249
Target Start/End: Original strand, 52125033 - 52125137
Alignment:
Q  145 ttttgatattttatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaat 244  Q
    ||||| ||| || |||||| ||||||| ||||||| | ||| |||| ||||||| | ||| | |||  |||| |||||| |||||||||||  |||||||    
T  52125033 ttttgttatattttactccatccgttttaaaatgagtgtcgttttagccaattgtatacataataagaaatgtaataaagtagtcaaatgtcgtagcaat 52125132  T
Q  245 tttac 249  Q
    |||||    
T  52125133 tttac 52125137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 5e-34; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 158 - 271
Target Start/End: Complemental strand, 14698230 - 14698117
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataa 257  Q
    |||||||| ||||||||||||| | |||||||| |||||||||||||||||||  |||  |||||| ||||||||||| |||||||||||||||||||||    
T  14698230 tactcccttcgtttcaaaatgagtgtcgctttagccaattgcacacagattaagaaattgaataaagtagtcaaatgtcatagcaattttactaaaataa 14698131  T
Q  258 ccttactttataag 271  Q
    ||||||||||||||    
T  14698130 ccttactttataag 14698117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 158 - 271
Target Start/End: Complemental strand, 25332812 - 25332699
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataa 257  Q
    |||||||||||||| ||||||| | |||||||| | ||||||||||||||||| ||||  |||||| ||||||||||| |||||||||||||||||||||    
T  25332812 tactccctccgttttaaaatgagtgtcgctttagctaattgcacacagattaaggaattgaataaagtagtcaaatgtcatagcaattttactaaaataa 25332713  T
Q  258 ccttactttataag 271  Q
    ||||||||||||||    
T  25332712 ccttactttataag 25332699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 158 - 271
Target Start/End: Original strand, 43388569 - 43388682
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataa 257  Q
    |||||||||||||||||||||| | |||||||| |||||||||||||||||||  |||  |||||| ||||||||||| ||| |||||||||||||||||    
T  43388569 tactccctccgtttcaaaatgagtgtcgctttagccaattgcacacagattaagaaattgaataaagtagtcaaatgtcataacaattttactaaaataa 43388668  T
Q  258 ccttactttataag 271  Q
    ||||||||||||||    
T  43388669 ccttactttataag 43388682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 153 - 264
Target Start/End: Complemental strand, 38809944 - 38809833
Alignment:
Q  153 ttttatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaa 252  Q
    |||| |||||||||| ||||||||||| ||||| |||| ||||||||||||||||||| ||| | |||||| | ||||||||| ||||||||||||||||    
T  38809944 ttttctactccctccatttcaaaatgagtatcgttttagccaattgcacacagattaaggaaaggaataaagtggtcaaatgtcatagcaattttactaa 38809845  T
Q  253 aataaccttact 264  Q
    |||| |||||||    
T  38809844 aatagccttact 38809833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 164 - 271
Target Start/End: Original strand, 775802 - 775909
Alignment:
Q  164 ctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttac 263  Q
    |||| ||| ||||||||| |||||||| ||||||||| ||||||||| ||||  |||||| ||||||||||| ||| ||||||||||||||||||||||     
T  775802 ctcccttttaaaatgaatgtcgctttagccaattgcatacagattaaggaatagaataaagtagtcaaatgtcataacaattttactaaaataaccttaa 775901  T
Q  264 tttataag 271  Q
    ||||||||    
T  775902 tttataag 775909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 158 - 249
Target Start/End: Complemental strand, 4133263 - 4133172
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||||||||||||||||||| | |||||||| ||||||||||||| ||||| ||||| |||||| ||||||||||| |||||||||||||    
T  4133263 tactccctccgtttcaaaatgagtgtcgctttagccaattgcacacatattaaggaatggaataaagtagtcaaatgtcatagcaattttac 4133172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 173 - 267
Target Start/End: Original strand, 39866597 - 39866692
Alignment:
Q  173 aaaatgaatatcgctttaaccaatt-gcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttacttta 267  Q
    ||||||| | ||| ||||||||||| ||||||||||||| ||||| |||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  39866597 aaaatgagtgtcgttttaaccaatttgcacacagattaaggaatggaataaagtagtcaaatgtcatagcaattttactaaaataaccttacttta 39866692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 441141 - 441234
Alignment:
Q  156 tatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||||||||||||||||||||| | ||| |||| ||||||||||||| ||||| ||||| |||||| ||||||||||| |||||||||||||    
T  441141 tatactccctccgtttcaaaatgagtgtcgttttagccaattgcacacaaattaaggaatggaataaagtagtcaaatgtcatagcaattttac 441234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 271
Target Start/End: Original strand, 4566033 - 4566146
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataa 257  Q
    ||||| |||||||| ||||||| | ||||||||  ||||| ||||||||||||  |||| |||||||||||||||| | ||| |||||||||||||||||    
T  4566033 tactctctccgttttaaaatgagtgtcgctttagtcaattacacacagattaaaaaatgtaataaaatagtcaaatatcataacaattttactaaaataa 4566132  T
Q  258 ccttactttataag 271  Q
    ||||| ||||||||    
T  4566133 ccttattttataag 4566146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 158 - 249
Target Start/End: Original strand, 29396592 - 29396683
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||||| |||||||||||| | ||| |||| ||||||||||||||||||| |||||||||||| |||||||||||  ||||||||||||    
T  29396592 tactccctctgtttcaaaatgagtgtcgttttagccaattgcacacagattaaggaatgaaataaagtagtcaaatgtcgtagcaattttac 29396683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 248
Target Start/End: Original strand, 16807429 - 16807519
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaatttta 248  Q
    |||||||||||||| ||||||| | |||||||| ||||||||||||| ||||||||||| |||||| ||||||||||| ||| ||||||||    
T  16807429 tactccctccgttttaaaatgagtgtcgctttagccaattgcacacatattaatgaatggaataaagtagtcaaatgtcataacaatttta 16807519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 158 - 248
Target Start/End: Original strand, 16846710 - 16846800
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaatttta 248  Q
    |||||||||||||| ||||||| | |||||||| ||||||||||||| ||||||||||| |||||| ||||||||||| ||| ||||||||    
T  16846710 tactccctccgttttaaaatgagtgtcgctttagccaattgcacacatattaatgaatggaataaagtagtcaaatgtcataacaatttta 16846800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 167 - 271
Target Start/End: Original strand, 10580777 - 10580881
Alignment:
Q  167 cgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttacttt 266  Q
    ||||||||||||| ||||| || | |||||||||||| ||| || ||||| |||||||||||||||| | || ||||||||| |||||||| ||||||||    
T  10580777 cgtttcaaaatgagtatcgtttaagccaattgcacacggatcaaggaatggaataaaatagtcaaatatcatcgcaattttattaaaataatcttacttt 10580876  T
Q  267 ataag 271  Q
    |||||    
T  10580877 ataag 10580881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 249
Target Start/End: Complemental strand, 29809054 - 29808963
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||| || |||||||||||| | |||||||| ||||||||||||| ||||| |||||||||||| |||||||||||  ||||||||||||    
T  29809054 tactccatctgtttcaaaatgagtgtcgctttagccaattgcacacaaattaaggaatgaaataaagtagtcaaatgtcgtagcaattttac 29808963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 158 - 249
Target Start/End: Complemental strand, 30855346 - 30855255
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||||||||||||||||||| | ||||||||||||||||||| || ||||| ||||  ||||||||||||||||||  || |||||||||    
T  30855346 tactccctccgtttcaaaatgagtgtcgctttaaccaattgcacgcatattaaggaattgaataaaatagtcaaatgtcttaacaattttac 30855255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 249
Target Start/End: Complemental strand, 42743268 - 42743178
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||||||| ||| ||||||| | |||||||| |||||||||||  |||||| |||||||||||| ||||||||||| |||||||||||||    
T  42743268 atactccctccattttaaaatgagtgtcgctttagccaattgcaca--gattaaggaatgaaataaagtagtcaaatgtcatagcaattttac 42743178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 174 - 270
Target Start/End: Complemental strand, 33093593 - 33093498
Alignment:
Q  174 aaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttactttataa 270  Q
    |||||| |||||||||| ||||||| |||| ||||||  ||||||||||| |||| |||||| ||| |||||||||| |||||||||||||||||||    
T  33093593 aaatgagtatcgctttagccaattgtacacggattaagaaatgaaataaagtagttaaatgtcataacaattttact-aaataaccttactttataa 33093498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 165 - 249
Target Start/End: Complemental strand, 42753981 - 42753897
Alignment:
Q  165 tccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||||||||||| | |||||||| |||||| |||||| ||||| |||||||||||| ||| ||||||| |||||||||||||    
T  42753981 tccgtttcaaaatgactgtcgctttagccaattacacacatattaaagaatgaaataaagtagacaaatgtcatagcaattttac 42753897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 151 - 249
Target Start/End: Complemental strand, 12342341 - 12342243
Alignment:
Q  151 tattttatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||| |||||||||||||| ||||||| | ||| |||| |||||||||||   ||||| |||||||||||| ||||||||||| ||| |||||||||    
T  12342341 tattttttactccctccgttttaaaatgagtgtcgttttagccaattgcacatttattaaggaatgaaataaagtagtcaaatgtcataacaattttac 12342243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 163 - 249
Target Start/End: Original strand, 32227928 - 32228014
Alignment:
Q  163 cctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||||||||||| |  ||||||||| ||||||||||||| ||||| |||||||||||| || |||||||| ||| |||||||||    
T  32227928 cctccgtttcaaaataagcatcgctttagccaattgcacacaaattaaggaatgaaataaagtattcaaatgtcataacaattttac 32228014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 172 - 249
Target Start/End: Complemental strand, 38926833 - 38926756
Alignment:
Q  172 caaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||||| | ||||||||  |||||||||||| |||||||||||||||||| ||||||||||| ||| |||||||||    
T  38926833 caaaatgagtgtcgctttagtcaattgcacacatattaatgaatgaaataaagtagtcaaatgtcataacaattttac 38926756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 41984597 - 41984548
Alignment:
Q  222 aaatagtcaaatgttatagcaattttactaaaataaccttactttataag 271  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  41984597 aaatagtcaaatgtcatagcaattttactaaaataaccttactttataag 41984548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 25383396 - 25383488
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||| ||||||| ||||||| | |||||||| |||||||||| || ||||| ||||| |||||| ||||||||| | |||||||||||||    
T  25383396 atactccatccgttttaaaatgagtgtcgctttagccaattgcacgcaaattaaggaatggaataaagtagtcaaatatcatagcaattttac 25383488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 249
Target Start/End: Original strand, 8789342 - 8789433
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||| ||||||| ||||||| | | | ||||  |||||||||||| ||||| |||||||||||||||||||||||| ||| |||||||||    
T  8789342 tactccatccgtttaaaaatgagtgttgttttagacaattgcacacatattaaggaatgaaataaaatagtcaaatgtcataacaattttac 8789433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 249
Target Start/End: Original strand, 36106315 - 36106406
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||| |||||||| ||||||| | |||||||| | ||||||| ||| ||||| |||||||||||| |||||||||||| || |||||||||    
T  36106315 tactcactccgttttaaaatgagtgtcgctttagcaaattgcatacatattaaggaatgaaataaagtagtcaaatgttctaacaattttac 36106406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 249
Target Start/End: Complemental strand, 8774293 - 8774202
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||| ||||||| ||||||| | | | ||||  |||||||||||| ||||| ||||| |||||||||||||||||| ||| |||||||||    
T  8774293 tactccatccgttttaaaatgagtgttgttttagtcaattgcacacatattaaggaatgtaataaaatagtcaaatgtcataacaattttac 8774202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 249
Target Start/End: Original strand, 12393831 - 12393922
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||||||| ||| ||||| | |  |||||||||| |||||||||| |||||  ||||||||||| |||| |||||| |||||||||||||    
T  12393831 tactccctccattttaaaatcagtgccgctttaaccgattgcacacatattaaaaaatgaaataaagtagttaaatgtcatagcaattttac 12393922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 249
Target Start/End: Complemental strand, 18717317 - 18717226
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||| ||||||||||||| || | ||| |||| | ||||||||||||| |||||||||||||||  ||||||||||  ||| |||||||||    
T  18717317 tactctctccgtttcaaaaagagtgtcgttttagctaattgcacacagactaatgaatgaaataatgtagtcaaatgccataacaattttac 18717226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 271
Target Start/End: Complemental strand, 2460016 - 2459902
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaata 256  Q
    |||||| |||||||| ||||||| | ||  ||||||||| |  |||  |||||| ||||  |||||| ||||||||| | |||||||||||||||||| |    
T  2460016 atactctctccgttttaaaatgagtgtcattttaaccaaatatacatggattaaggaatagaataaagtagtcaaatatcatagcaattttactaaaaca 2459917  T
Q  257 accttactttataag 271  Q
    |||||| ||||||||    
T  2459916 accttattttataag 2459902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 271
Target Start/End: Complemental strand, 34225983 - 34225877
Alignment:
Q  165 tccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttact 264  Q
    ||||||||||||||| | |||||||| ||||||||||| ||||||| ||||||||| ||||| |||   |  |||  |||||||||||| |  |||||||    
T  34225983 tccgtttcaaaatgagtgtcgctttagccaattgcacatagattaaggaatgaaatgaaataatcattagacataataattttactaaattgcccttact 34225884  T
Q  265 ttataag 271  Q
    |||||||    
T  34225883 ttataag 34225877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 271
Target Start/End: Original strand, 40987192 - 40987307
Alignment:
Q  156 tatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaat 255  Q
    |||||||||||||||| ||||||| | |||||||| |  |||||||||| ||||| ||||||||| ||||| |||   |  ||| || |||||||||| |    
T  40987192 tatactccctccgttttaaaatgagtgtcgctttagctcattgcacacatattaaggaatgaaatgaaataatcattagacataacacttttactaaatt 40987291  T
Q  256 aaccttactttataag 271  Q
      ||||||||||||||    
T  40987292 gtccttactttataag 40987307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 271
Target Start/End: Complemental strand, 7743634 - 7743528
Alignment:
Q  165 tccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttact 264  Q
    ||||||||||||||| | |||||||| |||||| |||||||||||| |||| |||| ||||| |||   | |||| || |||||||||  |  |||||||    
T  7743634 tccgtttcaaaatgagtgtcgctttagccaatttcacacagattaaagaattaaatgaaataatcatcagatataacacttttactaagttgcccttact 7743535  T
Q  265 ttataag 271  Q
    |||||||    
T  7743534 ttataag 7743528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 4288624 - 4288714
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||| ||| |||||||||||| | ||| | |||| |||||  |||| ||||||||||| ||||||||||  ||||||| ||||||||||||    
T  4288624 atactctctctgtttcaaaatgagtgtcgttctaactaattgttcacatattaatgaatggaataaaatag--aaatgttttagcaattttac 4288714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 271
Target Start/End: Original strand, 14378160 - 14378273
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataa 257  Q
    ||||| |||||||| ||||||| | |||||||| | |||||||||||| |||||||||  ||| ||||| |||  |  |||| || |||||||||| |      
T  14378160 tactctctccgttttaaaatgagtgtcgctttagctaattgcacacagtttaatgaatagaatgaaataatcatttaatataacacttttactaaactgc 14378259  T
Q  258 ccttactttataag 271  Q
    ||||||||||||||    
T  14378260 ccttactttataag 14378273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 43480774 - 43480824
Alignment:
Q  160 ctccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaa 210  Q
    |||||| ||||||||||||| | ||| ||||| ||||||||||||||||||    
T  43480774 ctcccttcgtttcaaaatgagtgtcgttttaagcaattgcacacagattaa 43480824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 210
Target Start/End: Complemental strand, 44228707 - 44228654
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaa-ttgcacacagattaa 210  Q
    |||||||||||||| ||||||||| |||||||| |||| |||||||| ||||||    
T  44228707 tactccctccgttttaaaatgaatgtcgctttagccaatttgcacacggattaa 44228654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 45081818 - 45081886
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaata 226  Q
    |||||| ||||||| ||||||| | ||| ||||   ||||||||||| ||||| |||||||||||||||    
T  45081818 tactccatccgttttaaaatgagtgtcgttttagaaaattgcacacatattaaggaatgaaataaaata 45081886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 150 - 271
Target Start/End: Original strand, 70357 - 70478
Alignment:
Q  150 atattttatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||| |||||||| ||||||| ||||||| | ||||| |||||||||||| |||||||||  |||  |||||| ||||||||||| ||  |||||||||    
T  70357 atattatatactccttccgttttaaaatgagtgtcgctataaccaattgcatacagattaagaaattgaataaagtagtcaaatgtcatgacaattttac 70456  T
Q  250 taaaataaccttactttataag 271  Q
    ||||||||||||||||||||||    
T  70457 taaaataaccttactttataag 70478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 1e-25; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 155 - 271
Target Start/End: Original strand, 17345047 - 17345159
Alignment:
Q  155 ttatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaa 254  Q
    ||||||||||||| ||| ||||||| | |||||||| ||||||||||||    ||| ||||| |||||| ||||| ||||| ||||||||||||||||||    
T  17345047 ttatactccctccattttaaaatgagtgtcgctttagccaattgcacac----taaggaatggaataaagtagtcgaatgtcatagcaattttactaaaa 17345142  T
Q  255 taaccttactttataag 271  Q
    |||||||||||||||||    
T  17345143 taaccttactttataag 17345159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 10520301 - 10520393
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||||||||||  ||||||| | |||||||||||||||| ||||| ||||| |||||||||||| ||||||||||| |||||||||||||    
T  10520301 atactccctccgttgtaaaatgagtgtcgctttaaccaattgtacacatattaaggaatgaaataaagtagtcaaatgtcatagcaattttac 10520393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 193 - 271
Target Start/End: Complemental strand, 6992608 - 6992530
Alignment:
Q  193 caattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttactttataag 271  Q
    ||||||||||||||||||  ||||||||||||||||||||  | |||| ||||||||||||||||||||||||||||||    
T  6992608 caattgcacacagattaagaaatgaaataaaatagtcaaacatcatagtaattttactaaaataaccttactttataag 6992530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 165 - 269
Target Start/End: Complemental strand, 25932864 - 25932760
Alignment:
Q  165 tccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttact 264  Q
    ||||||| ||||| | | ||| |||| |||||| ||||| ||||||  ||||||||||| |||| |||||| ||||||||||||||||||||||||||||    
T  25932864 tccgttttaaaataagtgtcgttttagccaattacacaccgattaagaaatgaaataaagtagttaaatgtcatagcaattttactaaaataaccttact 25932765  T
Q  265 ttata 269  Q
    |||||    
T  25932764 ttata 25932760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 271
Target Start/End: Complemental strand, 26189726 - 26189638
Alignment:
Q  183 tcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttactttataag 271  Q
    ||||||||  ||||||||||||  |||| |||||||||||| |||| |||||| ||||||||| |||||||||||||||||||||||||    
T  26189726 tcgctttagacaattgcacacatgttaaggaatgaaataaagtagttaaatgtcatagcaattatactaaaataaccttactttataag 26189638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 193 - 269
Target Start/End: Complemental strand, 6140806 - 6140730
Alignment:
Q  193 caattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttactttata 269  Q
    |||||||| |||||||||  ||||||||||| ||| ||||| |||||||||||||||||||||||| ||||||||||    
T  6140806 caattgcaaacagattaaaaaatgaaataaagtagacaaattttatagcaattttactaaaataactttactttata 6140730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 193 - 269
Target Start/End: Complemental strand, 6143291 - 6143215
Alignment:
Q  193 caattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttactttata 269  Q
    |||||||| |||||||||  ||||||||||| ||| ||||| |||||||||||||||||||||||| ||||||||||    
T  6143291 caattgcaaacagattaaaaaatgaaataaagtagacaaattttatagcaattttactaaaataactttactttata 6143215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 160 - 249
Target Start/End: Original strand, 23259239 - 23259328
Alignment:
Q  160 ctccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||||||||  |||||||| |||||||| | |||||||||||||||||  ||||||||||| |||||||||||  || |||||||||    
T  23259239 ctccctccgttttgaaatgaatttcgctttagctaattgcacacagattaagaaatgaaataaagtagtcaaatgtcgtaacaattttac 23259328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 249
Target Start/End: Complemental strand, 1135166 - 1135075
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||| |||||||||||||| | | | |||||| ||||||||||||| ||||| ||||| |||||| ||||||||||| ||| |||||||||    
T  1135166 tactctctccgtttcaaaataagtgttgctttagccaattgcacacatattaaggaatggaataaagtagtcaaatgtcatatcaattttac 1135075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 167 - 249
Target Start/End: Complemental strand, 19675210 - 19675128
Alignment:
Q  167 cgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||| ||||||| | |||||||||||||||| ||||| ||||| ||||  |||||| ||||||||||| |||||||||||||    
T  19675210 cgttttaaaatgagtgtcgctttaaccaattgaacacatattaaggaattgaataaagtagtcaaatgtcatagcaattttac 19675128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 24163624 - 24163716
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacaga-ttaatgaatgaaataaaatagtcaaatgttatagcaatttta 248  Q
    ||||||| ||||||| ||| ||| | ||| |||| ||||||||||||| | ||||  ||||||||||||||||||||||| ||||||||||||    
T  24163624 atactccatccgttttaaagtgagtgtcgttttagccaattgcacacataattaagaaatgaaataaaatagtcaaatgtcatagcaatttta 24163716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 234266 - 234196
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagt 228  Q
    |||||||| ||||||||||||| | ||| ||||||||||||||||| |||||| ||||| |||||| ||||    
T  234266 tactcccttcgtttcaaaatgagtgtcgttttaaccaattgcacacggattaaagaatggaataaagtagt 234196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 267
Target Start/End: Complemental strand, 34576734 - 34576677
Alignment:
Q  210 atgaatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttacttta 267  Q
    |||||||||||||| |||||| |||| ||| |||||||||||||||||| ||||||||    
T  34576734 atgaatgaaataaagtagtcagatgtcataacaattttactaaaataactttacttta 34576677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 29713317 - 29713409
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||| ||||||| ||||||| | ||||||||  |||||||||||  ||||| ||||| ||| || |||||||||||||| | ||||||||    
T  29713317 atactccttccgttttaaaatgagtgtcgctttagtcaattgcacacgtattaaggaatggaatcaagtagtcaaatgttatggtaattttac 29713409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 24555837 - 24555930
Alignment:
Q  157 atactccctccgtttcaaaa-tgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||| ||||||| |||| ||| | |||||||||| ||||||| |||||||||  |||  |||||| |||||||||||  ||||||||||||    
T  24555837 atactccatccgttttaaaaatgagtgtcgctttaacaaattgcatacagattaagaaatagaataaagtagtcaaatgtcgtagcaattttac 24555930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 31275553 - 31275621
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaata 226  Q
    |||||||||||||||||||| | | | | |||| ||||||||||||||||||| ||| ||||| |||||    
T  31275553 tactccctccgtttcaaaataagtgttgttttagccaattgcacacagattaaggaaagaaatgaaata 31275621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 271
Target Start/End: Original strand, 12828591 - 12828706
Alignment:
Q  157 atactccctccgtt-tcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaat 255  Q
    |||||||||||||| |||||||||   ||| | || ||||||||||||| ||||||||||||||| ||||| |||   |  ||| || |||||||||| |    
T  12828591 atactccctccgttctcaaaatgagcgtcgttgtagccaattgcacacaaattaatgaatgaaatgaaataatcattagacataacacttttactaaact 12828690  T
Q  256 aaccttactttataag 271  Q
      ||||||||||||||    
T  12828691 gcccttactttataag 12828706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 30627323 - 30627254
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaata 226  Q
    ||||| ||||||||| ||||||| | ||| ||||   ||||||||||| ||||||||||||||| |||||    
T  30627323 atacttcctccgttttaaaatgagtgtcgttttagataattgcacacaaattaatgaatgaaatgaaata 30627254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 20992 - 21084
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    ||||||||||||||| ||||| | | |||||||| ||||||||||| ||||||| |||| |||||||||||||||| || |||||||||||||    
T  20992 atactccctccgttttaaaattagtgtcgctttagccaattgcacatagattaaggaataaaataaaatagtcaaacgtcatagcaattttac 21084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 269
Target Start/End: Complemental strand, 321957 - 321857
Alignment:
Q  169 tttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaataaccttactttat 268  Q
    ||||||||||| | |||||||| | |||||||||| | |||| ||||| |||||| ||||||||| | |||| |||||||||||||||||||||||||||    
T  321957 tttcaaaatgagtgtcgctttagctaattgcacacgggttaaggaatggaataaagtagtcaaatatcatagtaattttactaaaataaccttactttat 321858  T
Q  269 a 269  Q
    |    
T  321857 a 321857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 249
Target Start/End: Original strand, 24652 - 24743
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||| ||||||| ||||||| | |||||||| ||| ||| ||||| ||||| ||||| |||||||||||||||||| |||||||||||||    
T  24652 tactccatccgttttaaaatgagtgtcgctttagccatttgtacacatattaaggaatggaataaaatagtcaaatgtcatagcaattttac 24743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 246
Target Start/End: Original strand, 1360 - 1448
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattt 246  Q
    ||||| |||| ||| ||||||| | || |||||  |||||||||||||||||| |||||||||||| ||||||||||| ||||||||||    
T  1360 tactctctcctttttaaaatgagtgtcactttagtcaattgcacacagattaaggaatgaaataaagtagtcaaatgtcatagcaattt 1448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0758 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 245
Target Start/End: Original strand, 6239 - 6326
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaatt 245  Q
    |||||| ||||||||||||||| | || ||||| | |||||||||| |||||| |||||||||||| ||||||||||| ||| |||||    
T  6239 tactccttccgtttcaaaatgagtgtcactttagctaattgcacacggattaaggaatgaaataaagtagtcaaatgtcataacaatt 6326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 3453 - 3506
Alignment:
Q  195 attgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaatttta 248  Q
    ||||||||||| |||||||||  |||||||||||||||||||||||||||||||    
T  3453 attgcacacagtttaatgaattgaataaaatagtcaaatgttatagcaatttta 3506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 172 - 249
Target Start/End: Complemental strand, 62860 - 62783
Alignment:
Q  172 caaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttac 249  Q
    |||||||| | |||||||| ||||||||||||| ||||| ||||| |||||| ||||||||||| ||| |||||||||    
T  62860 caaaatgagtgtcgctttagccaattgcacacatattaaggaatggaataaagtagtcaaatgtcataacaattttac 62783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 11994 - 12062
Alignment:
Q  158 tactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaata 226  Q
    |||||||||||||||||||||| | |||||||| | ||||||||| ||||||| ||||| ||| |||||    
T  11994 tactccctccgtttcaaaatgagtgtcgctttagcgaattgcacagagattaaggaatggaatgaaata 12062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0580
Description:

Target: scaffold0580; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 271
Target Start/End: Complemental strand, 1816 - 1701
Alignment:
Q  156 tatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaat 255  Q
    |||||||||||||||||||||||| | ||||||||  |  | ||||| |||||||  |||||||| ||||| |||   | |||| || |||||||||| |    
T  1816 tatactccctccgtttcaaaatgagtgtcgctttagacgttggcacatagattaagaaatgaaatgaaataatcattggatataacatttttactaaact 1717  T
Q  256 aaccttactttataag 271  Q
     |||||||||||||||    
T  1716 gaccttactttataag 1701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0580; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 271
Target Start/End: Complemental strand, 9555 - 9440
Alignment:
Q  156 tatactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaatagtcaaatgttatagcaattttactaaaat 255  Q
    |||||||||||||||||||||||| | ||||||||  |  | ||||| |||||||  |||||||| ||||| |||   | |||| || |||||||||| |    
T  9555 tatactccctccgtttcaaaatgagtgtcgctttagacgttggcacatagattaagaaatgaaatgaaataatcattggatataacatttttactaaact 9456  T
Q  256 aaccttactttataag 271  Q
     |||||||||||||||    
T  9455 gaccttactttataag 9440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 216
Target Start/End: Original strand, 9571 - 9630
Alignment:
Q  157 atactccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatg 216  Q
    ||||||||||||||||||||||| | ||| |||| |||||| |||||| ||||| |||||    
T  9571 atactccctccgtttcaaaatgagtgtcgttttagccaattacacacatattaaggaatg 9630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 226
Target Start/End: Complemental strand, 31781 - 31716
Alignment:
Q  161 tccctccgtttcaaaatgaatatcgctttaaccaattgcacacagattaatgaatgaaataaaata 226  Q
    ||||||||||||||||||| | | | | || ||||||||||||| ||||| ||||||||| |||||    
T  31781 tccctccgtttcaaaatgagtgttgttgtagccaattgcacacaaattaacgaatgaaatgaaata 31716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 4091 - 4131
Alignment:
Q  155 ttatactccctccgtttcaaaatgaatatcgctttaaccaa 195  Q
    ||||||||| ||||||||||||||||| ||| |||||||||    
T  4091 ttatactccatccgtttcaaaatgaatgtcgttttaaccaa 4131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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