View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10160_low_4 (Length: 507)
Name: NF10160_low_4
Description: NF10160
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10160_low_4 |
 | |
|
| [»] chr6 (30 HSPs) |
| |
|
| [»] scaffold0288 (1 HSPs) |
| |
|
| [»] scaffold0475 (1 HSPs) |
| |
|
| [»] scaffold0199 (1 HSPs) |
| | |
|
| [»] scaffold0477 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 434; Significance: 0; HSPs: 30)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 434; E-Value: 0
Query Start/End: Original strand, 18 - 507
Target Start/End: Original strand, 4558163 - 4558652
Alignment:
| Q |
18 |
aagaagattaattgttaccttgtagtggtatgagacctttatccaacaatgtactaaaatgaataaaagtcaaaaatgtacatgcattggatggactaaa |
117 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4558163 |
aagaagattaattgttaccttttagtggtatgagacctttatccaacaatgtactaaaatgaataaaagtcaaaaatgtacatgcattggatggactaaa |
4558262 |
T |
|
| Q |
118 |
gaaaacgacagcgattgaaagttcttcagcagcttgtatggtaaaagacatgctaatatcagaaactatgcaagtaactggagggacaagaccagatgtt |
217 |
Q |
| |
|
|||||| || ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4558263 |
gaaaacagaagggattgaaagttcttcagaagcttgtatggtaaaagacatgccaatatcagaaactatgcaagtaactggagggacaagaccagatgtt |
4558362 |
T |
|
| Q |
218 |
tcagagtcatttagtctagcaagaagttcgcggaaaggttgtaggaagttctttctgattgatttacaaagagcgtgtatgtcttgactaacatcgccat |
317 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
4558363 |
gcagagtcatttagtctagcaagaagttcgcggaaaggttgtaggaagttctttctgattgatttacaaagagcgtaaatgtcttgactaacatcgccat |
4558462 |
T |
|
| Q |
318 |
caccatccgttggaggtaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagcaaccgtttgtg |
417 |
Q |
| |
|
||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4558463 |
caccatccgttggagttaaaccatccggaatagtctcaaagctaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagcaaccgtttgtg |
4558562 |
T |
|
| Q |
418 |
gttgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaac |
507 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4558563 |
gttgtattcagtgtttacataggttatgtgaaatcctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaac |
4558652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 353; E-Value: 0
Query Start/End: Original strand, 15 - 507
Target Start/End: Original strand, 4572001 - 4572493
Alignment:
| Q |
15 |
agaaagaagattaattgttaccttgtagtggtatgagacctttatccaacaatgtactaaaatgaataaaagtcaaaaatgtacatgcattggatggact |
114 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||| | ||||||| ||||||||| ||||| |||||||||||||||||||||||| |
|
|
| T |
4572001 |
agaaagaagattaattgttaccttttagtggtatgagacctttatctagaaatgtacgtaaatgaataccagtcagaaatgtacatgcattggatggact |
4572100 |
T |
|
| Q |
115 |
aaagaaaacgacagcgattgaaagttcttcagcagcttgtatggtaaaagacatgctaatatcagaaactatgcaagtaactggagggacaagaccagat |
214 |
Q |
| |
|
||||| ||| || ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||| |
|
|
| T |
4572101 |
aaagacaacattagggattgaaagttcttcagcagcttgtatagtaaaggacatgctaatatcagaaactatgcaactaactggacggacaagaccagat |
4572200 |
T |
|
| Q |
215 |
gtttcagagtcatttagtctagcaagaagttcgcggaaaggttgtaggaagttctttctgattgatttacaaagagcgtgtatgtcttgactaacatcgc |
314 |
Q |
| |
|
||| |||||||||| |||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
4572201 |
gttgcagagtcattaagtctagcaagaagttcgcggaaaggttgtagaaaattcttcctgattgatttacaaagagcgtaaatgtcttgactaacatcgc |
4572300 |
T |
|
| Q |
315 |
catcaccatccgttggaggtaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagcaaccgttt |
414 |
Q |
| |
|
|||| ||||||||||||| |||||||||||||||| |||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
4572301 |
catcgccatccgttggagataaaccatctggaatactctcaaagttaaaattggtgaaaccatcaaaggcattttgacctcttgacttgagcaaccgttt |
4572400 |
T |
|
| Q |
415 |
gtggttgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaac |
507 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
4572401 |
gtgattgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaaattttgctagttgcaacaatggattgatatggccttgaac |
4572493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 353; E-Value: 0
Query Start/End: Original strand, 15 - 507
Target Start/End: Original strand, 4586667 - 4587159
Alignment:
| Q |
15 |
agaaagaagattaattgttaccttgtagtggtatgagacctttatccaacaatgtactaaaatgaataaaagtcaaaaatgtacatgcattggatggact |
114 |
Q |
| |
|
|||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| ||| |||| | |
|
|
| T |
4586667 |
agaaagaagattaattgttaccctttagtggtatgagacctttatccaacaatgtactaaaatgaatacaagtcaaaaacatacatgcactggctggatt |
4586766 |
T |
|
| Q |
115 |
aaagaaaacgacagcgattgaaagttcttcagcagcttgtatggtaaaagacatgctaatatcagaaactatgcaagtaactggagggacaagaccagat |
214 |
Q |
| |
|
||||||||| | | || |||||||||||||||||||||||| ||||| |||||| |||||||||||||||| ||||| |||||||||| |||||||||| |
|
|
| T |
4586767 |
aaagaaaacaagtgggagtgaaagttcttcagcagcttgtatagtaaaggacatggtaatatcagaaactatacaagtgactggagggataagaccagat |
4586866 |
T |
|
| Q |
215 |
gtttcagagtcatttagtctagcaagaagttcgcggaaaggttgtaggaagttctttctgattgatttacaaagagcgtgtatgtcttgactaacatcgc |
314 |
Q |
| |
|
||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | |
|
|
| T |
4586867 |
gttgcagagtcattaagtctagcaagaagttcgcggaaaggttgtaggaagttctttctgattgatttacaaagagcgtaaatgtcttgactaacatcac |
4586966 |
T |
|
| Q |
315 |
catcaccatccgttggaggtaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagcaaccgttt |
414 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||| |||||||||| ||||||||||| |
|
|
| T |
4586967 |
catcaccatccgttggagttaaaccatctggaatagtctcaaagctaaaatcagttaaatcatcaaaggcatttggagctcttgacttaagcaaccgttt |
4587066 |
T |
|
| Q |
415 |
gtggttgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaac |
507 |
Q |
| |
|
||| |||||||||||||||||| ||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
4587067 |
gtgattgtattcagtgtttacaaaggttatgtgaaatcctcgaaggtgaagaagtttagctagtttcaacaatggattgatatggccttgaac |
4587159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 31 - 507
Target Start/End: Complemental strand, 4612801 - 4612319
Alignment:
| Q |
31 |
gttaccttgtagtggtatgagacctttatccaacaatgtactaaaatgaataaaagtcaaaaatgtacatgcattggatggactaaagaaaacgacagcg |
130 |
Q |
| |
|
|||||||| ||||||||||| ||||||||| ||||||||| || |||| | |||| |||||||||||||||||| ||||||||||||||| |||| | |
|
|
| T |
4612801 |
gttaccttttagtggtatgacacctttatcaaacaatgtaagtaagtgaaaaccagtccaaaatgtacatgcattggctggactaaagaaaacaacaggg |
4612702 |
T |
|
| Q |
131 |
attgaaagttcttcagcagcttgtatggtaaaagacatgctaatatcagaaactatgcaagtaactggagggacaagaccagatgtttcagagtcattta |
230 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||| |||||| || |||||| ||||| ||||||||||||||||| || |||||||||| | |
|
|
| T |
4612701 |
attgaaagttcttcaccagcttgtatggtaaaagacatgctattatcagcaattatgcacgtaaccggagggacaagaccagaagtggcagagtcattaa |
4612602 |
T |
|
| Q |
231 |
gtctagcaagaagttcgcggaaaggttgtaggaagttctttctgattgatttacaaagagcgtgtatgtcttgactaacatcgccatcaccatc-----c |
325 |
Q |
| |
|
|||||| || ||||||||| ||||||||||||||||||||||||||||||| ||||||||| | |||||||||||||||||| ||||||||||| | |
|
|
| T |
4612601 |
gtctagaaataagttcgcgaaaaggttgtaggaagttctttctgattgattcacaaagagcatatatgtcttgactaacatcaccatcaccatcgccttc |
4612502 |
T |
|
| Q |
326 |
g-ttggaggtaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagcaaccgtttgtggttgtat |
424 |
Q |
| |
|
| ||| ||||| ||||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||| |||||| |
|
|
| T |
4612501 |
gtttgaaggtagaccatctggtatagcctcaaaggtaaaatcagtgaaaccaacaaaggcatttggacctcttgatttgagcaagcgtttgtgattgtat |
4612402 |
T |
|
| Q |
425 |
tcagtgtttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaac |
507 |
Q |
| |
|
|| ||||| || | ||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |
|
|
| T |
4612401 |
tcggtgttgacgaatgttatgtgaaagcctctaaggtgaagaagttttgctagtttgattaatggattgatatggccttgaac |
4612319 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 28 - 506
Target Start/End: Original strand, 4581062 - 4581540
Alignment:
| Q |
28 |
attgttaccttgtagtggtatgagacctttatccaacaatgtactaaaatgaataaaagtcaaaaatgtacatgcattggatggactaaagaaaacgaca |
127 |
Q |
| |
|
||||||||||| ||||||||||| |||||| || |||| |||| || |||| | |||||||||| |||||||| ||| ||||||||||||||| ||| |
|
|
| T |
4581062 |
attgttaccttttagtggtatgacacctttgtcaaacagtgtaggtaagtgaaaacaagtcaaaaacatacatgcactggctggactaaagaaaacaaca |
4581161 |
T |
|
| Q |
128 |
gcgattgaaagttcttcagcagcttgtatggtaaaagacatgctaatatcagaaactatgcaagtaactggagggacaagaccagatgtttcagagtcat |
227 |
Q |
| |
|
| ||||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||| |
|
|
| T |
4581162 |
gggattgaaagttcttcagcagcttgtattgtaaaatacatgctattatcagaaactatgcaagtaactggagggacaagaccagaagtggcagagtcat |
4581261 |
T |
|
| Q |
228 |
ttagtctagcaagaagttcgcggaaaggttgtaggaagttctttctgattgatttacaaagagcgtgtatgtcttgactaacatcgccatcaccatccgt |
327 |
Q |
| |
|
| ||||||||||||||||| | ||||||||||||||||||||||||||||||| ||| ||||| | |||||||||| ||||||| | ||| || || | |
|
|
| T |
4581262 |
taagtctagcaagaagttcacaaaaaggttgtaggaagttctttctgattgattcacatagagcatatatgtcttgattaacatcactatcgccttctat |
4581361 |
T |
|
| Q |
328 |
tggaggtaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagcaaccgtttgtggttgtattca |
427 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||| |||||||| |||||||| |||||||| |
|
|
| T |
4581362 |
cggagttaaaccatctggaatagtctcaaaggtaaaatcggtgaaaccatcaaacgcttttggacctcttgatttgagcaagcgtttgtgattgtattcg |
4581461 |
T |
|
| Q |
428 |
gtgtttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaa |
506 |
Q |
| |
|
||||| ||| ||||||||||||| ||||||||||||||||| ||||||||| | | |||||| ||||||| ||||||| |
|
|
| T |
4581462 |
gtgttgacaaaggttatgtgaaagcctctaaggtgaagaagctttgctagtgttattaatggagtgatatgtccttgaa |
4581540 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 175 - 507
Target Start/End: Complemental strand, 4489130 - 4488798
Alignment:
| Q |
175 |
atcagaaactatgcaagtaactggagggacaagaccagatgtttcagagtcatttagtctagcaagaagttcgcggaaaggttgtaggaagttctttctg |
274 |
Q |
| |
|
||||||||||| ||||||||||||||||| |||||||| || |||||||||| ||| ||||||||| | | | || ||| | || || || || |
|
|
| T |
4489130 |
atcagaaactaagcaagtaactggagggataagaccagcagtagcagagtcattaagtttagcaagaaatacaccaaagaattggtgaaaattgttcatg |
4489031 |
T |
|
| Q |
275 |
attgatttacaaagagcgtgtatgtcttgactaacatcgccatcaccatccgttggaggtaaaccatctggaatagtctcaaaggtaaaatcagtgaaac |
374 |
Q |
| |
|
|||||| |||||||||| ||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| |||| |
|
|
| T |
4489030 |
attgatagacaaagagcgcgtaaatcttgactaacatcgccatcaccatctgttggagttaaaccatctggaatagtctcaaagctaaaatcagttaaac |
4488931 |
T |
|
| Q |
375 |
catcaaaggcatttggacctcttgacttgagcaaccgtttgtggttgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaagttttgc |
474 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||| ||| ||||||||||||| |||||||||||||| |||||| | |
|
|
| T |
4488930 |
catcaaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcagtgttgacaaaggttatgtgaaatcctctaaggtgaagtagttttcc |
4488831 |
T |
|
| Q |
475 |
tagtttcaacaatggattgatatggccttgaac |
507 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| |
|
|
| T |
4488830 |
tagtttcaacaatgcattgatatggccttgaac |
4488798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 32 - 506
Target Start/End: Original strand, 4599216 - 4599689
Alignment:
| Q |
32 |
ttaccttgtagtggtatgagacctttatccaacaatgtactaaaatgaataaaagtcaaaaatgtacatgcattggatggactaaagaaaacgacagcga |
131 |
Q |
| |
|
||||||| |||||||||||||| ||| || |||||||| || || | | ||||||| |||||||||||||||||||||||||||| ||| | || | |
|
|
| T |
4599216 |
ttaccttttagtggtatgagacatttttcaaacaatgtcggtaagtgtaaacaagtcaagaatgtacatgcattggatggactaaagagaacaataggaa |
4599315 |
T |
|
| Q |
132 |
ttgaaagttcttcagcagcttgtatggtaaaagacatgctaatatcagaaactatgcaagtaactggagggacaagaccagatgtttcagagtcatttag |
231 |
Q |
| |
|
|||||||||||||||| ||||||| ||||| |||||| | |||| ||||| ||||||||||||||||| |||||||| || ||| |||| || |
|
|
| T |
4599316 |
gtgaaagttcttcagcaacttgtatagtaaaggacatgttccaatca-taactaagcaagtaactggagggataagaccagcagtagaagactcatagag |
4599414 |
T |
|
| Q |
232 |
tctagcaagaagttcgcggaaaggttgtaggaagttctttctgattgatttacaaagagcgtgtatgtcttgactaacatcgccatcaccatccgttgga |
331 |
Q |
| |
|
|||||||||||||||||| || ||||| |||||||| ||||||||||||||||| |||| | |||||| || ||||||| ||||||||||| ||||| |
|
|
| T |
4599415 |
tctagcaagaagttcgcgaaatggttggaggaagttatttctgattgatttacagagagaatttatgtcctgtgtaacatcaccatcaccatctattgga |
4599514 |
T |
|
| Q |
332 |
ggtaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagcaaccgtttgtggttgtattcagtgt |
431 |
Q |
| |
|
| ||||||||||||||||||||| |||| ||||||||||||||||| | | ||| ||||||||||| |||||||| |||||||| ||||| || |||| |
|
|
| T |
4599515 |
gttaaaccatctggaatagtctcgaaggaaaaatcagtgaaaccattacgagaattaggacctcttgatttgagcaagcgtttgtgattgtactcggtgt |
4599614 |
T |
|
| Q |
432 |
ttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaa |
506 |
Q |
| |
|
| || ||||||||| ||| |||||||||||||||| ||||||||||| | ||| ||||||||| ||||||| |
|
|
| T |
4599615 |
tcacgaaggttatgtaaaatcctctaaggtgaagaatctttgctagtttgattaatagattgatatttccttgaa |
4599689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 263 - 507
Target Start/End: Original strand, 3173286 - 3173530
Alignment:
| Q |
263 |
aagttctttctgattgatttacaaagagcgtgtatgtcttgactaacatcgccatcaccatccgttggaggtaaaccatctggaatagtctcaaaggtaa |
362 |
Q |
| |
|
|||||||| |||||||| |||||||||| ||| ||||||||||||||| |||||||| ||| ||| || |||||||||||| |||||||||||| ||| |
|
|
| T |
3173286 |
aagttcttgatgattgatcgacaaagagcgcgtaagtcttgactaacatcaccatcaccttccattgaagttaaaccatctggtatagtctcaaagttaa |
3173385 |
T |
|
| Q |
363 |
aatcagtgaaaccatcaaaggcatttggacctcttgacttgagcaaccgtttgtggttgtattcagtgtttacataggttatgtgaaaacctctaaggtg |
462 |
Q |
| |
|
||||| ||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||| ||| |
|
|
| T |
3173386 |
aatcattgaaaccatcaaaggcatttggaccctttgatttgagcaaccgtttgtgattgtattcagtgtttacaaaggttatgtgaaagcctctaaagtg |
3173485 |
T |
|
| Q |
463 |
aagaagttttgctagtttcaacaatggattgatatggccttgaac |
507 |
Q |
| |
|
||| |||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
3173486 |
aagtagttttgctagtttcaacaatgcattgatatggccttgaac |
3173530 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 138 - 506
Target Start/End: Original strand, 4627308 - 4627676
Alignment:
| Q |
138 |
gttcttcagcagcttgtatggtaaaagacatgctaatatcagaaactatgcaagtaactggagggacaagaccagatgtttcagagtcatttagtctagc |
237 |
Q |
| |
|
||||||||||||||||||||||||| ||||| | ||| ||||||| |||||||||||| | |||||||||| || | ||||||| ||| |||| |
|
|
| T |
4627308 |
gttcttcagcagcttgtatggtaaatgacattaaacaatctgaaactaagcaagtaactggtgcaacaagaccagcagtggctgagtcatgaagtttagc |
4627407 |
T |
|
| Q |
238 |
aagaagttcgcggaaaggttgtaggaagttctttctgattgatttacaaagagcgtgtatgtcttgactaacatcgccatcaccatccgttggaggtaaa |
337 |
Q |
| |
|
||||||||| | || || || |||||||||||||| ||||||| |||||| ||||||||||| |||||||||||||||| || ||| | |||| |
|
|
| T |
4627408 |
aagaagttcaccaaagggctgaaggaagttctttcttattgattgggaaagagatggtatgtcttgagtaacatcgccatcaccttctagtggtgttaaa |
4627507 |
T |
|
| Q |
338 |
ccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagcaaccgtttgtggttgtattcagtgtttacat |
437 |
Q |
| |
|
|||||||| || |||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||| |||||||| |||||||||||||| ||| |
|
|
| T |
4627508 |
ccatctggtatggtctcaaaggtaaaatcatcgaaaccatcaaaggcattttcacctcttgatttgagcaaacgtttgtgattgtattcagtgttgacaa |
4627607 |
T |
|
| Q |
438 |
aggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaa |
506 |
Q |
| |
|
||||||||||||| |||||||||||||| | |||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
4627608 |
aggttatgtgaaagcctctaaggtgaagtaattttgctagtatcaacaatggattgatatggccttgaa |
4627676 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 138 - 506
Target Start/End: Original strand, 4517498 - 4517866
Alignment:
| Q |
138 |
gttcttcagcagcttgtatggtaaaagacatgctaatatcagaaactatgcaagtaactggagggacaagaccagatgtttcagagtcatttagtctagc |
237 |
Q |
| |
|
||||||||||||||||||| ||||||| || | |||||||||||||| |||| |||| ||||| | | ||||| | ||| || || |||||||| |
|
|
| T |
4517498 |
gttcttcagcagcttgtatagtaaaagtcaatccaatatcagaaactaagcaactaacaggaggaatatgaccatcattggaagaatctttaagtctagc |
4517597 |
T |
|
| Q |
238 |
aagaagttcgcggaaaggttgtaggaagttctttctgattgatttacaaagagcgtgtatgtcttgactaacatcgccatcaccatccgttggaggtaaa |
337 |
Q |
| |
|
||||||||| | ||| || || ||| |||||||| ||||| | |||||| | ||||||||||||||||| ||||| || || | |||| |||| |
|
|
| T |
4517598 |
aagaagttcacagaaggggtgatagaaattctttcttattgaatcggaaagagagataatgtcttgactaacatcaccatcgccttctatcggagttaaa |
4517697 |
T |
|
| Q |
338 |
ccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagcaaccgtttgtggttgtattcagtgtttacat |
437 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||| |||||||| ||||| ||| |
|
|
| T |
4517698 |
ccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcttttggacctcttgatttgagcaaacgtttgtgattgtattcggtgttgacaa |
4517797 |
T |
|
| Q |
438 |
aggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaa |
506 |
Q |
| |
|
||||||||||||| |||||||| |||||||||||||||||||| ||||| ||||||||||||||||||| |
|
|
| T |
4517798 |
aggttatgtgaaagcctctaagatgaagaagttttgctagttttaacaacggattgatatggccttgaa |
4517866 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 263 - 507
Target Start/End: Original strand, 4575738 - 4575982
Alignment:
| Q |
263 |
aagttctttctgattgatttacaaagagcgtgtatgtcttgactaacatcgccatcaccatccgttggaggtaaaccatctggaatagtctcaaaggtaa |
362 |
Q |
| |
|
|||||| || ||||||||| || ||||| ||||| ||||||||| ||||| |||| ||||||| |||||| |||||||||||| |||||||||||| ||| |
|
|
| T |
4575738 |
aagttcgttatgattgattcaccaagagagtgtaggtcttgacttacatcaccattaccatcctttggagttaaaccatctggtatagtctcaaagttaa |
4575837 |
T |
|
| Q |
363 |
aatcagtgaaaccatcaaaggcatttggacctcttgacttgagcaaccgtttgtggttgtattcagtgtttacataggttatgtgaaaacctctaaggtg |
462 |
Q |
| |
|
| |||||||||||||||||||||||| ||||||||| |||||||| |||||||| |||||||||||||| ||| ||||||||||||| ||||||||||| |
|
|
| T |
4575838 |
agtcagtgaaaccatcaaaggcattttcacctcttgatttgagcaaacgtttgtgattgtattcagtgttaacaaaggttatgtgaaagcctctaaggtg |
4575937 |
T |
|
| Q |
463 |
aagaagttttgctagtttcaacaatggattgatatggccttgaac |
507 |
Q |
| |
|
||| |||||||||| ||||||||||| |||||||||||||||||| |
|
|
| T |
4575938 |
aagcagttttgctattttcaacaatgcattgatatggccttgaac |
4575982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 175 - 505
Target Start/End: Original strand, 4507106 - 4507436
Alignment:
| Q |
175 |
atcagaaactatgcaagtaactggagggacaagaccagatgtttcagagtcatttagtctagcaagaagttcgcggaaaggttgtaggaagttctttctg |
274 |
Q |
| |
|
||||||||||| ||||||||| ||||| |||||||||||| | ||||||||| |||||||| ||||||||||| ||||| | | || |||||||| |
|
|
| T |
4507106 |
atcagaaactaagcaagtaacaggaggcacaagaccagatttcgcagagtcatcaagtctagctagaagttcgcgaaaagggtaaataaatttctttcta |
4507205 |
T |
|
| Q |
275 |
attgatttacaaagagcgtgtatgtcttgactaacatcgccatcaccatccgttggaggtaaaccatctggaatagtctcaaaggtaaaatcagtgaaac |
374 |
Q |
| |
|
|| |||| || || || | | |||| || ||||||| |||||||||||| |||||| |||||||||||| | |||||||||| ||||||||||||||| |
|
|
| T |
4507206 |
atcgattcacgaatagatttcaagtctggattaacatcaccatcaccatccattggagttaaaccatctggtagagtctcaaagttaaaatcagtgaaac |
4507305 |
T |
|
| Q |
375 |
catcaaaggcatttggacctcttgacttgagcaaccgtttgtggttgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaagttttgc |
474 |
Q |
| |
|
|||||||||||||| ||||||||| |||||||| |||||||| |||||||| ||||| ||| ||||||||||||| |||| |||||||||||| || || |
|
|
| T |
4507306 |
catcaaaggcattttcacctcttgatttgagcaagcgtttgtgattgtattcggtgttaacaaaggttatgtgaaagcctcgaaggtgaagaagcttagc |
4507405 |
T |
|
| Q |
475 |
tagtttcaacaatggattgatatggccttga |
505 |
Q |
| |
|
|||||| |||||||||||||||||||||||| |
|
|
| T |
4507406 |
tagtttgaacaatggattgatatggccttga |
4507436 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 140 - 507
Target Start/End: Original strand, 4623467 - 4623834
Alignment:
| Q |
140 |
tcttcagcagcttgtatggtaaaagacatgctaatatcagaaactatgcaagtaactggagggacaagaccagatgtttcagagtcatttagtctagcaa |
239 |
Q |
| |
|
||||||||||||||||| ||||| |||||| | ||| ||||||| |||||||||||| || |||||||||| || ||||||||| ||| | |||| |
|
|
| T |
4623467 |
tcttcagcagcttgtattgtaaatgacatgtaacaatcggaaactaagcaagtaactggtggaacaagaccagcagtggcagagtcatgaagttttgcaa |
4623566 |
T |
|
| Q |
240 |
gaagttcgcggaaaggttgtaggaagttctttctgattgatttacaaagagcgtgtatgtcttgactaacatcgccatcaccatccgttggaggtaaacc |
339 |
Q |
| |
|
||||||| | || || || ||| ||||| || ||||| | | |||||| | ||||||||||||||||||| |||||||| ||| |||| | |||||| |
|
|
| T |
4623567 |
gaagttcacaaaagggatgatagaaattcttccttattgaatcagaaagagagggtatgtcttgactaacatcaccatcaccttccattggtgttaaacc |
4623666 |
T |
|
| Q |
340 |
atctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagcaaccgtttgtggttgtattcagtgtttacatag |
439 |
Q |
| |
|
||||||||| ||||||||| |||| || ||||||||||||||||| |||||||||||||| |||||||| |||||||| |||||||| |||| || || |
|
|
| T |
4623667 |
atctggaatggtctcaaagttaaagtccgtgaaaccatcaaaggcctttggacctcttgatttgagcaagcgtttgtgattgtattcggtgtgaccaaag |
4623766 |
T |
|
| Q |
440 |
gttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaac |
507 |
Q |
| |
|
||||||||||| ||| |||||| |||||| ||||||||||| ||||||||||||||||| |||||||| |
|
|
| T |
4623767 |
gttatgtgaaagcctttaaggtaaagaagctttgctagtttgaacaatggattgatatgaccttgaac |
4623834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 140 - 505
Target Start/End: Complemental strand, 4259144 - 4258779
Alignment:
| Q |
140 |
tcttcagcagcttgtatggtaaaagacatgctaatatcagaaactatgcaagtaactggagggacaagaccagatgtttcagagtcatttagtctagcaa |
239 |
Q |
| |
|
||||||||||||||||| |||| |||||| | ||||||||||| ||||||||| || || |||| ||||| || | ||||| | ||| |||||| |
|
|
| T |
4259144 |
tcttcagcagcttgtatactaaatgacatgtaacaatcagaaactaagcaagtaacaggtggaacaataccagtagtggctgagtcttgaagtttagcaa |
4259045 |
T |
|
| Q |
240 |
gaagttcgcggaaaggttgtaggaagttctttctgattgatttacaaagagcgtgtatgtcttgactaacatcgccatcaccatccgttggaggtaaacc |
339 |
Q |
| |
|
||||||| | || || || |||||||||||||| || |||| | |||| | | ||| ||||||| |||||||||||||||| ||| ||||| | ||| |
|
|
| T |
4259044 |
gaagttcaccaaagggctgaaggaagttctttcttatagattgagaaagggagggtacgtcttgagtaacatcgccatcaccttccactggagtcagacc |
4258945 |
T |
|
| Q |
340 |
atctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagcaaccgtttgtggttgtattcagtgtttacatag |
439 |
Q |
| |
|
|||| ||||||||||||||||||||||| |||||||||||| ||||||| ||||||||| |||||||| |||||||| || ||||||||||| ||| || |
|
|
| T |
4258944 |
atcttgaatagtctcaaaggtaaaatcaatgaaaccatcaacggcattttcacctcttgatttgagcaaacgtttgtgattatattcagtgttgacaaag |
4258845 |
T |
|
| Q |
440 |
gttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttga |
505 |
Q |
| |
|
||||||||||||||| ||| ||||||||| || |||||||| |||||||||||||||||||||||| |
|
|
| T |
4258844 |
gttatgtgaaaacctttaaagtgaagaagcttagctagtttgaacaatggattgatatggccttga |
4258779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 260 - 507
Target Start/End: Original strand, 4618581 - 4618828
Alignment:
| Q |
260 |
aggaagttctttctgattgatttacaaagagcgtgtatgtcttgactaacatcgccatcaccatccgttggaggtaaaccatctggaatagtctcaaagg |
359 |
Q |
| |
|
|||||||||||||| | ||||| |||||||| ||| |||||||||||||| |||||||| ||| |||| | ||||||||||||||| |||||||| |
|
|
| T |
4618581 |
aggaagttctttcttactgattgacaaagagttggtacatcttgactaacatcaccatcaccttccattggtgttaaaccatctggaatgctctcaaagt |
4618680 |
T |
|
| Q |
360 |
taaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagcaaccgtttgtggttgtattcagtgtttacataggttatgtgaaaacctctaag |
459 |
Q |
| |
|
|||| || |||||||||||||| || |||||||||||||| |||||||| |||||||| |||||||| ||||| ||| ||||||||||||| |||||||| |
|
|
| T |
4618681 |
taaagtccgtgaaaccatcaaaagcctttggacctcttgatttgagcaagcgtttgtgattgtattcggtgttaacaaaggttatgtgaaagcctctaag |
4618780 |
T |
|
| Q |
460 |
gtgaagaagttttgctagtttcaacaatggattgatatggccttgaac |
507 |
Q |
| |
|
||||||||| ||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
4618781 |
gtgaagaagctttgctagtttgaacaatggattgatatggccttgaac |
4618828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 263 - 507
Target Start/End: Original strand, 4561945 - 4562189
Alignment:
| Q |
263 |
aagttctttctgattgatttacaaagagcgtgtatgtcttgactaacatcgccatcaccatccgttggaggtaaaccatctggaatagtctcaaaggtaa |
362 |
Q |
| |
|
|||||| || ||||||||| || ||||| ||||| ||||||||||| ||| |||||||||||| |||||| |||||||||||| |||||||||||| ||| |
|
|
| T |
4561945 |
aagttcgttatgattgattcaccaagagagtgtaggtcttgactaatatcaccatcaccatcctttggagttaaaccatctggtatagtctcaaagttaa |
4562044 |
T |
|
| Q |
363 |
aatcagtgaaaccatcaaaggcatttggacctcttgacttgagcaaccgtttgtggttgtattcagtgtttacatagg-ttatgtgaaaacctctaaggt |
461 |
Q |
| |
|
| |||||||||||||||||||||||| ||||||||| || ||||| |||||||| |||||||||||||| ||| ||| |||||||||| ||||| |||| |
|
|
| T |
4562045 |
agtcagtgaaaccatcaaaggcattttcacctcttga-tttagcaaacgtttgtgattgtattcagtgttaacaaaggtttatgtgaaagcctcttaggt |
4562143 |
T |
|
| Q |
462 |
gaagaagttttgctagtttcaacaatggattgatatggccttgaac |
507 |
Q |
| |
|
|||| |||||||||| ||||||||||| ||||||||| |||||||| |
|
|
| T |
4562144 |
gaagcagttttgctattttcaacaatgcattgatatgaccttgaac |
4562189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 299 - 506
Target Start/End: Original strand, 4569393 - 4569596
Alignment:
| Q |
299 |
tcttgactaacatcgccatcaccatccgttggaggtaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttg |
398 |
Q |
| |
|
|||||||||| ||| |||| ||| || || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
4569393 |
tcttgactaatatcaccataaccttctgtcggagttaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcttttggacctcttg |
4569492 |
T |
|
| Q |
399 |
acttgagcaaccgtttgtggttgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatg |
498 |
Q |
| |
|
| |||||||| ||||||| | ||| ||||| ||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
4569493 |
atttgagcaaatgtttgtgat----ttcggtgttgacaaaggttatgtgaaagcctctaaggtgaagaagttttgctagtttcaataatggattgatatg |
4569588 |
T |
|
| Q |
499 |
gccttgaa |
506 |
Q |
| |
|
|||||||| |
|
|
| T |
4569589 |
gccttgaa |
4569596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 220 - 506
Target Start/End: Original strand, 4594250 - 4594536
Alignment:
| Q |
220 |
agagtcatttagtctagcaagaagttcgcggaaaggttgtaggaagttctttctgattgatttacaaagagcgtgtatgtcttgactaacatcgccatca |
319 |
Q |
| |
|
||||||||| ||||| | ||||||||| | || |||| ||||| |||||||| || |||| | ||||| | ||||||||||||||||||| |||||| |
|
|
| T |
4594250 |
agagtcattaagtcttgtaagaagttcacaaaagggtttaaggaaattctttcttatagattgagcaagagagggtatgtcttgactaacatcaccatca |
4594349 |
T |
|
| Q |
320 |
ccatccgttggaggtaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagcaaccgtttgtggt |
419 |
Q |
| |
|
|| ||| |||| | || ||||||||| || || |||||| ||||| ||| ||||||||| |||||||||||||||||||| |||||||| ||||| || | |
|
|
| T |
4594350 |
ccttccattggtgttagaccatctggtatggtttcaaagctaaaaccagggaaaccatctaaggcatttggacctcttgatttgagcaaacgtttatgat |
4594449 |
T |
|
| Q |
420 |
tgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaa |
506 |
Q |
| |
|
||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||| ||||| ||||||| |
|
|
| T |
4594450 |
tgtattcagtgttgacaaaggttatgtgaaatcctctaaggtgaagaagttttgcaagtttgaacaatggatttatatgtccttgaa |
4594536 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 136 - 506
Target Start/End: Complemental strand, 4513954 - 4513581
Alignment:
| Q |
136 |
aagttcttcagcagcttgtatggtaaaagacatgctaatatcagaaactatgcaagtaactggagggacaagaccagatgtttcagagtcatttagtcta |
235 |
Q |
| |
|
||||||||||||| ||||| | ||||| | ||| || ||||||||||| ||||||||| ||| | |||||| | | || |||||||||| ||| || |
|
|
| T |
4513954 |
aagttcttcagcaacttgtgtagtaaatggcataatacaatcagaaactaagcaagtaacaaaaggtataagaccggcttttgcagagtcattaagttta |
4513855 |
T |
|
| Q |
236 |
gcaagaagttcgcggaaaggttgtaggaagttctttctgattgatttacaaagagcgtgtatgtcttgactaacatcgccatca---ccatccgttggag |
332 |
Q |
| |
|
|| | ||||||||| ||||||| | | | |||||||||||||||| | ||||| | ||||||| || |||| ||| || |||||| |||||| |
|
|
| T |
4513854 |
gctaaaagttcgcgaaaaggttcgatgcaattctttctgattgattcgcgaagagatatcaagtcttgagtagcatcaccaccatcgccatccattggag |
4513755 |
T |
|
| Q |
333 |
gtaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagcaaccgtttgtggttgtattcagtgtt |
432 |
Q |
| |
|
||||||||| ||||||||||||||| |||||| |||||||||||||| ||||| ||||||||||| |||||||| |||||||| |||||||| ||||| |
|
|
| T |
4513754 |
ttaaaccatcaggaatagtctcaaagcgaaaatcggtgaaaccatcaaaagcattaggacctcttgatttgagcaaacgtttgtgattgtattcggtgtt |
4513655 |
T |
|
| Q |
433 |
tacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaa |
506 |
Q |
| |
|
||| ||||||||||||| |||||||||||||| |||||||||| | | |||| |||||||||||||||||||| |
|
|
| T |
4513654 |
aacaaaggttatgtgaaagcctctaaggtgaagtagttttgctaatctgaacattggattgatatggccttgaa |
4513581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 298 - 505
Target Start/End: Original strand, 4482183 - 4482390
Alignment:
| Q |
298 |
gtcttgactaacatcgccatcaccatccgttggaggtaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctctt |
397 |
Q |
| |
|
||||||||| || || ||||||| || |||||| |||||||||||| || || |||||||||||||||||||||||||||||||| |||||||| ||| |
|
|
| T |
4482183 |
gtcttgacttacttcatcatcaccttcaattggagttaaaccatctggtatcgtttcaaaggtaaaatcagtgaaaccatcaaaggcttttggacccctt |
4482282 |
T |
|
| Q |
398 |
gacttgagcaaccgtttgtggttgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatat |
497 |
Q |
| |
|
|| || ||||| |||||||| |||||||| ||||| ||| ||||||||||||| |||||||||||||| |||||| ||| ||||||||||| |||||||| |
|
|
| T |
4482283 |
gattttagcaaacgtttgtgattgtattcggtgttgacaaaggttatgtgaaagcctctaaggtgaagtagttttcctattttcaacaatgcattgatat |
4482382 |
T |
|
| Q |
498 |
ggccttga |
505 |
Q |
| |
|
|||||||| |
|
|
| T |
4482383 |
ggccttga |
4482390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 175 - 458
Target Start/End: Complemental strand, 4503226 - 4502943
Alignment:
| Q |
175 |
atcagaaactatgcaagtaactggagggacaagaccagatgtttcagagtcatttagtctagcaagaagttcgcggaaaggttgtaggaagttctttctg |
274 |
Q |
| |
|
||||||||||| ||||||||||||||||| |||||||| || |||||||||| ||| || |||||| ||| | || ||| | || ||||| || |
|
|
| T |
4503226 |
atcagaaactaagcaagtaactggagggataagaccagcagtggcagagtcattaagtttaacaagaaattcaccaaagaattggtgaaaattcttcttg |
4503127 |
T |
|
| Q |
275 |
attgatttacaaagagcgtgtatgtcttgactaacatcgccatcaccatccgttggaggtaaaccatctggaatagtctcaaaggtaaaatcagtgaaac |
374 |
Q |
| |
|
|||||| | | |||||| ||| ||||||||||||||| |||||||| ||| |||| |||||||||||| || |||||||||||||||||| |||||| |
|
|
| T |
4503126 |
attgatagatagagagcgcgtaagtcttgactaacatcaccatcaccttccaccggagttaaaccatctggtatggtctcaaaggtaaaatcattgaaac |
4503027 |
T |
|
| Q |
375 |
catcaaaggcatttggacctcttgacttgagcaaccgtttgtggttgtattcagtgtttacataggttatgtgaaaacctctaa |
458 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| |||||||| |||||||| ||||| ||| ||||||||||||| ||||||| |
|
|
| T |
4503026 |
catcaaaggcatttggacctcttgatttgagcaagcgtttgtgattgtattcggtgttgacaaaggttatgtgaaatcctctaa |
4502943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 175 - 505
Target Start/End: Original strand, 4471112 - 4471439
Alignment:
| Q |
175 |
atcagaaactatgcaagtaactggagggacaagaccagatgtttcagagtcatttagtctagcaagaagttcgcggaaaggttgtaggaagttctttctg |
274 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||||||| || ||||| ||| ||||||| ||||||||| | || ||||| ||||||| | | || |
|
|
| T |
4471112 |
atcagaaattatgcaagtaactggagggataagaccagcagtggcagaggcatcaagtctagtaagaagttcaccaaagggttgaaggaagtccgtcatg |
4471211 |
T |
|
| Q |
275 |
attgatttacaaagagcgtgtatgtcttgactaacatcgccatcaccatccgttggaggtaaaccatctggaatagtctcaaaggtaaaatcagtgaaac |
374 |
Q |
| |
|
|||||| | ||| | ||||||||||||| ||| ||| ||| | ||| ||| || ||||||| |||||| ||||||||| |||| |||||||||| |
|
|
| T |
4471212 |
attgatcgaaaaaaggagtgtatgtcttgaataagatcacca---ctttccattgcagtaaaaccatttggaatggtctcaaagttaaagtcagtgaaac |
4471308 |
T |
|
| Q |
375 |
catcaaaggcatttggacctcttgacttgagcaaccgtttgtggttgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaagttttgc |
474 |
Q |
| |
|
|||||| | || ||||||||||| |||||||| |||||| |||||||||||||| ||| | ||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
4471309 |
catcaagagaatcaggacctcttgaattgagcaaggctttgtgattgtattcagtgttgacaaacgttatgtgaaagcctctaaggtgaagaagctttgc |
4471408 |
T |
|
| Q |
475 |
tagtttcaacaatggattgatatggccttga |
505 |
Q |
| |
|
|||||||||||||| |||||||||||||||| |
|
|
| T |
4471409 |
tagtttcaacaatgcattgatatggccttga |
4471439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 286 - 506
Target Start/End: Complemental strand, 4265879 - 4265659
Alignment:
| Q |
286 |
aagagcgtgtatgtcttgactaacatcgccatcaccatccgttggaggtaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggca |
385 |
Q |
| |
|
||||| || |||||||||| || |||| |||| || ||| |||||| || ||||||||| || |||||||| |||| ||| |||||||||||| | | |
|
|
| T |
4265879 |
aagagggtatatgtcttgagtagcatcaccattgccttccattggagttagaccatctggtatggtctcaaacttaaagtcactgaaaccatcaagagaa |
4265780 |
T |
|
| Q |
386 |
tttggacctcttgacttgagcaaccgtttgtggttgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaaca |
485 |
Q |
| |
|
|||||||||||||| |||||||| |||||||| |||||||||||||| ||| ||||||||||||| ||||||||||||||||| ||| |||| || |||| |
|
|
| T |
4265779 |
tttggacctcttgatttgagcaagcgtttgtgattgtattcagtgttgacaaaggttatgtgaaagcctctaaggtgaagaagctttcctagattgaaca |
4265680 |
T |
|
| Q |
486 |
atggattgatatggccttgaa |
506 |
Q |
| |
|
||| ||||||||||||||||| |
|
|
| T |
4265679 |
atgcattgatatggccttgaa |
4265659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 338 - 506
Target Start/End: Original strand, 4603468 - 4603636
Alignment:
| Q |
338 |
ccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagcaaccgtttgtggttgtattcagtgtttacat |
437 |
Q |
| |
|
|||||||| || || |||||| ||||||||||||| || || |||||||| ||||||||||| |||||||| |||||||| |||||||| ||||| ||| |
|
|
| T |
4603468 |
ccatctgggattgtttcaaagctaaaatcagtgaagccgtctaaggcattaggacctcttgatttgagcaaacgtttgtgattgtattcggtgttgacaa |
4603567 |
T |
|
| Q |
438 |
aggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaa |
506 |
Q |
| |
|
||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
4603568 |
aggttatgtgaaatcctctaaggtgaaatagttttgctagtttcaacattggattgatatggccttgaa |
4603636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 335 - 504
Target Start/End: Original strand, 4462562 - 4462731
Alignment:
| Q |
335 |
aaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagcaaccgtttgtggttgtattcagtgttta |
434 |
Q |
| |
|
||||||| |||||| ||||||||| |||| |||||||||||||| | | ||| ||||||||||| |||||||| | ||||| |||||||||||||| | |
|
|
| T |
4462562 |
aaaccatttggaatggtctcaaagttaaagtcagtgaaaccatctagagaattaggacctcttgaattgagcaagcaattgtgattgtattcagtgttga |
4462661 |
T |
|
| Q |
435 |
cataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttg |
504 |
Q |
| |
|
|| |||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
4462662 |
caaaggttatgtgaaaacctctaaggtgaagtagttttcctagtttcaacaatgcattgatatggccttg |
4462731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 138 - 432
Target Start/End: Complemental strand, 4298468 - 4298174
Alignment:
| Q |
138 |
gttcttcagcagcttgtatggtaaaagacatgctaatatcagaaactatgcaagtaactggagggacaagaccagatgtttcagagtcatttagtctagc |
237 |
Q |
| |
|
||||||| ||||||||||||||||| ||||| || ||||| ||||| |||||||||||| || |||||||||| || |||| ||| ||| |||| |
|
|
| T |
4298468 |
gttcttccgcagcttgtatggtaaatgacattaaaaaatcagcaactaagcaagtaactggtggtacaagaccagcagtggcagaatcacgaagtttagc |
4298369 |
T |
|
| Q |
238 |
aagaagttcgcggaaaggttgtaggaagttctttctgattgatttacaaagagcgtgtatgtcttgactaacatcgccatcaccatccgttggaggtaaa |
337 |
Q |
| |
|
||||||||| | || || || |||||||||||||||||||||| |||||| ||||||||||| ||||||| |||||||| |||||||||| | | |
|
|
| T |
4298368 |
aagaagttcaccaaagggctgaaggaagttctttctgattgattgggaaagagatggtatgtcttgagtaacatctccatcaccttccgttggagtcaga |
4298269 |
T |
|
| Q |
338 |
ccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagcaaccgtttgtggttgtattcagtgtt |
432 |
Q |
| |
|
||||||||||||||||||||| |||| | |||||||||||||| || |||||||| ||||| | ||||| ||||||| |||||||| ||||| |
|
|
| T |
4298268 |
ccatctggaatagtctcaaagctaaagttggtgaaaccatcaaaagcttttggaccccttgattcgagcaggtgtttgtgattgtattcggtgtt |
4298174 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 299 - 506
Target Start/End: Original strand, 4565348 - 4565555
Alignment:
| Q |
299 |
tcttgactaacatcgccatcaccatccgttggaggtaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttg |
398 |
Q |
| |
|
|||||||||||||| |||||||| || | || | || ||||||||| || || |||||| |||| || | ||||||| ||||||||||||||||||| |
|
|
| T |
4565348 |
tcttgactaacatcaccatcaccttctatcggtgttagaccatctggtatggtttcaaagcaaaaaccacgggaaccatctaaggcatttggacctcttg |
4565447 |
T |
|
| Q |
399 |
acttgagcaaccgtttgtggttgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatg |
498 |
Q |
| |
|
| || ||||| ||||| || |||||||||||||| ||| ||||||| ||||| ||||||||||||||||||||||| ||||| ||||||||||| ||||| |
|
|
| T |
4565448 |
attttagcaatcgtttatgattgtattcagtgttgacaaaggttatatgaaatcctctaaggtgaagaagttttgcaagtttgaacaatggatttatatg |
4565547 |
T |
|
| Q |
499 |
gccttgaa |
506 |
Q |
| |
|
||||||| |
|
|
| T |
4565548 |
tccttgaa |
4565555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 367 - 432
Target Start/End: Complemental strand, 4255550 - 4255485
Alignment:
| Q |
367 |
agtgaaaccatcaaaggcatttggacctcttgacttgagcaaccgtttgtggttgtattcagtgtt |
432 |
Q |
| |
|
|||| ||||||||||||| |||||||||||||| | |||||| |||||||| |||||||| ||||| |
|
|
| T |
4255550 |
agtggaaccatcaaaggcttttggacctcttgattcgagcaagcgtttgtgattgtattcggtgtt |
4255485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 454 - 503
Target Start/End: Complemental strand, 4497899 - 4497850
Alignment:
| Q |
454 |
tctaaggtgaagaagttttgctagtttcaacaatggattgatatggcctt |
503 |
Q |
| |
|
|||||||||||| | |||| |||||||||||||||||||||||||||||| |
|
|
| T |
4497899 |
tctaaggtgaagtaattttcctagtttcaacaatggattgatatggcctt |
4497850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 4255607 - 4255551
Alignment:
| Q |
140 |
tcttcagcagcttgtatggtaaaagacatgctaatatcagaaactatgcaagtaact |
196 |
Q |
| |
|
||||||||||||||||||||||| |||||| | ||||||||||| |||||||||| |
|
|
| T |
4255607 |
tcttcagcagcttgtatggtaaatgacatgtaacaatcagaaactaagcaagtaact |
4255551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 241; Significance: 1e-133; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 15 - 366
Target Start/End: Complemental strand, 16685387 - 16685029
Alignment:
| Q |
15 |
agaaagaagattaattgttaccttgtagtggtatgagacctttatccaacaatgtactaaaatgaataaaagtcaaaaatgtacatgcattggatggact |
114 |
Q |
| |
|
|||||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| | |
|
|
| T |
16685387 |
agaaagaagattcattgttaccatttagtggtatgagacctttatccaacaatgtactaaaatgaataaaagttaaaaatgtacatgcattcgatggatt |
16685288 |
T |
|
| Q |
115 |
aaagaaaacgacagcgattgaaagttcttcagcagcttgtatggtaaaagacatgctaatatcagaaactatgcaagtaactggagggacaagaccagat |
214 |
Q |
| |
|
||||| ||| |||| || |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16685287 |
aaagagaacaacagggagtgaaagttcttcagcagcttgtatagtaaaagacatgctaatatcagaaactatgcaagtaactggagggacaagaccagat |
16685188 |
T |
|
| Q |
215 |
g-------tttcagagtcatttagtctagcaagaagttcgcggaaaggttgtaggaagttctttctgattgatttacaaagagcgtgtatgtcttgacta |
307 |
Q |
| |
|
| | || ||||| |||||||||||| ||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16685187 |
gatgcaccgtgcacggtcatgaagtctagcaagatgttcgcgaaagggttggaggaagttctttctgattgatttacaaagagcgtgtatgtcttgacta |
16685088 |
T |
|
| Q |
308 |
acatcgccatcaccatccgttggaggtaaaccatctggaatagtctcaaaggtaaaatc |
366 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |
|
|
| T |
16685087 |
acatcgccatcaccatccgttggaggtaaaccatatggaatagtctcaaagctaaaatc |
16685029 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 301 - 505
Target Start/End: Original strand, 1675842 - 1676046
Alignment:
| Q |
301 |
ttgactaacatcgccatcaccatccgttggaggtaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgac |
400 |
Q |
| |
|
|||||||||||| |||||||| || ||| | || ||||||||| || || |||||| ||||||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
1675842 |
ttgactaacatcaccatcaccttctagtggtgttagaccatctgggatggtttcaaagctaaaatcagtgaaaccatccaaggcagttggacctcttgat |
1675941 |
T |
|
| Q |
401 |
ttgagcaaccgtttgtggttgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggc |
500 |
Q |
| |
|
|||||||| |||||||| |||||||||||||| |||||||||| ||| | ||||||||||||| ||||||||||||||| ||||||||||||||||||| |
|
|
| T |
1675942 |
ttgagcaaacgtttgtgattgtattcagtgttgacataggttacatgagagcctctaaggtgaataagttttgctagtttgaacaatggattgatatggc |
1676041 |
T |
|
| Q |
501 |
cttga |
505 |
Q |
| |
|
||||| |
|
|
| T |
1676042 |
cttga |
1676046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 136 - 506
Target Start/End: Complemental strand, 20862776 - 20862412
Alignment:
| Q |
136 |
aagttcttcagcagcttgtatggtaaaagacatgctaatatcagaaactatgcaagtaactggagggacaagaccagatgtttcagagtcatttagtcta |
235 |
Q |
| |
|
||||||||||||| |||||||||||| |||||| | |||||||||||| ||||||||| ||||| | |||||||||| | |||||||| ||| | |
|
|
| T |
20862776 |
aagttcttcagcaacttgtatggtaactgacatgaaactatcagaaactaagcaagtaacaggaggtataagaccagatttggaagagtcatgaagtttg |
20862677 |
T |
|
| Q |
236 |
gcaagaagttcgcggaaaggttgtaggaagttctttctgattgatttacaaagagcgtgtatgtcttgactaacatcgccatcaccatccgttggaggta |
335 |
Q |
| |
|
||||||||||| || ||| | | ||||||| |||||||| ||| || ||||| || | ||||||||||||||| |||||||| || || | |
|
|
| T |
20862676 |
gcaagaagttcacgaaaactgtcgatgaagttcgttctgattaattcacgaagagattggaagtcttgactaacatc---atcaccatg---tgaagttg |
20862583 |
T |
|
| Q |
336 |
aaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagcaaccgtttgtggttgtattcagtgtttac |
435 |
Q |
| |
|
|||||||||||| ||||||||| ||| ||||||||||||||||||| ||||||| ||||||| ||||| |||||||| ||||||||||| || || |
|
|
| T |
20862582 |
aaccatctggaacggtctcaaagcgaaagtcagtgaaaccatcaaagggtattggacccattgacttaagcaagcgtttgtgattgtattcagtattgac |
20862483 |
T |
|
| Q |
436 |
ataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaa |
506 |
Q |
| |
|
| | ||||||| ||| |||||||||||||| |||||||||||||| |||| |||||||||||| ||||||| |
|
|
| T |
20862482 |
aaatgttatgtaaaagcctctaaggtgaagtagttttgctagttttaacattggattgatatgaccttgaa |
20862412 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 162; Significance: 3e-86; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 139 - 507
Target Start/End: Complemental strand, 2423 - 2052
Alignment:
| Q |
139 |
ttcttcagcagcttgtatggtaaaagacatgctaatatcagaaactatgcaagtaactggagggacaagaccagatgtttcagagtcatttagtctagca |
238 |
Q |
| |
|
|||||||||||||||||||||||| |||||| | ||||||||||| || ||| |||||||||| ||||||||| | |||| || | ||||||||| |
|
|
| T |
2423 |
ttcttcagcagcttgtatggtaaatgacatgtaacaatcagaaactaagctagttactggagggataagaccagaattggcagactcgtcaagtctagca |
2324 |
T |
|
| Q |
239 |
agaagttcgcggaaaggttgtaggaagttctttctgattgatttacaaagagcgtgtatgtcttgactaacatcgccatcaccatc---cgttggaggta |
335 |
Q |
| |
|
||||||||||| || || |||||||| |||||||||||||||||||||| | |||||||||||||||||| |||||| |||| | ||||| || |
|
|
| T |
2323 |
agaagttcgcgaaagaagtgaaggaagttttttctgattgatttacaaagagagagtatgtcttgactaacattaccatcatcatcttccactggagtta |
2224 |
T |
|
| Q |
336 |
aaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagcaaccgtttgtggttgtattcagtgtttac |
435 |
Q |
| |
|
||||||| ||||||||||| ||| |||||||| ||||||||||| ||||| ||||||||||| |||||||| ||||| || |||||||||||||| || |
|
|
| T |
2223 |
aaccatcgggaatagtctcgaagcaaaaatcagcgaaaccatcaagagcattaggacctcttgatttgagcaagcgtttatgattgtattcagtgttgac |
2124 |
T |
|
| Q |
436 |
ataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggccttgaac |
507 |
Q |
| |
|
| ||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
2123 |
aaaggttatgtgaaagcctctaaggtgaagaagctttgctagtttgaacaatggattgatatggccttgaac |
2052 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 142; Significance: 3e-74; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 175 - 507
Target Start/End: Original strand, 2016 - 2351
Alignment:
| Q |
175 |
atcagaaactatgcaagtaactggagggacaagaccagatgtttcagagtcatttagtctagcaagaagttcgcggaaaggttgtaggaagttctttctg |
274 |
Q |
| |
|
||||||||||| || ||| |||||||||| ||||||||| | |||| || | |||||||||||||||||||| || || |||||||| |||||| |
|
|
| T |
2016 |
atcagaaactaagctagttactggagggataagaccagaattggcagactcgtcaagtctagcaagaagttcgcgaaagaagtgaaggaagttttttctg |
2115 |
T |
|
| Q |
275 |
attgatttacaaagagcgtgtatgtcttgactaacatcgccatcaccatc---cgttggaggtaaaccatctggaatagtctcaaaggtaaaatcagtga |
371 |
Q |
| |
|
|||||||||||||||| | |||||||||||||||||| |||||| |||| | ||||| ||||||||| ||||||||||| ||| |||||||| || |
|
|
| T |
2116 |
attgatttacaaagagagagtatgtcttgactaacattaccatcatcatcttccactggagttaaaccatcgggaatagtctcgaagcaaaaatcagcga |
2215 |
T |
|
| Q |
372 |
aaccatcaaaggcatttggacctcttgacttgagcaaccgtttgtggttgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaagttt |
471 |
Q |
| |
|
||||||||| ||||| ||||||||||| |||||||| ||||| || |||||||||||||| ||| ||||||||||||| ||||||||||||||||| || |
|
|
| T |
2216 |
aaccatcaagagcattaggacctcttgatttgagcaagcgtttatgattgtattcagtgttgacaaaggttatgtgaaagcctctaaggtgaagaagctt |
2315 |
T |
|
| Q |
472 |
tgctagtttcaacaatggattgatatggccttgaac |
507 |
Q |
| |
|
||||||||| || ||||||||||||||||||||||| |
|
|
| T |
2316 |
tgctagtttgaataatggattgatatggccttgaac |
2351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0199 (Bit Score: 109; Significance: 1e-54; HSPs: 1)
Name: scaffold0199
Description:
Target: scaffold0199; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 301 - 505
Target Start/End: Original strand, 1079 - 1283
Alignment:
| Q |
301 |
ttgactaacatcgccatcaccatccgttggaggtaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctcttgac |
400 |
Q |
| |
|
|||||||||||| |||||||| || ||| | || ||||||||| || || |||||| ||||||||||||||||||| |||||| ||||||||||||| |
|
|
| T |
1079 |
ttgactaacatcaccatcaccttctagtggtgttagaccatctgggatggtttcaaagctaaaatcagtgaaaccatccaaggcagttggacctcttgat |
1178 |
T |
|
| Q |
401 |
ttgagcaaccgtttgtggttgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatatggc |
500 |
Q |
| |
|
|||||||| |||||||| |||||||||||||| |||||||||| ||| | ||||||||||||| ||||||||||||||| ||||||||||||||||||| |
|
|
| T |
1179 |
ttgagcaaacgtttgtgattgtattcagtgttgacataggttacatgagagcctctaaggtgaataagttttgctagtttgaacaatggattgatatggc |
1278 |
T |
|
| Q |
501 |
cttga |
505 |
Q |
| |
|
||||| |
|
|
| T |
1279 |
cttga |
1283 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 106; Significance: 8e-53; HSPs: 5)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 260 - 505
Target Start/End: Original strand, 1282713 - 1282958
Alignment:
| Q |
260 |
aggaagttctttctgattgatttacaaagagcgtgtatgtcttgactaacatcgccatcaccatccgttggaggtaaaccatctggaatagtctcaaagg |
359 |
Q |
| |
|
||||| |||||||| || |||| |||||||| ||| | |||||||||||| |||||||| || || | || ||||||||| || || |||||| |
|
|
| T |
1282713 |
aggaaattctttcttatagattgacaaagagaaggtacatgttgactaacatcaccatcaccttctagtgatgttagaccatctgggatggtttcaaagc |
1282812 |
T |
|
| Q |
360 |
taaaatcagtgaaaccatcaaaggcatttggacctcttgacttgagcaaccgtttgtggttgtattcagtgtttacataggttatgtgaaaacctctaag |
459 |
Q |
| |
|
||||||||||||||||||| | |||||||||||||||||| |||||||| |||||||| ||||||||||| || ||| ||||||||| ||| |||||||| |
|
|
| T |
1282813 |
taaaatcagtgaaaccatctagggcatttggacctcttgatttgagcaagcgtttgtgattgtattcagtattaacaaaggttatgtaaaagcctctaag |
1282912 |
T |
|
| Q |
460 |
gtgaagaagttttgctagtttcaacaatggattgatatggccttga |
505 |
Q |
| |
|
|||||| |||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
1282913 |
gtgaagtagttttgctagtttgaacaatggattgatatggccttga |
1282958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 410 - 454
Target Start/End: Original strand, 35776276 - 35776320
Alignment:
| Q |
410 |
cgtttgtggttgtattcagtgtttacataggttatgtgaaaacct |
454 |
Q |
| |
|
|||||||||||| |||||||||| ||| ||||||||||||||||| |
|
|
| T |
35776276 |
cgtttgtggttgaattcagtgttcacaaaggttatgtgaaaacct |
35776320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 453
Target Start/End: Original strand, 35842083 - 35842126
Alignment:
| Q |
410 |
cgtttgtggttgtattcagtgtttacataggttatgtgaaaacc |
453 |
Q |
| |
|
|||||||||||| |||||||||| ||| |||||||||||||||| |
|
|
| T |
35842083 |
cgtttgtggttgaattcagtgttcacaaaggttatgtgaaaacc |
35842126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 453
Target Start/End: Original strand, 35854591 - 35854634
Alignment:
| Q |
410 |
cgtttgtggttgtattcagtgtttacataggttatgtgaaaacc |
453 |
Q |
| |
|
|||||||||||| |||||||||| ||| |||||||||||||||| |
|
|
| T |
35854591 |
cgtttgtggttgaattcagtgttcacaaaggttatgtgaaaacc |
35854634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 453
Target Start/End: Original strand, 35869200 - 35869243
Alignment:
| Q |
410 |
cgtttgtggttgtattcagtgtttacataggttatgtgaaaacc |
453 |
Q |
| |
|
|||||||||||| |||||||||| ||| |||||||||||||||| |
|
|
| T |
35869200 |
cgtttgtggttgaattcagtgttcacaaaggttatgtgaaaacc |
35869243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 93; Significance: 5e-45; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 298 - 506
Target Start/End: Original strand, 3088063 - 3088271
Alignment:
| Q |
298 |
gtcttgactaacatcgccatcaccatccgttggaggtaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggcatttggacctctt |
397 |
Q |
| |
|
||||||||||||||| |||| ||| ||| |||||| || ||||||| | |||||||||||| |||||||||||||||||||| | ||| | ||||||| |
|
|
| T |
3088063 |
gtcttgactaacatcaccattaccttccattggagttagaccatcttggatagtctcaaagacaaaatcagtgaaaccatcaagagaattagaacctctt |
3088162 |
T |
|
| Q |
398 |
gacttgagcaaccgtttgtggttgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaacaatggattgatat |
497 |
Q |
| |
|
|| || ||||| || ||||| |||||||| || || ||| ||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
3088163 |
gatttaagcaaacggttgtgattgtattcggtattgacaaaggttatgtgaaagcctttaaggtgaagaagttttgctagttttaacaatggatttatat |
3088262 |
T |
|
| Q |
498 |
ggccttgaa |
506 |
Q |
| |
|
| ||||||| |
|
|
| T |
3088263 |
gaccttgaa |
3088271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 286 - 506
Target Start/End: Original strand, 24104401 - 24104621
Alignment:
| Q |
286 |
aagagcgtgtatgtcttgactaacatcgccatcaccatccgttggaggtaaaccatctggaatagtctcaaaggtaaaatcagtgaaaccatcaaaggca |
385 |
Q |
| |
|
||||| || |||||||||| ||||||| |||| || ||| |||||| || ||||||||| || ||||||||| |||| ||| |||||||||||| | | |
|
|
| T |
24104401 |
aagagggtatatgtcttgagtaacatcaccattgccttccattggagttagaccatctggtatggtctcaaagttaaagtcattgaaaccatcaagagaa |
24104500 |
T |
|
| Q |
386 |
tttggacctcttgacttgagcaaccgtttgtggttgtattcagtgtttacataggttatgtgaaaacctctaaggtgaagaagttttgctagtttcaaca |
485 |
Q |
| |
|
|| ||| ||||||| | |||||| |||||||| |||||||| ||||| || ||||||||||||| ||||||||||||||||| ||| ||||||| |||| |
|
|
| T |
24104501 |
ttaggatctcttgattcgagcaagcgtttgtgattgtattcggtgttcacgaaggttatgtgaaagcctctaaggtgaagaagctttcctagtttgaaca |
24104600 |
T |
|
| Q |
486 |
atggattgatatggccttgaa |
506 |
Q |
| |
|
||| ||||||||| ||||||| |
|
|
| T |
24104601 |
atgcattgatatgaccttgaa |
24104621 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 320
Target Start/End: Complemental strand, 3492 - 3310
Alignment:
| Q |
138 |
gttcttcagcagcttgtatggtaaaagacatgctaatatcagaaactatgcaagtaactggagggacaagaccagatgtttcagagtcatttagtctagc |
237 |
Q |
| |
|
||||||||||||||||||||||||| | |||| | ||||| ||||||||||||||| | || |||||||||| || ||||||||| ||| || | |
|
|
| T |
3492 |
gttcttcagcagcttgtatggtaaatggcatgtaacaatcagcgactatgcaagtaacttgtggaacaagaccagcagtggcagagtcatgaagtttaac |
3393 |
T |
|
| Q |
238 |
aagaagttcgcggaaaggttgtaggaagttctttctgattgatttacaaagagcgtgtatgtcttgactaacatcgccatcac |
320 |
Q |
| |
|
||||||||| ||| || || | ||| ||| |||| || |||| | ||||| | ||||||||||| ||||||| ||||||| |
|
|
| T |
3392 |
aagaagttcattgaagggctgaaagaaattcgttcttatagattgaacaagagagggtatgtcttgagtaacatcaccatcac |
3310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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