View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10161_high_15 (Length: 292)
Name: NF10161_high_15
Description: NF10161
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10161_high_15 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 18 - 292
Target Start/End: Original strand, 2017242 - 2017516
Alignment:
| Q |
18 |
ggtctatatctagtttctttggtctcaaatttgtgtcaaggtagattcctaactgaactatacaccatttgtatctaaaagagcatttgtccttaacaaa |
117 |
Q |
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| T |
2017242 |
ggtctatatctagtttctttggtctcaaatttgtgtcaaggtagattcctaactgaactatacaccatttgtatctaaaagagcatttgtccttaacaaa |
2017341 |
T |
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| Q |
118 |
gaaaataattcagattagtctaaagggcatgtgcaactcgacaatgcaaaacaatatcagcataagcttgtgatgatcatagtctaaatatctaaaaggc |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2017342 |
gaaaataattcagattagtctaaagggcatgtgcaactcgacaatgcaaaacaatatcagcataagcttgtgatgatcatagtctaaatatctaaaaggc |
2017441 |
T |
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| Q |
218 |
cagagtcaaaatcactatacaaggtgaatgctgtatatagaaattcagatatgataaatcatgacattacaaaac |
292 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
2017442 |
cagagtcaaaatcactatacaaggtgaatgctgtatatagaaattcagatatgataaatcatgccattacaaaac |
2017516 |
T |
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