View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10161_low_10 (Length: 420)

Name: NF10161_low_10
Description: NF10161
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10161_low_10
NF10161_low_10
[»] chr4 (45 HSPs)
chr4 (221-408)||(43143584-43143771)
chr4 (221-408)||(42333776-42333963)
chr4 (224-408)||(30216742-30216926)
chr4 (224-408)||(3292896-3293080)
chr4 (224-408)||(6690235-6690419)
chr4 (224-406)||(50205079-50205261)
chr4 (221-408)||(25930688-25930875)
chr4 (224-390)||(10352902-10353068)
chr4 (224-408)||(28877250-28877434)
chr4 (221-396)||(20129290-20129465)
chr4 (224-408)||(48989311-48989495)
chr4 (258-408)||(44156668-44156818)
chr4 (221-396)||(26439291-26439466)
chr4 (221-396)||(34407296-34407471)
chr4 (241-408)||(36382346-36382512)
chr4 (219-396)||(47500751-47500928)
chr4 (221-405)||(29319708-29319892)
chr4 (221-396)||(13012168-13012343)
chr4 (265-408)||(35545977-35546120)
chr4 (224-408)||(29995983-29996167)
chr4 (221-396)||(43355884-43356059)
chr4 (251-408)||(17511233-17511391)
chr4 (224-395)||(26448036-26448206)
chr4 (224-405)||(40528996-40529179)
chr4 (219-390)||(30077649-30077819)
chr4 (296-408)||(6235575-6235687)
chr4 (230-367)||(30109945-30110084)
chr4 (221-367)||(48129950-48130087)
chr4 (276-408)||(1817752-1817884)
chr4 (319-396)||(13392893-13392970)
chr4 (319-396)||(13396032-13396109)
chr4 (224-341)||(45194159-45194276)
chr4 (224-326)||(27363344-27363446)
chr4 (221-282)||(7769308-7769369)
chr4 (224-278)||(49908782-49908836)
chr4 (266-334)||(6254569-6254637)
chr4 (224-278)||(5517494-5517548)
chr4 (3-125)||(17249248-17249370)
chr4 (224-277)||(6212029-6212082)
chr4 (224-277)||(17554979-17555032)
chr4 (224-289)||(13392989-13393054)
chr4 (224-289)||(13396128-13396193)
chr4 (225-326)||(20113775-20113876)
chr4 (225-278)||(50720476-50720529)
chr4 (219-277)||(12680193-12680251)
[»] chr3 (20 HSPs)
chr3 (221-408)||(11018212-11018399)
chr3 (224-408)||(45182964-45183148)
chr3 (221-408)||(6503569-6503756)
chr3 (224-408)||(6930894-6931078)
chr3 (224-408)||(33040936-33041120)
chr3 (221-408)||(27935158-27935345)
chr3 (241-408)||(34084122-34084289)
chr3 (221-396)||(6269438-6269613)
chr3 (224-390)||(19565519-19565685)
chr3 (241-396)||(19390146-19390301)
chr3 (221-396)||(22968456-22968631)
chr3 (221-396)||(39771770-39771945)
chr3 (224-390)||(45335858-45336023)
chr3 (224-408)||(35514249-35514429)
chr3 (254-408)||(40081741-40081893)
chr3 (263-367)||(5135291-5135397)
chr3 (224-278)||(6890981-6891035)
chr3 (224-341)||(5354692-5354809)
chr3 (225-298)||(22922141-22922214)
chr3 (360-408)||(22922214-22922262)
[»] chr8 (16 HSPs)
chr8 (221-408)||(34136825-34137012)
chr8 (221-408)||(4403988-4404175)
chr8 (224-408)||(23402091-23402275)
chr8 (239-408)||(16788025-16788194)
chr8 (224-408)||(29728386-29728570)
chr8 (255-408)||(3648794-3648947)
chr8 (241-405)||(15838286-15838449)
chr8 (224-408)||(2729196-2729380)
chr8 (228-408)||(36408538-36408718)
chr8 (263-395)||(9877242-9877374)
chr8 (221-396)||(39914495-39914669)
chr8 (257-367)||(3435285-3435397)
chr8 (273-408)||(42230971-42231104)
chr8 (228-326)||(10397122-10397220)
chr8 (264-334)||(40470567-40470637)
chr8 (316-375)||(376459-376519)
[»] chr5 (33 HSPs)
chr5 (224-408)||(31680350-31680534)
chr5 (224-408)||(12278860-12279044)
chr5 (224-408)||(17332551-17332735)
chr5 (224-408)||(31501716-31501900)
chr5 (221-408)||(37254621-37254808)
chr5 (255-408)||(33430335-33430488)
chr5 (224-405)||(10033910-10034091)
chr5 (224-408)||(13817960-13818144)
chr5 (1-135)||(41369689-41369823)
chr5 (221-390)||(36293639-36293808)
chr5 (241-405)||(39657509-39657673)
chr5 (221-396)||(39434676-39434851)
chr5 (219-396)||(26283330-26283507)
chr5 (259-396)||(16155015-16155152)
chr5 (243-407)||(1776377-1776541)
chr5 (271-405)||(16333879-16334013)
chr5 (220-390)||(3155649-3155819)
chr5 (243-408)||(19985941-19986106)
chr5 (224-408)||(36291354-36291538)
chr5 (260-408)||(43068896-43069044)
chr5 (254-367)||(28801300-28801415)
chr5 (224-326)||(202622-202724)
chr5 (3-91)||(41324312-41324400)
chr5 (3-90)||(31225166-31225253)
chr5 (17-90)||(31178529-31178602)
chr5 (224-271)||(26543902-26543949)
chr5 (3-90)||(31188560-31188647)
chr5 (30-93)||(41337150-41337213)
chr5 (3-93)||(41332221-41332311)
chr5 (3-76)||(41328225-41328298)
chr5 (50-90)||(41286280-41286320)
chr5 (48-160)||(41366334-41366446)
chr5 (3-91)||(41316243-41316331)
[»] chr2 (23 HSPs)
chr2 (224-408)||(45418566-45418750)
chr2 (224-407)||(8147334-8147518)
chr2 (224-408)||(44084603-44084787)
chr2 (224-405)||(8059336-8059517)
chr2 (220-405)||(42439965-42440150)
chr2 (224-407)||(770977-771165)
chr2 (244-396)||(41251646-41251798)
chr2 (221-405)||(35962695-35962879)
chr2 (259-408)||(12756837-12756986)
chr2 (241-408)||(31581622-31581789)
chr2 (219-396)||(17445053-17445228)
chr2 (221-405)||(32127144-32127328)
chr2 (221-396)||(6403816-6403991)
chr2 (244-405)||(16405603-16405764)
chr2 (221-405)||(18981597-18981780)
chr2 (219-378)||(2958131-2958289)
chr2 (260-408)||(26162702-26162847)
chr2 (266-405)||(2285887-2286026)
chr2 (239-355)||(26237955-26238071)
chr2 (228-367)||(4555250-4555390)
chr2 (250-367)||(7072589-7072710)
chr2 (224-271)||(34523223-34523270)
chr2 (261-320)||(34905969-34906028)
[»] chr7 (22 HSPs)
chr7 (221-408)||(34389056-34389243)
chr7 (224-408)||(37002144-37002328)
chr7 (218-408)||(43184468-43184658)
chr7 (224-408)||(26624728-26624913)
chr7 (221-405)||(5555467-5555651)
chr7 (224-406)||(8867733-8867915)
chr7 (250-408)||(35090177-35090335)
chr7 (221-405)||(3114099-3114283)
chr7 (224-408)||(33685547-33685731)
chr7 (224-408)||(7002708-7002892)
chr7 (224-408)||(7048579-7048763)
chr7 (220-396)||(14777119-14777295)
chr7 (241-408)||(36630816-36630983)
chr7 (260-408)||(40920003-40920151)
chr7 (241-408)||(8394125-8394292)
chr7 (264-407)||(38638237-38638380)
chr7 (259-408)||(36658199-36658348)
chr7 (300-367)||(10868514-10868583)
chr7 (228-331)||(26502797-26502899)
chr7 (228-331)||(26589815-26589917)
chr7 (239-286)||(10876829-10876876)
chr7 (225-277)||(37966614-37966666)
[»] chr6 (16 HSPs)
chr6 (219-408)||(28996708-28996897)
chr6 (241-408)||(18339106-18339273)
chr6 (221-405)||(34948761-34948945)
chr6 (221-405)||(13837801-13837985)
chr6 (224-390)||(29743266-29743432)
chr6 (219-396)||(398595-398772)
chr6 (257-408)||(33229336-33229487)
chr6 (225-326)||(24697899-24698000)
chr6 (227-337)||(31028435-31028545)
chr6 (219-277)||(13646995-13647053)
chr6 (225-326)||(24695472-24695572)
chr6 (224-277)||(34385519-34385572)
chr6 (227-278)||(2753336-2753387)
chr6 (256-319)||(3050094-3050157)
chr6 (224-278)||(21149331-21149385)
chr6 (269-318)||(24072576-24072625)
[»] chr1 (15 HSPs)
chr1 (221-408)||(35907532-35907719)
chr1 (224-407)||(17445296-17445479)
chr1 (220-405)||(7433424-7433609)
chr1 (221-396)||(26144235-26144410)
chr1 (224-408)||(3828967-3829150)
chr1 (224-408)||(42310941-42311125)
chr1 (224-408)||(321377-321561)
chr1 (241-388)||(32982076-32982223)
chr1 (224-367)||(41972314-41972458)
chr1 (224-367)||(33489670-33489815)
chr1 (220-347)||(23313217-23313345)
chr1 (219-277)||(44352614-44352672)
chr1 (224-278)||(31866960-31867014)
chr1 (224-306)||(48901207-48901288)
chr1 (260-326)||(35951427-35951493)
[»] scaffold0502 (1 HSPs)
scaffold0502 (241-408)||(5230-5397)
[»] scaffold0154 (1 HSPs)
scaffold0154 (224-408)||(31463-31647)
[»] scaffold0041 (1 HSPs)
scaffold0041 (260-408)||(52944-53092)
[»] scaffold0069 (1 HSPs)
scaffold0069 (221-396)||(17822-17997)
[»] scaffold0002 (1 HSPs)
scaffold0002 (221-396)||(480469-480644)
[»] scaffold2142 (1 HSPs)
scaffold2142 (221-396)||(502-677)
[»] scaffold0769 (1 HSPs)
scaffold0769 (224-271)||(1260-1307)
[»] scaffold0012 (1 HSPs)
scaffold0012 (234-332)||(194021-194118)


Alignment Details
Target: chr4 (Bit Score: 184; Significance: 2e-99; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 221 - 408
Target Start/End: Complemental strand, 43143771 - 43143584
Alignment:
Q  221 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 320  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43143771 catgggcggtttcaccgtccgacgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 43143672  T
Q  321 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43143671 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 43143584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 221 - 408
Target Start/End: Complemental strand, 42333963 - 42333776
Alignment:
Q  221 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 320  Q
    ||||| |||||||||||||| |||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42333963 catggacggtttcaccgtccagcgatcccgggcggtcgtccgggctcaatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 42333864  T
Q  321 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  42333863 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgataagttcatctc 42333776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 224 - 408
Target Start/End: Complemental strand, 30216926 - 30216742
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  30216926 gggcggattcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacccaaaagctaattaacacacttacaa 30216827  T
Q  324 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||| |||||||||||    
T  30216826 aaagaaaaatttgggcaatctgaaaattctcacatgcaaatagatctcggaattttatttagcacactattgacgggttcatctc 30216742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 224 - 408
Target Start/End: Complemental strand, 3293080 - 3292896
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    |||||||||||||| || | |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  3293080 gggcggtttcaccgcccagtgaccccgggcggtcgcccgggctcgatcgataatttttgcccattagacccaacccaaaagccaattaacacacttacaa 3292981  T
Q  324 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||    
T  3292980 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 3292896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 224 - 408
Target Start/End: Complemental strand, 6690419 - 6690235
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  6690419 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaa 6690320  T
Q  324 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||| ||||    
T  6690319 aaagaaaaatttgggcaaactgaaaattctcacacgcaaataggtctcgaaattttatttagcacactattgacgggttcgtctc 6690235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 224 - 406
Target Start/End: Complemental strand, 50205261 - 50205079
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  50205261 gggcggtttcaccgtccggcgatcccgggcggtcgcccgagctcgatcgataatttttgcacattagatccaacccaaaagccaattaacacacttacaa 50205162  T
Q  324 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatc 406  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||    
T  50205161 aaagaaaaaattggacaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatc 50205079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 221 - 408
Target Start/End: Original strand, 25930688 - 25930875
Alignment:
Q  221 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 320  Q
    |||||||||||  |||||  |||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||| |||    
T  25930688 catgggcggttctaccgtatggcgaccctgggcggtcgcccgggctcgatctataatttttgcacattaaactcaacccaaaagcccattaacacattta 25930787  T
Q  321 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    |||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||    
T  25930788 caaaaagaaaaatttgggcaatttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 25930875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 224 - 390
Target Start/End: Complemental strand, 10353068 - 10352902
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||| ||||| | ||||||||| ||||||    
T  10353068 gggcggtttcaccgtccggcgacccctggcggtcgcccgggctcaatcgataatttttgcacattagacccaaccaaaaagtccattaacacatttacaa 10352969  T
Q  324 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacac 390  Q
    || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10352968 aaggaaaaatttgggcaatctgaaaattcttacacgcaaataggtctcggaattttatttagcacac 10352902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 224 - 408
Target Start/End: Complemental strand, 28877434 - 28877250
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    ||||||||||||||||||  ||||||| ||||||||  ||||| |||||||||||||||||||||||| |||||| |||||| ||||||||| |||| ||    
T  28877434 gggcggtttcaccgtccgatgaccccgtgcggtcgcttgggctagatcgataatttttgcacattagattcaacctaaaagctaattaacacgcttataa 28877335  T
Q  324 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  28877334 aaagaaaaatttgggaaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgatgggttcatctc 28877250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 221 - 396
Target Start/End: Original strand, 20129290 - 20129465
Alignment:
Q  221 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 320  Q
    ||||||||||| ||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||    
T  20129290 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 20129389  T
Q  321 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 396  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||||  ||||||||||| |||||| |||||    
T  20129390 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttagaattttatttggcacactattga 20129465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 224 - 408
Target Start/End: Original strand, 48989311 - 48989495
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    |||| ||||||||| ||| |||| ||||||||||  ||||| |||||||||||||||||||||||| || |||| |||||| | ||||||||||||||||    
T  48989311 gggcagtttcaccgcccgacgactccgggcggtcaaccgggttcgatcgataatttttgcacattaaacccaactcaaaagtccattaacacacttacaa 48989410  T
Q  324 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  48989411 aaagaaaaatttgggcaatctgaaaattctcatacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 48989495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 258 - 408
Target Start/End: Original strand, 44156668 - 44156818
Alignment:
Q  258 gcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcaca 357  Q
    |||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||    
T  44156668 gcccgggctcaaccgataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaattttggacaatctgaaaattctctca 44156767  T
Q  358 cgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  44156768 cgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 44156818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 221 - 396
Target Start/End: Complemental strand, 26439466 - 26439291
Alignment:
Q  221 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 320  Q
    ||||||||||| ||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||    
T  26439466 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacattta 26439367  T
Q  321 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 396  Q
     |||||||||||||||||||||||||||||| ||||||| |||||||||| | ||||||||||  ||||| |||||    
T  26439366 taaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattga 26439291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 221 - 396
Target Start/End: Complemental strand, 34407471 - 34407296
Alignment:
Q  221 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 320  Q
    ||||||||||| ||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||    
T  34407471 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacattta 34407372  T
Q  321 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 396  Q
     |||||||||||||||||||||||||||||| ||||||| |||||||||| | ||||||||||  ||||| |||||    
T  34407371 taaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattga 34407296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 241 - 408
Target Start/End: Complemental strand, 36382512 - 36382346
Alignment:
Q  241 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 340  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||| | ||||||||| |||||||| ||||||||||| ||    
T  36382512 ggcgaccccgggcggtcgcccgggctcgatccataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaa-gaaaaatttggaca 36382414  T
Q  341 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||    
T  36382413 atctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 36382346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 219 - 396
Target Start/End: Original strand, 47500751 - 47500928
Alignment:
Q  219 aacatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacact 318  Q
    ||||||||||||| ||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||| |    
T  47500751 aacatgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatt 47500850  T
Q  319 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 396  Q
    ||  |||||||||||||||||||| |||||||| ||||||| |||||||||| |||||||||||| |||||| |||||    
T  47500851 tatgaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattga 47500928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 221 - 405
Target Start/End: Complemental strand, 29319892 - 29319708
Alignment:
Q  221 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 320  Q
    |||||||||||  |||||  || |||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||| || ||||||||| |||    
T  29319892 catgggcggttctaccgtatggtgacccctggcggtcgtccaggctcgatcgataatttttgcacattagactcaacccaaaatcccattaacacattta 29319793  T
Q  321 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcat 405  Q
    |||||||||||||||| |||||||||||||| |||||| |||||| |||| ||||||||||||||||||| ||||| ||||||||    
T  29319792 caaaaagaaaaatttgagcaatctgaaaattgtcacacacaaataagtcttggaattttatttagcacactattgacgggttcat 29319708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 221 - 396
Target Start/End: Original strand, 13012168 - 13012343
Alignment:
Q  221 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 320  Q
    ||||||||||| ||||||   |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||  ||||||||| |||    
T  13012168 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagattcaaccaaaaagctcattaacacattta 13012267  T
Q  321 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 396  Q
     ||||||||||||||||||||| |||||||| ||||||| |||||||||| |||||||||||| |||||| |||||    
T  13012268 taaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattga 13012343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 265 - 408
Target Start/End: Original strand, 35545977 - 35546120
Alignment:
Q  265 ctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaat 364  Q
    ||||||||| ||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  35545977 ctcgatcgacaatttttgcgcatcagacccaacccaaaagccaattaacacacttacaaaaagaaaattttgggcaatctgaaaattctcacacgcaaat 35546076  T
Q  365 aggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
     |||||| |||||||||||||||||| |||||||||||||||||    
T  35546077 gggtctctgaattttatttagcacactattgatgggttcatctc 35546120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 224 - 408
Target Start/End: Complemental strand, 29996167 - 29995983
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    |||||||||||||| ||| ||| ||||| |||||| |||| |||||||||||||||||| ||||||||||||||| ||||| | ||||||||| |||| |    
T  29996167 gggcggtttcaccgcccgacgatcccggacggtcgtccggactcgatcgataatttttgtacattagactcaaccaaaaagtccattaacacatttacga 29996068  T
Q  324 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    ||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||| ||||||| ||||| || ||||||||    
T  29996067 aaagaaaaatttgggcaatctgaaaattcttgcacgcaaatagttctcggaattttattaagcacactattgacggattcatctc 29995983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 221 - 396
Target Start/End: Original strand, 43355884 - 43356059
Alignment:
Q  221 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 320  Q
    ||||||||||| ||||||   |||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||    
T  43355884 catgggcggttccaccgtgtagcgaccccaggcagtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacattta 43355983  T
Q  321 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 396  Q
     |||||||||||||||||||||||||||||| ||||||| |||||||||| | ||||||||||  ||||| |||||    
T  43355984 taaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattga 43356059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 251 - 408
Target Start/End: Complemental strand, 17511391 - 17511233
Alignment:
Q  251 ggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaat 350  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||    
T  17511391 ggcggtcgcccagactcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatttgaaaat 17511292  T
Q  351 tctcacacgcaaataggtctcgg-aattttatttagcacacaattgatgggttcatctc 408  Q
    | | |||||||||||||||| || ||||||||||||||||  |||||| ||||||||||    
T  17511291 tgttacacgcaaataggtcttggaaattttatttagcacattattgatcggttcatctc 17511233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 224 - 395
Target Start/End: Original strand, 26448036 - 26448206
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    |||||||||||||| |||||||| ||| ||| ||| |||| ||||||||||||||||||||||||| |   |||||||||| | ||||||||||||||||    
T  26448036 gggcggtttcaccgcccggcgactccgtgcgatcgtccggactcgatcgataatttttgcacattaaatctaacccaaaagtccattaacacacttacaa 26448135  T
Q  324 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattg 395  Q
    ||| |||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||| ||||    
T  26448136 aaa-aaaaatttgggcaatctgaaaattctcatacacaaataggtttcggaattttatttagcacactattg 26448206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 224 - 405
Target Start/End: Original strand, 40528996 - 40529179
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcg--gtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttac 321  Q
    ||||||||  |||||  |||||||| |||||  |||| |||| ||||||||||||||||||||||||| |||||||| |||| |  ||||||||| ||||    
T  40528996 gggcggttctaccgtatggcgaccctgggcgaggtcgtccggactcgatcgataatttttgcacattaaactcaacctaaaaactcattaacacatttac 40529095  T
Q  322 aaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcat 405  Q
    |||||||||||||||| |||| |||||||| ||||| |||||||||||| ||||||||||||||||||| ||||| ||||||||    
T  40529096 aaaaagaaaaatttggacaatttgaaaattgtcacatgcaaataggtcttggaattttatttagcacactattgacgggttcat 40529179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 219 - 390
Target Start/End: Complemental strand, 30077819 - 30077649
Alignment:
Q  219 aacatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacact 318  Q
    |||| |||||||||||||| ||| ||||| ||||||||||||| ||||| |||||||| ||||||||||||||| ||||| |||||   ||||||||| |    
T  30077819 aacaggggcggtttcaccgcccg-cgacctcgggcggtcgcccaggctcaatcgataaattttgcacattagacccaaccaaaaagttcattaacacatt 30077721  T
Q  319 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacac 390  Q
    ||||||||||||||||||| ||||||||||||| | |||| ||||||||||| | |||||||||||||||||    
T  30077720 tacaaaaagaaaaatttggacaatctgaaaatttttacacacaaataggtcttgaaattttatttagcacac 30077649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 296 - 408
Target Start/End: Original strand, 6235575 - 6235687
Alignment:
Q  296 acccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattg 395  Q
    ||||||||| | ||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||| ||||    
T  6235575 acccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattg 6235674  T
Q  396 atgggttcatctc 408  Q
    | |||||||||||    
T  6235675 acgggttcatctc 6235687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 230 - 367
Target Start/End: Original strand, 30109945 - 30110084
Alignment:
Q  230 tttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaa 329  Q
    |||||||| ||| ||||||||| ||||||||||| |||||||||||||||||||||||||||| ||| || |||| | ||||||||||||||||||||||    
T  30109945 tttcaccgcccgacgaccccggacggtcgcccggactcgatcgataatttttgcacattagacccaaacccaaagaccattaacacacttacaaaaagaa 30110044  T
Q  330 aaatttgggc--aatctgaaaattctcacacgcaaatagg 367  Q
    |||||||| |  ||| |||||| |||||||||||||||||    
T  30110045 aaatttggacaaaatatgaaaaatctcacacgcaaatagg 30110084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 221 - 367
Target Start/End: Original strand, 48129950 - 48130087
Alignment:
Q  221 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 320  Q
    |||||||||||| |||| |||||||||     |||||| ||||||||||||||||||||||||| ||||||| ||||||||||||  |||||||||||||    
T  48129950 catgggcggtttaaccgcccggcgacc----tcggtcgaccgggctcgatcgataatttttgcatattagacccaacccaaaagctcattaacacactta 48130045  T
Q  321 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaatagg 367  Q
    ||||||||||||||||||     |||||| |||||||||||||||||    
T  48130046 caaaaagaaaaatttggg-----tgaaaactctcacacgcaaatagg 48130087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 276 - 408
Target Start/End: Original strand, 1817752 - 1817884
Alignment:
Q  276 atttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaa 375  Q
    ||||||||||||||||  ||| ||||||| | ||||| ||| ||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||    
T  1817752 atttttgcacattagatccaatccaaaagtccattaatacatttataaaaagaaaaatttgggcaatctaaaaattcttacacgcaaataggtctcggaa 1817851  T
Q  376 ttttatttagcacacaattgatgggttcatctc 408  Q
    ||||||||| ||||| ||||  || ||||||||    
T  1817852 ttttatttaacacactattgtcggattcatctc 1817884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 319 - 396
Target Start/End: Complemental strand, 13392970 - 13392893
Alignment:
Q  319 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 396  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  13392970 tacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcgaaattttatttagcacactattga 13392893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 319 - 396
Target Start/End: Complemental strand, 13396109 - 13396032
Alignment:
Q  319 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 396  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  13396109 tacaaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcgaaattttatttagcacactattga 13396032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 224 - 341
Target Start/End: Original strand, 45194159 - 45194276
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    |||| ||||||||| ||| ||||||| |||| | |||||| ||||||| ||||||||||||||||| |||||||||||||| | ||||||||||||||||    
T  45194159 gggcagtttcaccgcccgacgaccccaggcgattgcccggactcgatcaataatttttgcacattaaactcaacccaaaagtccattaacacacttacaa 45194258  T
Q  324 aaagaaaaatttgggcaa 341  Q
    ||| ||||  ||||||||    
T  45194259 aaaaaaaatattgggcaa 45194276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 224 - 326
Target Start/End: Original strand, 27363344 - 27363446
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    ||||||||| |||||  ||||||| |||||||||||||||||||||||||   |||||||| ||||| | ||||||||||||| ||||||||||||||||    
T  27363344 gggcggttttaccgtatggcgacctcgggcggtcgcccgggctcgatcgaatttttttgcatattaggcccaacccaaaagcccattaacacacttacaa 27363443  T
Q  324 aaa 326  Q
    |||    
T  27363444 aaa 27363446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 221 - 282
Target Start/End: Original strand, 7769308 - 7769369
Alignment:
Q  221 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttg 282  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  7769308 catgggcggtttcaccgtccggcgaccccaggcggtcgcccgggctcgatcgataatttttg 7769369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 224 - 278
Target Start/End: Complemental strand, 49908836 - 49908782
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatt 278  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  49908836 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatt 49908782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 266 - 334
Target Start/End: Original strand, 6254569 - 6254637
Alignment:
Q  266 tcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatt 334  Q
    |||||||||||||||||||||||| || ||||||||||| |||||||||||||| |||||| |||||||    
T  6254569 tcgatcgataatttttgcacattaaacccaacccaaaagacaattaacacacttgcaaaaaaaaaaatt 6254637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 224 - 278
Target Start/End: Complemental strand, 5517548 - 5517494
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatt 278  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  5517548 gggcggtttcaccgcccggcgaccccgggcggtcgcctgggctcgatcgataatt 5517494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 125
Target Start/End: Original strand, 17249248 - 17249370
Alignment:
Q  3 tgaagtttttccattttggtctttgccctactcaccctttgaactattttaatagaaggatacaaatcagcaatgcaaaatcctcccaataactttattg 102  Q
    |||||||||||||||||||| ||  ||  ||| ||||||| || |||||| |||||||||||||||||| |||| |||||||||||||| ||  | | |     
T  17249248 tgaagtttttccattttggttttcacctgacttacccttttaagtattttgatagaaggatacaaatcaacaatacaaaatcctcccaacaaactcacta 17249347  T
Q  103 attcctccattgctgatttgaac 125  Q
     |||||| |||||||||||||||    
T  17249348 tttcctctattgctgatttgaac 17249370  T

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Target: chr4; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 224 - 277
Target Start/End: Complemental strand, 6212082 - 6212029
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataat 277  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  6212082 gggcggtttcaccgtccggcgacctcgggcggtcgcccgagctcgatcgataat 6212029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 224 - 277
Target Start/End: Original strand, 17554979 - 17555032
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataat 277  Q
    |||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  17554979 gggcggtttcaccgtccgacgaccccgggtggtcgcccgggctcgatcgataat 17555032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 289
Target Start/End: Complemental strand, 13393054 - 13392989
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacatta 289  Q
    |||||||||||||| || |||||||||| ||||||||||||||| |||||| | ||||||| ||||    
T  13393054 gggcggtttcaccgcccagcgaccccggacggtcgcccgggctcaatcgatgacttttgcatatta 13392989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 289
Target Start/End: Complemental strand, 13396193 - 13396128
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacatta 289  Q
    |||||||||||||| || |||||||||| ||||||||||||||| |||||| | ||||||| ||||    
T  13396193 gggcggtttcaccgcccagcgaccccggacggtcgcccgggctcaatcgatgacttttgcatatta 13396128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 326
Target Start/End: Original strand, 20113775 - 20113876
Alignment:
Q  225 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaa 324  Q
    ||||||| ||||| | ||||||||||| |  |||||||  ||| ||||||||||| |  |||||||  |||||||||||||| ||||||||||||| |||    
T  20113775 ggcggttccaccgcctggcgaccccggacactcgcccgaactcaatcgataatttctttacattaggttcaacccaaaagccgattaacacacttaaaaa 20113874  T
Q  325 aa 326  Q
    ||    
T  20113875 aa 20113876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 278
Target Start/End: Complemental strand, 50720529 - 50720476
Alignment:
Q  225 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatt 278  Q
    ||||||||||||| ||||||||| ||||||||||||||||||| ||| ||||||    
T  50720529 ggcggtttcaccgcccggcgacctcgggcggtcgcccgggctcaatcaataatt 50720476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 219 - 277
Target Start/End: Complemental strand, 12680251 - 12680193
Alignment:
Q  219 aacatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataat 277  Q
    |||| |||||||||||||| || || ||||| |||||| ||||||||||||||||||||    
T  12680251 aacaggggcggtttcaccgcccagcaaccccaggcggtggcccgggctcgatcgataat 12680193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 172; Significance: 3e-92; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 221 - 408
Target Start/End: Complemental strand, 11018399 - 11018212
Alignment:
Q  221 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 320  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11018399 catgggcggtttcaccgtccggcgactccgggcggtcgcccaggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 11018300  T
Q  321 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  11018299 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcagaattttatttagcacacaattgacgggttcatctc 11018212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 224 - 408
Target Start/End: Original strand, 45182964 - 45183148
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  45182964 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaa 45183063  T
Q  324 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  45183064 aaagaaaaatttgggcaatctgaaaattctcacacacaaataggtctcggaattttatttagcacactattgacgggttcatctc 45183148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 221 - 408
Target Start/End: Complemental strand, 6503756 - 6503569
Alignment:
Q  221 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 320  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||    
T  6503756 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgattatttttgcaaattagactcaacccaaaagccaattagcacactta 6503657  T
Q  321 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    |||||||||||||||  |||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  6503656 caaaaagaaaaatttaagcaatctgaaaattctcacaggcaaataggtctcggatttttatttagcacacaattgatgggttcatctc 6503569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 224 - 408
Target Start/End: Complemental strand, 6931078 - 6930894
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||| ||||||    
T  6931078 gggcggtttcaccgcccggcgaccccggacggtcgcccgggctcgatcgataatttttgcgcattagatccaacccaaaagccaattaacacatttacaa 6930979  T
Q  324 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||    
T  6930978 aaagaaaaatttaggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 6930894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 224 - 408
Target Start/End: Original strand, 33040936 - 33041120
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||| ||||||| |||||||||||| |||||||||||||||||    
T  33040936 gggcggtttcaccgcccggcgaccccgggcggtcgctcgggctcgattgataatttttgcatattagacccaacccaaaagctaattaacacacttacaa 33041035  T
Q  324 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    |||||||||||||  |||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  33041036 aaagaaaaatttgaacaatttgaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 33041120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 221 - 408
Target Start/End: Original strand, 27935158 - 27935345
Alignment:
Q  221 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 320  Q
    |||||| |||||||||| | ||| |||| |||| ||||||||||||||||||||||||||||||||||| || ||||||||||||  |||||||||||||    
T  27935158 catgggtggtttcaccgcctggcaaccctgggcagtcgcccgggctcgatcgataatttttgcacattaaacccaacccaaaagctcattaacacactta 27935257  T
Q  321 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| || ||||| |||||||||||    
T  27935258 caaaaagaaaaatttgggcaatctgaaaattctcatacgaaaataggtctcggaattttatttagcatactattgacgggttcatctc 27935345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 241 - 408
Target Start/End: Complemental strand, 34084289 - 34084122
Alignment:
Q  241 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 340  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||| ||||| | ||||||||| |||||||||||||||||||||||    
T  34084289 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattaaattcaaccaaaaagtccattaacacatttacaaaaagaaaaatttgggca 34084190  T
Q  341 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    || |||||||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  34084189 atatgaaaattatcacacgcaaataggtcttggaattttatttagcacactattgatgggttcatctc 34084122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 221 - 396
Target Start/End: Complemental strand, 6269613 - 6269438
Alignment:
Q  221 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 320  Q
    |||||||||||  |||||   |||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||    
T  6269613 catgggcggttctaccgtgtagcgatcccgggcggtcgtccggactcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 6269514  T
Q  321 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 396  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||| |||||    
T  6269513 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattga 6269438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 224 - 390
Target Start/End: Complemental strand, 19565685 - 19565519
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    |||||||||||||| ||||||| |||||||||||||||||| || |||||||||||||||||||||||| ||||| ||||  | ||||||||| ||||||    
T  19565685 gggcggtttcaccgcccggcgatcccgggcggtcgcccgggttcaatcgataatttttgcacattagacccaaccaaaaaatccattaacacatttacaa 19565586  T
Q  324 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacac 390  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19565585 aaagaaaaatttggacaatctgaaaattcttacacgcaaataggtctcggaattttatttagcacac 19565519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 241 - 396
Target Start/End: Original strand, 19390146 - 19390301
Alignment:
Q  241 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 340  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||| | ||||||||| |||||||||||||||||||||||    
T  19390146 ggcgaccccgggcggtcgtccgggttcgatcgataatttttgcacattagactcaacctaaaagtctattaacacatttacaaaaagaaaaatttgggca 19390245  T
Q  341 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 396  Q
    ||||||||||| ||||||| |||||||||| ||||||||||||||||||| |||||    
T  19390246 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattga 19390301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 221 - 396
Target Start/End: Complemental strand, 22968631 - 22968456
Alignment:
Q  221 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 320  Q
    |||||||||||  |||||   ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| |||    
T  22968631 catgggcggttctaccgtgtagcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagacttaacccaaaagcccattaacacattta 22968532  T
Q  321 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 396  Q
    |||||||||||||||||||||||| |||||| ||||||| |||||||||| | ||||||||||||||||| |||||    
T  22968531 caaaaagaaaaatttgggcaatctaaaaattgtcacacgtaaataggtcttgaaattttatttagcacactattga 22968456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 221 - 396
Target Start/End: Original strand, 39771770 - 39771945
Alignment:
Q  221 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 320  Q
    ||||||||||| ||||||   ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||    
T  39771770 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacattta 39771869  T
Q  321 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 396  Q
     |||||||||||||||||||||||||||||| ||||||| |||||||||| | ||||||||||  ||||| |||||    
T  39771870 taaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattga 39771945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 224 - 390
Target Start/End: Original strand, 45335858 - 45336023
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    |||||||||||||| ||||||||| ||||||||||||||| ||| ||||||||||||| |||||||||| ||||| ||||| || |||||||| ||||||    
T  45335858 gggcggtttcaccgcccggcgacctcgggcggtcgcccggactcaatcgataatttttacacattagacccaaccaaaaagtca-ttaacacatttacaa 45335956  T
Q  324 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacac 390  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  45335957 aaagaaaaatctgggcaatctgaaaattcttacacgcaaataggtcttggaattttatttagcacac 45336023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 224 - 408
Target Start/End: Original strand, 35514249 - 35514429
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    |||| ||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||| | ||||  ||||||||||| | ||||||||||    ||    
T  35514249 gggcagtttcaccgcccggcgaccccggacggtcgtccgggctcgatcgataattttcgcatactagatccaacccaaaagtccattaacacac----aa 35514344  T
Q  324 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    |||||||||||||| |||| ||||||||||||| ||||||||||||| |||||||||||| |||||| ||||| |||||||||||    
T  35514345 aaagaaaaatttggacaatatgaaaattctcactcgcaaataggtctaggaattttattttgcacactattgacgggttcatctc 35514429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 254 - 408
Target Start/End: Complemental strand, 40081893 - 40081741
Alignment:
Q  254 ggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattct 353  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||||  ||||||||| ||||||||||||||||||||||||| |||||||| |    
T  40081893 ggtcgcccgggctcgatcgataatttttgaacattagactcaacc-aaaagctcattaacacatttacaaaaagaaaaatttgggcaatttgaaaattgt 40081795  T
Q  354 cacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    ||||||||||||| ||| || ||||| |||||||||| ||||| |||||||||||    
T  40081794 cacacgcaaatagatcttgg-attttttttagcacactattgacgggttcatctc 40081741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 263 - 367
Target Start/End: Original strand, 5135291 - 5135397
Alignment:
Q  263 ggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggc--aatctgaaaattctcacacgc 360  Q
    |||||||||||| ||||||| ||||||||| ||||| ||||||  |||||||||||||||||||||||||||||| |  |||| |||||||||||||| |    
T  5135291 ggctcgatcgattatttttgtacattagacccaacctaaaagctcattaacacacttacaaaaagaaaaatttggacaaaatccgaaaattctcacacac 5135390  T
Q  361 aaatagg 367  Q
    |||||||    
T  5135391 aaatagg 5135397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 224 - 278
Target Start/End: Original strand, 6890981 - 6891035
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatt 278  Q
    |||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  6890981 gggcggtttcaccgcccggcgacaccgggcggtcgcccgggctcgatcgataatt 6891035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 224 - 341
Target Start/End: Original strand, 5354692 - 5354809
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||  |||||||  ||||||||   ||||| | | ||| ||| ||||||||  ||    
T  5354692 gggcagtttcaccgcccggcgaccccgggcggtcgcccgggctcgatccttaattttctcacattaggtccaacctataggcccatttacacacttcaaa 5354791  T
Q  324 aaagaaaaatttgggcaa 341  Q
    ||| ||||| ||||||||    
T  5354792 aaaaaaaaaattgggcaa 5354809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 298
Target Start/End: Original strand, 22922141 - 22922214
Alignment:
Q  225 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacc 298  Q
    ||||||| ||||||  ||||| ||||||||||||| |||||||||||||| |||||||||||||| ||||||||    
T  22922141 ggcggttccaccgtatggcgatcccgggcggtcgctcgggctcgatcgatcatttttgcacattaaactcaacc 22922214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 360 - 408
Target Start/End: Original strand, 22922214 - 22922262
Alignment:
Q  360 caaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    ||||||| ||| ||||||||||||| ||||| ||||| |||||||||||    
T  22922214 caaatagatcttggaattttatttaacacactattgacgggttcatctc 22922262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 168; Significance: 7e-90; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 221 - 408
Target Start/End: Complemental strand, 34137012 - 34136825
Alignment:
Q  221 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 320  Q
    |||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  34137012 catgggtggtttcaccgtctggcgaccccgagcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagtcaattaacacactta 34136913  T
Q  321 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  34136912 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcgaaattttatttagcacacaattgatgggttcatctc 34136825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 221 - 408
Target Start/End: Original strand, 4403988 - 4404175
Alignment:
Q  221 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 320  Q
    ||||| ||||||||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4403988 catggacggtttcactggccggcgaccccaggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacatactta 4404087  T
Q  321 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4404088 caaaaagaaaaatttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 4404175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 224 - 408
Target Start/End: Original strand, 23402091 - 23402275
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||||    
T  23402091 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacacacttacaa 23402190  T
Q  324 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||  ||||||||||    
T  23402191 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcgaaattttatttaacacactattgactggttcatctc 23402275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 239 - 408
Target Start/End: Complemental strand, 16788194 - 16788025
Alignment:
Q  239 ccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttggg 338  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16788194 ccggcaaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttggg 16788095  T
Q  339 caatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    |||||| |||| |||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||    
T  16788094 caatcttaaaactctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 16788025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 224 - 408
Target Start/End: Complemental strand, 29728570 - 29728386
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    ||||||||  |||||  ||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||  ||||||||| ||||||    
T  29728570 gggcggttctaccgtatggcgaccccggacggtcgcccgtgctcgatcgataaattttgcacattagactcaacccaaaagctcattaacacatttacaa 29728471  T
Q  324 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||  |||||||||||||||||| ||||| |||||||||||    
T  29728470 aaagaaaaatttgggcaatctgaaaattgtgacacgcaaataggtcttcgaattttatttagcacactattgacgggttcatctc 29728386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 255 - 408
Target Start/End: Complemental strand, 3648947 - 3648794
Alignment:
Q  255 gtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctc 354  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||| ||    
T  3648947 gtcgcccgggctcgatcgataattttttcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaattttgggcaatctgaaaattgtc 3648848  T
Q  355 acacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    |||||||| ||||| | ||||||||||||||||||| ||||| |||||||||||    
T  3648847 acacgcaagtaggttttggaattttatttagcacactattgacgggttcatctc 3648794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 241 - 405
Target Start/End: Original strand, 15838286 - 15838449
Alignment:
Q  241 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 340  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||| ||||| | ||||||||| |||||||| ||||||||||||||    
T  15838286 ggcgaccccgggcggtcacccgggctcgattgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaa-gaaaaatttgggca 15838384  T
Q  341 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcat 405  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||| ||||||||    
T  15838385 atctgaaaattttcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat 15838449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 224 - 408
Target Start/End: Complemental strand, 2729380 - 2729196
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||| |  ||| ||||||||| ||||||||||||| ||    
T  2729380 gggcggtttcaccgcccggcgaccccgggcggacgcccgggctcgatcgataatttttacacattaaatccaatccaaaagcccattaacacacttataa 2729281  T
Q  324 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    |||||||  ||| |||||| |||||| ||||| |||||||||||||||  ||||||||||||||||| |||||||| ||||||||    
T  2729280 aaagaaattttttggcaatttgaaaactctcatacgcaaataggtctcaaaattttatttagcacactattgatggattcatctc 2729196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 228 - 408
Target Start/End: Original strand, 36408538 - 36408718
Alignment:
Q  228 ggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaag 327  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||| | ||||||||| ||||||||||    
T  36408538 ggtttcaccgcccggcgacctcgggcggtcgcccgggctcgatcgataatttttgcacattagatccaacccaaaagtccattaacacatttacaaaaag 36408637  T
Q  328 aaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    |||| ||| |||||| |||||||||| |||||| |||||||||| |||||||||||| ||||| ||||  || ||||||||    
T  36408638 aaaatttttggcaatttgaaaattcttacacgctaataggtctcagaattttatttaacacactattgccggattcatctc 36408718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 263 - 395
Target Start/End: Original strand, 9877242 - 9877374
Alignment:
Q  263 ggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaa 362  Q
    |||||||| |||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  9877242 ggctcgattgataatttttgcacattagacctaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacatgcaa 9877341  T
Q  363 ataggtctcggaattttatttagcacacaattg 395  Q
    |||||||||| ||||||||||||||||| ||||    
T  9877342 ataggtctcgaaattttatttagcacactattg 9877374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 221 - 396
Target Start/End: Original strand, 39914495 - 39914669
Alignment:
Q  221 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 320  Q
    ||||| ||||| ||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||| |||    
T  39914495 catggacggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta 39914594  T
Q  321 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 396  Q
     ||||| ||||||||||||||| |||||||| ||||| | |||||||||| |||||||||||| |||||| |||||    
T  39914595 taaaaa-aaaaatttgggcaatttgaaaattgtcacaagtaaataggtcttggaattttatttggcacactattga 39914669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 257 - 367
Target Start/End: Original strand, 3435285 - 3435397
Alignment:
Q  257 cgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggc--aatctgaaaattctc 354  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||  |||||||||||||||    
T  3435285 cgcccgggcttgatcgataatttttgcacattagacccaacccaaaaacccattaacacacttacaaaaagaaaaatttgggcaaaatctgaaaattctc 3435384  T
Q  355 acacgcaaatagg 367  Q
    | |||||||||||    
T  3435385 aaacgcaaatagg 3435397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 273 - 408
Target Start/End: Original strand, 42230971 - 42231104
Alignment:
Q  273 ataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcg 372  Q
    ||||||||||||||||| |  |||| |||||| | ||||||||  ||||||||||||||||||||||||| |||||||||||| | |||||||||||||     
T  42230971 ataatttttgcacattaaatccaactcaaaagtccattaacac--ttacaaaaagaaaaatttgggcaatttgaaaattctcatatgcaaataggtctca 42231068  T
Q  373 gaattttatttagcacacaattgatgggttcatctc 408  Q
    |||||||||||||||||| ||||| || ||||||||    
T  42231069 gaattttatttagcacactattgacggattcatctc 42231104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 228 - 326
Target Start/End: Complemental strand, 10397220 - 10397122
Alignment:
Q  228 ggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaa 326  Q
    |||| ||||| |||||||| ||||||  |||||||||||| ||||||||||| | ||||||||  |||||||||||||| ||||||||| ||| |||||    
T  10397220 ggttacaccgcccggcgactccgggcactcgcccgggctcaatcgataatttcttcacattaggttcaacccaaaagccgattaacacagttaaaaaaa 10397122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 264 - 334
Target Start/End: Complemental strand, 40470637 - 40470567
Alignment:
Q  264 gctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatt 334  Q
    ||||||||||||||||||||||||||||| |||  |||||| | ||||||||||||| ||||| |||||||    
T  40470637 gctcgatcgataatttttgcacattagacccaaatcaaaagtccattaacacacttataaaaaaaaaaatt 40470567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 316 - 375
Target Start/End: Original strand, 376459 - 376519
Alignment:
Q  316 acttacaaaaagaaaaatt-tgggcaatctgaaaattctcacacgcaaataggtctcggaa 375  Q
    ||||| ||||| ||||||| || | ||| |||||||||||||||||||| |||||||||||    
T  376459 acttaaaaaaaaaaaaattgtgcgaaatatgaaaattctcacacgcaaagaggtctcggaa 376519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 157; Significance: 2e-83; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 224 - 408
Target Start/End: Original strand, 31680350 - 31680534
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||    
T  31680350 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttccgcattagacccaacccaaaagccaattaacacacttacaa 31680449  T
Q  324 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  31680450 aaagaaaaatttgggcaatctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 31680534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 224 - 408
Target Start/End: Complemental strand, 12279044 - 12278860
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    |||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  12279044 gggcggtttcaccgcccggcgatcccgggcggtcgcccggactcgatcgataatttttgcacattagacccaacccaaaggccaattaacacacttacaa 12278945  T
Q  324 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||    
T  12278944 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacaggttcatctc 12278860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 224 - 408
Target Start/End: Complemental strand, 17332735 - 17332551
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  17332735 gggcggtttcaccgcccggcgaccccgggcgttcgcccgggctcgatcgataatttttgcatattagacccaacccaaaagccaattaacacacttacaa 17332636  T
Q  324 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| || ||||||||    
T  17332635 aaagaaaaatttgggcaatctgaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 17332551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 224 - 408
Target Start/End: Complemental strand, 31501900 - 31501716
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    |||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  31501900 gggcggtttcaccgcccggcgaccccgggcgattgcccgggctcgatcgataatttttgcacattagacccaacccaaaagccaattaacacacttacaa 31501801  T
Q  324 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||| |||||||||    
T  31501800 aaagaaaaatttgggcaatctgaaaattctcgcacgcaaataggtctcgaaattttatttagcacactattgatgagttcatctc 31501716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 221 - 408
Target Start/End: Original strand, 37254621 - 37254808
Alignment:
Q  221 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 320  Q
    |||||||||||||||||  |||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  37254621 catgggcggtttcaccgctcggcgaccccaggcggtcgcccaggctcgatcgataatttttgcacattagacccaacccaaaagtcaattaacacactta 37254720  T
Q  321 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| |||||||||||    
T  37254721 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgggttcatctc 37254808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 255 - 408
Target Start/End: Original strand, 33430335 - 33430488
Alignment:
Q  255 gtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctc 354  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33430335 gtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctc 33430434  T
Q  355 acacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    |||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  33430435 acacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 33430488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 224 - 405
Target Start/End: Original strand, 10033910 - 10034091
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    ||||||||  |||||  ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  10033910 gggcggttctaccgtatggcgaccccggacgatcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa 10034009  T
Q  324 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcat 405  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||| ||||||||    
T  10034010 aaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat 10034091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 224 - 408
Target Start/End: Original strand, 13817960 - 13818144
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    ||||||||  |||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||    
T  13817960 gggcggttctaccgtatggcgaccccgggcggtcgctcgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaa 13818059  T
Q  324 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||||||| ||||| ||| |||||||    
T  13818060 aaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaaatttatttagcacactattgacgggctcatctc 13818144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 41369823 - 41369689
Alignment:
Q  1 tctgaagtttttccattttggtctttgccctactcaccctttgaactattttaatagaaggatacaaatcagcaatgcaaaatcctcccaataactttat 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  41369823 tctgaagtttttccattttggtctttgccctacttaccctttgaagtattttaatagaaggatacaaatcagcaatgcaaaatccttccaataactttat 41369724  T
Q  101 tgattcctccattgctgatttgaactctaatatgt 135  Q
    |||||||||||||||||||||||||||||||||||    
T  41369723 tgattcctccattgctgatttgaactctaatatgt 41369689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 221 - 390
Target Start/End: Complemental strand, 36293808 - 36293639
Alignment:
Q  221 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 320  Q
    |||||||||||  |||||  |||||||||| ||||||| |||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||| |||    
T  36293808 catgggcggttctaccgtgtggcgaccccgagcggtcgtccggactcgatcgataatttttgtacattagactcaacccaaaagcccattaacacattta 36293709  T
Q  321 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacac 390  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||||||||    
T  36293708 caaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacac 36293639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 241 - 405
Target Start/End: Complemental strand, 39657673 - 39657509
Alignment:
Q  241 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 340  Q
    ||||||||| | ||||||  |||||||||| ||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  39657673 ggcgaccccagacggtcgttcgggctcgattgataatttttgcacattagactcaacccaaaagctcattaacacatttacaaaaagaaaaatttgggca 39657574  T
Q  341 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcat 405  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||| ||||||||    
T  39657573 atctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat 39657509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 221 - 396
Target Start/End: Original strand, 39434676 - 39434851
Alignment:
Q  221 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 320  Q
    |||||||||||  |||||  |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||    
T  39434676 catgggcggttctaccgtgtggcgaccctgggcggtcgcccgggctcgatcgataattttttcacattagactcaacccaaaagcccattaacacattta 39434775  T
Q  321 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 396  Q
    ||||| ||||||||||||||||||||||||| ||||| | ||||||||||  |||||||||||||||||| |||||    
T  39434776 caaaatgaaaaatttgggcaatctgaaaattgtcacatgtaaataggtctttgaattttatttagcacactattga 39434851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 219 - 396
Target Start/End: Complemental strand, 26283507 - 26283330
Alignment:
Q  219 aacatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacact 318  Q
    ||||||||||||| ||||||   |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||   ||||||||| |    
T  26283507 aacatgggcggttccaccgtgtagcgacctcgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagttcattaacacatt 26283408  T
Q  319 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 396  Q
    || |||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||| |||||| |||||    
T  26283407 tataaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattga 26283330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 259 - 396
Target Start/End: Original strand, 16155015 - 16155152
Alignment:
Q  259 cccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacac 358  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||| ||||||||||||||| ||||||    
T  16155015 cccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttataaaaagaaaaatttaggcaatctgaaaattgtcacac 16155114  T
Q  359 gcaaataggtctcggaattttatttagcacacaattga 396  Q
    |||||||||||| ||||||||||||||||||| |||||    
T  16155115 gcaaataggtcttggaattttatttagcacactattga 16155152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 243 - 407
Target Start/End: Complemental strand, 1776541 - 1776377
Alignment:
Q  243 cgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaat 342  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| | |||||| ||||| | ||||||||| |||||||||||||||||||||||||    
T  1776541 cgaccccgggcggtcgcccgggctcgatcgataatttttgtacattaaagtcaaccaaaaagtccattaacacatttacaaaaagaaaaatttgggcaat 1776442  T
Q  343 ctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatct 407  Q
     |||||||| |||||||||||||||||| ||||||||||||||||||| || ||  |||||||||    
T  1776441 ttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactatcgacaggttcatct 1776377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 271 - 405
Target Start/End: Complemental strand, 16334013 - 16333879
Alignment:
Q  271 cgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtct 370  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  16334013 cgataatttttgcacattagattcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtct 16333914  T
Q  371 cggaattttatttagcacacaattgatgggttcat 405  Q
     ||||||||||||||||||| ||||| || |||||    
T  16333913 tggaattttatttagcacactattgacggattcat 16333879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 220 - 390
Target Start/End: Complemental strand, 3155819 - 3155649
Alignment:
Q  220 acatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactt 319  Q
    ||||||||||||  | |||  ||||| ||||||||||||| ||||||||||| |||||||||||||||| ||||||||| ||||| | ||||||||| ||    
T  3155819 acatgggcggttctatcgtatggcgatcccgggcggtcgctcgggctcgatcaataatttttgcacattcgactcaacctaaaagtccattaacacattt 3155720  T
Q  320 acaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacac 390  Q
    | |||||||||||||||| ||||||||||||| |||||||||||||| ||| |||||||||||||||||||    
T  3155719 ataaaaagaaaaatttggacaatctgaaaattgtcacacgcaaatagatcttggaattttatttagcacac 3155649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 243 - 408
Target Start/End: Original strand, 19985941 - 19986106
Alignment:
Q  243 cgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaat 342  Q
    ||||| |||||||||| ||| |||||||||||||||||||||||||||| |||||||||||| | |||| |||| ||||||||||||||||||||| |||    
T  19985941 cgacctcgggcggtcgtccgagctcgatcgataatttttgcacattagattcaacccaaaagtccattagcacatttacaaaaagaaaaatttgggtaat 19986040  T
Q  343 ctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    || |||||| |||||||||||||||||| | ||||||||||| ||||| |||||  ||||||||||    
T  19986041 ctaaaaattatcacacgcaaataggtcttgaaattttatttaacacactattgacaggttcatctc 19986106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 224 - 408
Target Start/End: Original strand, 36291354 - 36291538
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    |||||||||||||| ||| |||| ||||||||||| ||||| |||||| |||||||||||||||||||   |||| |||||   ||||||||| ||||||    
T  36291354 gggcggtttcaccgcccgccgactccgggcggtcgtccgggttcgatcaataatttttgcacattagatctaacctaaaagttcattaacacatttacaa 36291453  T
Q  324 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    ||||||||||||||||||||| |||||| | |||| |||||||||||| |||||||||||| ||||| ||||| |||||||||||    
T  36291454 aaagaaaaatttgggcaatctcaaaattattacacacaaataggtctcagaattttatttaacacactattgacgggttcatctc 36291538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 260 - 408
Target Start/End: Original strand, 43068896 - 43069044
Alignment:
Q  260 ccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacg 359  Q
    |||||||||||| ||||||||| |||||||||| ||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||||| ||| |    
T  43068896 ccgggctcgatcaataattttttcacattagacccaacccaaaagtccattaacacatttacaaaaagaaaaatttgggcaatctgaaaattcttacatg 43068995  T
Q  360 caaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
     ||||| |||||||||||||||||||||||| ||||  || ||||||||    
T  43068996 taaataagtctcggaattttatttagcacactattgccggattcatctc 43069044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 254 - 367
Target Start/End: Original strand, 28801300 - 28801415
Alignment:
Q  254 ggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttggg--caatctgaaaatt 351  Q
    |||||||| |||||||||||||||||||||||||||||  ||| ||||||||| |||||||||||||||||||||||||||||||   ||| ||||||||    
T  28801300 ggtcgccctggctcgatcgataatttttgcacattagatccaaaccaaaagcccattaacacacttacaaaaagaaaaatttgggaaaaatatgaaaatt 28801399  T
Q  352 ctcacacgcaaatagg 367  Q
    ||||||||||||||||    
T  28801400 ctcacacgcaaatagg 28801415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 224 - 326
Target Start/End: Original strand, 202622 - 202724
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    |||||||||||||| ||| ||||||  || |||||||||||||||||||||||||| || |||||||    |||||||||||| ||||| ||||| ||||    
T  202622 gggcggtttcaccgcccgacgaccctaggtggtcgcccgggctcgatcgataatttgtgtacattaggtcgaacccaaaagcccattaagacactaacaa 202721  T
Q  324 aaa 326  Q
    |||    
T  202722 aaa 202724  T

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Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 41324400 - 41324312
Alignment:
Q  3 tgaagtttttccattttggtctttgccctactcaccctttgaactattttaatagaaggatacaaatcagcaatgcaaaatcctcccaa 91  Q
    ||||||||||||||||||| ||| ||||||||||| | |||||  | |||||||||||||||||||||| |||| ||||  ||||||||    
T  41324400 tgaagtttttccattttggccttcgccctactcacgcattgaagcaatttaatagaaggatacaaatcaacaatacaaatgcctcccaa 41324312  T

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Target: chr5; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 31225253 - 31225166
Alignment:
Q  3 tgaagtttttccattttggtctttgccctactcaccctttgaactattttaatagaaggatacaaatcagcaatgcaaaatcctccca 90  Q
    ||||| ||||| | ||||||||| ||||||||||||| |||||  ||||| ||||||||||||| |||| |||| |||||||||||||    
T  31225253 tgaagcttttcaactttggtcttcgccctactcacccattgaagcatttttatagaaggatacacatcaacaatacaaaatcctccca 31225166  T

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Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 31178529 - 31178602
Alignment:
Q  17 tttggtctttgccctactcaccctttgaactattttaatagaaggatacaaatcagcaatgcaaaatcctccca 90  Q
    |||||||||  ||| |||||||| |||||  ||||||||||||||||||| ||||||||| |||||||||||||    
T  31178529 tttggtcttcaccccactcacccgttgaagcattttaatagaaggatacacatcagcaatacaaaatcctccca 31178602  T

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Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 224 - 271
Target Start/End: Complemental strand, 26543949 - 26543902
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatc 271  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||    
T  26543949 gggcggttttaccgcccggcgaccccgggcggtcgcccgggctcgatc 26543902  T

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Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 90
Target Start/End: Original strand, 31188560 - 31188647
Alignment:
Q  3 tgaagtttttccattttggtctttgccctactcaccctttgaactattttaatagaaggatacaaatcagcaatgcaaaatcctccca 90  Q
    ||||| ||||| | ||| ||||| ||||||||||||| |||||  ||||||| ||||||||||| ||||||||| |||||| ||||||    
T  31188560 tgaagcttttcaactttcgtcttcgccctactcacccattgaaacattttaacagaaggatacacatcagcaatacaaaattctccca 31188647  T

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Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 41337213 - 41337150
Alignment:
Q  30 ctactcaccctttgaactattttaatagaaggatacaaatcagcaatgcaaaatcctcccaata 93  Q
    ||||| ||| |||||| ||||||||||||||||||||| |||||||| |||||| |||||||||    
T  41337213 ctacttaccttttgaagtattttaatagaaggatacaagtcagcaatacaaaattctcccaata 41337150  T

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Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 41332311 - 41332221
Alignment:
Q  3 tgaagtttttccattttggtctttgccctactcaccctttgaactattttaatagaaggatacaaatcagcaatgcaaaatcctcccaata 93  Q
    |||| ||||||||||||||||||  |||||||||  | |||||  ||||||||||||||||||||||| |||||   ||||||||| ||||    
T  41332311 tgaattttttccattttggtcttctccctactcatgcattgaagcattttaatagaaggatacaaatctgcaatttcaaatcctcctaata 41332221  T

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Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 41328298 - 41328225
Alignment:
Q  3 tgaagtttttccattttggtctttgccctactcaccctttgaactattttaatagaaggatacaaatcagcaat 76  Q
    |||||||||||||||||||||||  ||||| ||| || |||||  | ||||||||||||||||||||| |||||    
T  41328298 tgaagtttttccattttggtcttctccctagtcatccattgaagcaatttaatagaaggatacaaatctgcaat 41328225  T

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Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 90
Target Start/End: Complemental strand, 41286320 - 41286280
Alignment:
Q  50 tttaatagaaggatacaaatcagcaatgcaaaatcctccca 90  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  41286320 tttaatagaaggatacaaatcaacaatgcaaaatcctccca 41286280  T

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Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 48 - 160
Target Start/End: Complemental strand, 41366446 - 41366334
Alignment:
Q  48 attttaatagaaggatacaaatcagcaatgcaaaatcctcccaataactttattgattcctccattgctgatttgaactctaatatgtgtctactctttt 147  Q
    ||||||||||||||||||||||| ||||   ||||||||||||||| ||| | |  ||||| |||||||||||| ||| ||  |  |||| || ||||||    
T  41366446 attttaatagaaggatacaaatctgcaaaagaaaatcctcccaatagcttaaatatttccttcattgctgatttaaacacttcttggtgtttattctttt 41366347  T
Q  148 ttccaaaagctgc 160  Q
    ||||||| |||||    
T  41366346 ttccaaatgctgc 41366334  T

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Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 91
Target Start/End: Complemental strand, 41316331 - 41316243
Alignment:
Q  3 tgaagtttttccattttggtctttgccctactcaccctttgaactattttaatagaaggatacaaatcagcaatgcaaaatcctcccaa 91  Q
    ||||||||||||||||||||||| || |||||||  | |||||  | ||||||||||||| |||||||  |||| ||||  ||||||||    
T  41316331 tgaagtttttccattttggtcttcgctctactcaagcattgaagcaatttaatagaaggaaacaaatccacaatacaaacgcctcccaa 41316243  T

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Target: chr2 (Bit Score: 157; Significance: 2e-83; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 224 - 408
Target Start/End: Original strand, 45418566 - 45418750
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||    
T  45418566 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagatccaacccaaaagccaattaacacacttacaa 45418665  T
Q  324 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||    
T  45418666 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctctgaattttatttagcacactattgacgggttcatctc 45418750  T

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Target: chr2; HSP #2
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 224 - 407
Target Start/End: Original strand, 8147334 - 8147518
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||| ||||||||||||||||||    
T  8147334 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatctttgcacattagacccaactcaaaagtcaattaacacacttacaa 8147433  T
Q  324 aaagaaaaatttgggcaatctg-aaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatct 407  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||| ||||| ||||||||||    
T  8147434 aaagaaaaatttgggcaatctgaaaaattctcacacgcaaatagatctcggaattttatttaacacactattgacgggttcatct 8147518  T

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Target: chr2; HSP #3
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 224 - 408
Target Start/End: Complemental strand, 44084787 - 44084603
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||| |||||||   ||||||||||||||||    
T  44084787 gggcggtttcaccgcccggcgaccccgggcagtcgcccgggctcgatcgataatttttgcacattaaacccaatccaaaagttcattaacacacttacaa 44084688  T
Q  324 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||| |||||||||||    
T  44084687 aaagaaaaatttgggcaatctgaaaattctcatacgcaaataggtctcagaattttatttagcacactattgacgggttcatctc 44084603  T

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Target: chr2; HSP #4
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 224 - 405
Target Start/End: Complemental strand, 8059517 - 8059336
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    |||||||||||||| ||| ||||||||| || |||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8059517 gggcggtttcaccgcccgacgaccccggccgatcgcccaggctcaatcgataatttttgcacattagagtcaacccaaaagccaattaacacacttacaa 8059418  T
Q  324 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcat 405  Q
    |||||||||||||| |||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||    
T  8059417 aaagaaaaatttggccaatttgaaaattctcacacacaaatcggtctcggaattttatttagcacacaattgacgggttcat 8059336  T

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Target: chr2; HSP #5
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 220 - 405
Target Start/End: Original strand, 42439965 - 42440150
Alignment:
Q  220 acatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactt 319  Q
    ||||||||||||  |||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| ||    
T  42439965 acatgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactaaacccaaaagcccattaacacattt 42440064  T
Q  320 acaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcat 405  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||| ||||| || |||||    
T  42440065 acaaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttgcaattttatttagcacactattgacggattcat 42440150  T

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Target: chr2; HSP #6
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 224 - 407
Target Start/End: Original strand, 770977 - 771165
Alignment:
Q  224 gggcggtttcaccgtccggcgacc-----ccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacact 318  Q
    |||||||||||||| |||||||||     ||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||| |||||||||||    
T  770977 gggcggtttcaccgcccggcgaccggatcccgggcggtcgcccgggctcgatcgataacttttgcacattagacccaaccaaaaagcccattaacacact 771076  T
Q  319 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatct 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||||| ||||||||||    
T  771077 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaactttatttagcacattattgacgggttcatct 771165  T

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Target: chr2; HSP #7
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 244 - 396
Target Start/End: Complemental strand, 41251798 - 41251646
Alignment:
Q  244 gaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatc 343  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  41251798 gaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaatttgggcaatc 41251699  T
Q  344 tgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 396  Q
    |||||||| ||||||| |||||||||| ||||||||||||||||||| |||||    
T  41251698 tgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattga 41251646  T

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Target: chr2; HSP #8
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 221 - 405
Target Start/End: Original strand, 35962695 - 35962879
Alignment:
Q  221 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 320  Q
    |||||||||||  |||||  ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||    
T  35962695 catgggcggttctaccgtatggcgaccccaggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcttattaacacattta 35962794  T
Q  321 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcat 405  Q
    ||||||||||| ||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||| ||||| ||||||||    
T  35962795 caaaaagaaaattttgggcaatctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgggttcat 35962879  T

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Target: chr2; HSP #9
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 259 - 408
Target Start/End: Complemental strand, 12756986 - 12756837
Alignment:
Q  259 cccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacac 358  Q
    |||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  12756986 cccgggttcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgagcaatctgaaaattctcacac 12756887  T
Q  359 gcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    ||||||| |||||||||||||||||||||||| ||||| |||||||||||    
T  12756886 gcaaataagtctcggaattttatttagcacactattgacgggttcatctc 12756837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 241 - 408
Target Start/End: Complemental strand, 31581789 - 31581622
Alignment:
Q  241 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 340  Q
    ||||||| ||||||||||||| ||||||| ||||| |||||||| |||||||||| |||||||||| ||||||||| |||||||||||||||||||||||    
T  31581789 ggcgaccacgggcggtcgcccaggctcgagcgatactttttgcatattagactcatcccaaaagcccattaacacatttacaaaaagaaaaatttgggca 31581690  T
Q  341 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||    
T  31581689 atctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 31581622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 219 - 396
Target Start/End: Complemental strand, 17445228 - 17445053
Alignment:
Q  219 aacatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacact 318  Q
    |||||||||||||  |||||  ||||||| |||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||| ||||||||| |    
T  17445228 aacatgggcggttctaccgtgtggcgacctcgggcggtcgcccgagctcgatcgataatttttgcac--tagactcaacccaaaagcccattaacacatt 17445131  T
Q  319 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 396  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||| |||||    
T  17445130 tacaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattga 17445053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 221 - 405
Target Start/End: Complemental strand, 32127328 - 32127144
Alignment:
Q  221 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 320  Q
    |||||||||||  | |||  ||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||  ||||||||| |||    
T  32127328 catgggcggttctagcgtatggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattaaactcgacccaaaagctcattaacacattta 32127229  T
Q  321 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcat 405  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||| ||| ||||||||||||||||||| ||||| ||||||||    
T  32127228 caaaaagaaaaatttaggcaatctgaaaattgtcacacgcaaatagatcttggaattttatttagcacactattgacgggttcat 32127144  T

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Target: chr2; HSP #13
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 221 - 396
Target Start/End: Complemental strand, 6403991 - 6403816
Alignment:
Q  221 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 320  Q
    ||||||||||| ||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||   ||||||||| |||    
T  6403991 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagttcattaacacattta 6403892  T
Q  321 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 396  Q
     |||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||| |||||| |||||    
T  6403891 taaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattga 6403816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 244 - 405
Target Start/End: Original strand, 16405603 - 16405764
Alignment:
Q  244 gaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatc 343  Q
    ||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||  ||||||||| ||| |||||||||||||||| |||||    
T  16405603 gaccctgggcggtcgcccgggctcaatcgataatttttgcacgttagactcaacccaaaagctcattaacacatttataaaaagaaaaatttggacaatc 16405702  T
Q  344 tgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcat 405  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||||| ||||| ||||||||    
T  16405703 tgaaaattgtcacacgcaaataagtcttggaattttatttagcacactattgacgggttcat 16405764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 221 - 405
Target Start/End: Original strand, 18981597 - 18981780
Alignment:
Q  221 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 320  Q
    |||||||||||  |||||  |||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| | ||||| ||| |||    
T  18981597 catgggcggttctaccgtatggcgaccc-gggcggtcgtccgggctcgattgataatttttgcacattagactcaacccaaaagtccattaaaacattta 18981695  T
Q  321 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcat 405  Q
    |||||||||||||||||||||| | |||||| |||||||||||||||||| |||||||||||||||||||  |||| ||||||||    
T  18981696 caaaaagaaaaatttgggcaatttaaaaattgtcacacgcaaataggtcttggaattttatttagcacactgttgacgggttcat 18981780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 219 - 378
Target Start/End: Complemental strand, 2958289 - 2958131
Alignment:
Q  219 aacatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacact 318  Q
    |||||||||||||  |||||  |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |    
T  2958289 aacatgggcggttctaccgtatggcgaccccgggcggtcgtccgggctcgatcgataatttt-gcacattagactcaacccaaaagcccattaacacatt 2958191  T
Q  319 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattt 378  Q
    |||||| ||||||||||||| |||||||||||| |||||||||||||||||| |||||||    
T  2958190 tacaaagagaaaaatttgggtaatctgaaaattgtcacacgcaaataggtcttggaattt 2958131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 260 - 408
Target Start/End: Complemental strand, 26162847 - 26162702
Alignment:
Q  260 ccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacg 359  Q
    ||||||||  |||||||||||| ||||||| | ||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||||| ||     
T  26162847 ccgggctccttcgataatttttacacattaaattcaacccaaaaacccattaacacacttacaaaaagaaaaatttgggcaatctaaaaattctcaaaca 26162748  T
Q  360 caaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    |||||||||||||||   ||||||||||||  ||||| |||||||||||    
T  26162747 caaataggtctcgga---ttatttagcacattattgacgggttcatctc 26162702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 266 - 405
Target Start/End: Original strand, 2285887 - 2286026
Alignment:
Q  266 tcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaata 365  Q
    |||||||||||||||||||||||| |  ||||| ||||| | ||||||||| |||| ||| |||||||||| |||||||||||||| |||||||||||||    
T  2285887 tcgatcgataatttttgcacattaaatccaaccaaaaagtctattaacacatttacgaaaggaaaaatttgagcaatctgaaaattgtcacacgcaaata 2285986  T
Q  366 ggtctcggaattttatttagcacacaattgatgggttcat 405  Q
    ||| | ||||||||||||||||||| ||||| | ||||||    
T  2285987 ggttttggaattttatttagcacactattgacgtgttcat 2286026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 239 - 355
Target Start/End: Original strand, 26237955 - 26238071
Alignment:
Q  239 ccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttggg 338  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| ||||||  ||| ||||||| | |||||||||||||||||||||||||||||||    
T  26237955 ccggcgaccccgggcggtcgcccgggctcgatcgata-tttttgcaaattagatgcaaaccaaaagtccattaacacacttacaaaaagaaaaatttggg 26238053  T
Q  339 c-aatctgaaaattctca 355  Q
    | |||||||||| |||||    
T  26238054 caaatctgaaaactctca 26238071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 228 - 367
Target Start/End: Complemental strand, 4555390 - 4555250
Alignment:
Q  228 ggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaag 327  Q
    |||| ||||| ||||||| | |||||||||||  || ||||||||||||||||||||||| | || ||||||||||||   |||||||||||||||||||    
T  4555390 ggttccaccgcccggcgatctcgggcggtcgct-ggactcgatcgataatttttgcacatcaaacccaacccaaaagctcgttaacacacttacaaaaag 4555292  T
Q  328 aaaaatttgggc--aatctgaaaattctcacacgcaaatagg 367  Q
    |||| |||||||  |||||||||||||||||||| |||||||    
T  4555291 aaaattttgggcaaaatctgaaaattctcacacgtaaatagg 4555250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 250 - 367
Target Start/End: Complemental strand, 7072710 - 7072589
Alignment:
Q  250 gggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaatta--acacacttacaaaaagaaaaatttgggcaa--tctg 345  Q
    ||||||||||||||||||||||||||||||||  |||||| |||||||||||||||| ||||  ||||||||| ||||||||||  |||| |||  ||||    
T  7072710 gggcggtcgcccgggctcgatcgataatttttttacattaaactcaacccaaaagcccattaacacacacttataaaaagaaaatattggacaaattctg 7072611  T
Q  346 aaaattctcacacgcaaatagg 367  Q
    ||||||||| |||| |||||||    
T  7072610 aaaattctcgcacgtaaatagg 7072589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 224 - 271
Target Start/End: Original strand, 34523223 - 34523270
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatc 271  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||    
T  34523223 gggcggttttaccgcccggcgaccccgggcggtcgcccgggctcgatc 34523270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 320
Target Start/End: Original strand, 34905969 - 34906028
Alignment:
Q  261 cgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 320  Q
    |||||||||||||||||||||||||||||  |  |||||||||||| |||||||||||||    
T  34905969 cgggctcgatcgataatttttgcacattaagcctaacccaaaagcccattaacacactta 34906028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 156; Significance: 9e-83; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 221 - 408
Target Start/End: Complemental strand, 34389243 - 34389056
Alignment:
Q  221 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 320  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  34389243 catgggcgatttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacccaaaagctaattaacacactta 34389144  T
Q  321 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || || |||||||||||    
T  34389143 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattatcgacgggttcatctc 34389056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 224 - 408
Target Start/End: Complemental strand, 37002328 - 37002144
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    |||||||||||||| ||||||||||||||||||||  ||| |||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||    
T  37002328 gggcggtttcaccgcccggcgaccccgggcggtcgttcggtctcgatcgataatttttgcacattagacccaatccaaaagtcaattaacacacttacaa 37002229  T
Q  324 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||    
T  37002228 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 37002144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 218 - 408
Target Start/End: Complemental strand, 43184658 - 43184468
Alignment:
Q  218 gaacatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacac 317  Q
    ||||| |||||||||||||| |||||||  |||||||||||| ||||||||||||||||||||| | ||| ||||| |||||||||||||||||||| ||    
T  43184658 gaacaggggcggtttcaccgcccggcgattccgggcggtcgctcgggctcgatcgataatttttacgcatcagacttaacccaaaagccaattaacatac 43184559  T
Q  318 ttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||    
T  43184558 ttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctctgaattttatttagcacactattgacgggttcatctc 43184468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 224 - 408
Target Start/End: Original strand, 26624728 - 26624913
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgat-cgataatttttgcacattagactcaacccaaaagccaattaacacacttaca 322  Q
    |||||||||||||| ||||| |||||||||||||||| ||||||||| |||||||||||||| ||||||| ||| |||||||  ||||||||||||||||    
T  26624728 gggcggtttcaccgcccggcaaccccgggcggtcgcctgggctcgattcgataatttttgcatattagacccaatccaaaagttaattaacacacttaca 26624827  T
Q  323 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  26624828 aaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 26624913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 221 - 405
Target Start/End: Original strand, 5555467 - 5555651
Alignment:
Q  221 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 320  Q
    |||||||||||  |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||    
T  5555467 catgggcggttctaccgtatggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacgcattta 5555566  T
Q  321 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcat 405  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||| ||||| ||||||||    
T  5555567 caaaaagaaaaatttgggcaatctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgggttcat 5555651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 224 - 406
Target Start/End: Complemental strand, 8867915 - 8867733
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||| ||| ||||||    
T  8867915 gggcagtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcatattagacccaatccaaaagccaattaatacatttacaa 8867816  T
Q  324 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatc 406  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||| || ||||||    
T  8867815 aaagaaaaatttgggcaatcggaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacggattcatc 8867733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 250 - 408
Target Start/End: Original strand, 35090177 - 35090335
Alignment:
Q  250 gggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaa 349  Q
    |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  35090177 gggcggtcgcccgggctcgatcaataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaaatttgggtaatctgaaaa 35090276  T
Q  350 ttctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||    
T  35090277 ttctcacacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 35090335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 221 - 405
Target Start/End: Complemental strand, 3114283 - 3114099
Alignment:
Q  221 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 320  Q
    |||||||||||  |||||  || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||    
T  3114283 catgggcggttctaccgtatggtgaccccggacggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 3114184  T
Q  321 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcat 405  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||| ||||| ||||||||    
T  3114183 caaaaagaaaaatttgggcaatctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgggttcat 3114099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 224 - 408
Target Start/End: Original strand, 33685547 - 33685731
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    |||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||    
T  33685547 gggcggtttcaccgcccggcgaccccaggcagtcgctcgggctcgatcgataatttttgcacattaaacccaacccaaaagcccattaacacacttacaa 33685646  T
Q  324 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||||  ||||||||||||||||| ||||| ||||| |||||    
T  33685647 aaagaaaaatttgggcaatctgaaaattctcatacgcaaatatgtctcataattttatttagcacactattgacgggtttatctc 33685731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 224 - 408
Target Start/End: Original strand, 7002708 - 7002892
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||  ||||||  |||||| || |||||||||||||||||||||||| |||||    
T  7002708 gggcggtttcaccgcccggcgaccccgagcggtcgcccgggctcgatcgacgatttttctacattacacccaacccaaaagccaattaacacacatacaa 7002807  T
Q  324 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    ||| |||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||    
T  7002808 aaataaaaatttggacaatctaaaaattctcacacgcaaataggtcacggaattttatttagcacactattgacgggttcatctc 7002892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 224 - 408
Target Start/End: Original strand, 7048579 - 7048763
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||  ||||||  |||||| || |||||||||||||||||||||||| |||||    
T  7048579 gggcggtttcaccgcccggcgaccccgagcggtcgcccgggctcgatcgacgatttttctacattacacccaacccaaaagccaattaacacacatacaa 7048678  T
Q  324 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    ||| |||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||    
T  7048679 aaataaaaatttggacaatctaaaaattctcacacgcaaataggtcacggaattttatttagcacactattgacgggttcatctc 7048763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 220 - 396
Target Start/End: Complemental strand, 14777295 - 14777119
Alignment:
Q  220 acatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactt 319  Q
    ||||||||||||  |||||   |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||    
T  14777295 acatgggcggttctaccgtgtagcgatcccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagctcattaacacattt 14777196  T
Q  320 acaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 396  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||| |||||    
T  14777195 acaaaaagaaaaatttgggcaatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattga 14777119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 241 - 408
Target Start/End: Original strand, 36630816 - 36630983
Alignment:
Q  241 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 340  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||| | ||||||||| |||||||||||||||||||||||    
T  36630816 ggcgaccccggacggtcgcccgggctcgatcgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaaagaaaaatttgggca 36630915  T
Q  341 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    ||||||||||| |||||||||||||||||| ||||||||| ||||||||| ||||| |||||||||||    
T  36630916 atctgaaaattgtcacacgcaaataggtcttggaattttagttagcacactattgacgggttcatctc 36630983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 260 - 408
Target Start/End: Complemental strand, 40920151 - 40920003
Alignment:
Q  260 ccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacg 359  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |    
T  40920151 ccgggctcgatcgataatttttgcacattagatttaacccaaaagccaattaacacatttacaaaaagaaaaatttggacaatctgaaaattctcacatg 40920052  T
Q  360 caaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  40920051 caaataggtctcggaattttatttagcacactattgacgggttcatctc 40920003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 241 - 408
Target Start/End: Original strand, 8394125 - 8394292
Alignment:
Q  241 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 340  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| | ||||||||| |||||||| ||||||||||||||    
T  8394125 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaaggaaaaatttgggca 8394224  T
Q  341 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    ||||||||||| ||||||| |||||||||| ||||||||||||||||||| ||||| ||||| |||||    
T  8394225 atctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacgggtttatctc 8394292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 264 - 407
Target Start/End: Complemental strand, 38638380 - 38638237
Alignment:
Q  264 gctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaa 363  Q
    ||||||| ||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38638380 gctcgattgataatttttgcacattagatccaacccaaaagtcaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaa 38638281  T
Q  364 taggtctcggaattttatttagcacacaattgatgggttcatct 407  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||    
T  38638280 taggtctcggaattttatttagcacactattgacgggttcatct 38638237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 259 - 408
Target Start/End: Original strand, 36658199 - 36658348
Alignment:
Q  259 cccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacac 358  Q
    ||||| |||||||||||||||||||||||| ||| ||||| ||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||    
T  36658199 cccggactcgatcgataatttttgcacattggacccaaccgaaaagccaattaacatactaacaaaaataaaaatttgggcaatctgaaaattctcacac 36658298  T
Q  359 gcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  36658299 gcaaataggtctcggaattttatttagcacactattgacgggttcatctc 36658348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 300 - 367
Target Start/End: Complemental strand, 10868583 - 10868514
Alignment:
Q  300 aaaagccaattaacacacttacaaaaagaaaaatttgggc--aatctgaaaattctcacacgcaaatagg 367  Q
    ||||||| ||||||||| ||||||||||||||||||||||  ||||||||||||||||| ||||||||||    
T  10868583 aaaagcccattaacacatttacaaaaagaaaaatttgggcaaaatctgaaaattctcacgcgcaaatagg 10868514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 331
Target Start/End: Original strand, 26502797 - 26502899
Alignment:
Q  228 ggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaag 327  Q
    |||| ||||||  ||||||||| ||| |||||||||||||||||||   |||||||| ||||  | ||||||||||||| |||||||||| ||||||||     
T  26502797 ggttccaccgtgtggcgaccccaggcagtcgcccgggctcgatcgaatttttttgcatattaagcccaacccaaaagcccattaacacac-tacaaaaaa 26502895  T
Q  328 aaaa 331  Q
    ||||    
T  26502896 aaaa 26502899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 331
Target Start/End: Complemental strand, 26589917 - 26589815
Alignment:
Q  228 ggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaag 327  Q
    |||| ||||||  ||||||||| ||| |||||||||||||||||||   |||||||| ||||  | ||||||||||||| |||||||||| ||||||||     
T  26589917 ggttccaccgtgtggcgaccccaggcagtcgcccgggctcgatcgaatttttttgcatattaagcccaacccaaaagcccattaacacac-tacaaaaaa 26589819  T
Q  328 aaaa 331  Q
    ||||    
T  26589818 aaaa 26589815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 239 - 286
Target Start/End: Complemental strand, 10876876 - 10876829
Alignment:
Q  239 ccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcaca 286  Q
    ||||||| |||| | |||||||||||||||||||||||||||||||||    
T  10876876 ccggcgaacccgtgtggtcgcccgggctcgatcgataatttttgcaca 10876829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 37966666 - 37966614
Alignment:
Q  225 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataat 277  Q
    ||||||||||||| ||||||||| | |||||||| ||| ||||||||||||||    
T  37966666 ggcggtttcaccgcccggcgacctcaggcggtcgtccgagctcgatcgataat 37966614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 154; Significance: 1e-81; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 219 - 408
Target Start/End: Original strand, 28996708 - 28996897
Alignment:
Q  219 aacatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacact 318  Q
    |||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||| ||||| |||||||||||||    
T  28996708 aacaggggcggtttcaccgcccggcgaccccgggcggtcgcccgagctcgatcgataatttttgcgcattagacccaacctaaaagtcaattaacacact 28996807  T
Q  319 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  28996808 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 28996897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 241 - 408
Target Start/End: Original strand, 18339106 - 18339273
Alignment:
Q  241 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 340  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||| ||||||||    
T  18339106 ggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattagacccaatctaaaagccaattaacacacttacaaaaagaaaattttgggca 18339205  T
Q  341 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  18339206 atctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 18339273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 221 - 405
Target Start/End: Complemental strand, 34948945 - 34948761
Alignment:
Q  221 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 320  Q
    |||||||||||  |||||  ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||    
T  34948945 catgggcggttctaccgtatggcgaccccaggcggtcgcccaggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 34948846  T
Q  321 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcat 405  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||| ||| | ||||||||||||||||| ||||| ||||||||    
T  34948845 caaaaagaaaaatttgggcaatctgaaaattgtcacacacaaatagatcttgaaattttatttagcacactattgacgggttcat 34948761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 221 - 405
Target Start/End: Original strand, 13837801 - 13837985
Alignment:
Q  221 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 320  Q
    |||||||||||  |||||  |||||||||||||| |||| |||| ||||||||||||||||| ||||||||||||||||||||||  || |||||| |||    
T  13837801 catgggcggttctaccgtatggcgaccccgggcgatcgctcgggttcgatcgataatttttgtacattagactcaacccaaaagcacatcaacacattta 13837900  T
Q  321 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcat 405  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||| ||||||||    
T  13837901 caaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat 13837985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 224 - 390
Target Start/End: Original strand, 29743266 - 29743432
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    |||||||||||||||||| ||| |||||||||| |||||||||| |||||||||||||||||||||||| ||||| |||||   ||||||||| |||||     
T  29743266 gggcggtttcaccgtccgacgatcccgggcggttgcccgggctcaatcgataatttttgcacattagacccaaccaaaaagttcattaacacatttacag 29743365  T
Q  324 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacac 390  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  29743366 aaagaaaaatttgggcaatctgaaaattcttacacgcaaataggtctcggaattttatttagcacac 29743432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 219 - 396
Target Start/End: Original strand, 398595 - 398772
Alignment:
Q  219 aacatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacact 318  Q
    ||||||||||||| ||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||| |    
T  398595 aacatgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacatt 398694  T
Q  319 tacaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 396  Q
    || ||||||||||||||||||||| |||||||| ||||||| |||||||||| |||||||||||| |||||| |||||    
T  398695 tataaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattga 398772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 257 - 408
Target Start/End: Complemental strand, 33229487 - 33229336
Alignment:
Q  257 cgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcac 356  Q
    |||||||||||||||||| ||||||| ||||||||| ||||||||||| | ||||||||| || ||||||||||||||||||||||||||||||||| ||    
T  33229487 cgcccgggctcgatcgatcatttttgtacattagacccaacccaaaagtccattaacacatttccaaaaagaaaaatttgggcaatctgaaaattcttac 33229388  T
Q  357 acgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    ||| ||||| ||||||| |||||||||||||||| ||||  || ||||||||    
T  33229387 acgtaaataagtctcgggattttatttagcacactattgccggattcatctc 33229336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 225 - 326
Target Start/End: Complemental strand, 24698000 - 24697899
Alignment:
Q  225 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaa 324  Q
    ||||||||||||| ||||||||||||| |  |||||||||||| ||||||||||||| |||||||| | ||||||||||||| |||||||||||||||||    
T  24698000 ggcggtttcaccgcccggcgaccccggacactcgcccgggctcaatcgataattttttcacattaggcccaacccaaaagcccattaacacacttacaaa 24697901  T
Q  325 aa 326  Q
    ||    
T  24697900 aa 24697899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 227 - 337
Target Start/End: Complemental strand, 31028545 - 31028435
Alignment:
Q  227 cggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaa 326  Q
    ||||||||||| |||||||||||| ||||| |||||| |||||||||||||||||||||||||||  ||||| ||||||  ||||||||| |||||||||    
T  31028545 cggtttcaccgcccggcgaccccgagcggttgcccggactcgatcgataatttttgcacattagatccaacctaaaagctcattaacacatttacaaaaa 31028446  T
Q  327 gaaaaatttgg 337  Q
    | ||| |||||    
T  31028445 ggaaattttgg 31028435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 219 - 277
Target Start/End: Original strand, 13646995 - 13647053
Alignment:
Q  219 aacatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataat 277  Q
    |||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  13646995 aacaggggcggtttcaccacccggcgaccccgggcggtcgcccgggctcgatcgataat 13647053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 225 - 326
Target Start/End: Original strand, 24695472 - 24695572
Alignment:
Q  225 ggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaa 324  Q
    |||||||||||||||||  |||| ||| |  |||||| ||||  |||||| ||||||  ||||||| ||||||||||||||| |||||||||||||||||    
T  24695472 ggcggtttcaccgtccga-gacctcggacactcgcccaggctaaatcgatcattttttaacattaggctcaacccaaaagcccattaacacacttacaaa 24695570  T
Q  325 aa 326  Q
    ||    
T  24695571 aa 24695572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 224 - 277
Target Start/End: Complemental strand, 34385572 - 34385519
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataat 277  Q
    |||||||||||||| |||||||||||||||||| |||| |||||||||||||||    
T  34385572 gggcggtttcaccgcccggcgaccccgggcggttgccctggctcgatcgataat 34385519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 227 - 278
Target Start/End: Original strand, 2753336 - 2753387
Alignment:
Q  227 cggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatt 278  Q
    ||||||||||||||||||||||  |||||||||||| |||| ||||||||||    
T  2753336 cggtttcaccgtccggcgaccctaggcggtcgcccgagctcaatcgataatt 2753387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 256 - 319
Target Start/End: Original strand, 3050094 - 3050157
Alignment:
Q  256 tcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactt 319  Q
    |||||||||||| ||| ||||||||||||||||   | ||||| ||||||| ||||||||||||    
T  3050094 tcgcccgggctcaatcaataatttttgcacattgagcgcaaccgaaaagcccattaacacactt 3050157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 224 - 278
Target Start/End: Complemental strand, 21149385 - 21149331
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatt 278  Q
    |||| ||||||||| |||| |||| ||||||||||| |||||| |||||||||||    
T  21149385 gggcagtttcaccgcccggtgacctcgggcggtcgctcgggcttgatcgataatt 21149331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 318
Target Start/End: Original strand, 24072576 - 24072625
Alignment:
Q  269 atcgataatttttgcacattagactcaacccaaaagccaattaacacact 318  Q
    |||||||||||||||||||||||   ||||||||| || |||||||||||    
T  24072576 atcgataatttttgcacattagatcgaacccaaaaacccattaacacact 24072625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 140; Significance: 3e-73; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 221 - 408
Target Start/End: Original strand, 35907532 - 35907719
Alignment:
Q  221 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 320  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||  |||||||    
T  35907532 catgggcggtttcaccgcccggcgacctcgggcggtcgcccgggcttgatcgataatttttgcacattagacccaacccaaaagccaattagtacactta 35907631  T
Q  321 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| | |||||||||    
T  35907632 caaaaagaaaattttgggtaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgagttcatctc 35907719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 224 - 407
Target Start/End: Original strand, 17445296 - 17445479
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    |||||||||||  | |||||||||||  ||||||||||||||| |||| |||||||||| ||||||||  ||||||||||| ||||||||||||||||||    
T  17445296 gggcggtttcattgcccggcgaccccatgcggtcgcccgggctggatcaataatttttgtacattagatccaacccaaaagtcaattaacacacttacaa 17445395  T
Q  324 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatct 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||    
T  17445396 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgggttcatct 17445479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 220 - 405
Target Start/End: Original strand, 7433424 - 7433609
Alignment:
Q  220 acatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactt 319  Q
    ||||||||||||  |||||  ||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||    
T  7433424 acatgggcggttctaccgtatggcaaccccgggcggtcgcccgagctcgatctataatttttgcacattagactcaacccaaaagcccattaacacattt 7433523  T
Q  320 acaaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcat 405  Q
    |||||||||||| |||||||||||| |||||| |||||| ||||||||||| | ||||||||||||||||| ||||| ||||||||    
T  7433524 acaaaaagaaaattttgggcaatctaaaaattgtcacacacaaataggtcttgaaattttatttagcacactattgacgggttcat 7433609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 221 - 396
Target Start/End: Original strand, 26144235 - 26144410
Alignment:
Q  221 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 320  Q
    ||||||||||| ||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||| |||    
T  26144235 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta 26144334  T
Q  321 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 396  Q
     ||||||||||||||||||||| |||||||| ||||||| |||||||||| |||||||||||| |||||| |||||    
T  26144335 taaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattga 26144410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 224 - 408
Target Start/End: Original strand, 3828967 - 3829150
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    ||||||||||| |  ||||| ||||||| ||||||| |||| |||||||||||||||||||||||| || |||||||||||   ||||||||||||||||    
T  3828967 gggcggtttcatcacccggcaaccccggacggtcgctcgggttcgatcgataatttttgcacattaaacccaacccaaaagttcattaacacacttacaa 3829066  T
Q  324 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||| ||||| |||||||||||    
T  3829067 aaagaaaaatttgggcaatctgaaaattttcatacgcaaataggtct-ggaattttatttagcacactattgacgggttcatctc 3829150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 224 - 408
Target Start/End: Complemental strand, 42311125 - 42310941
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    ||||||||  |||||  ||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||    
T  42311125 gggcggttctaccgtatggcgaccccagacgatcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccgttaacacatttacaa 42311026  T
Q  324 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||| | |||||||||||| || | ||||| |||||||||||    
T  42311025 aaagaaaaatttgggcaatctgaaaattgtcacacgcaaataagtcttgaaattttatttagtacgctattgacgggttcatctc 42310941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 224 - 408
Target Start/End: Complemental strand, 321561 - 321377
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    |||||||||||||  |||||||   |||||||||| |||||||||||||||||||||||  |||||||  ||||||||||| | ||||||||| ||||||    
T  321561 gggcggtttcaccacccggcgatttcgggcggtcgtccgggctcgatcgataatttttgtgcattagatccaacccaaaagtccattaacacagttacaa 321462  T
Q  324 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||  ||||| |||||||||||    
T  321461 aaagaaaaatttgggcaatctgaaaattctcatatgcaaataggtctcggaattttatttaacacattattgacgggttcatctc 321377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 241 - 388
Target Start/End: Complemental strand, 32982223 - 32982076
Alignment:
Q  241 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 340  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||| ||||||| ||||||| | |||||||||||||||||||| ||    
T  32982223 ggcgaccccgggcggtcgcgcgggcccgatcgataatttttgcacattagacccaacctaaaagcccattaacatatttacaaaaagaaaaatttggaca 32982124  T
Q  341 atctgaaaattctcacacgcaaataggtctcggaattttatttagcac 388  Q
    ||||||||||| |||||| ||||||||||| |||||||||||||||||    
T  32982123 atctgaaaattgtcacacacaaataggtcttggaattttatttagcac 32982076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 224 - 367
Target Start/End: Complemental strand, 41972458 - 41972314
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    |||||||| |||||||| ||||||||||||||||||| || |||||||||||||||||||||||||||  ||||| ||||||| ||||||||||||||||    
T  41972458 gggcggttccaccgtccagcgaccccgggcggtcgcctgg-ctcgatcgataatttttgcacattagatccaacctaaaagcctattaacacacttacaa 41972360  T
Q  324 aaagaaaaatttgg--gcaatctgaaaattctcacacgcaaatagg 367  Q
    ||||||||||||||    ||||||||||||||||||||||||||||    
T  41972359 aaagaaaaatttggaaaaaatctgaaaattctcacacgcaaatagg 41972314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 224 - 367
Target Start/End: Original strand, 33489670 - 33489815
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    |||||||||||||  ||||||||||||| ||||||  |||| | | ||||||||||||| ||||||||||||| | ||||||| |||||||||||||| |    
T  33489670 gggcggtttcaccacccggcgaccccggacggtcgttcgggattgttcgataatttttgtacattagactcaaactaaaagcccattaacacacttacta 33489769  T
Q  324 aaagaaaaatttgggc--aatctgaaaattctcacacgcaaatagg 367  Q
    ||||||||||||| ||  ||||||||||||||||||||||||||||    
T  33489770 aaagaaaaatttgagcaaaatctgaaaattctcacacgcaaatagg 33489815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 220 - 347
Target Start/End: Original strand, 23313217 - 23313345
Alignment:
Q  220 acatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataattt-ttgcacattagactcaacccaaaagccaattaacacact 318  Q
    ||||||||||||  |||||  ||||| | |||||||| ||||||||||||| ||| |||| ||||||||||||||||||  |||||   ||||||||| |    
T  23313217 acatgggcggttctaccgtatggcgatctcgggcggttgcccgggctcgattgatgatttgttgcacattagactcaacataaaagttcattaacacatt 23313316  T
Q  319 tacaaaaagaaaaatttgggcaatctgaa 347  Q
    |||||||||||||||||||||||||||||    
T  23313317 tacaaaaagaaaaatttgggcaatctgaa 23313345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 219 - 277
Target Start/End: Complemental strand, 44352672 - 44352614
Alignment:
Q  219 aacatgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataat 277  Q
    |||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  44352672 aacaggggcggtttcaccatccggcgaccccgggaggtcgcccgggctcgatcgataat 44352614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 224 - 278
Target Start/End: Original strand, 31866960 - 31867014
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatt 278  Q
    |||||||||||||| |||||||||||||||||||||||||| |||| ||||||||    
T  31866960 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggttcgaccgataatt 31867014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 224 - 306
Target Start/End: Complemental strand, 48901288 - 48901207
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcc 306  Q
    |||||||| ||||| ||||| || ||||||||| ||| ||| |||||||||||||| |||||||||| | |||||||||||||    
T  48901288 gggcggttccaccgcccggcaactccgggcggtggccgggg-tcgatcgataatttatgcacattaggcccaacccaaaagcc 48901207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 260 - 326
Target Start/End: Complemental strand, 35951493 - 35951427
Alignment:
Q  260 ccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaa 326  Q
    ||||||||||||||||||||||| |||||||    ||||||| |||| ||||||||||| |||||||    
T  35951493 ccgggctcgatcgataatttttgtacattaggtcgaacccaatagcccattaacacactaacaaaaa 35951427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 136; Significance: 8e-71; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 241 - 408
Target Start/End: Original strand, 5230 - 5397
Alignment:
Q  241 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggca 340  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||| ||||||||    
T  5230 ggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattagacccaatctaaaagccaattaacacacttacaaaaagaaaattttgggca 5329  T
Q  341 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  5330 atctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 5397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 125; Significance: 3e-64; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 224 - 408
Target Start/End: Original strand, 31463 - 31647
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaa 323  Q
    ||||||||||| || ||||||||||| | |||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||    
T  31463 gggcggtttcatcgcccggcgaccccagacggtcgcccgggctcgatcgataatttttgcacactagacccaacccaaaagcccattaacacacttacaa 31562  T
Q  324 aaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||| | |||||||||| |||||| |||||  ||||||||||    
T  31563 aaagaaaaatttggacaatctgaaaattctcactcgcaaataggtctagtaattttattttgcacactattgacaggttcatctc 31647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 121; Significance: 7e-62; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 260 - 408
Target Start/End: Original strand, 52944 - 53092
Alignment:
Q  260 ccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaatttgggcaatctgaaaattctcacacg 359  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |    
T  52944 ccgggctcgatcgataatttttgcacattagatttaacccaaaagccaattaacacatttacaaaaagaaaaatttggacaatctgaaaattctcacatg 53043  T
Q  360 caaataggtctcggaattttatttagcacacaattgatgggttcatctc 408  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  53044 caaataggtctcggaattttatttagcacactattgacgggttcatctc 53092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 116; Significance: 7e-59; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 221 - 396
Target Start/End: Original strand, 17822 - 17997
Alignment:
Q  221 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 320  Q
    |||||||||||  |||||  |||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||    
T  17822 catgggcggttctaccgtgtggcgaccccgagcgatcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta 17921  T
Q  321 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 396  Q
    ||||||||||||||||||||||||||||||| ||||| | |||||||||| | ||||||||||||||||| |||||    
T  17922 caaaaagaaaaatttgggcaatctgaaaattgtcacatgtaaataggtcttgaaattttatttagcacactattga 17997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 116; Significance: 7e-59; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 221 - 396
Target Start/End: Complemental strand, 480644 - 480469
Alignment:
Q  221 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 320  Q
    ||||||||||| ||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||| |||    
T  480644 catgggcggttccaccgtgtagcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta 480545  T
Q  321 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 396  Q
     ||||||||||||||||||||| |||||||| ||||||| |||||||||| |||||||||||| |||||| |||||    
T  480544 taaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattga 480469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2142 (Bit Score: 112; Significance: 2e-56; HSPs: 1)
Name: scaffold2142
Description:

Target: scaffold2142; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 221 - 396
Target Start/End: Original strand, 502 - 677
Alignment:
Q  221 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 320  Q
    ||||||||||| ||||||   |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||| |||    
T  502 catgggcggttccaccgtgtagcgatcccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta 601  T
Q  321 caaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 396  Q
     ||||||||||||||||||||| |||||||| ||||||| |||||||||| |||||||||||| |||||| |||||    
T  602 taaaaagaaaaatttgggcaatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattga 677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0769 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0769
Description:

Target: scaffold0769; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 224 - 271
Target Start/End: Original strand, 1260 - 1307
Alignment:
Q  224 gggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatc 271  Q
    ||||||||| |||| |||||||||||||||||||||||||||||||||    
T  1260 gggcggttttaccgcccggcgaccccgggcggtcgcccgggctcgatc 1307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 332
Target Start/End: Original strand, 194021 - 194118
Alignment:
Q  234 accgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttacaaaaagaaaaa 332  Q
    |||| |||||||||||||||||||||||||||||||||  ||||||   |||||||| | ||||| | | ||| ||| |||||||| |||||| |||||    
T  194021 accgcccggcgaccccgggcggtcgcccgggctcgatccgtaatttcctcacattaggcccaacctataggcccatttacacactt-caaaaaaaaaaa 194118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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