View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10161_low_27 (Length: 268)
Name: NF10161_low_27
Description: NF10161
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10161_low_27 |
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Alignment Details
Target: chr5 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 9214133 - 9214388
Alignment:
| Q |
1 |
ctatatgaatagattagagaaaaggacactaatgg-------attatcaatttgatctcttacaattacaacctattctatcaaacctcagtcgtttcgt |
93 |
Q |
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| T |
9214133 |
ctatatgaatagattagagaaaaggacattaatggtcaatggattatcaatttgatctcttacaattacaacctattctatcaaacctcagtcgt----- |
9214227 |
T |
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| Q |
94 |
ttgattgatctaatggctaagagtattattatatctcttagacttatgacaatcaacaataatttaacatagtgtttgagaattgaattagaacctgatc |
193 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9214228 |
ttgattgatctaatggctaagagtattattatatctcttagacttatgacaatcaacaataatttaacatagtgtttgagaattgaattagaacctgatc |
9214327 |
T |
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| Q |
194 |
caactttgtacatataaggtatgttaattgcaccaggagcgtgtccagcattaaactcttc |
254 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9214328 |
caactttgtacatataaggtatgttaattgcaccaggagcgtgtccagcattaaactcttc |
9214388 |
T |
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