View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10161_low_31 (Length: 250)

Name: NF10161_low_31
Description: NF10161
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10161_low_31
NF10161_low_31
[»] chr1 (26 HSPs)
chr1 (1-234)||(44822090-44822323)
chr1 (1-223)||(24723420-24723642)
chr1 (17-127)||(7052007-7052117)
chr1 (95-224)||(22823265-22823394)
chr1 (132-233)||(22350529-22350630)
chr1 (150-228)||(21188142-21188220)
chr1 (1-56)||(16058383-16058437)
chr1 (1-68)||(51324420-51324487)
chr1 (130-224)||(20708149-20708243)
chr1 (1-56)||(19676639-19676694)
chr1 (1-56)||(21046118-21046173)
chr1 (132-224)||(39061188-39061280)
chr1 (1-68)||(7320663-7320730)
chr1 (1-56)||(42912977-42913032)
chr1 (157-223)||(46197862-46197927)
chr1 (154-223)||(7702983-7703052)
chr1 (12-56)||(20633714-20633758)
chr1 (21-60)||(8276079-8276118)
chr1 (21-60)||(38056762-38056801)
chr1 (157-223)||(29763749-29763814)
chr1 (157-223)||(50001346-50001411)
chr1 (150-223)||(7052122-7052195)
chr1 (1-54)||(22350646-22350699)
chr1 (21-60)||(4595935-4595974)
chr1 (1-38)||(13302847-13302884)
chr1 (157-193)||(34392666-34392702)
[»] chr2 (39 HSPs)
chr2 (1-234)||(24884220-24884453)
chr2 (1-223)||(1383612-1383834)
chr2 (19-236)||(22501717-22501935)
chr2 (19-236)||(22509651-22509869)
chr2 (1-148)||(357717-357864)
chr2 (150-236)||(45535783-45535869)
chr2 (150-236)||(19647091-19647177)
chr2 (132-233)||(18388328-18388429)
chr2 (86-224)||(25584347-25584486)
chr2 (163-231)||(45535658-45535726)
chr2 (150-236)||(45528398-45528484)
chr2 (132-236)||(20006063-20006167)
chr2 (1-56)||(5031198-5031253)
chr2 (1-56)||(9975857-9975912)
chr2 (1-56)||(17307414-17307469)
chr2 (1-56)||(22251517-22251572)
chr2 (1-56)||(24516114-24516169)
chr2 (1-56)||(24780909-24780964)
chr2 (157-223)||(12626548-12626614)
chr2 (1-54)||(25142133-25142186)
chr2 (1-56)||(19201269-19201324)
chr2 (1-56)||(27484546-27484601)
chr2 (1-56)||(40912248-40912303)
chr2 (1-60)||(3539760-3539819)
chr2 (1-56)||(24436576-24436631)
chr2 (1-56)||(36841192-36841247)
chr2 (154-223)||(28652664-28652733)
chr2 (141-189)||(28345136-28345184)
chr2 (4-54)||(19358820-19358871)
chr2 (1-56)||(37270627-37270682)
chr2 (157-223)||(18358084-18358149)
chr2 (157-223)||(21081086-21081151)
chr2 (173-223)||(21915494-21915544)
chr2 (157-231)||(23801355-23801429)
chr2 (157-223)||(25184059-25184124)
chr2 (1-54)||(18388259-18388312)
chr2 (1-46)||(27852605-27852650)
chr2 (1-53)||(2523816-2523868)
chr2 (1-49)||(22259974-22260021)
[»] chr5 (17 HSPs)
chr5 (1-228)||(31456716-31456943)
chr5 (22-223)||(30138064-30138265)
chr5 (1-223)||(36508702-36508925)
chr5 (95-236)||(17875914-17876055)
chr5 (1-144)||(17876044-17876186)
chr5 (148-223)||(21504009-21504084)
chr5 (1-56)||(7484930-7484985)
chr5 (1-56)||(19921566-19921621)
chr5 (1-56)||(21300113-21300168)
chr5 (157-223)||(265908-265973)
chr5 (157-223)||(17011598-17011663)
chr5 (157-223)||(29448710-29448775)
chr5 (4-54)||(21405700-21405751)
chr5 (2-52)||(31251961-31252011)
chr5 (18-56)||(31622053-31622091)
chr5 (23-56)||(20566482-20566515)
chr5 (1-50)||(21617998-21618047)
[»] scaffold0230 (1 HSPs)
scaffold0230 (1-236)||(6754-6989)
[»] chr7 (43 HSPs)
chr7 (15-223)||(14274093-14274301)
chr7 (1-111)||(47974889-47974999)
chr7 (25-127)||(708523-708625)
chr7 (98-223)||(12754721-12754847)
chr7 (154-236)||(42565945-42566027)
chr7 (132-236)||(33060296-33060398)
chr7 (131-224)||(21661124-21661217)
chr7 (1-56)||(20620214-20620269)
chr7 (133-223)||(47974983-47975073)
chr7 (1-56)||(12127232-12127287)
chr7 (1-56)||(12322999-12323054)
chr7 (1-56)||(12465329-12465384)
chr7 (1-56)||(13147541-13147596)
chr7 (1-68)||(15095706-15095773)
chr7 (1-68)||(15140129-15140196)
chr7 (2-54)||(13698709-13698761)
chr7 (1-56)||(14180467-14180522)
chr7 (1-56)||(20214075-20214130)
chr7 (1-56)||(46386157-46386212)
chr7 (3-56)||(12372202-12372255)
chr7 (1-61)||(8135306-8135366)
chr7 (3-67)||(33002078-33002141)
chr7 (1-56)||(8851228-8851283)
chr7 (1-56)||(10277255-10277310)
chr7 (1-56)||(11067396-11067451)
chr7 (1-60)||(13132390-13132449)
chr7 (1-56)||(32433658-32433713)
chr7 (1-44)||(35771511-35771554)
chr7 (157-223)||(32160317-32160382)
chr7 (153-189)||(37539352-37539388)
chr7 (1-52)||(12557853-12557904)
chr7 (157-223)||(16550119-16550184)
chr7 (157-223)||(16615478-16615543)
chr7 (2-52)||(41284963-41285013)
chr7 (26-67)||(17070384-17070425)
chr7 (1-53)||(15623950-15624002)
chr7 (5-56)||(16999361-16999413)
chr7 (141-189)||(19195096-19195144)
chr7 (1-60)||(48807395-48807454)
chr7 (1-39)||(12754681-12754719)
chr7 (157-223)||(13315197-13315263)
chr7 (150-223)||(708630-708703)
chr7 (1-33)||(36685214-36685246)
[»] chr6 (24 HSPs)
chr6 (1-236)||(18585536-18585788)
chr6 (132-236)||(18982269-18982374)
chr6 (130-224)||(3006963-3007057)
chr6 (154-236)||(18459163-18459245)
chr6 (1-56)||(7827900-7827955)
chr6 (1-56)||(23150356-23150411)
chr6 (1-56)||(27330050-27330105)
chr6 (1-56)||(27390790-27390845)
chr6 (17-68)||(28948490-28948541)
chr6 (1-56)||(19655300-19655355)
chr6 (1-60)||(23501595-23501655)
chr6 (129-224)||(31166088-31166184)
chr6 (141-189)||(35057448-35057496)
chr6 (1-56)||(15890781-15890836)
chr6 (1-56)||(27125546-27125601)
chr6 (1-66)||(19401012-19401077)
chr6 (1-49)||(18703503-18703551)
chr6 (1-49)||(18709438-18709486)
chr6 (154-230)||(24506228-24506304)
chr6 (142-185)||(13285656-13285699)
chr6 (157-223)||(29045134-29045200)
chr6 (1-50)||(18928614-18928663)
chr6 (157-223)||(15891686-15891751)
chr6 (157-223)||(15900771-15900836)
[»] chr4 (26 HSPs)
chr4 (1-223)||(14549520-14549743)
chr4 (1-223)||(19434628-19434841)
chr4 (154-228)||(14477497-14477571)
chr4 (153-236)||(18462880-18462963)
chr4 (154-236)||(13164990-13165072)
chr4 (105-219)||(45314202-45314315)
chr4 (130-219)||(14353888-14353977)
chr4 (1-56)||(16998453-16998508)
chr4 (1-56)||(25091581-25091636)
chr4 (1-56)||(53630543-53630598)
chr4 (1-52)||(10356505-10356556)
chr4 (1-56)||(11425871-11425926)
chr4 (1-56)||(37019598-37019653)
chr4 (1-56)||(6633606-6633661)
chr4 (1-56)||(15115150-15115205)
chr4 (1-56)||(42875725-42875780)
chr4 (1-56)||(46001600-46001655)
chr4 (157-223)||(10694362-10694427)
chr4 (21-60)||(9638933-9638972)
chr4 (1-52)||(9924085-9924136)
chr4 (1-56)||(19610252-19610307)
chr4 (1-54)||(9870514-9870568)
chr4 (198-236)||(13043925-13043963)
chr4 (157-223)||(9622357-9622423)
chr4 (157-223)||(16296741-16296807)
chr4 (18-56)||(26921707-26921745)
[»] scaffold0040 (1 HSPs)
scaffold0040 (7-180)||(106126-106300)
[»] scaffold0338 (1 HSPs)
scaffold0338 (22-141)||(80-199)
[»] chr8 (36 HSPs)
chr8 (95-236)||(22344980-22345121)
chr8 (95-236)||(22356640-22356781)
chr8 (111-236)||(20517126-20517251)
chr8 (150-236)||(20879330-20879416)
chr8 (132-233)||(42265647-42265748)
chr8 (124-192)||(36305743-36305811)
chr8 (1-56)||(5082281-5082336)
chr8 (1-56)||(19140693-19140748)
chr8 (1-68)||(22532201-22532268)
chr8 (1-68)||(22536886-22536953)
chr8 (163-229)||(21676713-21676779)
chr8 (2-70)||(22317981-22318049)
chr8 (1-56)||(5761462-5761517)
chr8 (1-56)||(6573125-6573180)
chr8 (1-56)||(20083707-20083762)
chr8 (160-223)||(22483650-22483713)
chr8 (130-192)||(22708414-22708476)
chr8 (1-56)||(6101822-6101877)
chr8 (1-56)||(6202704-6202759)
chr8 (1-60)||(31722563-31722622)
chr8 (1-56)||(37292633-37292688)
chr8 (1-56)||(39936079-39936134)
chr8 (1-56)||(42817976-42818031)
chr8 (1-60)||(45469289-45469348)
chr8 (157-223)||(25657631-25657696)
chr8 (1-56)||(20178598-20178654)
chr8 (21-60)||(20022122-20022161)
chr8 (157-223)||(16198706-16198771)
chr8 (1-55)||(39694346-39694400)
chr8 (158-223)||(23478952-23479016)
chr8 (1-54)||(42265578-42265631)
chr8 (157-223)||(19880693-19880758)
chr8 (157-223)||(22610382-22610448)
chr8 (157-223)||(26454576-26454641)
chr8 (86-119)||(20517120-20517153)
chr8 (144-192)||(21678947-21678995)
[»] scaffold0026 (3 HSPs)
scaffold0026 (80-223)||(21992-22135)
scaffold0026 (80-192)||(9926-10038)
scaffold0026 (1-56)||(146651-146706)
[»] scaffold0156 (1 HSPs)
scaffold0156 (1-103)||(16485-16587)
[»] scaffold0149 (3 HSPs)
scaffold0149 (1-111)||(21484-21594)
scaffold0149 (133-223)||(21410-21500)
scaffold0149 (1-55)||(29642-29696)
[»] chr3 (46 HSPs)
chr3 (114-236)||(13522422-13522543)
chr3 (157-236)||(48631189-48631268)
chr3 (114-223)||(6805000-6805109)
chr3 (150-229)||(3160735-3160814)
chr3 (115-193)||(24177843-24177921)
chr3 (157-236)||(12155143-12155222)
chr3 (132-236)||(12151040-12151142)
chr3 (1-68)||(9510985-9511052)
chr3 (1-68)||(9518960-9519027)
chr3 (1-56)||(10563636-10563691)
chr3 (1-56)||(17044894-17044949)
chr3 (1-56)||(17518942-17518997)
chr3 (1-56)||(17533804-17533859)
chr3 (1-56)||(40807924-40807979)
chr3 (1-56)||(49900658-49900713)
chr3 (1-56)||(50348095-50348150)
chr3 (80-130)||(6804985-6805035)
chr3 (157-223)||(45803453-45803519)
chr3 (64-121)||(13522391-13522448)
chr3 (1-49)||(35064610-35064658)
chr3 (1-56)||(22306652-22306707)
chr3 (1-56)||(40812761-40812816)
chr3 (1-56)||(41172440-41172495)
chr3 (130-192)||(6003085-6003147)
chr3 (1-67)||(19568277-19568343)
chr3 (1-54)||(11563654-11563707)
chr3 (1-56)||(10311455-10311510)
chr3 (1-44)||(13185834-13185877)
chr3 (1-56)||(17539034-17539089)
chr3 (1-52)||(35960998-35961049)
chr3 (1-56)||(44274346-44274401)
chr3 (1-50)||(17694001-17694050)
chr3 (1-54)||(42324041-42324094)
chr3 (1-66)||(49968928-49968993)
chr3 (4-56)||(35354530-35354582)
chr3 (1-56)||(11259359-11259414)
chr3 (1-55)||(14508775-14508830)
chr3 (1-56)||(17047054-17047109)
chr3 (1-52)||(33565018-33565069)
chr3 (157-223)||(16979782-16979847)
chr3 (21-60)||(14641638-14641677)
chr3 (2-49)||(15931577-15931624)
chr3 (157-223)||(22652643-22652708)
chr3 (1-43)||(24177805-24177847)
chr3 (1-54)||(37038978-37039032)
chr3 (7-54)||(22146832-22146880)
[»] scaffold0439 (3 HSPs)
scaffold0439 (114-236)||(12098-12219)
scaffold0439 (1-55)||(12323-12377)
scaffold0439 (61-102)||(12212-12253)
[»] scaffold0007 (4 HSPs)
scaffold0007 (132-236)||(18950-19055)
scaffold0007 (143-228)||(158971-159056)
scaffold0007 (132-183)||(16667-16718)
scaffold0007 (1-54)||(158891-158944)
[»] scaffold0180 (2 HSPs)
scaffold0180 (132-233)||(28467-28568)
scaffold0180 (1-54)||(28398-28451)
[»] scaffold0116 (2 HSPs)
scaffold0116 (132-233)||(35602-35703)
scaffold0116 (1-54)||(35533-35586)
[»] scaffold0021 (2 HSPs)
scaffold0021 (148-229)||(16971-17052)
scaffold0021 (148-229)||(26502-26583)
[»] scaffold0092 (1 HSPs)
scaffold0092 (132-236)||(38534-38637)
[»] scaffold0058 (1 HSPs)
scaffold0058 (150-229)||(59764-59843)
[»] scaffold0139 (2 HSPs)
scaffold0139 (95-192)||(40276-40373)
scaffold0139 (86-144)||(40248-40306)
[»] scaffold0217 (1 HSPs)
scaffold0217 (154-228)||(28579-28653)
[»] scaffold1800 (1 HSPs)
scaffold1800 (132-236)||(463-567)
[»] scaffold0848 (1 HSPs)
scaffold0848 (1-66)||(2090-2155)
[»] scaffold0308 (1 HSPs)
scaffold0308 (132-217)||(13269-13354)
[»] scaffold1941 (1 HSPs)
scaffold1941 (1-56)||(66-121)
[»] scaffold1283 (1 HSPs)
scaffold1283 (1-56)||(537-592)
[»] scaffold0241 (2 HSPs)
scaffold0241 (1-56)||(2492-2547)
scaffold0241 (1-56)||(3110-3165)
[»] scaffold0125 (2 HSPs)
scaffold0125 (130-225)||(18201-18296)
scaffold0125 (130-162)||(7314-7346)
[»] scaffold0017 (2 HSPs)
scaffold0017 (129-224)||(26560-26655)
scaffold0017 (132-236)||(23470-23573)
[»] scaffold0632 (1 HSPs)
scaffold0632 (2-56)||(1093-1147)
[»] scaffold0555 (1 HSPs)
scaffold0555 (141-223)||(8897-8979)
[»] scaffold0394 (1 HSPs)
scaffold0394 (154-236)||(7626-7708)
[»] scaffold0111 (2 HSPs)
scaffold0111 (2-56)||(12603-12657)
scaffold0111 (1-56)||(5311-5366)
[»] scaffold0004 (2 HSPs)
scaffold0004 (6-56)||(328364-328414)
scaffold0004 (19-56)||(72872-72909)
[»] scaffold0001 (3 HSPs)
scaffold0001 (2-56)||(31922-31976)
scaffold0001 (2-56)||(37229-37283)
scaffold0001 (1-56)||(77615-77670)
[»] scaffold0037 (3 HSPs)
scaffold0037 (1-57)||(113037-113093)
scaffold0037 (1-50)||(81501-81550)
scaffold0037 (21-57)||(117890-117926)
[»] scaffold1766 (1 HSPs)
scaffold1766 (1-56)||(765-820)
[»] scaffold1633 (1 HSPs)
scaffold1633 (1-56)||(1133-1188)
[»] scaffold0737 (1 HSPs)
scaffold0737 (1-56)||(4783-4838)
[»] scaffold0407 (1 HSPs)
scaffold0407 (1-56)||(11343-11398)
[»] scaffold0080 (1 HSPs)
scaffold0080 (1-56)||(21862-21917)
[»] scaffold0077 (1 HSPs)
scaffold0077 (1-56)||(34267-34322)
[»] scaffold0064 (1 HSPs)
scaffold0064 (1-56)||(58674-58729)
[»] scaffold1939 (1 HSPs)
scaffold1939 (157-219)||(1-63)
[»] scaffold0113 (2 HSPs)
scaffold0113 (161-223)||(35362-35424)
scaffold0113 (9-56)||(35420-35467)
[»] scaffold0337 (1 HSPs)
scaffold0337 (150-230)||(3068-3148)
[»] scaffold0175 (1 HSPs)
scaffold0175 (1-68)||(8557-8625)
[»] scaffold0334 (1 HSPs)
scaffold0334 (1-56)||(446-501)
[»] scaffold0207 (1 HSPs)
scaffold0207 (1-56)||(13461-13516)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-68)||(3121-3188)
[»] scaffold0020 (2 HSPs)
scaffold0020 (1-56)||(169068-169123)
scaffold0020 (1-56)||(143539-143594)
[»] scaffold0462 (3 HSPs)
scaffold0462 (141-223)||(11093-11173)
scaffold0462 (141-189)||(1174-1222)
scaffold0462 (141-189)||(6680-6728)
[»] scaffold0057 (1 HSPs)
scaffold0057 (157-231)||(69970-70043)
[»] scaffold0046 (1 HSPs)
scaffold0046 (158-223)||(21895-21959)
[»] scaffold0083 (3 HSPs)
scaffold0083 (19-67)||(10840-10888)
scaffold0083 (157-223)||(1807-1872)
scaffold0083 (21-53)||(5124-5156)
[»] scaffold0859 (1 HSPs)
scaffold0859 (2-61)||(4605-4664)
[»] scaffold0328 (1 HSPs)
scaffold0328 (21-60)||(18731-18770)
[»] scaffold0220 (1 HSPs)
scaffold0220 (21-60)||(13872-13911)
[»] scaffold0008 (1 HSPs)
scaffold0008 (1-68)||(135573-135640)
[»] scaffold0515 (1 HSPs)
scaffold0515 (157-211)||(4911-4964)
[»] scaffold0436 (1 HSPs)
scaffold0436 (157-223)||(8830-8895)
[»] scaffold0306 (1 HSPs)
scaffold0306 (157-211)||(4911-4964)
[»] scaffold0165 (1 HSPs)
scaffold0165 (154-236)||(31787-31869)
[»] scaffold0138 (1 HSPs)
scaffold0138 (157-223)||(20967-21032)
[»] scaffold0061 (2 HSPs)
scaffold0061 (157-223)||(14703-14768)
scaffold0061 (157-223)||(23761-23826)
[»] scaffold0034 (1 HSPs)
scaffold0034 (157-223)||(29333-29398)
[»] scaffold0023 (1 HSPs)
scaffold0023 (198-236)||(163192-163230)
[»] scaffold0174 (2 HSPs)
scaffold0174 (19-56)||(11318-11355)
scaffold0174 (19-56)||(5198-5235)
[»] scaffold0213 (1 HSPs)
scaffold0213 (141-189)||(19019-19066)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-45)||(78254-78298)
[»] scaffold0019 (1 HSPs)
scaffold0019 (1-36)||(24200-24235)
[»] scaffold1434 (1 HSPs)
scaffold1434 (130-224)||(1449-1543)
[»] scaffold1102 (1 HSPs)
scaffold1102 (130-192)||(2041-2103)
[»] scaffold0594 (1 HSPs)
scaffold0594 (157-223)||(2110-2176)
[»] scaffold0035 (1 HSPs)
scaffold0035 (141-223)||(43888-43969)
[»] scaffold0285 (1 HSPs)
scaffold0285 (19-56)||(19689-19726)
[»] scaffold0047 (1 HSPs)
scaffold0047 (23-56)||(78992-79025)
[»] scaffold0251 (1 HSPs)
scaffold0251 (1-49)||(20155-20202)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-60)||(67043-67103)


Alignment Details
Target: chr1 (Bit Score: 222; Significance: 1e-122; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 44822090 - 44822323
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaatgaagtt 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44822090 gtaggttgtagttctggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaatgaagtt 44822189  T
Q  101 agggttgtgaaaagaagttagagttttgaaaagaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44822190 agggttgtgaaaagaagttagagttttgaaaagaagttagggttttgaattgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaa 44822289  T
Q  201 ttgatgtttaggttgtagaataacaataggtgat 234  Q
    |||||||| |||||||||||||||||||||||||    
T  44822290 ttgatgttcaggttgtagaataacaataggtgat 44822323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 24723420 - 24723642
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaatgaagtt 100  Q
    |||| |||||||| |||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  24723420 gtagattgtagttttggaaatttgagaattatgtttagaagttgtaattggttgttttaattgtagaattgattgttgaaattaagatgttaatgaagtt 24723519  T
Q  101 agggttgtgaaaagaagttagagttttgaaaagaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaa 200  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||| | ||||||||||||||||||||| ||| |||||   |||||||||  ||  ||    
T  24723520 agggttgtgaaaagaagttagagttttaaaaagaagttatggtttttaattgcaatttgattgttgaaagagtatgtaatatgatgaattaaggtaataa 24723619  T
Q  201 ttgatgtttaggttgtagaataa 223  Q
    ||| |||| ||||||||||||||    
T  24723620 ttggtgttcaggttgtagaataa 24723642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 17 - 127
Target Start/End: Original strand, 7052007 - 7052117
Alignment:
Q  17 gaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaatgaagttagggttgtgaaaagaa 116  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||| | |||||||    
T  7052007 gaaatttgggaattaggtttagaaattgtaattggttgttttaattgtagaattgattgttgaaattaagatgttaaagaagttagagttttaaaaagaa 7052106  T
Q  117 gttagagtttt 127  Q
    ||||| |||||    
T  7052107 gttagggtttt 7052117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 95 - 224
Target Start/End: Original strand, 22823265 - 22823394
Alignment:
Q  95 gaagttagggttgtgaaaagaagttagagttttgaaaagaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaaca 194  Q
    |||||||||||| |||||||| ||||| |||||||||||||| ||||||||||| ||||||||||||| ||||||||||| ||||| | |||||||||      
T  22823265 gaagttagggttttgaaaagaggttagggttttgaaaagaagatagggttttgaattgcaatttgattcttgaaagtgtaagtaattcgatgaattaatg 22823364  T
Q  195 tatgaattgatgtttaggttgtagaataac 224  Q
    |   | ||||||||||||||||||| ||||    
T  22823365 tgaaagttgatgtttaggttgtagagtaac 22823394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 22350630 - 22350529
Alignment:
Q  132 agaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggt 231  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||| |||  |||||||||| |||||||||| ||| |||| ||    
T  22350630 agaagttagggttttgaattgcaatttgattgttgaaggtgtaggtaattcaatgaattaatataaaaattgatgttcaggttgtagagtaataataagt 22350531  T
Q  232 ga 233  Q
    ||    
T  22350530 ga 22350529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 150 - 228
Target Start/End: Original strand, 21188142 - 21188220
Alignment:
Q  150 ttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaata 228  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||  |||||||||| |||||||||||||| ||||    
T  21188142 ttgcaatttgattgttgaaagtgtaggtaatccaatgaattaatataaaaattgatgttcaggttgtagaataagaata 21188220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 16058383 - 16058437
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  16058383 gtaggttgtagttatggaaatttgggaattaggttt-gaagttgtaattggttgtt 16058437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 51324487 - 51324420
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaa 68  Q
    ||||||||||||| ||| || |||||||||||||||| ||||||||||||||||||||||| ||||||    
T  51324487 gtaggttgtagttttgggaaattgggaattaggtttaaaagttgtaattggttgttttaatagtagaa 51324420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 130 - 224
Target Start/End: Original strand, 20708149 - 20708243
Alignment:
Q  130 aaagaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataac 224  Q
    |||||| |||||||||||| ||||||||||||| ||||||||||| |||||||||| ||||||  |   | ||||||||||||||||||| ||||    
T  20708149 aaagaaattagggttttgaattgcaatttgattcttgaaagtgtaagtaatccaataaattaatgtgaaagttgatgtttaggttgtagagtaac 20708243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 19676694 - 19676639
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||  |||||||||||||||||| |||||||||||||||||||    
T  19676694 gtaggttgtagttatgagaatttgggaattaggttttgaagttgtaattggttgtt 19676639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 21046118 - 21046173
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||    
T  21046118 gtaggttgtagttatgggaatttgggaattaagttttgaagttgtaattggttgtt 21046173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 224
Target Start/End: Complemental strand, 39061280 - 39061188
Alignment:
Q  132 agaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataac 224  Q
    |||| |||||||||||| ||| ||||||||| ||||||||||| ||||||| |||||||||  |   | ||||||||||||||||||| ||||    
T  39061280 agaatttagggttttgaattgtaatttgattcttgaaagtgtaagtaatccgatgaattaatgtgaaagttgatgtttaggttgtagagtaac 39061188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 7320663 - 7320730
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaa 68  Q
    |||| |||||||| ||| ||||||||||||| ||||||| |||||||||||||| |||||| ||||||    
T  7320663 gtagattgtagttttgggaatttgggaattatgtttagatgttgtaattggttgatttaatagtagaa 7320730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 42913032 - 42912977
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||| ||| ||||| |||||||||||| |||||||||||||||||||    
T  42913032 gtaggttgtagttgtgggaatttaggaattaggttttgaagttgtaattggttgtt 42912977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 223
Target Start/End: Original strand, 46197862 - 46197927
Alignment:
Q  157 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    ||||||||| |||| ||||||||||||||||||||||||| ||||||| ||| ||| ||||||||||    
T  46197862 ttgattgtt-aaagagtaggtaatccaatgaattaacataagaattgaagttcaggctgtagaataa 46197927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 223
Target Start/End: Complemental strand, 7703052 - 7702983
Alignment:
Q  154 aatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    ||||||||||||||||||||||||||||||||| || |   |   |||||||||||||||||||||||||    
T  7703052 aatttgattgttgaaagtgtaggtaatccaatggatcattgtgaaaattgatgtttaggttgtagaataa 7702983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 20633714 - 20633758
Alignment:
Q  12 ttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    |||||| |||||||||||||||||| |||||||||||||||||||    
T  20633714 ttatgggaatttgggaattaggttttgaagttgtaattggttgtt 20633758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 8276079 - 8276118
Alignment:
Q  21 tttgggaattaggtttagaagttgtaattggttgttttaa 60  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  8276079 tttgggaattaggtttagaagttgtaattggttgatttaa 8276118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 38056762 - 38056801
Alignment:
Q  21 tttgggaattaggtttagaagttgtaattggttgttttaa 60  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  38056762 tttgggaattaggtttagaagttgtaattggttgatttaa 38056801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 223
Target Start/End: Original strand, 29763749 - 29763814
Alignment:
Q  157 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    ||||||||| |||| ||||||||| ||||||||||||||| ||||||| ||||||  ||||||||||    
T  29763749 ttgattgtt-aaagagtaggtaatacaatgaattaacataagaattgaagtttagactgtagaataa 29763814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 50001411 - 50001346
Alignment:
Q  157 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    ||||||||| |||| ||||||||| ||||||||||||||| ||||||| ||| ||| ||||||||||    
T  50001411 ttgattgtt-aaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataa 50001346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 7052122 - 7052195
Alignment:
Q  150 ttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    ||||||||||||||||||||| ||||||||||  |||||||||  ||  ||||| |||| |||||||| |||||    
T  7052122 ttgcaatttgattgttgaaagagtaggtaatctgatgaattaaggtaataattggtgttcaggttgtaaaataa 7052195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 22350699 - 22350646
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttg 54  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||| || ||||||    
T  22350699 gtaggttgtagttttgggaatttgggaattagggttagaagttgcaaatggttg 22350646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 4595935 - 4595974
Alignment:
Q  21 tttgggaattaggtttagaagttgtaattggttgttttaa 60  Q
    |||||||||||| ||||||||||||||||||||| |||||    
T  4595935 tttgggaattagatttagaagttgtaattggttgatttaa 4595974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 13302884 - 13302847
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttag 38  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  13302884 gtaggttgtagttttgggaatttgggaattaggtttag 13302847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 193
Target Start/End: Complemental strand, 34392702 - 34392666
Alignment:
Q  157 ttgattgttgaaagtgtaggtaatccaatgaattaac 193  Q
    |||||||||||||| |||||||||||| |||||||||    
T  34392702 ttgattgttgaaagagtaggtaatccattgaattaac 34392666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 198; Significance: 1e-108; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 24884453 - 24884220
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaatgaagtt 100  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||    
T  24884453 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtcttaattgtagaattgattgttggaattaagatattaatgaagtt 24884354  T
Q  101 agggttgtgaaaagaagttagagttttgaaaagaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaa 200  Q
    ||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24884353 aggtttgtgaaaagaagttagaattttgaaaagaagttagggttttgaattgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaa 24884254  T
Q  201 ttgatgtttaggttgtagaataacaataggtgat 234  Q
    |||||||| ||||| |||||||||||||||||||    
T  24884253 ttgatgttcaggttatagaataacaataggtgat 24884220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 1383612 - 1383834
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaatgaagtt 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  1383612 gtaggttgtagttttggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgtagaaattaagatgttaatgaagtt 1383711  T
Q  101 agggttgtgaaaagaagttagagttttgaaaagaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||| ||  ||    
T  1383712 agggttgtgaaaagaagttagagttttgaaaagaagttagggttttgaattgcaatttgattgttgaaagagtaggtaatccgatgaattaacgtaataa 1383811  T
Q  201 ttgatgtttaggttgtagaataa 223  Q
    ||| | || ||||||||||||||    
T  1383812 ttggtcttcaggttgtagaataa 1383834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 19 - 236
Target Start/End: Complemental strand, 22501935 - 22501717
Alignment:
Q  19 aatttgggaa-ttaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaatgaagttagggttgtgaaaagaag 117  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22501935 aatttgggaaattagggttagaagttgtgattggttgttttaattgtaaaattgattgttggaattaagatgttaacgaagttagggttgtgaaaagaag 22501836  T
Q  118 ttagagttttgaaaagaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgta 217  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||     
T  22501835 ttagagttttgaaaagaagttagggttttgaattgcaatttgtttgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgttcaagttgtg 22501736  T
Q  218 gaataacaataggtgatgt 236  Q
    ||||||||||| |||||||    
T  22501735 gaataacaatatgtgatgt 22501717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 19 - 236
Target Start/End: Complemental strand, 22509869 - 22509651
Alignment:
Q  19 aatttgggaa-ttaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaatgaagttagggttgtgaaaagaag 117  Q
    |||||||||| ||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22509869 aatttgggaaattagggttagaagttgtgattggttgttttaattgtaaaattgattgttggaattaagatgttaacgaagttagggttgtgaaaagaag 22509770  T
Q  118 ttagagttttgaaaagaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgta 217  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||     
T  22509769 ttagagttttgaaaagaagttagggttttgaattgcaatttgtttgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgttcaagttgtg 22509670  T
Q  218 gaataacaataggtgatgt 236  Q
    ||||||||||| |||||||    
T  22509669 gaataacaatatgtgatgt 22509651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 357864 - 357717
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaatgaagtt 100  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  357864 gtaggttgtagtttttgaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttgaaattaagatgttaatgaagtt 357765  T
Q  101 agggttgtgaaaagaagttagagttttgaaaagaagttagggttttga 148  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||    
T  357764 agggttgtgaaaagaagttagagttttgaaaagaagttagagttttga 357717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 150 - 236
Target Start/End: Complemental strand, 45535869 - 45535783
Alignment:
Q  150 ttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtgatgt 236  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||| ||||    
T  45535869 ttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacataaaaattgatgttcaggttgtagaataacaataggtaatgt 45535783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 150 - 236
Target Start/End: Complemental strand, 19647177 - 19647091
Alignment:
Q  150 ttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtgatgt 236  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||    
T  19647177 ttgcaaattgattgttgaaaatgtaggtaatccaatgaattaacataagaattgatgttcaggttgtagaataacaataggtaatgt 19647091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 18388328 - 18388429
Alignment:
Q  132 agaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggt 231  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||  |||||||||| |||||||||| ||| |||| ||    
T  18388328 agaagttagggttttgaattgcaatttgattgttgaaggtgtaggtaatccaatgaattaatataaaaattgatgttcaggttgtagagtaataataagt 18388427  T
Q  232 ga 233  Q
    ||    
T  18388428 ga 18388429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 86 - 224
Target Start/End: Original strand, 25584347 - 25584486
Alignment:
Q  86 gatgttaatgaagttagggttgtgaaaagaagttagagttttgaaaagaagttaggg-ttttgatttgcaatttgattgttgaaagtgtaggtaatccaa 184  Q
    |||||||  |||||||||||| |||||||||||||| ||| |||||||||||||||| |||||| || |||||||||| ||||||||||| ||||||| |    
T  25584347 gatgttatagaagttagggttttgaaaagaagttagggttgtgaaaagaagttaggggttttgaattacaatttgattcttgaaagtgtaagtaatccga 25584446  T
Q  185 tgaattaacatatgaattgatgtttaggttgtagaataac 224  Q
    ||||||||  |   | ||||||||||||||||||| ||||    
T  25584447 tgaattaatgtgaaagttgatgtttaggttgtagagtaac 25584486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 163 - 231
Target Start/End: Complemental strand, 45535726 - 45535658
Alignment:
Q  163 gttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggt 231  Q
    ||||||||||||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||    
T  45535726 gttgaaagtgtaggtaatccaatgaattaacataaaaattgatgttcaggttgtagaataacaataggt 45535658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 236
Target Start/End: Complemental strand, 45528484 - 45528398
Alignment:
Q  150 ttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtgatgt 236  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||   |||||||||| ||||| |||||||||||||||| ||||    
T  45528484 ttgcaatttgattgttgaaagtgtatgtaatcaaatgaattaacattaaaattgatgttcaggttatagaataacaataggtaatgt 45528398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 132 - 236
Target Start/End: Original strand, 20006063 - 20006167
Alignment:
Q  132 agaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacat--atgaattgatgtttaggttgtagaataacaatag 229  Q
    ||||||||||  ||||| |||||||||||||||||||||||||||||||| |||||||||| ||  |  || ||||||| | ||||||||||||||||||    
T  20006063 agaagttagg--tttgaattgcaatttgattgttgaaagtgtaggtaatcgaatgaattaatataaaaaaaatgatgttcatgttgtagaataacaatag 20006160  T
Q  230 gtgatgt 236  Q
    || ||||    
T  20006161 gtaatgt 20006167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 5031198 - 5031253
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  5031198 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 5031253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 9975912 - 9975857
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  9975912 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 9975857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 17307469 - 17307414
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  17307469 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 17307414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 22251517 - 22251572
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  22251517 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 22251572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 24516169 - 24516114
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  24516169 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 24516114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 24780909 - 24780964
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  24780909 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 24780964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 223
Target Start/End: Original strand, 12626548 - 12626614
Alignment:
Q  157 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    |||||||||||||| ||||||||||| ||||||||||| | ||||||||||| ||||||||||||||    
T  12626548 ttgattgttgaaagagtaggtaatccgatgaattaacagaagaattgatgttcaggttgtagaataa 12626614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 25142186 - 25142133
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttg 54  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  25142186 gtaggttgtagttttgggaatttgggaattaggtttagaagttgtaattggttg 25142133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 19201269 - 19201324
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||| | |||||||||||||||||| |||||||||||||||||||    
T  19201269 gtaggttgtagttataggaatttgggaattaggttttgaagttgtaattggttgtt 19201324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 27484546 - 27484601
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||    
T  27484546 gtaggttgtagttatgggaatttgggaattaagttttgaagttgtaattggttgtt 27484601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 40912303 - 40912248
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||    
T  40912303 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtagttggttgtt 40912248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 3539819 - 3539760
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaa 60  Q
    ||||||||||||| | | |||||| ||||||||||||||||||||||||||||| |||||    
T  3539819 gtaggttgtagtttttggaatttgagaattaggtttagaagttgtaattggttgatttaa 3539760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 24436631 - 24436576
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| ||||||| |||||||||| |||||||||||| ||||||    
T  24436631 gtaggttgtagttatgggaatttggaaattaggttttgaagttgtaattagttgtt 24436576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 36841247 - 36841192
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| ||||| | |||||||||| |||||||||||||||||||    
T  36841247 gtaggttgtagttatgggaatttagaaattaggttttgaagttgtaattggttgtt 36841192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 223
Target Start/End: Original strand, 28652664 - 28652733
Alignment:
Q  154 aatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    ||||| |||||| |||| |||||||||||||||||||||  ||  |||||||||| |||| |||||||||    
T  28652664 aatttaattgttaaaagagtaggtaatccaatgaattaaggtaataattgatgttcaggtagtagaataa 28652733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 189
Target Start/End: Original strand, 28345136 - 28345184
Alignment:
Q  141 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaat 189  Q
    |||||||| || |||||||||| || |||||||||||||||||||||||    
T  28345136 ggttttgaatttcaatttgatttttaaaagtgtaggtaatccaatgaat 28345184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 54
Target Start/End: Complemental strand, 19358871 - 19358820
Alignment:
Q  4 ggttgtagttatggaaatttgggaa-ttaggtttagaagttgtaattggttg 54  Q
    |||||||||| ||| |||||||||| ||||| ||||||||||||||||||||    
T  19358871 ggttgtagttttgggaatttgggaaattagggttagaagttgtaattggttg 19358820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 37270682 - 37270627
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||  |||||| |||||| |||| ||||||||||| |||||||    
T  37270682 gtaggttgtagttatgagaatttgagaattaagttttgaagttgtaatgggttgtt 37270627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 223
Target Start/End: Original strand, 18358084 - 18358149
Alignment:
Q  157 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    ||||||||| |||| ||| ||||| ||||||||||||||| ||||||| ||| ||| ||||||||||    
T  18358084 ttgattgtt-aaagagtatgtaattcaatgaattaacataagaattgaagttcaggctgtagaataa 18358149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 223
Target Start/End: Original strand, 21081086 - 21081151
Alignment:
Q  157 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    ||||||||| |||| ||||||||  ||||||||||||||| ||||||| ||| ||| ||||||||||    
T  21081086 ttgattgtt-aaagagtaggtaaaacaatgaattaacataagaattgaagttcaggctgtagaataa 21081151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 223
Target Start/End: Complemental strand, 21915544 - 21915494
Alignment:
Q  173 taggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    |||||||| ||||||||||||||| ||||||| ||| ||| ||||||||||    
T  21915544 taggtaattcaatgaattaacataagaattgaagttcaggctgtagaataa 21915494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 23801429 - 23801355
Alignment:
Q  157 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggt 231  Q
    |||||||||||||| |||||||| || |||||||||  ||  || || |||| |||||||||||||| |||||||    
T  23801429 ttgattgttgaaagagtaggtaacccgatgaattaaggtaataactggtgttcaggttgtagaataataataggt 23801355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 25184124 - 25184059
Alignment:
Q  157 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    ||||||||| |||| ||||||||| ||||||||||||||| ||||||| ||| ||  ||||||||||    
T  25184124 ttgattgtt-aaagagtaggtaattcaatgaattaacataagaattgaagttcagactgtagaataa 25184059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 18388259 - 18388312
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttg 54  Q
    ||||||||||||| ||| ||||||||||||| | |||||||||| || ||||||    
T  18388259 gtaggttgtagttttgggaatttgggaattatggttagaagttgcaaatggttg 18388312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 27852650 - 27852605
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgta 46  Q
    ||||||||| ||| ||| |||||||||||||| |||||||||||||    
T  27852650 gtaggttgttgttttgggaatttgggaattagatttagaagttgta 27852605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 2523816 - 2523868
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggtt 53  Q
    |||||||||| |||||| ||||||| ||||||||||  || ||||||||||||    
T  2523816 gtaggttgtatttatgggaatttggaaattaggtttttaaattgtaattggtt 2523868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 22260021 - 22259974
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaatt 49  Q
    |||||||||||||  |||| ||||||||||||| |||||||||||||||    
T  22260021 gtaggttgtagtttaggaa-tttgggaattaggcttagaagttgtaatt 22259974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 196; Significance: 1e-107; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 31456943 - 31456716
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaatgaagtt 100  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  31456943 gtaggttgtagttttggaaatttggaaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttgaaattaagatgttaatgaagtt 31456844  T
Q  101 agggttgtgaaaagaagttagagttttgaaaagaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaa 200  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  31456843 agggttgtgaaaagaagttagagttttgaaaagaagttagagctttgaattgcaatttgattgttgaaagtgtaggtaattcaatgaattaacatatgaa 31456744  T
Q  201 ttgatgtttaggttgtagaataacaata 228  Q
    |||||||| |||||||||||||||||||    
T  31456743 ttgatgttcaggttgtagaataacaata 31456716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 22 - 223
Target Start/End: Original strand, 30138064 - 30138265
Alignment:
Q  22 ttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaatgaagttagggttgtgaaaagaagttag 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30138064 ttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaatgaagttagggttgtgaaaagaagttag 30138163  T
Q  122 agttttgaaaagaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaat 221  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||| ||||||||||||    
T  30138164 agttttgaaaagaagttagggttttgaattgcaatttgattgttgaaagtgtaggcaatccaatgaattaacatatgatatgatgttcaggttgtagaat 30138263  T
Q  222 aa 223  Q
    ||    
T  30138264 aa 30138265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 36508702 - 36508925
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaatgaagtt 100  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  36508702 gtaggttgtagttttggaaatttgggaattatgtttagaagttgtaattggttgttttaattgtagaattgattgatgaaattaagatgttaatgaagtt 36508801  T
Q  101 agggttgtgaaaagaagttagagttttgaaaagaagttaggg-ttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatga 199  Q
    |||||| ||||||||||| |||||||| |||||||||||||| |||||| ||||||||||||||||||||| ||||||||||  |||||||||  ||  |    
T  36508802 agggttatgaaaagaagtaagagttttaaaaagaagttagggtttttgaattgcaatttgattgttgaaagagtaggtaatctgatgaattaaggtaata 36508901  T
Q  200 attgatgtttaggttgtagaataa 223  Q
    |||| |||||||||||||||||||    
T  36508902 attggtgtttaggttgtagaataa 36508925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 95 - 236
Target Start/End: Complemental strand, 17876055 - 17875914
Alignment:
Q  95 gaagttagggttgtgaaaagaagttagagttttgaaaagaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaaca 194  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  17876055 gaagttagggttgcgaaaagaagttagagttttgaagagaagttagggttttgaattgcaatttgattgttgaaagtgtaggtaatccaatgaattaaca 17875956  T
Q  195 tatgaattgatgtttaggttgtagaataacaataggtgatgt 236  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  17875955 tatgaattgatgttcaggttgtagaataacaataggtgatgt 17875914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 17876186 - 17876044
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaatgaagtt 100  Q
    ||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  17876186 gtaggttgtagttctgaaaatttgggaattaggtttagaagttgtaattggttgtcttaattgtagaattgattgttggaattaagatgttaatg-agtt 17876088  T
Q  101 agggttgtgaaaagaagttagagttttgaaaagaagttagggtt 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  17876087 agggttgtgaaaagaagttagagttttgaaaagaagttagggtt 17876044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 21504084 - 21504009
Alignment:
Q  148 atttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    |||||||| || ||||||||||| |||||| |||||||||||||||||| ||| ||||||| ||||||||||||||    
T  21504084 atttgcaaattcattgttgaaagagtaggtgatccaatgaattaacataagaactgatgttcaggttgtagaataa 21504009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 7484985 - 7484930
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||  |||||| ||||||||||| |||||||||||||||||||    
T  7484985 gtaggttgtagttatgagaatttgagaattaggttttgaagttgtaattggttgtt 7484930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 19921621 - 19921566
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    |||||||||| ||||||||||||||||||||||||| |||||| ||||| ||||||    
T  19921621 gtaggttgtaattatggaaatttgggaattaggttttgaagttataattagttgtt 19921566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 21300113 - 21300168
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    |||||| |||||||||| |||||| ||||||||||| |||||||||||||||||||    
T  21300113 gtaggtagtagttatgggaatttgagaattaggttttgaagttgtaattggttgtt 21300168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 265973 - 265908
Alignment:
Q  157 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    ||||||||| |||| |||||||||||| |||||||||||| ||||||| ||| ||| ||||||||||    
T  265973 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 265908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 17011663 - 17011598
Alignment:
Q  157 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    ||||||||| |||| ||||||||| ||||||||||||||| ||||||| ||| ||| ||||||||||    
T  17011663 ttgattgtt-aaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataa 17011598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 29448775 - 29448710
Alignment:
Q  157 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    ||||||||| |||| |||||||| |||||||||||||||| ||||||| ||| ||| ||||||||||    
T  29448775 ttgattgtt-aaagagtaggtaaaccaatgaattaacataagaattgaagttcaggctgtagaataa 29448710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 21405700 - 21405751
Alignment:
Q  4 ggttgtagttatggaaatttgggaa-ttaggtttagaagttgtaattggttg 54  Q
    |||||||||| ||| |||||||||| ||||| ||||||||||||||||||||    
T  21405700 ggttgtagttttgggaatttgggaaattagggttagaagttgtaattggttg 21405751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 52
Target Start/End: Original strand, 31251961 - 31252011
Alignment:
Q  2 taggttgtagttatggaaatttgggaattaggtttagaagttgtaattggt 52  Q
    |||||||||||| | | |||||| |||||||||||||||||| ||||||||    
T  31251961 taggttgtagttttaggaatttgagaattaggtttagaagttataattggt 31252011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 31622091 - 31622053
Alignment:
Q  18 aaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  31622091 aaatttgggaattaggttttgaagtcgtaattggttgtt 31622053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 20566515 - 20566482
Alignment:
Q  23 tgggaattaggtttagaagttgtaattggttgtt 56  Q
    |||||||||||||| |||||||||||||||||||    
T  20566515 tgggaattaggttttgaagttgtaattggttgtt 20566482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 21617998 - 21618047
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattg 50  Q
    ||||||||||||| ||| |||||| |||||||| |||||||||| |||||    
T  21617998 gtaggttgtagttttgggaatttgagaattagggttagaagttgaaattg 21618047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 6754 - 6989
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaatgaagtt 100  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||    
T  6754 gtaggttgtagttttggaaatttaggaattaggtttagaagttgtaattggttgttttaattgtagaattgatttttgaaattaagatgttaatgaagtt 6853  T
Q  101 agggttgtgaaaagaagttagagttttgaaaagaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||| ||||||||||||||| |||    
T  6854 agggttgtgaaaagaagttagagttttgaaaagaagttaggattttgaattgcaatttgattgttgaaagtgtatgtaattcaatgaattaacataagaa 6953  T
Q  201 ttgatgtttaggttgtagaataacaataggtgatgt 236  Q
    |||||||| ||||||||||||||||||| |||||||    
T  6954 ttgatgttcaggttgtagaataacaatatgtgatgt 6989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 189; Significance: 1e-102; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 15 - 223
Target Start/End: Complemental strand, 14274301 - 14274093
Alignment:
Q  15 tggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaatgaagttagggttgtgaaaag 114  Q
    |||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  14274301 tggaaaattgggaattaggtttagaagttgtaatttgttgttttaattgtagaattgattgttggaattaaggtgttaatgaagttagggttgtgaaaag 14274202  T
Q  115 aagttagagttttgaaaagaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggtt 214  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14274201 aagttagagttttgaaaagaagttagggttttgaattgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgttcaggtt 14274102  T
Q  215 gtagaataa 223  Q
    |||||||||    
T  14274101 gtagaataa 14274093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 47974889 - 47974999
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaatgaagtt 100  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||    
T  47974889 gtaggttgtagttttggaaatttgggaattatgtttagaagttgtaattggttgttttaattgtagagttgattgttgaaattaagatgctaatgaagtt 47974988  T
Q  101 agggttgtgaa 111  Q
    |||||| ||||    
T  47974989 agggttttgaa 47974999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 25 - 127
Target Start/End: Original strand, 708523 - 708625
Alignment:
Q  25 ggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaatgaagttagggttgtgaaaagaagttagagt 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||| |||||||||||||| ||    
T  708523 ggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttgaaattaagatgttaaagaagttagagttttgaaaagaagttagggt 708622  T
Q  125 ttt 127  Q
    |||    
T  708623 ttt 708625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 98 - 223
Target Start/End: Original strand, 12754721 - 12754847
Alignment:
Q  98 gttagggttgtgaaaagaagttagagttttgaaaagaagttaggg-ttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacata 196  Q
    |||||||||||||||||||||||||||||| |||||||||| ||| |||||| ||||||||||||||||||||| ||||||||||  |||||||||  ||    
T  12754721 gttagggttgtgaaaagaagttagagttttaaaaagaagtttgggtttttgaattgcaatttgattgttgaaagagtaggtaatctgatgaattaaagta 12754820  T
Q  197 tgaattgatgtttaggttgtagaataa 223  Q
      ||||| |||| ||||||||||||||    
T  12754821 ataattggtgttcaggttgtagaataa 12754847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 154 - 236
Target Start/End: Original strand, 42565945 - 42566027
Alignment:
Q  154 aatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtgatgt 236  Q
    ||||||||||||||||||||| |||||||||||||||||||||  |||||||||| |||||||||||||||||||||| ||||    
T  42565945 aatttgattgttgaaagtgtacgtaatccaatgaattaacatagaaattgatgttcaggttgtagaataacaataggtaatgt 42566027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 132 - 236
Target Start/End: Complemental strand, 33060398 - 33060296
Alignment:
Q  132 agaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggt 231  Q
    ||||||||||  ||||| ||||||||||||||||||||||||||| ||||||| ||||||| |||  |||||||||| |||| |||||||||||||||||    
T  33060398 agaagttagg--tttgaattgcaatttgattgttgaaagtgtaggcaatccaaagaattaatataaaaattgatgttcaggtcgtagaataacaataggt 33060301  T
Q  232 gatgt 236  Q
     ||||    
T  33060300 aatgt 33060296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 131 - 224
Target Start/End: Complemental strand, 21661217 - 21661124
Alignment:
Q  131 aagaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataac 224  Q
    |||||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||  |   | ||||||||||||||||||| ||||    
T  21661217 aagaagttagggttttgaattgcaatttgattcttgaaagtgtaagtaatccaatgaattaatgtgaaagttgatgtttaggttgtagagtaac 21661124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 20620269 - 20620214
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  20620269 gtaggttgtagttatggaaatttgggaattaggttttgaagttgtaattggttgtt 20620214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 133 - 223
Target Start/End: Original strand, 47974983 - 47975073
Alignment:
Q  133 gaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    |||||||||||||||| |||||||||||||||||||||  |||||||||| |||||||||  ||  ||||| |||| ||||||||||||||    
T  47974983 gaagttagggttttgaattgcaatttgattgttgaaagattaggtaatccgatgaattaaggtaataattggtgttcaggttgtagaataa 47975073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 12127232 - 12127287
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  12127232 gtaggttttagttatggaaatttgggaattaggttttgaagttgtaattggttgtt 12127287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 12322999 - 12323054
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||    
T  12322999 gtaggttgtagttatggaaatttgggaattaggttttgaagttgtacttggttgtt 12323054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 12465329 - 12465384
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  12465329 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 12465384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 13147541 - 13147596
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  13147541 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 13147596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 15095706 - 15095773
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaa 68  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||| |||| |||||| ||||||    
T  15095706 gtaggttgtagttttgggaatttgggaattaggtttagaagttgtaattagttgatttaatagtagaa 15095773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 15140196 - 15140129
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaa 68  Q
    ||||||||||||| ||| ||||||||||||||||||| |||||||||||||||| |||||| ||||||    
T  15140196 gtaggttgtagttttgggaatttgggaattaggtttaaaagttgtaattggttgatttaatagtagaa 15140129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 13698709 - 13698761
Alignment:
Q  2 taggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttg 54  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  13698709 taggttgtagttttggaaatttgggaattagggttagaagttgtaattggttg 13698761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 14180467 - 14180522
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||    
T  14180467 gtaggttgtagttatgggaatttgggaattatgttttgaagttgtaattggttgtt 14180522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 20214130 - 20214075
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||    
T  20214130 gtaggttgtagttatgggaatttgggaattaagttttgaagttgtaattggttgtt 20214075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 46386157 - 46386212
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||    
T  46386157 gtaggttgtagttatgggaatttgagaattaggttttgaagttgtaattggttgtt 46386212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 12372255 - 12372202
Alignment:
Q  3 aggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||| |||||| ||||||||||| |||||||||||||||||||    
T  12372255 aggttgtagttatgggaatttgagaattaggttttgaagttgtaattggttgtt 12372202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 8135306 - 8135366
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaat 61  Q
    ||||||||||||| | | |||||| ||||||||||||||||||||||||||||| ||||||    
T  8135306 gtaggttgtagttttaggaatttgagaattaggtttagaagttgtaattggttgatttaat 8135366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 33002141 - 33002078
Alignment:
Q  3 aggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtaga 67  Q
    ||||||||||| ||| ||||||||||||||| |||||||||||||||||||||| |||| |||||    
T  33002141 aggttgtagtt-tgggaatttgggaattagggttagaagttgtaattggttgttgtaatagtaga 33002078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 8851228 - 8851283
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||  ||||||| |||||||||| |||||||||||||||||||    
T  8851228 gtaggttgtagttatgagaatttggaaattaggttttgaagttgtaattggttgtt 8851283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 10277310 - 10277255
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||  |||||| ||||||||||| |||||||||||||||||||    
T  10277310 gtaggttgtagttatgagaatttgagaattaggttttgaagttgtaattggttgtt 10277255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 11067451 - 11067396
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| || || |||||||||||||    
T  11067451 gtaggttgtagttatgggaatttgggaattaggttttgatgtagtaattggttgtt 11067396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 13132390 - 13132449
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaa 60  Q
    |||||| |||||| ||| |||||||||||||||||||||||||||||| ||||| |||||    
T  13132390 gtaggtcgtagttttgggaatttgggaattaggtttagaagttgtaatcggttgatttaa 13132449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 32433658 - 32433713
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||  |||||| ||||||||||| |||||||||||||||||||    
T  32433658 gtaggttgtagttatgtgaatttgtgaattaggttttgaagttgtaattggttgtt 32433713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 35771511 - 35771554
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttg 44  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  35771511 gtaggttgtagttttggaaatttgggaattaggtttagaagttg 35771554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 223
Target Start/End: Original strand, 32160317 - 32160382
Alignment:
Q  157 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    ||||||||| |||| ||||||||||||||||||||||||| ||||||| ||| ||| ||||||||||    
T  32160317 ttgattgtt-aaagagtaggtaatccaatgaattaacataagaattgaagttcaggctgtagaataa 32160382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 153 - 189
Target Start/End: Complemental strand, 37539388 - 37539352
Alignment:
Q  153 caatttgattgttgaaagtgtaggtaatccaatgaat 189  Q
    |||||||||||||||||||||||||||||||||||||    
T  37539388 caatttgattgttgaaagtgtaggtaatccaatgaat 37539352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 12557904 - 12557853
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggt 52  Q
    ||||||||||||| ||| ||||||| |||||||||||||||||| |||||||    
T  12557904 gtaggttgtagttttgggaatttggaaattaggtttagaagttgaaattggt 12557853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 223
Target Start/End: Original strand, 16550119 - 16550184
Alignment:
Q  157 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    ||||||||| |||| ||||||||| ||||||||||||||| ||||||| ||| ||| ||||||||||    
T  16550119 ttgattgtt-aaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataa 16550184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 16615543 - 16615478
Alignment:
Q  157 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    ||||||||| |||| ||||||||| ||||||||||||||| ||||||| ||| ||| ||||||||||    
T  16615543 ttgattgtt-aaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataa 16615478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 52
Target Start/End: Complemental strand, 41285013 - 41284963
Alignment:
Q  2 taggttgtagttatggaaatttgggaattaggtttagaagttgtaattggt 52  Q
    |||||||||||| | | ||||||||||||||||||||||||| ||||||||    
T  41285013 taggttgtagttttaggaatttgggaattaggtttagaagttataattggt 41284963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 67
Target Start/End: Original strand, 17070384 - 17070425
Alignment:
Q  26 gaattaggtttagaagttgtaattggttgttttaattgtaga 67  Q
    ||||||||||||||||||||||||||||| ||||| ||||||    
T  17070384 gaattaggtttagaagttgtaattggttgatttaagtgtaga 17070425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 15624002 - 15623950
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggtt 53  Q
    |||| |||||||| ||| |||||| ||||||||||||| ||||||||||||||    
T  15624002 gtagtttgtagttttgggaatttgagaattaggtttaggagttgtaattggtt 15623950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 16999413 - 16999361
Alignment:
Q  5 gttgtagttatggaaattt-gggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||| ||||| ||||||||||||| ||||||||||| |||||||    
T  16999413 gttgtagttatgggaattttgggaattaggttttgaagttgtaatcggttgtt 16999361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 189
Target Start/End: Complemental strand, 19195144 - 19195096
Alignment:
Q  141 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaat 189  Q
    |||||||| || |||||||||| ||||||||||| ||||||||||||||    
T  19195144 ggttttgaatttcaatttgatttttgaaagtgtatgtaatccaatgaat 19195096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 48807395 - 48807454
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaa 60  Q
    |||| |||||||| ||| |||||||||||| |||  |||||||||||||||||| |||||    
T  48807395 gtagattgtagttttgggaatttgggaatttggtacagaagttgtaattggttgatttaa 48807454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 12754681 - 12754719
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttaga 39  Q
    |||||||||||| |||||||||||||||||| |||||||    
T  12754681 gtaggttgtagtaatggaaatttgggaattatgtttaga 12754719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 223
Target Start/End: Original strand, 13315197 - 13315263
Alignment:
Q  157 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    |||||||||||||| |||||||| ||||||||||||   |  ||||| |||| ||||||||||||||    
T  13315197 ttgattgttgaaagagtaggtaacccaatgaattaaggaaataattggtgttcaggttgtagaataa 13315263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 223
Target Start/End: Original strand, 708630 - 708703
Alignment:
Q  150 ttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    ||||||||||||||||||||| ||||| |||   ||| |||||  ||  ||||| |||||||||||||||||||    
T  708630 ttgcaatttgattgttgaaagagtaggcaatatgatggattaaggtaataattggtgtttaggttgtagaataa 708703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 36685214 - 36685246
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattagg 33  Q
    ||||||||||||| |||||||||||||||||||    
T  36685214 gtaggttgtagttttggaaatttgggaattagg 36685246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 153; Significance: 3e-81; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 18585788 - 18585536
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattg-----------------ttggaatt 83  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||                  ||| ||||    
T  18585788 gtaggttgtagttttggaaatttaggaattaggtttagaagttgtaattggttgttttaattgtagaattgatttaattgtagaattgatttttgaaatt 18585689  T
Q  84 aagatgttaatgaagttagggttgtgaaaagaagttagagttttgaaaagaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatcca 183  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||||| ||    
T  18585688 aagatgttaatgaagttagggttgtgaaaagaagttagagttttgaaaagaagttaggattttgaattgcaatttgattgttgaaagtgtatgtaattca 18585589  T
Q  184 atgaattaacatatgaattgatgtttaggttgtagaataacaataggtgatgt 236  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||| |||||||    
T  18585588 atgaattaacataagaattgatgttcaggttgtagaataacaatatgtgatgt 18585536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 132 - 236
Target Start/End: Complemental strand, 18982374 - 18982269
Alignment:
Q  132 agaagttagggttttgat-ttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaatagg 230  Q
    ||||||||||||||| |  ||||||||||||||||||||| ||||||||||||||||| ||| |||  ||| |||||| |||||||||||||||||| ||    
T  18982374 agaagttagggtttttaaattgcaatttgattgttgaaagcgtaggtaatccaatgaactaatataaaaatcgatgttcaggttgtagaataacaatcgg 18982275  T
Q  231 tgatgt 236  Q
    ||||||    
T  18982274 tgatgt 18982269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 130 - 224
Target Start/End: Original strand, 3006963 - 3007057
Alignment:
Q  130 aaagaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataac 224  Q
    |||||||||| |||||||| ||||||||||||| ||||||||||| |||||||||||||||||  |   | ||||||||||||||||||| ||||    
T  3006963 aaagaagttatggttttgaattgcaatttgattcttgaaagtgtaagtaatccaatgaattaatgtgaaagttgatgtttaggttgtagagtaac 3007057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 154 - 236
Target Start/End: Complemental strand, 18459245 - 18459163
Alignment:
Q  154 aatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtgatgt 236  Q
    ||||||||||||||||||||||| |||||||||||||||||||  || || |||| |||||||||||||||| ||||| ||||    
T  18459245 aatttgattgttgaaagtgtaggaaatccaatgaattaacataaaaactgttgttcaggttgtagaataacagtaggtaatgt 18459163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 7827955 - 7827900
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  7827955 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 7827900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 23150356 - 23150411
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  23150356 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 23150411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 27330050 - 27330105
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  27330050 gtaggttgtagttatggcaatttgggaattaggttttgaagttgtaattggttgtt 27330105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 27390790 - 27390845
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  27390790 gtaggttgtagttatggcaatttgggaattaggttttgaagttgtaattggttgtt 27390845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 28948541 - 28948490
Alignment:
Q  17 gaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaa 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  28948541 gaaatttgggaattaggtttagaagttgtaattggttgttttaatagtagaa 28948490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 19655300 - 19655355
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||    
T  19655300 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattagttgtt 19655355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 23501655 - 23501595
Alignment:
Q  1 gtaggttgtagttat-ggaaatttgggaattaggtttagaagttgtaattggttgttttaa 60  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||| |||| |||||    
T  23501655 gtaggttgtagtttttggaaatttgggaattaggtttagaagttgtaatttgttgatttaa 23501595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 224
Target Start/End: Complemental strand, 31166184 - 31166088
Alignment:
Q  129 aaaagaagttagggttttga-tttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataac 224  Q
    |||||||||||||||||| | |||||||||||||| || ||||||||  ||||||||||||||||  |   | ||||||||||||||||||| ||||    
T  31166184 aaaagaagttagggttttcaatttgcaatttgattctttaaagtgtaactaatccaatgaattaatgtgaaagttgatgtttaggttgtagagtaac 31166088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 189
Target Start/End: Complemental strand, 35057496 - 35057448
Alignment:
Q  141 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaat 189  Q
    |||||||| || |||||||||||||||||||||||||||||||||||||    
T  35057496 ggttttgaatttcaatttgattgttgaaagtgtaggtaatccaatgaat 35057448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 15890781 - 15890836
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||| ||  |||||||||||||||||| |||||||||||||||||||    
T  15890781 gtaggttgtagttttgttaatttgggaattaggttttgaagttgtaattggttgtt 15890836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 27125546 - 27125601
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| ||||||||| |||||||| |||||||||||| ||||||    
T  27125546 gtaggttgtagttatgggaatttgggacttaggttttgaagttgtaattagttgtt 27125601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 19401077 - 19401012
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtag 66  Q
    ||||||||||||| ||| |||||| |||||||||||| |||||||||||| ||| |||||| ||||    
T  19401077 gtaggttgtagttttgggaatttgagaattaggtttataagttgtaattgtttgatttaatagtag 19401012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 18703551 - 18703503
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaatt 49  Q
    ||||||||||||||||| |||||||||||||| ||| ||||||||||||    
T  18703551 gtaggttgtagttatgggaatttgggaattagattttgaagttgtaatt 18703503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 18709486 - 18709438
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaatt 49  Q
    ||||||||||||||||| |||||||||||||| ||| ||||||||||||    
T  18709486 gtaggttgtagttatgggaatttgggaattagattttgaagttgtaatt 18709438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 154 - 230
Target Start/End: Original strand, 24506228 - 24506304
Alignment:
Q  154 aatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaatagg 230  Q
    ||||| ||||||||||||||||||||||||||||||||  |||  ||||||||||   ||| |||||||| ||||||    
T  24506228 aatttaattgttgaaagtgtaggtaatccaatgaattagtataaaaattgatgttcttgttttagaataataatagg 24506304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 185
Target Start/End: Complemental strand, 13285699 - 13285656
Alignment:
Q  142 gttttgatttgcaatttgattgttgaaagtgtaggtaatccaat 185  Q
    ||||||| || |||||||||||||||||||||||||||||||||    
T  13285699 gttttgaatttcaatttgattgttgaaagtgtaggtaatccaat 13285656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 29045200 - 29045134
Alignment:
Q  157 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    |||||||||||||| ||||||||||| ||||| |||  ||  |||||||||| ||||||||||||||    
T  29045200 ttgattgttgaaagagtaggtaatccgatgaactaaggtaataattgatgttcaggttgtagaataa 29045134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 18928663 - 18928614
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattg 50  Q
    |||||||| |||| ||| ||||||| ||||||||||||||||||||||||    
T  18928663 gtaggttgaagttttgggaatttggaaattaggtttagaagttgtaattg 18928614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 223
Target Start/End: Original strand, 15891686 - 15891751
Alignment:
Q  157 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    ||||||||| |||| ||||||||| ||||||||||||||| ||||||| ||| ||| |||| |||||    
T  15891686 ttgattgtt-aaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtaaaataa 15891751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 223
Target Start/End: Original strand, 15900771 - 15900836
Alignment:
Q  157 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    ||||||||| |||| ||||||||| ||||||||||||||| ||||||| ||| ||| |||| |||||    
T  15900771 ttgattgtt-aaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtaaaataa 15900836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 136; Significance: 5e-71; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 14549743 - 14549520
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaatgaagtt 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||  ||||| |||||||||||||||    
T  14549743 gtaggttgtagttttggaaatttgggaattaggtttagaagttgtaattaggtgttttaattgtagaattgattgttaaaattaggatgttaatgaagtt 14549644  T
Q  101 agggttgtgaaaagaagttagagttttgaaaagaagttaggg-ttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatga 199  Q
    |||||||||||||||||||||| |||| |||| ||||||||| |||||| ||||||||||||||||||||| ||| ||||||  |||||||||  ||  |    
T  14549643 agggttgtgaaaagaagttagatttttaaaaacaagttagggtttttgaattgcaatttgattgttgaaagagtatgtaatctgatgaattaaggtaata 14549544  T
Q  200 attgatgtttaggttgtagaataa 223  Q
    |||| |||| ||||||||||||||    
T  14549543 attggtgttcaggttgtagaataa 14549520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 19434628 - 19434841
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaatgaagtt 100  Q
    ||||||||||||| | ||||||||||||||| |||||||||||||          ||||| ||||||||||||||||| |||||||||||||||||||||    
T  19434628 gtaggttgtagtttttgaaatttgggaattaagtttagaagttgt----------tttaaatgtagaattgattgttgaaattaagatgttaatgaagtt 19434717  T
Q  101 agggttgtgaaaagaagttagagttttgaaaagaagttaggg-ttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatga 199  Q
    |||| |||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||| ||||||||||  |||||||||   |  |    
T  19434718 agggctgtgaaaagaagttagagttttaaaaagaagttagggtttttgaattgcaatttgattgttgaaagagtaggtaatctgatgaattaaagaaata 19434817  T
Q  200 attgatgtttaggttgtagaataa 223  Q
    |||| |||| ||||||||||||||    
T  19434818 attggtgttcaggttgtagaataa 19434841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 154 - 228
Target Start/End: Complemental strand, 14477571 - 14477497
Alignment:
Q  154 aatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaata 228  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||| || ||||||||||||||||    
T  14477571 aatttgattgttgaaagtgtaggtaatccaatgaattaacatagaaattgatgttcagattgtagaataacaata 14477497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 153 - 236
Target Start/End: Complemental strand, 18462963 - 18462880
Alignment:
Q  153 caatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtgatgt 236  Q
    |||||||||||||||||||||||||||||||||||||||||||   |||||||||| || |||||||| |||||||||| ||||    
T  18462963 caatttgattgttgaaagtgtaggtaatccaatgaattaacatgaaaattgatgttcagattgtagaacaacaataggtaatgt 18462880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 236
Target Start/End: Complemental strand, 13165072 - 13164990
Alignment:
Q  154 aatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtgatgt 236  Q
    ||||||||||||||||||||||| ||||||||||||||||||   |||||||||  |||||||||||||||||||||| ||||    
T  13165072 aatttgattgttgaaagtgtaggaaatccaatgaattaacatgaaaattgatgtccaggttgtagaataacaataggtaatgt 13164990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 105 - 219
Target Start/End: Original strand, 45314202 - 45314315
Alignment:
Q  105 ttgtgaaaagaagttagagttttgaaaagaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattga 204  Q
    ||||||||||||||||| |||||||||||||||| |||||| || ||||||||||||| ||||||||||| ||||| | |||||||||  |   | ||||    
T  45314202 ttgtgaaaagaagttagggttttgaaaagaagtttgggttt-gaattgcaatttgattcttgaaagtgtaagtaattcgatgaattaatgtgaaagttga 45314300  T
Q  205 tgtttaggttgtaga 219  Q
    |||||||||||||||    
T  45314301 tgtttaggttgtaga 45314315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 14353888 - 14353977
Alignment:
Q  130 aaagaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtaga 219  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||| ||||||| |||||||||  |   | |||||||||||||||||||    
T  14353888 aaagaagttagggttttgaattgcaatttgattcttgaaagtgtaagtaatccgatgaattaatgtgaaagttgatgtttaggttgtaga 14353977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 16998508 - 16998453
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  16998508 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 16998453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 25091636 - 25091581
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  25091636 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 25091581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 53630543 - 53630598
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  53630543 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 53630598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 10356505 - 10356556
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggt 52  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  10356505 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggt 10356556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 11425926 - 11425871
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||    
T  11425926 gtaggttgtagttatgggaatttgggaattaggttttgaaattgtaattggttgtt 11425871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 37019653 - 37019598
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||    
T  37019653 gtaggttgtagttatgggaatttgagaattaggttttgaagttgtaattggttgtt 37019598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 6633606 - 6633661
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||  |||||| ||||||||||| |||||||||||||||||||    
T  6633606 gtaggttgtagttatgagaatttgagaattaggttttgaagttgtaattggttgtt 6633661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 15115205 - 15115150
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||  ||| |||||||||||||||||||    
T  15115205 gtaggttgtagttatgggaatttgggaattattttttgaagttgtaattggttgtt 15115150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 42875780 - 42875725
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||| ||||||| ||||||||||||| |||||    
T  42875780 gtaggttgtagttatgggaatttgggaaataggttttgaagttgtaattgattgtt 42875725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 46001600 - 46001655
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||  |||||| ||||||||||| |||||||||||||||||||    
T  46001600 gtaggttgtagttatgagaatttgagaattaggttttgaagttgtaattggttgtt 46001655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 223
Target Start/End: Original strand, 10694362 - 10694427
Alignment:
Q  157 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    ||||||||| |||| ||||||||||||||||||||||||| ||||||| ||| ||| ||||||||||    
T  10694362 ttgattgtt-aaagagtaggtaatccaatgaattaacataagaattgaagttcaggctgtagaataa 10694427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 60
Target Start/End: Complemental strand, 9638972 - 9638933
Alignment:
Q  21 tttgggaattaggtttagaagttgtaattggttgttttaa 60  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  9638972 tttgggaattaggtttagaagttgtaattggttgatttaa 9638933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 9924136 - 9924085
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggt 52  Q
    |||||||| |||| ||| ||||||| ||||||||||||||||||||||||||    
T  9924136 gtaggttgaagttttgggaatttggaaattaggtttagaagttgtaattggt 9924085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 19610307 - 19610252
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||| |||||| |||| || ||||||||||||||||    
T  19610307 gtaggttgtagttatgggaatttgagaattaagttttgacgttgtaattggttgtt 19610252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 9870514 - 9870568
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaa-ttaggtttagaagttgtaattggttg 54  Q
    ||||||||||||| ||| |||||||||| ||||| ||||||||||||||||||||    
T  9870514 gtaggttgtagttttgggaatttgggaaattagggttagaagttgtaattggttg 9870568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 198 - 236
Target Start/End: Original strand, 13043925 - 13043963
Alignment:
Q  198 gaattgatgtttaggttgtagaataacaataggtgatgt 236  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  13043925 gaattgatgttcaggttgtagaataacaataggtgatgt 13043963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 9622423 - 9622357
Alignment:
Q  157 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    |||||||||||||| |||||||||||| ||||||||| || | | ||| ||| || |||||||||||    
T  9622423 ttgattgttgaaagagtaggtaatccattgaattaacgtaaggaatgaggttcagattgtagaataa 9622357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 16296807 - 16296741
Alignment:
Q  157 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    |||||||||||||| ||||||||||| |||||||||  ||  ||||| |||| ||||||| ||||||    
T  16296807 ttgattgttgaaagagtaggtaatccgatgaattaaggtaataattggtgttcaggttgttgaataa 16296741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 26921707 - 26921745
Alignment:
Q  18 aaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  26921707 aaatttgggaattaggttttgaagtcgtaattggttgtt 26921745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 7 - 180
Target Start/End: Original strand, 106126 - 106300
Alignment:
Q  7 tgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaatgaagttagggtt 106  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  106126 tgtagttttggaaatttgggaattaggtttagacgttgtaattggttgttttaattgtagaattgattgttgaaattaagatgttaacgaagttagggtt 106225  T
Q  107 gtgaaaagaagttagagttttgaaaagaagttaggg-ttttgatttgcaatttgattgttgaaagtgtaggtaat 180  Q
    ||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||| | |||||||    
T  106226 gtgaaaagaagttagagttttaaaaagaagttagggtttttgaattgcaatttgattgttgaaagagaaggtaat 106300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 22 - 141
Target Start/End: Complemental strand, 199 - 80
Alignment:
Q  22 ttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaatgaagttagggttgtgaaaagaagttag 121  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  199 ttggaaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaatgaagttaaggttgtgaaaagaagttag 100  T
Q  122 agttttgaaaagaagttagg 141  Q
    ||||||||||||||||||||    
T  99 agttttgaaaagaagttagg 80  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 102; Significance: 9e-51; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 95 - 236
Target Start/End: Complemental strand, 22345121 - 22344980
Alignment:
Q  95 gaagttagggttgtgaaaagaagttagagttttgaaaagaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaaca 194  Q
    |||||||||||| |||||||||||||| ||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |    
T  22345121 gaagttagggttttgaaaagaagttagggttgtgaaaagaagttatggttttgaattgcaatttgattgttgaaagtgtaggtaatccaatgaattaata 22345022  T
Q  195 tatgaattgatgtttaggttgtagaataacaataggtgatgt 236  Q
    ||  ||| |||||| |||||||||||||||||||||||||||    
T  22345021 taaaaatcgatgttcaggttgtagaataacaataggtgatgt 22344980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 95 - 236
Target Start/End: Complemental strand, 22356781 - 22356640
Alignment:
Q  95 gaagttagggttgtgaaaagaagttagagttttgaaaagaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaaca 194  Q
    |||||||||||| |||||||||||||| ||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| |    
T  22356781 gaagttagggttttgaaaagaagttagggttgtgaaaagaagttatggttttgaattgcaatttgattgttgaaagtgtaggtaatccaatgaattaata 22356682  T
Q  195 tatgaattgatgtttaggttgtagaataacaataggtgatgt 236  Q
    ||  ||| |||||| |||||||||||||||||||||||||||    
T  22356681 taaaaatcgatgttcaggttgtagaataacaataggtgatgt 22356640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 111 - 236
Target Start/End: Original strand, 20517126 - 20517251
Alignment:
Q  111 aaagaagttagagttttgaaaagaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgttta 210  Q
    ||||||||||| ||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||  ||| |||||| |    
T  20517126 aaagaagttagggttgtgaaaagaagttggggttttgaattgcaatttgattgttgaaagtgtaggtaatccaatgaattaatataaaaatcgatgttca 20517225  T
Q  211 ggttgtagaataacaataggtgatgt 236  Q
    ||||||||||||||||||||||||||    
T  20517226 ggttgtagaataacaataggtgatgt 20517251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 150 - 236
Target Start/End: Complemental strand, 20879416 - 20879330
Alignment:
Q  150 ttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtgatgt 236  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||    
T  20879416 ttgcaaattgattgttaaaagtgtaggtaatccaatgaattaacataagaattgatgttcaggttgtagaataacaataggtaatgt 20879330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 42265647 - 42265748
Alignment:
Q  132 agaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggt 231  Q
    ||||||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||| |||  |||||||||| |||||||||| ||| |||| ||    
T  42265647 agaagttagggttttgaattgcaatttgattgttgaaggtgtatgtaatccaatgaattaatataaaaattgatgttcaggttgtagagtaataataagt 42265746  T
Q  232 ga 233  Q
    ||    
T  42265747 ga 42265748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 36305811 - 36305743
Alignment:
Q  124 ttttgaaaagaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaa 192  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||| |||||||||    
T  36305811 ttttgaaaagaagttagggttttgaattgcaatttgattcttgaaagtgtaagtaatccgatgaattaa 36305743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 5082281 - 5082336
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  5082281 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 5082336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 19140748 - 19140693
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  19140748 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 19140693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 22532201 - 22532268
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaa 68  Q
    ||||||||||||| |||||| |||||||||||||||| |||||||||||| |||||||||| ||||||    
T  22532201 gtaggttgtagttttggaaaattgggaattaggtttaaaagttgtaattgattgttttaatagtagaa 22532268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 22536886 - 22536953
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaa 68  Q
    ||||||||||||| |||||| |||||||||||||||| |||||||||||| |||||||||| ||||||    
T  22536886 gtaggttgtagttttggaaaattgggaattaggtttaaaagttgtaattgattgttttaatagtagaa 22536953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 163 - 229
Target Start/End: Original strand, 21676713 - 21676779
Alignment:
Q  163 gttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaatag 229  Q
    |||||||| ||||||||||||||||||||| |||  |||||||||| ||||||||||||||||||||    
T  21676713 gttgaaagagtaggtaatccaatgaattaatataaaaattgatgttcaggttgtagaataacaatag 21676779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 22317981 - 22318049
Alignment:
Q  2 taggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaatt 70  Q
    ||||||||||||  || ||||||||| |||||||||||||||||||||||||| |||||| ||||||||    
T  22317981 taggttgtagtttcgggaatttgggatttaggtttagaagttgtaattggttggtttaatagtagaatt 22318049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 5761517 - 5761462
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||    
T  5761517 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattagttgtt 5761462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 6573125 - 6573180
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||    
T  6573125 gtaggttgtagttatgggaatttgggaatgaggttttgaagttgtaattggttgtt 6573180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 20083707 - 20083762
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||  |||||||||||||||||| |||||||||||||||||||    
T  20083707 gtaggttgtagttatgagaatttgggaattaggttttgaagttgtaattggttgtt 20083762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 223
Target Start/End: Complemental strand, 22483713 - 22483650
Alignment:
Q  160 attgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    ||||||||||| ||||||||||  ||||||||||||| ||||||||||| ||||||||||||||    
T  22483713 attgttgaaagagtaggtaatctgatgaattaacataagaattgatgttcaggttgtagaataa 22483650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 192
Target Start/End: Original strand, 22708414 - 22708476
Alignment:
Q  130 aaagaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaa 192  Q
    ||||||||||||||||| | ||||||||||||| ||||||||||| ||||| |||||||||||    
T  22708414 aaagaagttagggttttaaattgcaatttgattcttgaaagtgtaagtaatacaatgaattaa 22708476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 6101822 - 6101877
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| ||||||||||| |||||| |||||| ||||||||||||    
T  6101822 gtaggttgtagttatgggaatttgggaatcaggttttgaagttataattggttgtt 6101877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 6202759 - 6202704
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||  |||||| ||||||||||| |||||||||||||||||||    
T  6202759 gtaggttgtagttatgagaatttgagaattaggttttgaagttgtaattggttgtt 6202704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 31722563 - 31722622
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaa 60  Q
    ||||||||||||| ||| ||||||| |||| ||||||||||||||||||||||| |||||    
T  31722563 gtaggttgtagttttgggaatttggaaatttggtttagaagttgtaattggttgatttaa 31722622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 37292688 - 37292633
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||  |||||| ||||||||||| |||||||||||||||||||    
T  37292688 gtaggttgtagttatgagaatttgagaattaggttttgaagttgtaattggttgtt 37292633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 39936079 - 39936134
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||| ||||||||||| |||||||||||| ||||||    
T  39936079 gtaggttgtagttatgggaatttgcgaattaggttttgaagttgtaattagttgtt 39936134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 42817976 - 42818031
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| ||||||| |||||| ||| |||||||||||||||||||    
T  42817976 gtaggttgtagttatgggaatttggaaattagattttgaagttgtaattggttgtt 42818031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 45469289 - 45469348
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaa 60  Q
    ||||||| ||||| || |||||||||||||| |||||||||||||||||||||| |||||    
T  45469289 gtaggttatagttttgtaaatttgggaattatgtttagaagttgtaattggttgatttaa 45469348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 223
Target Start/End: Original strand, 25657631 - 25657696
Alignment:
Q  157 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    ||||||||| |||| ||||||||| ||||||||||||||| ||||||||||| ||| ||||||||||    
T  25657631 ttgattgtt-aaagagtaggtaattcaatgaattaacataagaattgatgttcaggctgtagaataa 25657696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 20178598 - 20178654
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgt-aattggttgtt 56  Q
    ||||||||||||||||  |||||||||||||||||| |||||||| |||||||||||    
T  20178598 gtaggttgtagttatgagaatttgggaattaggttttgaagttgtaaattggttgtt 20178654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 20022122 - 20022161
Alignment:
Q  21 tttgggaattaggtttagaagttgtaattggttgttttaa 60  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  20022122 tttgggaattaggtttagaagttgtaattggttgatttaa 20022161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 16198771 - 16198706
Alignment:
Q  157 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    ||||||||| |||| ||||||||| ||||||||||||||| ||||||| ||| ||| ||||||||||    
T  16198771 ttgattgtt-aaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataa 16198706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 39694346 - 39694400
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgt 55  Q
    ||||||||||||| ||| ||||||||||||||| ||||| ||||||||| |||||    
T  39694346 gtaggttgtagttttgggaatttgggaattagggttagacgttgtaattagttgt 39694400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 223
Target Start/End: Complemental strand, 23479016 - 23478952
Alignment:
Q  158 tgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    |||||||| |||| ||||||||| ||||||||||||||| ||||||| ||| ||| ||||||||||    
T  23479016 tgattgtt-aaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataa 23478952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 42265578 - 42265631
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttg 54  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||| || ||||||    
T  42265578 gtaggttgtagttttgggaatttgggaattagggttagaagttgcaaatggttg 42265631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 19880758 - 19880693
Alignment:
Q  157 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    ||||||||| |||| |||||||||  |||||||||||||| ||||||| ||| ||| ||||||||||    
T  19880758 ttgattgtt-aaagagtaggtaattaaatgaattaacataagaattgaagttcaggctgtagaataa 19880693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 223
Target Start/End: Original strand, 22610382 - 22610448
Alignment:
Q  157 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    |||||||||||||| |||||||||||| ||||||||| || | | ||| ||| || |||||||||||    
T  22610382 ttgattgttgaaagagtaggtaatccattgaattaacgtaaggaatgaggttcagattgtagaataa 22610448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 26454641 - 26454576
Alignment:
Q  157 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    ||||||||| |||| ||||||||| ||||||||||||||| ||||| | ||| ||| ||||||||||    
T  26454641 ttgattgtt-aaagagtaggtaattcaatgaattaacataagaattaaagttcaggctgtagaataa 26454576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 119
Target Start/End: Original strand, 20517120 - 20517153
Alignment:
Q  86 gatgttaatgaagttagggttgtgaaaagaagtt 119  Q
    |||||||| |||||||||||||||||||||||||    
T  20517120 gatgttaaagaagttagggttgtgaaaagaagtt 20517153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 192
Target Start/End: Original strand, 21678947 - 21678995
Alignment:
Q  144 tttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaa 192  Q
    ||||| |||||||| ||| |||||||| ||||||||| |||||||||||    
T  21678947 tttgaattgcaattggatggttgaaagagtaggtaattcaatgaattaa 21678995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 96; Significance: 3e-47; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 80 - 223
Target Start/End: Complemental strand, 22135 - 21992
Alignment:
Q  80 aattaagatgttaatgaagttagggttgtgaaaagaagttagagttttgaaaagaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaa 179  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||||| ||||||||    
T  22135 aattaagatgtaaatgaagttagggttgtgaaaagaagttagagttttaaaatgaagttagggttttgaattgcaatttgattgttgaaagagtaggtaa 22036  T
Q  180 tccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    ||  |||||||||  || |||||| |||| ||||||||||||||    
T  22035 tctgatgaattaaggtaagaattggtgttcaggttgtagaataa 21992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 80 - 192
Target Start/End: Complemental strand, 10038 - 9926
Alignment:
Q  80 aattaagatgttaatgaagttagggttgtgaaaagaagttagagttttgaaaagaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaa 179  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  10038 aattaacatgttaatgaagttaggcttgtgaaaagaagttagagttttaaaaagaagttagggttttgaattgcaatttgattgttgaaagagtaggtaa 9939  T
Q  180 tccaatgaattaa 192  Q
    ||  |||||||||    
T  9938 tctgatgaattaa 9926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 146706 - 146651
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||| ||||||||||||    
T  146706 gtaggttgtagttatgggaatttgggaattaggttttgaagttataattggttgtt 146651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 16587 - 16485
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaatgaagtt 100  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  16587 gtaggttgtagttttggaaatttggcaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttgaaattaagatgttaatgaagtt 16488  T
Q  101 agg 103  Q
    |||    
T  16487 agg 16485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 87; Significance: 8e-42; HSPs: 3)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 21594 - 21484
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaattgattgttggaattaagatgttaatgaagtt 100  Q
    |||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  21594 gtagcttgtagttttggaaatttgggaattatgtttagaagttgtaattggttgttttaattgtagaattgattgtttaaattaagatgttaatgaagtt 21495  T
Q  101 agggttgtgaa 111  Q
    |||||| ||||    
T  21494 agggttttgaa 21484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 223
Target Start/End: Complemental strand, 21500 - 21410
Alignment:
Q  133 gaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    |||||||||||||||| ||||||||| ||||||||||| ||||||||||  |||||||||  ||  ||||| |||| ||||||||||||||    
T  21500 gaagttagggttttgaattgcaatttcattgttgaaagagtaggtaatctgatgaattaaggtaataattggtgttcaggttgtagaataa 21410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 29642 - 29696
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgt 55  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  29642 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgt 29696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 8e-42; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 114 - 236
Target Start/End: Original strand, 13522422 - 13522543
Alignment:
Q  114 gaagttagagttttgaaaagaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggt 213  Q
    ||||||||||||||||||||||||||||||||||| || ||| ||||| ||| |||| ||||||||||||||||||||||||| ||||||||||| ||||    
T  13522422 gaagttagagttttgaaaagaagttagggttttgaatttcaaattgatcgtt-aaagagtaggtaatccaatgaattaacataagaattgatgttcaggt 13522520  T
Q  214 tgtagaataacaataggtgatgt 236  Q
    |||||||||||||||||||||||    
T  13522521 tgtagaataacaataggtgatgt 13522543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 48631268 - 48631189
Alignment:
Q  157 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtgatgt 236  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||    
T  48631268 ttgattgttgaaagtgtaggtaattcaatgaattaacataagaattgatgttcaggttgtagaataacaataggtaatgt 48631189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 114 - 223
Target Start/End: Original strand, 6805000 - 6805109
Alignment:
Q  114 gaagttagagttttgaaaagaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggt 213  Q
    |||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||  |||||||||  ||  ||||| |||| ||||    
T  6805000 gaagttagggttgtgaaaagaagttagggttttgaattgcaatttgattgttgaaagagtaggtaatctgatgaattaaggtaataattggtgttcaggt 6805099  T
Q  214 tgtagaataa 223  Q
    ||||||||||    
T  6805100 tgtagaataa 6805109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 150 - 229
Target Start/End: Original strand, 3160735 - 3160814
Alignment:
Q  150 ttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaatag 229  Q
    ||||||||||||||||||||| ||||||||| ||||||||||| |||  |||||||||||||||||||||||||||||||    
T  3160735 ttgcaatttgattgttgaaagagtaggtaattcaatgaattaatataaaaattgatgtttaggttgtagaataacaatag 3160814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 115 - 193
Target Start/End: Original strand, 24177843 - 24177921
Alignment:
Q  115 aagttagagttttgaaaagaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaac 193  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||| || ||| |||||||||    
T  24177843 aagttagagttttaaaaagaagttagggttttgaattgcaatttgattgttgaaagagtaggcaaaccattgaattaac 24177921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 12155143 - 12155222
Alignment:
Q  157 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtgatgt 236  Q
    ||||||||||||||||||||||| |||||||||||||||   |||||||||| ||||||||||||||| |||||| ||||    
T  12155143 ttgattgttgaaagtgtaggtaacccaatgaattaacatgaaaattgatgttgaggttgtagaataactataggtaatgt 12155222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 132 - 236
Target Start/End: Original strand, 12151040 - 12151142
Alignment:
Q  132 agaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggt 231  Q
    |||||||||||||   |||| ||| ||||||||||||||||||||||| |||||||||||||||   |||||||| ||| ||| ||||||||||||||||    
T  12151040 agaagttagggtta--attttcaaattgattgttgaaagtgtaggtaacccaatgaattaacatgaaaattgatgcttatgttttagaataacaataggt 12151137  T
Q  232 gatgt 236  Q
     ||||    
T  12151138 tatgt 12151142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 9510985 - 9511052
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaa 68  Q
    |||| |||||||| ||| |||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  9510985 gtagattgtagttttgggaatttgagaattaggtttagaagttgtaattggttgttttaatagtagaa 9511052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 9518960 - 9519027
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaa 68  Q
    |||| |||||||| ||| |||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  9518960 gtagattgtagttttgggaatttgagaattaggtttagaagttgtaattggttgttttaatagtagaa 9519027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 10563691 - 10563636
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  10563691 gtagtttgtagttatggaaatttgggaattaggttttgaagttgtaattggttgtt 10563636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 17044949 - 17044894
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  17044949 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 17044894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 17518942 - 17518997
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  17518942 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 17518997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 17533804 - 17533859
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  17533804 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 17533859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 40807979 - 40807924
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  40807979 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 40807924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 49900713 - 49900658
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  49900713 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 49900658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 50348095 - 50348150
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  50348095 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 50348150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 80 - 130
Target Start/End: Original strand, 6804985 - 6805035
Alignment:
Q  80 aattaagatgttaatgaagttagggttgtgaaaagaagttagagttttgaa 130  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6804985 aattaagatgttaatgaagttagggttgtgaaaagaagttagggttttgaa 6805035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 223
Target Start/End: Original strand, 45803453 - 45803519
Alignment:
Q  157 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    |||||||||||||| ||||||||||| ||||||||||||| ||||||||||  ||||||||||||||    
T  45803453 ttgattgttgaaagagtaggtaatccgatgaattaacataagaattgatgtccaggttgtagaataa 45803519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 13522391 - 13522448
Alignment:
Q  64 tagaattgattgttggaattaagatgttaatgaagttagggttgtgaaaagaagttag 121  Q
    ||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||    
T  13522391 tagaattgattgttgaaattaagatgttaatgaagttagagttttgaaaagaagttag 13522448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 35064610 - 35064658
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaatt 49  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  35064610 gtaggttgtagttatggaaatttgggaattaggttttgaagttgtaatt 35064658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 22306652 - 22306707
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||    
T  22306652 gtaggttgtagttatgggaatttgtgaattaggttttgaagttgtaattggttgtt 22306707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 40812816 - 40812761
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||    
T  40812816 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattgattgtt 40812761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 41172440 - 41172495
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||| ||||||||||||| |||||||||||||||||||    
T  41172440 gtaggttgtagttatgggaattagggaattaggttttgaagttgtaattggttgtt 41172495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 192
Target Start/End: Complemental strand, 6003147 - 6003085
Alignment:
Q  130 aaagaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaa 192  Q
    |||||| |||||||||||| || |||||||||| ||||||||||| |||||||||||||||||    
T  6003147 aaagaaattagggttttgaattacaatttgattcttgaaagtgtaagtaatccaatgaattaa 6003085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 19568277 - 19568343
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtaga 67  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||||||||| ||| |||| |||||    
T  19568277 gtaggttgtagttttgggaatttgggaattagggttagaagttgtaattggtagttgtaatagtaga 19568343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 11563707 - 11563654
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttg 54  Q
    ||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||    
T  11563707 gtaggttgtagttttgggaatttgggaattaggtttaaaagttgtaattggttg 11563654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 10311510 - 10311455
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||  |||||| ||||||||||| |||||||||||||||||||    
T  10311510 gtaggttgtagttatgagaatttgagaattaggttttgaagttgtaattggttgtt 10311455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 13185877 - 13185834
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttg 44  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  13185877 gtaggttgtagttttggaaatttgggaattaggtttagaagttg 13185834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 17539089 - 17539034
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| ||||||| |||||||||| |||| ||||||||||||||    
T  17539089 gtaggttgtagttatgggaatttggaaattaggttttgaagatgtaattggttgtt 17539034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 35960998 - 35961049
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggt 52  Q
    |||||||| |||| ||||||||||| ||||||||||||||||||||||||||    
T  35960998 gtaggttgaagttttggaaatttggaaattaggtttagaagttgtaattggt 35961049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 44274401 - 44274346
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||  ||| |||||||||||||||||||    
T  44274401 gtaggttgtagttatgggaatttgggaattatattttgaagttgtaattggttgtt 44274346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 17694050 - 17694001
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattg 50  Q
    |||||||||||||||||||||||| ||||||| ||| |||||||||||||    
T  17694050 gtaggttgtagttatggaaatttgtgaattagattttgaagttgtaattg 17694001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 42324041 - 42324094
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttg 54  Q
    ||||||||||||| ||| ||||||| ||||||| ||||||||||||||||||||    
T  42324041 gtaggttgtagttttgggaatttggaaattagggttagaagttgtaattggttg 42324094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 49968928 - 49968993
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtag 66  Q
    |||| |||||||| ||  ||||||||||||||||||| |||||||||||||||| |||||| ||||    
T  49968928 gtagcttgtagttttgagaatttgggaattaggtttataagttgtaattggttgatttaatagtag 49968993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 35354582 - 35354530
Alignment:
Q  4 ggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    |||||||||||||| ||||||| |||||||||| ||||||||||||| |||||    
T  35354582 ggttgtagttatgggaatttggaaattaggttttgaagttgtaattgattgtt 35354530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 11259414 - 11259359
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    |||| |||||||||||  |||||||||||||||||| ||||||||||||| |||||    
T  11259414 gtagattgtagttatgagaatttgggaattaggttttgaagttgtaattgattgtt 11259359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 14508830 - 14508775
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattagg-tttagaagttgtaattggttgt 55  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||||||||||||    
T  14508830 gtaggttgtagttatgggaattttggaattaggttttggaagttgtaattggttgt 14508775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 17047109 - 17047054
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    |||||||||||||||   ||||||||||||| |||| |||||||||||||||||||    
T  17047109 gtaggttgtagttatttgaatttgggaattaagttttgaagttgtaattggttgtt 17047054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 33565069 - 33565018
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggt 52  Q
    |||||||| |||| ||| ||||||| ||||||||||||||||||||||||||    
T  33565069 gtaggttgaagttttgggaatttggaaattaggtttagaagttgtaattggt 33565018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 16979847 - 16979782
Alignment:
Q  157 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    ||||||||| |||| ||||||||| ||||||||||||||| ||||||| ||| ||| ||||||||||    
T  16979847 ttgattgtt-aaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataa 16979782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 14641638 - 14641677
Alignment:
Q  21 tttgggaattaggtttagaagttgtaattggttgttttaa 60  Q
    ||||||||||||||||||||||||||||| |||| |||||    
T  14641638 tttgggaattaggtttagaagttgtaatttgttgatttaa 14641677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 15931577 - 15931624
Alignment:
Q  2 taggttgtagttatggaaatttgggaattaggtttagaagttgtaatt 49  Q
    |||||||||||||||  ||||| |||||||||||| ||||||||||||    
T  15931577 taggttgtagttatgagaattttggaattaggtttcgaagttgtaatt 15931624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 22652708 - 22652643
Alignment:
Q  157 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    ||||||||| |||| |||||||||| | |||||||||||| ||||||| ||| ||| ||||||||||    
T  22652708 ttgattgtt-aaagagtaggtaatctagtgaattaacataagaattgaagttcaggctgtagaataa 22652643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 24177805 - 24177847
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagtt 43  Q
    ||||||||||||| ||||||||||||||||| ||||| |||||    
T  24177805 gtaggttgtagttttggaaatttgggaattatgtttaaaagtt 24177847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 37039032 - 37038978
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaa-ttaggtttagaagttgtaattggttg 54  Q
    ||||||||||||| ||| |||||||||| ||||| ||| ||||||||||||||||    
T  37039032 gtaggttgtagttttgggaatttgggaaattagggttaaaagttgtaattggttg 37038978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 54
Target Start/End: Original strand, 22146832 - 22146880
Alignment:
Q  7 tgtagttatggaaatttgggaa-ttaggtttagaagttgtaattggttg 54  Q
    ||||||| ||| |||||||||| ||||| ||||||||||||||||||||    
T  22146832 tgtagttttgggaatttgggaaattagggttagaagttgtaattggttg 22146880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 75; Significance: 1e-34; HSPs: 3)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 114 - 236
Target Start/End: Complemental strand, 12219 - 12098
Alignment:
Q  114 gaagttagagttttgaaaagaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggt 213  Q
    ||||||||||||||||||||||| ||||||||||| || ||| ||||||||| |||| |||||||| |||||||||||||||| ||||||||||| ||||    
T  12219 gaagttagagttttgaaaagaagctagggttttgaatttcaaattgattgtt-aaagagtaggtaacccaatgaattaacataagaattgatgttcaggt 12121  T
Q  214 tgtagaataacaataggtgatgt 236  Q
    ||||||||||  |||||||||||    
T  12120 tgtagaataatcataggtgatgt 12098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 12377 - 12323
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgt 55  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||    
T  12377 gtaggttgtagttttggaaatttgagaattaggtttagaagttgtaataggttgt 12323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 61 - 102
Target Start/End: Complemental strand, 12253 - 12212
Alignment:
Q  61 ttgtagaattgattgttggaattaagatgttaatgaagttag 102  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  12253 ttgtagaattgattgttggaattaagatgttaatgaagttag 12212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 66; Significance: 3e-29; HSPs: 4)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 132 - 236
Target Start/End: Original strand, 18950 - 19055
Alignment:
Q  132 agaagttagggttttgat-ttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaatagg 230  Q
    ||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||| ||| |||  ||| |||||| |||||||||||||||||||||    
T  18950 agaagttagggtttttaaattgcaatttgattgttgaaagtgtaggtaatccaatgaactaatataaaaatcgatgttcaggttgtagaataacaatagg 19049  T
Q  231 tgatgt 236  Q
    ||||||    
T  19050 tgatgt 19055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 143 - 228
Target Start/End: Original strand, 158971 - 159056
Alignment:
Q  143 ttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaata 228  Q
    |||||| ||| ||||||||||||||| |||||||| |||||||||||||| |||  |||||||||| |||||||||| ||| ||||    
T  158971 ttttgaattgaaatttgattgttgaaggtgtaggtgatccaatgaattaatataaaaattgatgttcaggttgtagagtaataata 159056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 16667 - 16718
Alignment:
Q  132 agaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatcca 183  Q
    ||||||||||||||| | |||||||||||||||| |||||||||||||||||    
T  16667 agaagttagggttttaaattgcaatttgattgttcaaagtgtaggtaatcca 16718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 158891 - 158944
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttg 54  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||| || ||||||    
T  158891 gtaggttgtagttttgggaatttgggaattagggttagaagttgcaaatggttg 158944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 28467 - 28568
Alignment:
Q  132 agaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggt 231  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||  |||||||| | |||||||||| ||| |||| ||    
T  28467 agaagttagggttttgaattgcaatttgattgttgaaggtgtaggtaatccaatgaattaatataaaaattgatggtcaggttgtagagtaataataagt 28566  T
Q  232 ga 233  Q
    ||    
T  28567 ga 28568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 28398 - 28451
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttg 54  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||| || ||||||    
T  28398 gtaggttgtagttttgggaatttggaaattagggttagaagttgcaaatggttg 28451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 35602 - 35703
Alignment:
Q  132 agaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggt 231  Q
    ||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||| |||  |||||||||| |||||||||| ||| |||| ||    
T  35602 agaagttagggttttgaattgcaatttgattgttgaaggtgtagataatccaatgaattaatataaaaattgatgttgaggttgtagagtaataataagt 35701  T
Q  232 ga 233  Q
    ||    
T  35702 ga 35703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 35533 - 35586
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttg 54  Q
    ||||||||||||| ||| ||||||||||||| | |||||||||| || ||||||    
T  35533 gtaggttgtagttttgggaatttgggaattaaggttagaagttgcaaatggttg 35586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 17052 - 16971
Alignment:
Q  148 atttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaatag 229  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||  |||||||||| ||||||||||||||||||||    
T  17052 atttgcaatttgattgttgaaagagtaggtaatccaatgaattaatataaaaattgatgttcaggttgtagaataacaatag 16971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 148 - 229
Target Start/End: Complemental strand, 26583 - 26502
Alignment:
Q  148 atttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaatag 229  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||  |||||||||| ||||||||||||||||||||    
T  26583 atttgcaatttgattgttgaaagagtaggtaatccaatgaattaatataaaaattgatgttcaggttgtagaataacaatag 26502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 132 - 236
Target Start/End: Original strand, 38534 - 38637
Alignment:
Q  132 agaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggt 231  Q
    |||||||||| |||| | || |||||||||||||||||||||||||||||||||||||||||||   |||||||||| ||||||| ||||||||||||||    
T  38534 agaagttagg-ttttaaattacaatttgattgttgaaagtgtaggtaatccaatgaattaacatgaaaattgatgttcaggttgtggaataacaataggt 38632  T
Q  232 gatgt 236  Q
     ||||    
T  38633 aatgt 38637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 150 - 229
Target Start/End: Original strand, 59764 - 59843
Alignment:
Q  150 ttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaatag 229  Q
    ||||||||||||||||||||  ||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||    
T  59764 ttgcaatttgattgttgaaatagtaggtaatccaatgaattaatataaaaattgatgtttaggttgtagaataacaatag 59843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 95 - 192
Target Start/End: Original strand, 40276 - 40373
Alignment:
Q  95 gaagttagggttgtgaaaagaagttagagttttgaaaagaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaa 192  Q
    ||||||||| || |||||||||||||| ||| |||||||||||||||||||||| ||| ||||||||| ||||||||||| ||||||  |||||||||    
T  40276 gaagttaggattttgaaaagaagttagggttgtgaaaagaagttagggttttgaattgaaatttgattcttgaaagtgtaagtaatctgatgaattaa 40373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 86 - 144
Target Start/End: Original strand, 40248 - 40306
Alignment:
Q  86 gatgttaatgaagttagggttgtgaaaagaagttagagttttgaaaagaagttagggtt 144  Q
    |||||||  |||||||||||| ||||||||||||||  |||||||||||||||||||||    
T  40248 gatgttatagaagttagggttttgaaaagaagttaggattttgaaaagaagttagggtt 40306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 228
Target Start/End: Complemental strand, 28653 - 28579
Alignment:
Q  154 aatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaata 228  Q
    |||||||||||||||||||||||||||| ||||||||||||||  |||||||||| |||||||||||||| ||||    
T  28653 aatttgattgttgaaagtgtaggtaatctaatgaattaacataaaaattgatgttcaggttgtagaataataata 28579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1800 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold1800
Description:

Target: scaffold1800; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 236
Target Start/End: Complemental strand, 567 - 463
Alignment:
Q  132 agaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacata--tgaattgatgtttaggttgtagaataacaatag 229  Q
    ||||||||||  ||||| ||||||||||||||||||||||||||||||| ||||||||||| |||    ||||||||||  |||||||||||||||||||    
T  567 agaagttagg--tttgaattgcaatttgattgttgaaagtgtaggtaattcaatgaattaatataatacaattgatgttcgggttgtagaataacaatag 470  T
Q  230 gtgatgt 236  Q
    || ||||    
T  469 gtaatgt 463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0848 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 2090 - 2155
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtag 66  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||| ||||    
T  2090 gtaggttgtagttttggaaatttgggaattaggtttataagttgtaattggttggtttaatagtag 2155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 132 - 217
Target Start/End: Complemental strand, 13354 - 13269
Alignment:
Q  132 agaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgta 217  Q
    ||||||||||||||||| |||||||||||||||||||  ||||||||| |||||||||| | |||  |||||||||| ||||||||    
T  13354 agaagttagggttttgaattgcaatttgattgttgaagatgtaggtaacccaatgaattgatataaaaattgatgttcaggttgta 13269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 121 - 66
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  121 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 66  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 537 - 592
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  537 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 2547 - 2492
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  2547 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 2492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 3165 - 3110
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  3165 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 3110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 130 - 225
Target Start/End: Original strand, 18201 - 18296
Alignment:
Q  130 aaagaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataaca 225  Q
    ||||||||||||||||||| ||| ||||||||| ||||||||||| ||||||| |||||||||  |   | ||||||||||||||||||| |||||    
T  18201 aaagaagttagggttttgaattgtaatttgattattgaaagtgtaagtaatccgatgaattaatgtgaaagttgatgtttaggttgtagagtaaca 18296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 162
Target Start/End: Original strand, 7314 - 7346
Alignment:
Q  130 aaagaagttagggttttgatttgcaatttgatt 162  Q
    ||||||||||||||||||| |||||||||||||    
T  7314 aaagaagttagggttttgaattgcaatttgatt 7346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 224
Target Start/End: Complemental strand, 26655 - 26560
Alignment:
Q  129 aaaagaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataac 224  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||| ||||||  |||||||||  |   | ||||||||||||||||||| ||||    
T  26655 aaaagaagttagggttttgaattgcaatttgattcttgaaagtgtaagtaatctgatgaattaatgtgaaagttgatgtttaggttgtagagtaac 26560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 236
Target Start/End: Complemental strand, 23573 - 23470
Alignment:
Q  132 agaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggt 231  Q
    |||||||||| |||| | || |||||| |||||| ||||||||||||||| |||||||||||||   ||||||| || |||||||||||||| |||||||    
T  23573 agaagttagg-ttttaaattacaattttattgttaaaagtgtaggtaatcaaatgaattaacatgaaaattgattttcaggttgtagaataataataggt 23475  T
Q  232 gatgt 236  Q
     ||||    
T  23474 aatgt 23470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 1147 - 1093
Alignment:
Q  2 taggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  1147 taggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 1093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 141 - 223
Target Start/End: Original strand, 8897 - 8979
Alignment:
Q  141 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    |||||||| || ||||||||||||||| || ||||||| || ||||||||||| || ||||||||||| ||||||||||||||    
T  8897 ggttttgaatttcaatttgattgttgagagagtaggtagtcgaatgaattaacgtaagaattgatgttcaggttgtagaataa 8979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 154 - 236
Target Start/End: Original strand, 7626 - 7708
Alignment:
Q  154 aatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtgatgt 236  Q
    ||||||||||||| || |||||| |||||||||||||||| |   |||||||||| |||||||||||||||||||||| ||||    
T  7626 aatttgattgttggaaatgtaggaaatccaatgaattaacgtgaaaattgatgttcaggttgtagaataacaataggtaatgt 7708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 56
Target Start/End: Original strand, 12603 - 12657
Alignment:
Q  2 taggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  12603 taggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 12657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 5366 - 5311
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||    
T  5366 gtaggttgtagttatgggaatttgggaattaggttttgaagtcgtaattggttgtt 5311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 328364 - 328414
Alignment:
Q  6 ttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  328364 ttgtagttatggaaatttgggaattaggtttcgaagttgtaattggttgtt 328414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 72909 - 72872
Alignment:
Q  19 aatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    |||||| ||||||||||| |||||||||||||||||||    
T  72909 aatttgtgaattaggttttgaagttgtaattggttgtt 72872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 47; Significance: 6e-18; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 31976 - 31922
Alignment:
Q  2 taggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  31976 taggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 31922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 2 - 56
Target Start/End: Complemental strand, 37283 - 37229
Alignment:
Q  2 taggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  37283 taggttgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 37229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 77670 - 77615
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||| ||||||||||| ||||||||||| |||||||    
T  77670 gtaggttgtagttatgggaatttgagaattaggttttgaagttgtaataggttgtt 77615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 45; Significance: 9e-17; HSPs: 3)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 113037 - 113093
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttt 57  Q
    |||||||||| || ||| |||||||||||||||||||||||||||||||||||||||    
T  113037 gtaggttgtaattttgggaatttgggaattaggtttagaagttgtaattggttgttt 113093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 81550 - 81501
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattg 50  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  81550 gtaggttgtagttttgggaatttgggaattaggtttagaagttgtaattg 81501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 117890 - 117926
Alignment:
Q  21 tttgggaattaggtttagaagttgtaattggttgttt 57  Q
    |||||||||||||||||||||||||||||||||||||    
T  117890 tttgggaattaggtttagaagttgtaattggttgttt 117926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1766 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold1766
Description:

Target: scaffold1766; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 765 - 820
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||    
T  765 gtaggttgtagttatgggaatttgggaattaggttttgaagttgtaattagttgtt 820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 1188 - 1133
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||| | |||||||||||||||||| |||||||||||||||||||    
T  1188 gtaggttgtagttattgtaatttgggaattaggttttgaagttgtaattggttgtt 1133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 4783 - 4838
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    |||||| |||||||||| |||||||||||||||||| |||||||||||||||||||    
T  4783 gtaggtcgtagttatgggaatttgggaattaggttttgaagttgtaattggttgtt 4838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 11343 - 11398
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||    
T  11343 gtaggttgtagttatgggaatttgggaattaagttttgaagttgtaattggttgtt 11398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 21862 - 21917
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    |||||||||| |||||| |||||||||||||||||| |||||||||||||||||||    
T  21862 gtaggttgtatttatgggaatttgggaattaggttttgaagttgtaattggttgtt 21917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 34322 - 34267
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| ||||||||||| |||||| |||||||||||||||||||    
T  34322 gtaggttgtagttatgggaatttgggaatcaggttttgaagttgtaattggttgtt 34267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 58729 - 58674
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||    
T  58729 gtaggttgtagttatgggaatttgagaattaggttttgaagttgtaattggttgtt 58674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1939 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1939
Description:

Target: scaffold1939; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 219
Target Start/End: Complemental strand, 63 - 1
Alignment:
Q  157 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtaga 219  Q
    |||||||||||||| ||||||||||||| ||||||||||| ||||||||||| | ||||||||    
T  63 ttgattgttgaaagagtaggtaatccaaagaattaacataagaattgatgttcatgttgtaga 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 223
Target Start/End: Complemental strand, 35424 - 35362
Alignment:
Q  161 ttgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    ||||| |||||||| |||||||||| |||||||||| ||||||||||| ||||||||||||||    
T  35424 ttgttaaaagtgtatgtaatccaataaattaacataagaattgatgttcaggttgtagaataa 35362  T

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Target: scaffold0113; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 35467 - 35420
Alignment:
Q  9 tagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||| ||| |||||||||||||||||| ||||| |||||||||||||    
T  35467 tagttttgggaatttgggaattaggttttgaagtcgtaattggttgtt 35420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 230
Target Start/End: Complemental strand, 3148 - 3068
Alignment:
Q  150 ttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaatagg 230  Q
    ||||||||| ||||||||||||||||||||| ||||||||||  |||  ||||||||||  |||| |||||||| ||||||    
T  3148 ttgcaatttaattgttgaaagtgtaggtaattcaatgaattagtataaaaattgatgttctggttttagaataataatagg 3068  T

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Target: scaffold0175 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 8625 - 8557
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaa-ttaggtttagaagttgtaattggttgttttaattgtagaa 68  Q
    ||||||||||||| ||| |||||||||| ||||| |||||||||||||||||||| |||||| ||||||    
T  8625 gtaggttgtagttttgggaatttgggaaattagggttagaagttgtaattggttgatttaatagtagaa 8557  T

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Target: scaffold0334 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 501 - 446
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||  ||||||| |||||||||| |||||||||||||||||||    
T  501 gtaggttgtagttatgagaatttggaaattaggttttgaagttgtaattggttgtt 446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 13461 - 13516
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||| ||| |||||||||||||||||| |||||| ||||||||||||    
T  13461 gtaggttgtagttttgggaatttgggaattaggttttgaagttataattggttgtt 13516  T

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Target: scaffold0028 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 3121 - 3188
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaa 68  Q
    ||||||||||||| ||| ||||| ||||||||| |||||||||||||||||||| || ||| ||||||    
T  3121 gtaggttgtagttttgggaatttaggaattagggttagaagttgtaattggttgattaaatggtagaa 3188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 169068 - 169123
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||| ||||||    
T  169068 gtaggttgtagttatgggaatttgggaattaggttttgaacttgtaattagttgtt 169123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 143594 - 143539
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    |||||||||||||||   ||||||||||||| |||| |||||||||||||||||||    
T  143594 gtaggttgtagttattttaatttgggaattatgttttgaagttgtaattggttgtt 143539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 3)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 223
Target Start/End: Complemental strand, 11173 - 11093
Alignment:
Q  141 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    |||||||||||| |||| ||||||| |||| ||||||||| ||||||||||||||| ||||||| ||| ||| ||||||||||    
T  11173 ggttttgatttggaatt-gattgtt-aaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataa 11093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 189
Target Start/End: Complemental strand, 1222 - 1174
Alignment:
Q  141 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaat 189  Q
    |||||||| || ||||||| ||||||||||| |||||||||||||||||    
T  1222 ggttttgaatttcaatttggttgttgaaagtctaggtaatccaatgaat 1174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 189
Target Start/End: Complemental strand, 6728 - 6680
Alignment:
Q  141 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaat 189  Q
    |||||||| || ||||||| ||||||||||| |||||||||||||||||    
T  6728 ggttttgaatttcaatttggttgttgaaagtctaggtaatccaatgaat 6680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 69970 - 70043
Alignment:
Q  157 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggt 231  Q
    ||||||||| |||| ||||||||||||||||||||||||| ||||||| ||| ||| ||||||| || |||||||    
T  69970 ttgattgtt-aaagagtaggtaatccaatgaattaacataagaattgaagttcaggctgtagaaaaaaaataggt 70043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 158 - 223
Target Start/End: Original strand, 21895 - 21959
Alignment:
Q  158 tgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    |||||||| |||| ||||||||| ||||||||||||||| ||||||||||| ||| ||||||||||    
T  21895 tgattgtt-aaagagtaggtaattcaatgaattaacataagaattgatgttcaggctgtagaataa 21959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 37; Significance: 0.000000000006; HSPs: 3)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 67
Target Start/End: Original strand, 10840 - 10888
Alignment:
Q  19 aatttgggaattaggtttagaagttgtaattggttgttttaattgtaga 67  Q
    ||||||||||||||| |||||||||||||||||||||| |||| |||||    
T  10840 aatttgggaattagggttagaagttgtaattggttgttgtaatagtaga 10888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 1872 - 1807
Alignment:
Q  157 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    ||||||||| |||| ||||||||| ||||||||||||||| ||||||| ||| ||| ||||||||||    
T  1872 ttgattgtt-aaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataa 1807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 53
Target Start/End: Original strand, 5124 - 5156
Alignment:
Q  21 tttgggaattaggtttagaagttgtaattggtt 53  Q
    ||||||||||||| |||||||||||||||||||    
T  5124 tttgggaattagggttagaagttgtaattggtt 5156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 61
Target Start/End: Complemental strand, 4664 - 4605
Alignment:
Q  2 taggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaat 61  Q
    |||||||| ||| ||| |||||| |||||||||||||||||||||||| |||| ||||||    
T  4664 taggttgtggttttgggaatttgagaattaggtttagaagttgtaattagttggtttaat 4605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 60
Target Start/End: Original strand, 18731 - 18770
Alignment:
Q  21 tttgggaattaggtttagaagttgtaattggttgttttaa 60  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  18731 tttgggaattaggtttagaagttgtaattggttgatttaa 18770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 60
Target Start/End: Complemental strand, 13911 - 13872
Alignment:
Q  21 tttgggaattaggtttagaagttgtaattggttgttttaa 60  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  13911 tttgggaattaggtttagaagttgtaattggttgatttaa 13872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 135573 - 135640
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaattggttgttttaattgtagaa 68  Q
    ||||||||||||| ||| ||||||||||||||  |||||||||| ||||||||  |||||| ||||||    
T  135573 gtaggttgtagttttgggaatttgggaattagagttagaagttgaaattggttaatttaatagtagaa 135640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 211
Target Start/End: Complemental strand, 4964 - 4911
Alignment:
Q  157 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttag 211  Q
    ||||||||| |||| ||||||||||||||||||||||||| ||||||| ||||||    
T  4964 ttgattgtt-aaagagtaggtaatccaatgaattaacataagaattgaagtttag 4911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 8895 - 8830
Alignment:
Q  157 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    ||||||||| |||| ||||||||| ||||||||||||||| ||||||| ||| ||| ||||||||||    
T  8895 ttgattgtt-aaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataa 8830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 211
Target Start/End: Complemental strand, 4964 - 4911
Alignment:
Q  157 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttag 211  Q
    ||||||||| |||| ||||||||||||||||||||||||| ||||||| ||||||    
T  4964 ttgattgtt-aaagagtaggtaatccaatgaattaacataagaattgaagtttag 4911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 236
Target Start/End: Complemental strand, 31869 - 31787
Alignment:
Q  154 aatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataacaataggtgatgt 236  Q
    ||||||||| ||||||||||||  ||||||||||||||| ||   ||||||||||  ||||||||||||| | ||||| ||||    
T  31869 aatttgatttttgaaagtgtagaaaatccaatgaattaaaatgaaaattgatgttctggttgtagaataaaagtaggtaatgt 31787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 21032 - 20967
Alignment:
Q  157 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    ||||||||| |||| ||||||||| ||||||||||||||| ||||||| ||| ||| ||||||||||    
T  21032 ttgattgtt-aaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataa 20967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 223
Target Start/End: Original strand, 14703 - 14768
Alignment:
Q  157 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    ||||||||| |||| |||||||||| ||| |||||||||| ||||||| ||| ||||||||||||||    
T  14703 ttgattgtt-aaagagtaggtaatctaataaattaacataagaattgaagttcaggttgtagaataa 14768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 223
Target Start/End: Original strand, 23761 - 23826
Alignment:
Q  157 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    ||||||||| |||| |||||||||| ||| |||||||||| ||||||| ||| ||||||||||||||    
T  23761 ttgattgtt-aaagagtaggtaatctaataaattaacataagaattgaagttcaggttgtagaataa 23826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 223
Target Start/End: Original strand, 29333 - 29398
Alignment:
Q  157 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    ||||||||| |||| ||||||||| ||||||||||||||| ||||||| ||| ||| ||||||||||    
T  29333 ttgattgtt-aaagagtaggtaattcaatgaattaacataagaattgaagttcaggctgtagaataa 29398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 198 - 236
Target Start/End: Complemental strand, 163230 - 163192
Alignment:
Q  198 gaattgatgtttaggttgtagaataacaataggtgatgt 236  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  163230 gaattgatgttcaggttgtagaataacaataggtgatgt 163192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 11355 - 11318
Alignment:
Q  19 aatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    |||||||||||||||||| |||||||||||||||||||    
T  11355 aatttgggaattaggttttgaagttgtaattggttgtt 11318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 5235 - 5198
Alignment:
Q  19 aatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  5235 aatttgggaattacgttttgaagttgtaattggttgtt 5198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 189
Target Start/End: Complemental strand, 19066 - 19019
Alignment:
Q  141 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaat 189  Q
    |||||||| || |||||||||||||||| ||||||||||||||||||||    
T  19066 ggttttgaatttcaatttgattgttgaa-gtgtaggtaatccaatgaat 19019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 78254 - 78298
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgt 45  Q
    ||||||||||||||||| ||||||| |||||||||| ||||||||    
T  78254 gtaggttgtagttatgggaatttggaaattaggttttgaagttgt 78298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 24200 - 24235
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggttt 36  Q
    ||||||||||||||||| ||||||||||||||||||    
T  24200 gtaggttgtagttatgggaatttgggaattaggttt 24235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1434 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1434
Description:

Target: scaffold1434; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 224
Target Start/End: Original strand, 1449 - 1543
Alignment:
Q  130 aaagaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataac 224  Q
    |||| |||||| ||||| |  |||||||||||| ||||||||||| ||||||  |||||||||  |   | ||||||||||||||||||| ||||    
T  1449 aaaggagttagagttttcaactgcaatttgattcttgaaagtgtaagtaatctgatgaattaatgtgaaagttgatgtttaggttgtagagtaac 1543  T

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Target: scaffold1102 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1102
Description:

Target: scaffold1102; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 192
Target Start/End: Original strand, 2041 - 2103
Alignment:
Q  130 aaagaagttagggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaa 192  Q
    |||||||||||  |||||| |||||||  |||| ||||| ||||| |||||||||||||||||    
T  2041 aaagaagttagaattttgaattgcaataggattcttgaatgtgtaagtaatccaatgaattaa 2103  T

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Target: scaffold0594 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 2176 - 2110
Alignment:
Q  157 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    |||||||||||||| ||||||||||| ||||| |||  ||  ||||| |||| ||||||||||||||    
T  2176 ttgattgttgaaagagtaggtaatccgatgaactaaggtaataattggtgttcaggttgtagaataa 2110  T

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Target: scaffold0035 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 223
Target Start/End: Original strand, 43888 - 43969
Alignment:
Q  141 ggttttgatttgcaatttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgtttaggttgtagaataa 223  Q
    |||||||||||| |||| |||||||||||  |||| |||| |||| |||||   ||  |||||||||||||||||||||||||    
T  43888 ggttttgatttggaatt-gattgttgaaaaagtagataattcaattaattagtgtacaaattgatgtttaggttgtagaataa 43969  T

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Target: scaffold0285 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 19726 - 19689
Alignment:
Q  19 aatttgggaattaggtttagaagttgtaattggttgtt 56  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  19726 aatttgggaattaggtttttaagttgtaattggttgtt 19689  T

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Target: scaffold0047 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 79025 - 78992
Alignment:
Q  23 tgggaattaggtttagaagttgtaattggttgtt 56  Q
    |||||||||||||| |||||||||||||||||||    
T  79025 tgggaattaggttttgaagttgtaattggttgtt 78992  T

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Target: scaffold0251 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 20155 - 20202
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagttgtaatt 49  Q
    ||||||| ||||| ||| ||||||||||||| |||||||||||||||||    
T  20155 gtaggttatagtt-tgggaatttgggaattatgtttagaagttgtaatt 20202  T

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Target: scaffold0056 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 67103 - 67043
Alignment:
Q  1 gtaggttgtagttatggaaatttgggaattaggtttagaagtt-gtaattggttgttttaa 60  Q
    ||||||||||||| | | ||||||||||| ||||||||||||| | ||||||||| |||||    
T  67103 gtaggttgtagttttaggaatttgggaataaggtttagaagttggaaattggttggtttaa 67043  T

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