View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10161_low_32 (Length: 250)

Name: NF10161_low_32
Description: NF10161
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10161_low_32
NF10161_low_32
[»] chr8 (25 HSPs)
chr8 (20-237)||(42260857-42261075)
chr8 (145-231)||(2968580-2968667)
chr8 (178-237)||(35779066-35779125)
chr8 (146-230)||(7579850-7579934)
chr8 (146-230)||(10338817-10338901)
chr8 (47-194)||(19384292-19384441)
chr8 (146-230)||(30026875-30026959)
chr8 (146-230)||(39067684-39067768)
chr8 (146-237)||(24791156-24791247)
chr8 (146-205)||(9501640-9501698)
chr8 (156-230)||(14600693-14600768)
chr8 (155-230)||(39092960-39093035)
chr8 (156-237)||(3204744-3204826)
chr8 (146-230)||(2234465-2234549)
chr8 (152-231)||(6843067-6843144)
chr8 (171-230)||(26673657-26673715)
chr8 (146-205)||(31202508-31202566)
chr8 (146-205)||(31308198-31308256)
chr8 (146-197)||(41361782-41361832)
chr8 (178-231)||(7281729-7281783)
chr8 (146-230)||(12329676-12329761)
chr8 (145-227)||(30261805-30261887)
chr8 (145-203)||(32778973-32779031)
chr8 (156-205)||(11161941-11161990)
chr8 (146-237)||(2025197-2025288)
[»] chr1 (34 HSPs)
chr1 (122-231)||(32301364-32301473)
chr1 (54-230)||(18889031-18889209)
chr1 (47-231)||(38783016-38783202)
chr1 (145-237)||(29551730-29551822)
chr1 (145-228)||(34899029-34899112)
chr1 (156-237)||(45750537-45750619)
chr1 (146-230)||(12871671-12871755)
chr1 (165-237)||(50107895-50107967)
chr1 (145-203)||(28399336-28399394)
chr1 (146-230)||(424278-424362)
chr1 (146-237)||(20411623-20411714)
chr1 (146-229)||(29726584-29726667)
chr1 (146-237)||(32784158-32784249)
chr1 (146-205)||(4882372-4882430)
chr1 (160-230)||(15791262-15791333)
chr1 (146-205)||(27534749-27534807)
chr1 (156-237)||(51418072-51418154)
chr1 (156-205)||(10627059-10627108)
chr1 (145-237)||(14265333-14265425)
chr1 (146-230)||(15391239-15391323)
chr1 (146-230)||(42490943-42491027)
chr1 (146-230)||(44517197-44517281)
chr1 (171-231)||(31427107-31427167)
chr1 (156-203)||(3232847-3232894)
chr1 (145-231)||(43503871-43503957)
chr1 (126-220)||(45425469-45425564)
chr1 (42-77)||(50108083-50108118)
chr1 (156-198)||(18343673-18343715)
chr1 (146-230)||(13488523-13488607)
chr1 (146-226)||(37822336-37822416)
chr1 (145-205)||(9298427-9298487)
chr1 (178-233)||(15312593-15312646)
chr1 (146-237)||(28678110-28678201)
chr1 (154-190)||(30678313-30678349)
[»] chr3 (32 HSPs)
chr3 (126-236)||(32408789-32408900)
chr3 (45-237)||(5327465-5327658)
chr3 (145-231)||(4219228-4219314)
chr3 (145-237)||(106023-106116)
chr3 (146-237)||(2147776-2147868)
chr3 (145-240)||(42167998-42168093)
chr3 (146-230)||(54239013-54239097)
chr3 (146-237)||(48652428-48652519)
chr3 (146-206)||(34960878-34960937)
chr3 (146-205)||(40013293-40013351)
chr3 (146-204)||(34103739-34103796)
chr3 (145-230)||(55090578-55090663)
chr3 (146-230)||(14585512-14585596)
chr3 (146-230)||(35174754-35174838)
chr3 (146-230)||(36691794-36691878)
chr3 (146-237)||(11819133-11819224)
chr3 (122-190)||(33937416-33937483)
chr3 (145-205)||(36624715-36624774)
chr3 (156-230)||(32080749-32080824)
chr3 (156-230)||(33637462-33637537)
chr3 (146-205)||(41868315-41868373)
chr3 (146-205)||(48400949-48401007)
chr3 (146-205)||(49628108-49628166)
chr3 (164-230)||(53402688-53402755)
chr3 (146-204)||(13701994-13702051)
chr3 (146-230)||(3312493-3312577)
chr3 (146-230)||(22485015-22485099)
chr3 (146-230)||(31270376-31270460)
chr3 (172-237)||(33605224-33605289)
chr3 (156-205)||(38527322-38527371)
chr3 (146-203)||(40883891-40883947)
chr3 (155-230)||(37451797-37451872)
[»] chr2 (36 HSPs)
chr2 (145-230)||(17792522-17792607)
chr2 (54-230)||(11581116-11581294)
chr2 (148-230)||(20607301-20607382)
chr2 (126-230)||(44150028-44150132)
chr2 (153-237)||(15028291-15028375)
chr2 (146-230)||(34416749-34416832)
chr2 (191-237)||(40039289-40039335)
chr2 (146-230)||(12704737-12704821)
chr2 (150-231)||(20598623-20598703)
chr2 (146-230)||(27095755-27095839)
chr2 (146-230)||(31908803-31908887)
chr2 (145-230)||(32015273-32015357)
chr2 (146-230)||(38535292-38535376)
chr2 (146-237)||(13740640-13740731)
chr2 (156-230)||(9978656-9978731)
chr2 (146-205)||(10287019-10287077)
chr2 (156-230)||(20561119-20561194)
chr2 (155-230)||(27666270-27666344)
chr2 (146-205)||(28231110-28231168)
chr2 (145-203)||(6431402-6431460)
chr2 (157-230)||(7072935-7073009)
chr2 (126-232)||(27665648-27665752)
chr2 (49-129)||(7582181-7582261)
chr2 (146-230)||(25067902-25067986)
chr2 (146-230)||(28261875-28261959)
chr2 (126-225)||(15261405-15261504)
chr2 (145-205)||(17116415-17116475)
chr2 (145-237)||(38450286-38450378)
chr2 (156-230)||(12891106-12891181)
chr2 (146-205)||(33012127-33012185)
chr2 (156-230)||(41797653-41797728)
chr2 (146-205)||(43474141-43474199)
chr2 (145-203)||(17767566-17767624)
chr2 (156-237)||(32314501-32314583)
chr2 (146-203)||(35333555-35333611)
chr2 (146-233)||(4604291-4604378)
[»] chr6 (17 HSPs)
chr6 (156-235)||(31801213-31801292)
chr6 (126-230)||(9044068-9044171)
chr6 (145-237)||(8508191-8508283)
chr6 (146-230)||(12481357-12481441)
chr6 (149-237)||(8978720-8978808)
chr6 (146-205)||(2304823-2304881)
chr6 (156-230)||(19402795-19402870)
chr6 (156-237)||(4393829-4393911)
chr6 (146-230)||(15590066-15590150)
chr6 (145-230)||(15470224-15470307)
chr6 (146-237)||(35038748-35038835)
chr6 (146-230)||(4921868-4921952)
chr6 (146-230)||(8693644-8693728)
chr6 (146-230)||(21507795-21507879)
chr6 (146-230)||(23654300-23654384)
chr6 (145-237)||(29284800-29284893)
chr6 (146-237)||(2488188-2488279)
[»] chr5 (27 HSPs)
chr5 (131-230)||(374317-374416)
chr5 (149-233)||(26240663-26240747)
chr5 (157-230)||(14534959-14535032)
chr5 (145-240)||(25487656-25487752)
chr5 (146-230)||(17331378-17331462)
chr5 (146-230)||(27241114-27241198)
chr5 (146-230)||(33164455-33164539)
chr5 (146-230)||(39179815-39179899)
chr5 (146-237)||(28040679-28040770)
chr5 (146-231)||(6635300-6635385)
chr5 (146-230)||(178091-178177)
chr5 (146-230)||(12891726-12891810)
chr5 (146-230)||(29097839-29097923)
chr5 (146-230)||(34431110-34431194)
chr5 (146-237)||(17096219-17096310)
chr5 (100-230)||(17523510-17523641)
chr5 (146-205)||(3740407-3740465)
chr5 (146-205)||(6281094-6281152)
chr5 (156-230)||(17687264-17687339)
chr5 (146-205)||(17699603-17699661)
chr5 (149-230)||(585860-585942)
chr5 (156-237)||(42396492-42396574)
chr5 (145-237)||(17522833-17522925)
chr5 (162-230)||(18653847-18653916)
chr5 (146-203)||(32347729-32347785)
chr5 (146-237)||(20483236-20483327)
chr5 (145-189)||(26905667-26905711)
[»] chr7 (34 HSPs)
chr7 (145-230)||(39990162-39990247)
chr7 (146-230)||(43847120-43847204)
chr7 (146-230)||(10094491-10094575)
chr7 (145-237)||(14811270-14811362)
chr7 (145-237)||(15258265-15258357)
chr7 (146-230)||(45457543-45457627)
chr7 (156-231)||(26161039-26161115)
chr7 (126-237)||(27705050-27705161)
chr7 (126-235)||(43256532-43256641)
chr7 (153-230)||(6646578-6646655)
chr7 (126-230)||(14810633-14810737)
chr7 (126-230)||(15257628-15257732)
chr7 (146-230)||(24320210-24320294)
chr7 (146-230)||(42603756-42603840)
chr7 (146-237)||(1281117-1281208)
chr7 (50-235)||(5237905-5238092)
chr7 (146-237)||(28664892-28664983)
chr7 (178-230)||(37714559-37714611)
chr7 (160-230)||(10574444-10574515)
chr7 (144-230)||(10623847-10623933)
chr7 (146-198)||(15674632-15674683)
chr7 (146-205)||(11833069-11833127)
chr7 (145-196)||(29352294-29352345)
chr7 (145-235)||(33476634-33476725)
chr7 (51-118)||(35306575-35306642)
chr7 (146-205)||(39532988-39533046)
chr7 (156-237)||(4621347-4621429)
chr7 (164-237)||(36719532-36719606)
chr7 (146-203)||(21990712-21990768)
chr7 (156-205)||(32643071-32643120)
chr7 (146-230)||(32740803-32740887)
chr7 (146-198)||(5684415-5684466)
chr7 (146-198)||(5709465-5709516)
chr7 (146-198)||(42644726-42644777)
[»] chr4 (31 HSPs)
chr4 (145-237)||(12717097-12717190)
chr4 (146-230)||(46829457-46829541)
chr4 (146-237)||(8517436-8517527)
chr4 (146-238)||(7060374-7060466)
chr4 (146-230)||(24825699-24825783)
chr4 (146-230)||(25658217-25658301)
chr4 (146-230)||(30202088-30202172)
chr4 (145-237)||(51958399-51958492)
chr4 (145-205)||(6882005-6882064)
chr4 (146-237)||(39837645-39837736)
chr4 (146-237)||(44757022-44757113)
chr4 (156-230)||(5814406-5814481)
chr4 (146-205)||(6911730-6911788)
chr4 (146-205)||(29268790-29268848)
chr4 (146-230)||(7083803-7083887)
chr4 (146-230)||(22757144-22757228)
chr4 (146-230)||(26674422-26674506)
chr4 (145-189)||(3159091-3159135)
chr4 (146-237)||(11210293-11210384)
chr4 (155-227)||(24789250-24789321)
chr4 (155-227)||(24818938-24819009)
chr4 (146-229)||(50801267-50801350)
chr4 (146-197)||(26742484-26742534)
chr4 (146-197)||(43244402-43244452)
chr4 (146-205)||(45351083-45351141)
chr4 (146-205)||(45360562-45360620)
chr4 (195-237)||(31932361-31932403)
chr4 (157-198)||(626569-626610)
chr4 (146-230)||(38944135-38944218)
chr4 (146-237)||(24611779-24611870)
chr4 (146-237)||(27090774-27090865)
[»] scaffold1379 (1 HSPs)
scaffold1379 (146-230)||(1073-1157)
[»] scaffold0886 (1 HSPs)
scaffold0886 (155-237)||(3721-3801)
[»] scaffold0294 (1 HSPs)
scaffold0294 (145-230)||(4054-4139)
[»] scaffold0238 (1 HSPs)
scaffold0238 (145-231)||(15666-15750)
[»] scaffold0312 (1 HSPs)
scaffold0312 (146-230)||(6187-6271)
[»] scaffold0056 (1 HSPs)
scaffold0056 (146-230)||(74214-74298)
[»] scaffold0321 (1 HSPs)
scaffold0321 (146-206)||(7136-7195)
[»] scaffold0432 (1 HSPs)
scaffold0432 (146-230)||(2405-2488)
[»] scaffold1350 (1 HSPs)
scaffold1350 (146-205)||(1624-1682)
[»] scaffold0001 (1 HSPs)
scaffold0001 (146-205)||(404271-404329)
[»] scaffold0536 (1 HSPs)
scaffold0536 (146-230)||(2952-3036)


Alignment Details
Target: chr8 (Bit Score: 183; Significance: 4e-99; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 20 - 237
Target Start/End: Original strand, 42260857 - 42261075
Alignment:
Q  20 agtttccccttttccaaactagagtcatcacaacttttcttcttcttgatctaccaaaaattggtgatttaggtaaactttgacccaaaattaccccttg 119  Q
    ||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  42260857 agtttcctctttcccaaactagagtcgtcacaacttttcttcttcttgatctaccaaaaattggtgatttaggtaaactttgacccaaaattacccctcg 42260956  T
Q  120 agattgtttt-atttctctattagcaaaataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgt 218  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||    
T  42260957 agattgtttttatttctctattagcaaaataagtgattttcacatatttttgattttctttcgtttgttttggtgatttcatcgtctagcacgactttgt 42261056  T
Q  219 ttattttgatttttcgtct 237  Q
    |||||||||||||||||||    
T  42261057 ttattttgatttttcgtct 42261075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 2968580 - 2968667
Alignment:
Q  145 aaataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgatttt 231  Q
    ||||||||||||||||||||||||  |||||| |||||||||||| |||||||  ||||||  |||| ||||||||| ||||||||||    
T  2968580 aaataagtgattttcacatatttttagttttctttcgtttgtttttgtgattttgtcgtctctgcacaactttgtttgttttgatttt 2968667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 178 - 237
Target Start/End: Complemental strand, 35779125 - 35779066
Alignment:
Q  178 ttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgatttttcgtct 237  Q
    |||||||||||| ||| |||  |||||||||||||||||||||||||||||||| |||||    
T  35779125 ttcgtttgtttttgtgtttttgtcgtctagcacgactttgtttattttgattttccgtct 35779066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 7579934 - 7579850
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| |||||||| ||||||  | |||||| ||||| |||||||||    
T  7579934 aataagtgattt-cacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgattt 7579850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 10338901 - 10338817
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtc-tagcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||  |||||| |||||||||||| |||||||| ||||| | | |||||||||||| |||||||||    
T  10338901 aataagtgattt-cacatattttttgttttctttcgtttgtttttgtgatttcgtcgtctttgaacgactttgtttgttttgattt 10338817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 194
Target Start/End: Original strand, 19384292 - 19384441
Alignment:
Q  47 tcacaacttttcttcttcttgatctaccaaaaattggtgattt-aggtaaactttgacccaaaattacccctt-gagattgttttatttctctattagca 144  Q
    |||||| |||||||||| ||||||||||||| |  |||||||| | || || ||||||||||||| ||||||| || ||  |||| ||||||| ||||      
T  19384292 tcacaatttttcttctttttgatctaccaaataagggtgatttaaagtcaattttgacccaaaataaccccttcgaaatgtttttctttctcttttagtt 19384391  T
Q  145 aaataagtgattttcacatattttcggttttccttcgtttgttttggtga 194  Q
    ||| |||| |||||||||||||||| | |||| | ||||| |||| ||||    
T  19384392 aaacaagtaattttcacatattttcagctttcttccgtttatttttgtga 19384441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 30026959 - 30026875
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| |||||||| ||||||  | |||||| ||||| |||||||||    
T  30026959 aataagtgattt-cacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgattt 30026875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 39067768 - 39067684
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtc-tagcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| |||||||| ||||| | | |||||| ||||| |||||||||    
T  39067768 aataagtgattt-cacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctttgaacgactatgtttgttttgattt 39067684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 24791247 - 24791156
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgatttttcgtct 237  Q
    ||||||||||||  |||||||||| |||||| |||||||||||| |||||||| ||||||  | |||||| ||||| ||||||||| ||||||    
T  24791247 aataagtgattta-acatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgatttctcgtct 24791156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 205
Target Start/End: Original strand, 9501640 - 9501698
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct 205  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| |||||||| ||||||    
T  9501640 aataagtgattt-cacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 9501698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 14600768 - 14600693
Alignment:
Q  156 tttcacatattttcggttttccttcgtttgttttggtgatttcatcgtc-tagcacgactttgtttattttgattt 230  Q
    |||||||||||||| |||||| |||||||||||| |||||||| ||||| | | |||||| ||||| |||||||||    
T  14600768 tttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctttgaacgactctgtttgttttgattt 14600693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 230
Target Start/End: Complemental strand, 39093035 - 39092960
Alignment:
Q  155 ttttcacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgattt 230  Q
    |||||| |||||||| |||||| || |||||||||  |||| ||||| |||  |||||||||||||||||||||||    
T  39093035 ttttcatatattttcagttttcgtttgtttgtttttatgatatcatcatctcacacgactttgtttattttgattt 39092960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 237
Target Start/End: Complemental strand, 3204826 - 3204744
Alignment:
Q  156 tttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgatttttcgtct 237  Q
    |||||||||||||| |||||| |||||||||||  |||||||| ||||||  | |||||| ||||| ||||||||| ||||||    
T  3204826 tttcacatattttctgttttctttcgtttgtttatgtgatttcgtcgtctctgaacgactctgtttgttttgatttctcgtct 3204744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 2234549 - 2234465
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||  |||||| |||||||||||| |||||||| ||||||  | |||||| ||||| |||||||||    
T  2234549 aataagtgattt-cacatattttttgttttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgattt 2234465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 231
Target Start/End: Complemental strand, 6843144 - 6843067
Alignment:
Q  152 tgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgatttt 231  Q
    ||||||||| | ||||||  ||||| ||||||| |||| |||||||||| |||||||||| ||  |||||||||||||||    
T  6843144 tgattttcataaattttcacttttctttcgtttatttttgtgatttcatagtctagcacgtct--gtttattttgatttt 6843067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 230
Target Start/End: Complemental strand, 26673715 - 26673657
Alignment:
Q  171 gttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgattt 230  Q
    |||||| ||||||||||||  ||||| | |||||||||| ||||||||||||||||||||    
T  26673715 gttttctttcgtttgtttttatgatt-cgtcgtctagcaagactttgtttattttgattt 26673657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 205
Target Start/End: Original strand, 31202508 - 31202566
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct 205  Q
    |||||||||||| ||||||||||| |||||  |||||||||||| |||||||| ||||||    
T  31202508 aataagtgattt-cacatattttctgttttgtttcgtttgtttttgtgatttcgtcgtct 31202566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 205
Target Start/End: Original strand, 31308198 - 31308256
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct 205  Q
    |||||||||||| ||||||||||  |||||| |||||||||||| |||||||| ||||||    
T  31308198 aataagtgattt-cacatattttatgttttctttcgtttgtttttgtgatttcgtcgtct 31308256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 197
Target Start/End: Original strand, 41361782 - 41361832
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgattt 197  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| |||||||    
T  41361782 aataagtgattt-cacatattttctgttttctttcgtttgtttttgtgattt 41361832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 231
Target Start/End: Original strand, 7281729 - 7281783
Alignment:
Q  178 ttcgtttgttttggtgatttcatcgtc-tagcacgactttgtttattttgatttt 231  Q
    |||||||||||| |||||||||||||| | ||| |||| ||||||||||||||||    
T  7281729 ttcgtttgtttttgtgatttcatcgtctttgcatgactctgtttattttgatttt 7281783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 12329676 - 12329761
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcg-tttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||| |||||| |||| |||||||| |||||||| ||||||  | |||||| ||||| |||||||||    
T  12329676 aataagtgattt-cacatattttctgttttctttcgttttgtttttgtgatttcgtcgtctctgaacgactatgtttgttttgattt 12329761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 227
Target Start/End: Original strand, 30261805 - 30261887
Alignment:
Q  145 aaataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttga 227  Q
    ||||||||||||||||| | ||||  |||||| |||||||||||  ||||||| || ||  ||||||||||| || |||||||    
T  30261805 aaataagtgattttcactttttttttgttttctttcgtttgtttatgtgattttatagtaaagcacgactttattcattttga 30261887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 32779031 - 32778973
Alignment:
Q  145 aaataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgt 203  Q
    ||||||| ||||| ||||||||||| |||||| ||||||| |||| |||||||| ||||    
T  32779031 aaataagagatttccacatattttcagttttctttcgtttatttttgtgatttcgtcgt 32778973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 205
Target Start/End: Original strand, 11161941 - 11161990
Alignment:
Q  156 tttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct 205  Q
    |||||||| ||||| |||||| |||||||||||| |||||||| ||||||    
T  11161941 tttcacatcttttcagttttctttcgtttgtttttgtgatttcgtcgtct 11161990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 2025288 - 2025197
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtcta-gcacgactttgtttattttgatttttcgtct 237  Q
    |||||||||||| ||||| ||||| |||||  ||||||| |||| |||||||| ||||||  | |||| | ||||| ||||||||||||||||    
T  2025288 aataagtgattt-cacatgttttctgttttatttcgtttatttttgtgatttcgtcgtctctgaacgattctgtttgttttgatttttcgtct 2025197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 5e-34; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 122 - 231
Target Start/End: Original strand, 32301364 - 32301473
Alignment:
Q  122 attgttttatttctctattagcaaaataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgttta 221  Q
    ||||||| |||||||| ||||||||||||||||||||||||||| ||  || ||| |||||||||||| |||||||||||||||||||||||||||||||    
T  32301364 attgtttaatttctcttttagcaaaataagtgattttcacatatctttagtattctttcgtttgtttttgtgatttcatcgtctagcacgactttgttta 32301463  T
Q  222 ttttgatttt 231  Q
    |||| |||||    
T  32301464 ttttaatttt 32301473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 54 - 230
Target Start/End: Original strand, 18889031 - 18889209
Alignment:
Q  54 ttttcttcttcttgatctaccaaaaattggtgatttag-gtaaactttgacccaaaattacccct-tgagattgtttt-atttctctattagcaaaataa 150  Q
    ||||||||| ||| |||||||||| |  |||||||||| || || |||| || ||||| |||||| ||| |||||||| |||||||| ||||||||||||    
T  18889031 ttttcttctcctttatctaccaaagaggggtgatttagagtcaattttggccgaaaatcacccctctga-attgtttttatttctcttttagcaaaataa 18889129  T
Q  151 gtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgattt 230  Q
     ||||||||||||| ||||  ||||| ||| ||||||||||||||||||||||||||||  |||||||||||||||||||    
T  18889130 atgattttcacatactttcaattttctttcatttgttttggtgatttcatcgtctagcataactttgtttattttgattt 18889209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 47 - 231
Target Start/End: Original strand, 38783016 - 38783202
Alignment:
Q  47 tcacaacttttcttcttcttgatctaccaaaaattggtgattta-ggtaaactttgacccaaaattaccccttgagattgtttta-tttctctattagca 144  Q
    ||||||| ||||||||| |||||||||||||||  ||||||||| ||| || ||||| |  |||| |  | ||   ||||||||  ||||||| ||||      
T  38783016 tcacaacctttcttcttattgatctaccaaaaaggggtgatttaaggttaattttgatctgaaatcattcatttgaattgtttttctttctcttttagtt 38783115  T
Q  145 aaataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgatttt 231  Q
    |||||||||||||| |||||||||| ||||||||||||| ||||| |||||||| ||||| ||||| ||||||||||||||||||||    
T  38783116 aaataagtgattttaacatattttcagttttccttcgttcgtttttgtgatttcgtcgtccagcacaactttgtttattttgatttt 38783202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 145 - 237
Target Start/End: Complemental strand, 29551822 - 29551730
Alignment:
Q  145 aaataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgatttttcgtct 237  Q
    |||||| ||||||| |||||||||| ||| || || |||| |||| ||||||||  |||||||||||||||||||||||||||||||||||||    
T  29551822 aaataaatgattttgacatattttcagttatctttggtttatttttgtgatttcggcgtctagcacgactttgtttattttgatttttcgtct 29551730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 145 - 228
Target Start/End: Original strand, 34899029 - 34899112
Alignment:
Q  145 aaataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgat 228  Q
    ||||||||||||| |  |||||||| |||||| ||||| || ||| |||||||||| || ||||||||||||||||||||||||    
T  34899029 aaataagtgatttccgtatattttcagttttctttcgtatgattttgtgatttcattgtatagcacgactttgtttattttgat 34899112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 45750537 - 45750619
Alignment:
Q  156 tttcacatattttcggttttccttcgtttgttttggtgatttcatcgtc-tagcacgactttgtttattttgatttttcgtct 237  Q
    ||||||||||||| ||||||| |||||||||||| |||||||| ||||| | | |||||||||||| ||||||||| ||||||    
T  45750537 tttcacatatttttggttttctttcgtttgtttttgtgatttcgtcgtctttgaacgactttgtttgttttgatttatcgtct 45750619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 12871671 - 12871755
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtc-tagcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| |||||||| ||||| | |||||||| ||||| |||||||||    
T  12871671 aataagtgattt-cacatattttcagttttctttcgtttgtttttgtgatttcgtcgtctttgcacgactctgtttgttttgattt 12871755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 165 - 237
Target Start/End: Complemental strand, 50107967 - 50107895
Alignment:
Q  165 ttttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgatttttcgtct 237  Q
    ||||| |||||| |||||||||||| |||||||| ||||||  ||||| |||||||||||| |||||||||||    
T  50107967 ttttcagttttctttcgtttgtttttgtgatttcgtcgtctcacacgattttgtttattttaatttttcgtct 50107895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 28399394 - 28399336
Alignment:
Q  145 aaataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgt 203  Q
    ||||||||||||||||||||||||  |||||| |||||||||||| |||||||| ||||    
T  28399394 aaataagtgattttcacatatttttagttttctttcgtttgtttttgtgatttcgtcgt 28399336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 424362 - 424278
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| |||||||| ||||||  | |||||| ||||| |||||||||    
T  424362 aataagtgattt-cacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctgaacgactatgtttgttttgattt 424278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 20411623 - 20411714
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgatttttcgtct 237  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| | |||||||||||||    |||||| ||||| ||||||||| ||||||    
T  20411623 aataagtgattt-cacatattttctgttttctttcgtttgtttttgggatttcatcgtctctaaacgactctgtttgttttgatttctcgtct 20411714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 229
Target Start/End: Complemental strand, 29726667 - 29726584
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgatt 229  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| |||||||| ||||||  ||||||||  |||| ||||||||    
T  29726667 aataagtgattt-cacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctccgcacgactcggtttgttttgatt 29726584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 32784158 - 32784249
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgatttttcgtct 237  Q
    |||||||||||| ||||||||||| |||||| || ||||||||| |||||||| ||||||  | |||||| ||||| |||||||||| |||||    
T  32784158 aataagtgattt-cacatattttctgttttcttttgtttgtttttgtgatttcgtcgtctctgaacgactatgtttcttttgattttccgtct 32784249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 205
Target Start/End: Complemental strand, 4882430 - 4882372
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct 205  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| |||||||| ||||||    
T  4882430 aataagtgattt-cacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 4882372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 230
Target Start/End: Complemental strand, 15791333 - 15791262
Alignment:
Q  160 acatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||| |||||| |||||||||||| |||||||||||||||  | |||||| ||||| |||||||||    
T  15791333 acatattttctgttttctttcgtttgtttttgtgatttcatcgtctctgaacgactctgtttgttttgattt 15791262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 205
Target Start/End: Original strand, 27534749 - 27534807
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct 205  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| |||||||| ||||||    
T  27534749 aataagtgattt-cacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 27534807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 51418072 - 51418154
Alignment:
Q  156 tttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgatttttcgtct 237  Q
    |||||||||||||| |||||| |||||||||||| || ||||| ||||||  | |||||| ||||| |||||||||| |||||    
T  51418072 tttcacatattttctgttttctttcgtttgtttttgtaatttcgtcgtctctgaacgactctgtttgttttgattttccgtct 51418154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 205
Target Start/End: Original strand, 10627059 - 10627108
Alignment:
Q  156 tttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct 205  Q
    |||||||||||||| |||||| |||||||||||| |||||||| ||||||    
T  10627059 tttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 10627108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 237
Target Start/End: Original strand, 14265333 - 14265425
Alignment:
Q  145 aaataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgatttttcgtct 237  Q
    ||||||||||||| ||||||||||| |||||| | ||| |||||| |||||||| ||||||  | |||||| ||||| |||||||||| |||||    
T  14265333 aaataagtgattt-cacatattttctgttttcttacgtatgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgattttccgtct 14265425  T

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Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 15391323 - 15391239
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||| ||||| |||||| |||||||||||| |||||||| ||||||  | ||||||| |||| |||||||||    
T  15391323 aataagtgattt-cacatgttttctgttttctttcgtttgtttttgtgatttcgtcgtctctggacgacttcgtttgttttgattt 15391239  T

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Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 42490943 - 42491027
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||| ||| |||||| |||||||||||| |||||||| ||||||  | |||||| ||||| |||||||||    
T  42490943 aataagtgattt-cacatatcttcagttttctttcgtttgtttttgtgatttcgtcgtctctgtacgactctgtttgttttgattt 42491027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 44517197 - 44517281
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||| | |||| |||||||||||| |||||||| ||||||  | |||||| ||||| |||||||||    
T  44517197 aataagtgattt-cacatattttctgctttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgattt 44517281  T

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Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 31427167 - 31427107
Alignment:
Q  171 gttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgatttt 231  Q
    |||||| |||||||||||||||||||||||| | || | || ||||||||||||| |||||    
T  31427167 gttttctttcgtttgttttggtgatttcatcatataacgcgtctttgtttatttttatttt 31427107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 203
Target Start/End: Original strand, 3232847 - 3232894
Alignment:
Q  156 tttcacatattttcggttttccttcgtttgttttggtgatttcatcgt 203  Q
    |||||||||||||| |||||| |||||||||||| |||||||| ||||    
T  3232847 tttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgt 3232894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 43503871 - 43503957
Alignment:
Q  145 aaataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgatttt 231  Q
    ||||||||| ||||||||||||||| ||| || || |||| || || ||||||| || ||| ||||||||||||||| ||||||||||    
T  43503871 aaataagtgtttttcacatattttcagttatcttttgttttttatg-tgatttcttcatcttagcacgactttgtttcttttgatttt 43503957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 45425564 - 45425469
Alignment:
Q  126 ttttatttctctattagcaaaataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtc-tagcacgactttgttt 220  Q
    |||| ||||||| ||||  ||||||||||| | ||| |||||||  ||||| |||||| ||||| |||||||| ||||| |||||||||| |||||    
T  45425564 ttttctttctcttttagttaaataagtgatatccacgtattttcaattttctttcgttagtttttgtgatttcgtcgtcttagcacgactctgttt 45425469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 42 - 77
Target Start/End: Complemental strand, 50108118 - 50108083
Alignment:
Q  42 agtcatcacaacttttcttcttcttgatctaccaaa 77  Q
    ||||||||||||||||||| ||||||||||||||||    
T  50108118 agtcatcacaacttttctttttcttgatctaccaaa 50108083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 198
Target Start/End: Original strand, 18343673 - 18343715
Alignment:
Q  156 tttcacatattttcggttttccttcgtttgttttggtgatttc 198  Q
    |||||||||||||| |||||| |||||||||||| ||||||||    
T  18343673 tttcacatattttctgttttctttcgtttgtttttgtgatttc 18343715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 13488607 - 13488523
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    ||||||||||||| ||||||||||  ||||| |||||||||||| ||||||||  |||||  | |||||| ||||| |||||||||    
T  13488607 aataagtgatttt-acatattttctattttctttcgtttgtttttgtgatttcgccgtctctgaacgactctgtttgttttgattt 13488523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 226
Target Start/End: Complemental strand, 37822416 - 37822336
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttg 226  Q
    |||||||||||| |||||||||||  ||||| ||| |||||||| |||||||| ||||||  | |||||||||||| |||||    
T  37822416 aataagtgattt-cacatattttctattttctttcatttgtttttgtgatttcgtcgtctctgaacgactttgtttgttttg 37822336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 9298487 - 9298427
Alignment:
Q  145 aaataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct 205  Q
    |||||| |||||| ||| ||||||  |||||| |||||||||||| |||||||||| ||||    
T  9298487 aaataattgatttccacgtattttaagttttctttcgtttgtttttgtgatttcattgtct 9298427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 233
Target Start/End: Complemental strand, 15312646 - 15312593
Alignment:
Q  178 ttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgatttttc 233  Q
    ||||||||||||  | ||||| ||||||| ||||||||| ||||||||||||||||    
T  15312646 ttcgtttgtttt--ttatttcgtcgtctaacacgactttatttattttgatttttc 15312593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 28678201 - 28678110
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgt-ctagcacgactttgtttattttgatttttcgtct 237  Q
    |||||||||||| ||||||||||   ||||| |||||||||||| |||||||| ||||  | | |||||| ||||| ||||||||| ||||||    
T  28678201 aataagtgattt-cacatattttatattttctttcgtttgtttttgtgatttcgtcgtatttgaacgactctgtttgttttgatttctcgtct 28678110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 30678313 - 30678349
Alignment:
Q  154 attttcacatattttcggttttccttcgtttgttttg 190  Q
    |||||||||||||||| |||||| |||||||||||||    
T  30678313 attttcacatattttcagttttctttcgtttgttttg 30678349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 7e-33; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 126 - 236
Target Start/End: Complemental strand, 32408900 - 32408789
Alignment:
Q  126 ttttatttctctattagcaaaataagtgattttcacatat-tttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattt 224  Q
    |||| ||||||| |||| ||||||||||| |||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  32408900 ttttctttctcttttagaaaaataagtgactttcacatatctttcggttttcttttgtttgttttggtgatttcatcgtctagcacgactttgtttattt 32408801  T
Q  225 tgatttttcgtc 236  Q
    | |||| |||||    
T  32408800 tcatttctcgtc 32408789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 45 - 237
Target Start/End: Complemental strand, 5327658 - 5327465
Alignment:
Q  45 catcacaacttttcttcttcttgatctaccaaaaattggtgatttagg-taaactttgacccaaaattaccccttgagattgtttta-tttctctattag 142  Q
    ||||||||||||| ||||||||||||||||||| |  | |||| | || | || ||||||  ||||| ||||||  | ||||||||  ||||||| | ||    
T  5327658 catcacaactttt-ttcttcttgatctaccaaagagagatgatctggggttaattttgacttaaaatcacccctgcaaattgtttttctttctctttcag 5327560  T
Q  143 caaaataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgatttttcgtct 237  Q
      |||||||||||| ||||| |||||| |||||| |||||||||||| |||||||| | ||||||||| |||||||||||||||||||| |||||    
T  5327559 ttaaataagtgattatcacaaattttcagttttctttcgtttgtttttgtgatttcgttgtctagcacaactttgtttattttgattttccgtct 5327465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 145 - 231
Target Start/End: Original strand, 4219228 - 4219314
Alignment:
Q  145 aaataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgatttt 231  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||  ||||||| ||||||| ||||| |||||||||||| |||||    
T  4219228 aaataagtgattttcacatattttcagttttctttcgtttgtttttatgatttcgtcgtctaacacgattttgtttatttttatttt 4219314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 237
Target Start/End: Complemental strand, 106116 - 106023
Alignment:
Q  145 aaataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgatttttcgtct 237  Q
    ||||||||||||||||||||||||  |||||| |||||||||||| |||||||  ||||||  |||||||| |||||||||||||||| |||||    
T  106116 aaataagtgattttcacatatttttagttttctttcgtttgtttttgtgattttgtcgtctctgcacgactctgtttattttgattttccgtct 106023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 2147776 - 2147868
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgatttttcgtct 237  Q
    |||||||||||| ||||||||||| |||||| ||| |||||||| |||||||| ||||||  |||||||| ||||| ||||||||| ||||||    
T  2147776 aataagtgatttccacatattttcagttttctttcatttgtttttgtgatttcgtcgtctctgcacgactctgtttgttttgatttctcgtct 2147868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 145 - 240
Target Start/End: Complemental strand, 42168093 - 42167998
Alignment:
Q  145 aaataagtgatt-ttcacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgatttttcgtctctg 240  Q
    ||||| |||||| ||||| ||||||| | |||| |||||| |||||| ||||||  ||||||| |||||||||||||||||||||||||||||||||    
T  42168093 aaataggtgattattcacgtattttcagctttctttcgttggttttg-tgattttgtcgtctatcacgactttgtttattttgatttttcgtctctg 42167998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 54239097 - 54239013
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtcta-gcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| |||||||| ||||| | | |||||||||||| |||||||||    
T  54239097 aataagtgattt-cacatattttctgttttctttcgtttgtttttgtgatttcgtcgtcgatgaacgactttgtttgttttgattt 54239013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 48652519 - 48652428
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgatttttcgtct 237  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| |||||||| ||||||    |||||||||||| |||||||||| |||||    
T  48652519 aataagtgattt-cacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctaaacgactttgtttgttttgattttccgtct 48652428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 206
Target Start/End: Complemental strand, 34960937 - 34960878
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtcta 206  Q
    |||||||||||| ||||||||||  |||||| |||||||||||| ||||||||||||||||    
T  34960937 aataagtgattt-cacatattttatgttttctttcgtttgtttttgtgatttcatcgtcta 34960878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 205
Target Start/End: Complemental strand, 40013351 - 40013293
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct 205  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| |||||||| ||||||    
T  40013351 aataagtgattt-cacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 40013293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 204
Target Start/End: Complemental strand, 34103796 - 34103739
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtc 204  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| |||||||| |||||    
T  34103796 aataagtgattt-cacatattttctgttttctttcgtttgtttttgtgatttcgtcgtc 34103739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 230
Target Start/End: Complemental strand, 55090663 - 55090578
Alignment:
Q  145 aaataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    ||||||||||||| ||||||||||| |||||| ||| |||||||| |||||| | ||||||  | |||||||||||| |||||||||    
T  55090663 aaataagtgattt-cacatattttctgttttctttcatttgtttttgtgattccgtcgtctctgaacgactttgtttgttttgattt 55090578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 14585512 - 14585596
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||| |||||| || ||||||||| |||||||| ||||||  | |||||| ||||| |||||||||    
T  14585512 aataagtgattt-cacatattttctgttttcttttgtttgtttttgtgatttcctcgtctctgaacgactctgtttgttttgattt 14585596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 35174754 - 35174838
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||  |||||| |||||||||||| |||||||| ||||||  | |||||| ||||| |||||||||    
T  35174754 aataagtgattt-cacatattttttgttttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgattt 35174838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 36691878 - 36691794
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||| |||| | |||||||||||| |||||||| ||||||  | |||||| ||||| |||||||||    
T  36691878 aataagtgattt-cacatattttctgtttcctttcgtttgtttttgtgatttcgtcgtctctgaacgactatgtttgttttgattt 36691794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 11819133 - 11819224
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgatttttcgtct 237  Q
    |||||||||||| ||||||||||  |||||| ||| |||||||| |||||||| ||||||  | |||||| ||||| |||||||||| |||||    
T  11819133 aataagtgattt-cacatattttatgttttctttcatttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgattttccgtct 11819224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 33937483 - 33937416
Alignment:
Q  122 attgttttatttctctattagcaaaataagtgattttcacatattttcggttttccttcgtttgttttg 190  Q
    |||||||| ||| ||| |||| |||||||||||||||||| ||||||| | |||| |||||||||||||    
T  33937483 attgtttttttt-tcttttagtaaaataagtgattttcacgtattttcagctttctttcgtttgttttg 33937416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 36624774 - 36624715
Alignment:
Q  145 aaataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct 205  Q
    ||||||||||||| ||||||||||| |||||| || ||||||||| |||||||| ||||||    
T  36624774 aaataagtgattt-cacatattttctgttttcttttgtttgtttttgtgatttcgtcgtct 36624715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 32080824 - 32080749
Alignment:
Q  156 tttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||||| |||||| |||||||||||| |||||||  ||||||  | |||||| ||||| |||||||||    
T  32080824 tttcacatattttctgttttctttcgtttgtttttgtgattttgtcgtctctgaacgactctgtttgttttgattt 32080749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 230
Target Start/End: Original strand, 33637462 - 33637537
Alignment:
Q  156 tttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||||| |||||| ||||||| |||| |||||||| ||||||    |||||||||||| |||||||||    
T  33637462 tttcacatattttctgttttctttcgtttatttttgtgatttcgtcgtctctaaacgactttgtttgttttgattt 33637537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 205
Target Start/End: Complemental strand, 41868373 - 41868315
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct 205  Q
    |||||||||||| ||||||||||| |||||| |||||||| ||| |||||||| ||||||    
T  41868373 aataagtgattt-cacatattttctgttttctttcgtttgcttttgtgatttcgtcgtct 41868315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 205
Target Start/End: Original strand, 48400949 - 48401007
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct 205  Q
    |||||||||||| ||||||||||  |||||| |||||||||||| |||||||| ||||||    
T  48400949 aataagtgattt-cacatattttttgttttctttcgtttgtttttgtgatttcgtcgtct 48401007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 205
Target Start/End: Complemental strand, 49628166 - 49628108
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct 205  Q
    |||||||||||| ||||||||||  |||||| |||||||||||| |||||||| ||||||    
T  49628166 aataagtgattt-cacatattttttgttttctttcgtttgtttttgtgatttcgtcgtct 49628108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 230
Target Start/End: Original strand, 53402688 - 53402755
Alignment:
Q  164 attttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||| | |||| |||||||||||| |||||||||||||||  | |||||||||||| |||||||||    
T  53402688 attttctgctttctttcgtttgtttttgtgatttcatcgtctctgaacgactttgtttgttttgattt 53402755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 204
Target Start/End: Complemental strand, 13702051 - 13701994
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtc 204  Q
    |||||||||||| ||||||||||| |||||| ||| |||||||| |||||||| |||||    
T  13702051 aataagtgattt-cacatattttctgttttctttcatttgtttttgtgatttcgtcgtc 13701994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 3312493 - 3312577
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||  |||||| |||||||||||| || |||||||| |||  ||||||||  |||| |||||||||    
T  3312493 aataagtgattt-cacatattttaagttttctttcgtttgtttttgttatttcatcatctctgcacgactcagtttcttttgattt 3312577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 22485015 - 22485099
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtc-tagcacgactttgtttattttgattt 230  Q
    |||||||||||| | ||||||||| |||||| |||||||||||| |||||||| || || | | |||||| ||||| |||||||||    
T  22485015 aataagtgattt-cgcatattttctgttttctttcgtttgtttttgtgatttcgtcatctttgaacgactctgtttgttttgattt 22485099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 31270376 - 31270460
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||  |||||| |||||||||||| || ||||| ||||||  | |||||| ||||| |||||||||    
T  31270376 aataagtgattt-cacatattttatgttttctttcgtttgtttttgtaatttcgtcgtctctgaacgactctgtttgttttgattt 31270460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 237
Target Start/End: Complemental strand, 33605289 - 33605224
Alignment:
Q  172 ttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgatttttcgtct 237  Q
    ||||| || ||||||||| ||||||| ||| ||||  ||| |||||||||||||||||| ||||||    
T  33605289 ttttctttagtttgttttcgtgattttatcttctaaaacggctttgtttattttgatttctcgtct 33605224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 205
Target Start/End: Original strand, 38527322 - 38527371
Alignment:
Q  156 tttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct 205  Q
    |||||||||||||| |||||| ||||||||||||  ||||||| ||||||    
T  38527322 tttcacatattttctgttttctttcgtttgtttttatgatttcgtcgtct 38527371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 40883947 - 40883891
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgt 203  Q
    |||||||||||| ||| ||||||| |||||| |||||||||||| |||||||| ||||    
T  40883947 aataagtgattt-cacttattttctgttttctttcgtttgtttttgtgatttcgtcgt 40883891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 37451797 - 37451872
Alignment:
Q  155 ttttcacatattttcgg-ttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgattt 230  Q
    ||||||||||||||  | ||||| |||||| |||||| ||||||| ||||||| || ||||||||||| ||||||||    
T  37451797 ttttcacatatttttagcttttctttcgttggttttg-tgatttcgtcgtctaacatgactttgtttaatttgattt 37451872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 7e-27; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 145 - 230
Target Start/End: Original strand, 17792522 - 17792607
Alignment:
Q  145 aaataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgattt 230  Q
    ||||||| ||||||||||||||||| |||||| |||||||||||| |||||||| || ||||||||||||||||||||||||||||    
T  17792522 aaataagcgattttcacatattttcagttttctttcgtttgtttttgtgatttcgtcatctagcacgactttgtttattttgattt 17792607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 230
Target Start/End: Complemental strand, 11581294 - 11581116
Alignment:
Q  54 ttttcttcttcttgatctaccaaaaattggtgatttag-gtaaactttgacccaaaattaccccttgagattgtttta-tttctctattagcaaaataag 151  Q
    |||| ||||| ||||||||| ||| |  |||||||| | || || ||||||||||||| ||| |||   ||||||||  ||||||| || |  |||||||    
T  11581294 ttttattctttttgatctactaaagaagggtgatttggagttaattttgacccaaaataacctcttcgaattgtttttctttctctttttgttaaataag 11581195  T
Q  152 tgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgattt 230  Q
    ||||||||| |||||||  |||||| || ||||||||| |||||||| |||||||||||| ||||||||||||||||||    
T  11581194 tgattttcatatatttttagttttctttggtttgtttttgtgatttcgtcgtctagcacggctttgtttattttgattt 11581116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 148 - 230
Target Start/End: Complemental strand, 20607382 - 20607301
Alignment:
Q  148 taagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgattt 230  Q
    |||||||||||||||||||||| |||||| |||||||||||| |||||||| || ||||||||||||||| ||||||||||||    
T  20607382 taagtgattttcacatattttcagttttctttcgtttgtttttgtgatttcttcatctagcacgactttg-ttattttgattt 20607301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 126 - 230
Target Start/End: Complemental strand, 44150132 - 44150028
Alignment:
Q  126 ttttatttctctattagcaaaataagtgatttt-cacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattt 224  Q
    |||| ||||||||||||  |||||||||||||| ||||||||||  |||||| ||| || |||||| ||||||| | |||||||||| ||| ||||||||    
T  44150132 ttttctttctctattagttaaataagtgatttttcacatatttttagttttctttctttggttttg-tgatttcgttgtctagcacggcttagtttattt 44150034  T
Q  225 tgattt 230  Q
    ||||||    
T  44150033 tgattt 44150028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 237
Target Start/End: Complemental strand, 15028375 - 15028291
Alignment:
Q  153 gattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgatttttcgtct 237  Q
    ||||||||||||||||| || ||| ||||||||||||   |||||||||||||||| ||||| | ||||||||| ||| ||||||    
T  15028375 gattttcacatattttcagtcttctttcgtttgttttttcgatttcatcgtctagcgcgactctatttattttggtttatcgtct 15028291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 34416832 - 34416749
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||| |||||  || ||||||||| |||||||| |||||| | |||||||||||| |||||||||    
T  34416832 aataagtgattt-cacatattttcagtttttttttgtttgtttttgtgatttcgtcgtcttgaacgactttgtttgttttgattt 34416749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 40039335 - 40039289
Alignment:
Q  191 gtgatttcatcgtctagcacgactttgtttattttgatttttcgtct 237  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||    
T  40039335 gtgatttcatcgtctagcacgattttgtttattttgattttccgtct 40039289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 12704737 - 12704821
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| |||||||  ||||||  | |||||||||||| |||||||||    
T  12704737 aataagtgattt-cacatattttctgttttctttcgtttgtttttgtgattttgtcgtctctgaacgactttgtttgttttgattt 12704821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 231
Target Start/End: Complemental strand, 20598703 - 20598623
Alignment:
Q  150 agtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgatttt 231  Q
    ||||||| |||||||||||| |||||  | |||||||||| ||| |||| ||||||| |||||||||| |||||||||||||    
T  20598703 agtgattgtcacatattttcagttttattacgtttgtttttgtggtttcgtcgtctaccacgactttg-ttattttgatttt 20598623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 27095755 - 27095839
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||  |||||| |||||||||||| |||||||| ||||||  |||||||| ||||| |||||||||    
T  27095755 aataagtgattt-cacatattttttgttttctttcgtttgtttttgtgatttcgtcgtctctgcacgactctgtttgttttgattt 27095839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 31908887 - 31908803
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtc-tagcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||| |||||| ||||||||||||  ||||||| ||||| | | |||||||||||| |||||||||    
T  31908887 aataagtgattt-cacatattttctgttttctttcgtttgtttttctgatttcgtcgtctttgaacgactttgtttgttttgattt 31908803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 230
Target Start/End: Original strand, 32015273 - 32015357
Alignment:
Q  145 aaataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgattt 230  Q
    ||||||||||||| ||||||||||| |||||| ||| |||||||| |||||||| |||||| | || ||| ||||| |||||||||    
T  32015273 aaataagtgattt-cacatattttctgttttcattcatttgtttttgtgatttcgtcgtctcgaacaactctgtttgttttgattt 32015357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 38535376 - 38535292
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| |||||||| ||||||  | |||||| |||||||||| ||||    
T  38535376 aataagtgattt-cacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttatttttattt 38535292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 13740731 - 13740640
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgatttttcgtct 237  Q
    |||||||||||| || |||||||| |||||| |||||||||||| |||||||| || |||  | |||||||||||| |||||||||| |||||    
T  13740731 aataagtgattt-catatattttctgttttctttcgtttgtttttgtgatttcgtcatctccgaacgactttgtttgttttgattttccgtct 13740640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 9978731 - 9978656
Alignment:
Q  156 tttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||||| |||||| |||||||||||| |||||||| ||||||  | |||||| ||||| |||||||||    
T  9978731 tttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgattt 9978656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 205
Target Start/End: Complemental strand, 10287077 - 10287019
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct 205  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| |||||||| ||||||    
T  10287077 aataagtgattt-cacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 10287019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 20561194 - 20561119
Alignment:
Q  156 tttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||||| |||||| |||||||||||| |||||||| ||||||  | |||||| ||||| |||||||||    
T  20561194 tttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgattt 20561119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 230
Target Start/End: Original strand, 27666270 - 27666344
Alignment:
Q  155 ttttcacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgattt 230  Q
    |||||| |||||||| | |||| |||||| |||||| |||||| |||||||| ||||| |||||||||||||||||    
T  27666270 ttttcatatattttcagctttctttcgttggttttg-tgattttatcgtctaacacgattttgtttattttgattt 27666344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 205
Target Start/End: Complemental strand, 28231168 - 28231110
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct 205  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| |||||| ||||||||    
T  28231168 aataagtgattt-cacatattttctgttttctttcgtttgtttttgtgattccatcgtct 28231110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 6431460 - 6431402
Alignment:
Q  145 aaataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgt 203  Q
    ||||||||||||| ||||||||||| |||||| || ||||||||| |||||||| ||||    
T  6431460 aaataagtgatttccacatattttcagttttcttttgtttgtttttgtgatttcgtcgt 6431402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 7073009 - 7072935
Alignment:
Q  157 ttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||| |||||| |||||| |||||||||||| |||||||||||||||  | |||||| ||||| |||||||||    
T  7073009 ttcacaaattttctgttttctttcgtttgtttttgtgatttcatcgtctctgaacgactctgtttgttttgattt 7072935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 27665648 - 27665752
Alignment:
Q  126 ttttatttctctattagcaaaataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttatttt 225  Q
    |||||||||||| ||||  |||||||| ||||||||||| ||||    ||| |||||| ||||| |||||||  ||||||| |||||||||| |||||||    
T  27665648 ttttatttctcttttagttaaataagttattttcacatactttcaacattctttcgttggtttt-gtgattttgtcgtctaacacgactttg-ttatttt 27665745  T
Q  226 gattttt 232  Q
    |||||||    
T  27665746 gattttt 27665752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 129
Target Start/End: Complemental strand, 7582261 - 7582181
Alignment:
Q  49 acaacttttcttcttcttgatctaccaaaaattggtgattta-ggtaaactttgacccaaaattaccccttgagattgtttt 129  Q
    |||||||||||||||||||| ||||| ||||| ||||||||| ||| || |||||| | |||||||||||||  ||||||||    
T  7582261 acaacttttcttcttcttgacctaccgaaaatgggtgatttagggtcaattttgacac-aaattaccccttggaattgtttt 7582181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 25067902 - 25067986
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||| |||||| ||||||| |||| |||||||| ||||||  | |||||| ||||| |||||||||    
T  25067902 aataagtgattt-cacatattttctgttttctttcgtttctttttgtgatttcgtcgtctctgaacgactctgtttgttttgattt 25067986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 28261959 - 28261875
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||| |||||||| |||||||||| |||||| |||||||||||| |||||||| ||||||  | |||||| ||||| |||||||||    
T  28261959 aatatgtgatttt-acatattttctgttttctttcgtttgtttttgtgatttcttcgtctctgaacgactctgtttcttttgattt 28261875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 225
Target Start/End: Complemental strand, 15261504 - 15261405
Alignment:
Q  126 ttttatttctctattagcaaaataagtga-ttttcacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattt 224  Q
    |||| ||||||| ||||| |||||||||| |||| ||||| |||| |||||| |||| ||| ||| |||||||| | |||||||||||| ||| ||||||    
T  15261504 ttttctttctcttttagctaaataagtgattttttacataatttcagttttctttcg-ttgattttgtgatttcgttgtctagcacgacgttgattattt 15261406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 205
Target Start/End: Complemental strand, 17116475 - 17116415
Alignment:
Q  145 aaataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct 205  Q
    |||| |||||||||||||||||||| || ||| |||||||||||  |||||||| ||||||    
T  17116475 aaattagtgattttcacatattttcagtcttctttcgtttgtttatgtgatttcgtcgtct 17116415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 237
Target Start/End: Original strand, 38450286 - 38450378
Alignment:
Q  145 aaataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgatttttcgtct 237  Q
    |||||| |||||||||||||||||| ||| || |||  ||  ||| || ||||  || ||||||| |||||||||||||||||||| ||||||    
T  38450286 aaataaatgattttcacatattttcagttctctttcaattacttttgtaattttgtcatctagcaagactttgtttattttgatttatcgtct 38450378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 12891181 - 12891106
Alignment:
Q  156 tttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    ||||||||||||||  ||||| |||||||||||| |||||||| ||||||  | |||||| ||||| |||||||||    
T  12891181 tttcacatattttctattttctttcgtttgtttttgtgatttcgtcgtctcggaacgactctgtttgttttgattt 12891106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 205
Target Start/End: Original strand, 33012127 - 33012185
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct 205  Q
    |||||||||||| ||||||||||| |||||  |||||||||||| |||||||| ||||||    
T  33012127 aataagtgattt-cacatattttcagttttgtttcgtttgtttttgtgatttcgtcgtct 33012185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 230
Target Start/End: Original strand, 41797653 - 41797728
Alignment:
Q  156 tttcacatattttcggttttccttcgtttgttttggtgatttcatcgtc-tagcacgactttgtttattttgattt 230  Q
    ||||||||||| |  |||||| |||||||||||| |||||||| ||||| ||| |||||| ||||| |||||||||    
T  41797653 tttcacatattatatgttttctttcgtttgtttttgtgatttcgtcgtcttagaacgactctgtttgttttgattt 41797728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 205
Target Start/End: Complemental strand, 43474199 - 43474141
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct 205  Q
    |||||||||||| |||| |||||| |||||| |||||||||||| |||||||| ||||||    
T  43474199 aataagtgattt-cacaaattttctgttttctttcgtttgtttttgtgatttcgtcgtct 43474141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 17767624 - 17767566
Alignment:
Q  145 aaataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgt 203  Q
    ||||||||||||| ||||||||||| |||||| ||| |||| ||| |||||||| ||||    
T  17767624 aaataagtgatttccacatattttcagttttctttcatttgattttgtgatttcgtcgt 17767566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 32314501 - 32314583
Alignment:
Q  156 tttcacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacg-actttgtttattttgatttttcgtct 237  Q
    |||||||||||||| |||||| |||||||||||| |||||||  ||||||   ||| ||| ||||| ||||||||| ||||||    
T  32314501 tttcacatattttctgttttctttcgtttgtttttgtgattttgtcgtctctgacgaactctgtttgttttgatttctcgtct 32314583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 35333555 - 35333611
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgt 203  Q
    |||||||||||| ||||||||||| |||||| ||||||| |||| |||||||| ||||    
T  35333555 aataagtgattt-cacatattttctgttttctttcgtttatttttgtgatttcgtcgt 35333611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 233
Target Start/End: Complemental strand, 4604378 - 4604291
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgatttttc 233  Q
    |||||||||||| ||||||||||| | |||| |||| ||||||| |||||||| ||||||  | | |||| ||||| ||||||||||||    
T  4604378 aataagtgattt-cacatattttctgctttctttcgattgtttttgtgatttcgtcgtctctgaatgactctgtttgttttgatttttc 4604291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 6e-21; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 156 - 235
Target Start/End: Complemental strand, 31801292 - 31801213
Alignment:
Q  156 tttcacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgatttttcgt 235  Q
    |||||||||||||| |||||| || ||||||| | |||||||| ||||||||||||||||| ||||||||||||||||||    
T  31801292 tttcacatattttcagttttcttttgtttgttgttgtgatttcgtcgtctagcacgactttatttattttgatttttcgt 31801213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 126 - 230
Target Start/End: Complemental strand, 9044171 - 9044068
Alignment:
Q  126 ttttatttctctattagcaaaataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttatttt 225  Q
    |||| ||||||| |||||||| |||||||||||||||||||||| |||||  ||| |||||||| ||||||||  ||| ||||| |||||||| ||||||    
T  9044171 ttttgtttctcttttagcaaa-taagtgattttcacatattttcagtttttattcatttgtttttgtgatttcgccgtttagcatgactttgtctatttt 9044073  T
Q  226 gattt 230  Q
    |||||    
T  9044072 gattt 9044068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 145 - 237
Target Start/End: Original strand, 8508191 - 8508283
Alignment:
Q  145 aaataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgatttttcgtct 237  Q
    |||||||  |||||||||||||||   ||||| |||| ||||||| |||||||| ||||||| ||||||||||| ||||||||||| ||||||    
T  8508191 aaataagatattttcacatatttttaattttctttcgattgtttttgtgatttcgtcgtctaacacgactttgtgtattttgatttctcgtct 8508283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 12481441 - 12481357
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| |||||||| ||||||    |||||||||||| |||||||||    
T  12481441 aataagtgattt-cacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctaaacgactttgtttgttttgattt 12481357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 8978808 - 8978720
Alignment:
Q  149 aagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgatttttcgtct 237  Q
    ||||||||||||||||| ||   ||||  |||  || |||| |||||||| ||||||||||||||||||||||||||  ||||||||||    
T  8978808 aagtgattttcacatatctttaattttatttcaattatttttgtgatttcgtcgtctagcacgactttgtttattttagtttttcgtct 8978720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 205
Target Start/End: Complemental strand, 2304881 - 2304823
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct 205  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| |||||||| ||||||    
T  2304881 aataagtgattt-cacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 2304823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 19402870 - 19402795
Alignment:
Q  156 tttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||||| |||||| |||||||||||| |||||||| ||||||  | |||||| ||||| |||||||||    
T  19402870 tttcacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgattt 19402795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 4393829 - 4393911
Alignment:
Q  156 tttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgatttttcgtct 237  Q
    ||||||||||||||  ||||| |||||||||||| |||||||||| ||||  |||||| | ||||| ||||||||| ||||||    
T  4393829 tttcacatattttcttttttctttcgtttgtttttgtgatttcatggtctctgcacgattctgtttgttttgatttctcgtct 4393911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 15590150 - 15590066
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||| |||||| |||||||| ||| |||||||| ||||||  | |||||| ||||| |||||||||    
T  15590150 aataagtgattt-cacatattttctgttttctttcgtttgcttttgtgatttcgtcgtctctgaacgactctgtttgttttgattt 15590066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 230
Target Start/End: Complemental strand, 15470307 - 15470224
Alignment:
Q  145 aaataagtgatttt-cacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgattt 230  Q
    |||||||||||||| || ||||||||   |||| |||||||||||  |||||||||||||||| || | ||||||||||||||||||    
T  15470307 aaataagtgatttttcaaatattttcaaatttctttcgtttgttt--gtgatttcatcgtctaacatg-ctttgtttattttgattt 15470224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 35038748 - 35038835
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgatttttcgtct 237  Q
    ||||| |||||||||||||||||| |||||     ||||||||| ||||||   ||||||  ||||||||||||||||| |||||| |||||    
T  35038748 aataaatgattttcacatattttcagttttt----gtttgttttagtgattctctcgtctcacacgactttgtttatttagattttccgtct 35038835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 4921952 - 4921868
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||| |||||  |||||||||||| |||||||  ||||||  |||||||| | ||| |||||||||    
T  4921952 aataagtgattt-cacatattttcagttttatttcgtttgtttttgtgattttgtcgtctctgcacgactctatttgttttgattt 4921868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 8693728 - 8693644
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| || ||||  ||||||  | ||||||| |||| |||||||||    
T  8693728 aataagtgattt-cacatattttctgttttctttcgtttgtttttgtcattttgtcgtctctgaacgacttcgtttgttttgattt 8693644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 21507879 - 21507795
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||  |||||| |||||||||||| |||||||  ||||||    |||||||||||| |||||||||    
T  21507879 aataagtgattt-cacatattttttgttttctttcgtttgtttttgtgattttgtcgtctctaaacgactttgtttgttttgattt 21507795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 23654300 - 23654384
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||  |||||  |||||||||||| |||||||| ||||||  | |||||| ||||| |||||||||    
T  23654300 aataagtgattt-cacatattttttgttttatttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgattt 23654384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 237
Target Start/End: Original strand, 29284800 - 29284893
Alignment:
Q  145 aaataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtcta-gcacgactttgtttattttgatttttcgtct 237  Q
    |||||||||||||||||| ||||||  | |   ||  |||||||| |||||||| ||||||  |||||||||||||| ||||||||||| ||||    
T  29284800 aaataagtgattttcacacattttcaatatatttttatttgtttttgtgatttcgtcgtctttgcacgactttgtttgttttgattttttgtct 29284893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 2488188 - 2488279
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgatttttcgtct 237  Q
    |||||||||||| ||| |||||||  ||||| |||||||||||| || ||||| | ||||  |||||||| ||||| |||||||||| |||||    
T  2488188 aataagtgatttccacgtattttcatttttctttcgtttgtttt-gtaatttcgttgtctctgcacgactatgtttgttttgattttccgtct 2488279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 6e-21; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 131 - 230
Target Start/End: Original strand, 374317 - 374416
Alignment:
Q  131 tttctctattagcaaaataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgattt 230  Q
    ||||||| ||||  |||||| |||||||||| ||||||| |||||  || ||||||||| |||||||||| |||||||| ||||||||||||||||||||    
T  374317 tttctcttttagttaaataaatgattttcacgtattttcagttttattttgtttgtttttgtgatttcattgtctagcaagactttgtttattttgattt 374416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 233
Target Start/End: Complemental strand, 26240747 - 26240663
Alignment:
Q  149 aagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgatttttc 233  Q
    ||||||||||||||||||||| |||||| ||  |||||| | |||||||| ||||| | ||||||||||||||||||||||||||    
T  26240747 aagtgattttcacatattttcagttttcttttatttgttattgtgatttcgtcgtccaacacgactttgtttattttgatttttc 26240663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 14534959 - 14535032
Alignment:
Q  157 ttcacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgattt 230  Q
    ||||||||||||| |||||| |||||||||||| |||||||| | |||||||||| | ||||||||||||||||    
T  14534959 ttcacatattttcagttttctttcgtttgtttttgtgatttctttgtctagcacgtcattgtttattttgattt 14535032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 240
Target Start/End: Original strand, 25487656 - 25487752
Alignment:
Q  145 aaataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtc-tagcacgactttgtttattttgatttttcgtctctg 240  Q
    |||||||||||||||||||||||||  | ||| |||||||||||| |||||||| ||||| | | ||||||||  || |||||||||| ||||||||    
T  25487656 aaataagtgattttcacatattttcattgttctttcgtttgttttcgtgatttcgtcgtctttgtacgactttacttgttttgattttccgtctctg 25487752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 17331378 - 17331462
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| |||||||| ||||||  | |||||| ||||| |||||||||    
T  17331378 aataagtgattt-cacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgattt 17331462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 27241114 - 27241198
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtc-tagcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| || ||||| ||||| | | ||||| ||||||||||||||||    
T  27241114 aataagtgattt-cacatattttctgttttctttcgtttgtttttgtaatttcgtcgtctttgaacgaccttgtttattttgattt 27241198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 33164539 - 33164455
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| |||||||| ||||||  | |||||| ||||| |||||||||    
T  33164539 aataagtgattt-cacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgattt 33164455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 39179899 - 39179815
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| |||||||| ||||||  | |||||| ||||| |||||||||    
T  39179899 aataagtgattt-cacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgattt 39179815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 28040679 - 28040770
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgatttttcgtct 237  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| |||||||| ||||||  | |||||| ||||| |||| ||||| |||||    
T  28040679 aataagtgattt-cacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttaattttccgtct 28040770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 231
Target Start/End: Original strand, 6635300 - 6635385
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgatttt 231  Q
    |||||||||||| ||||||||||| |||||| || ||||||||| |||||||| ||||||  | |||||| ||||| ||||||||||    
T  6635300 aataagtgattt-cacatattttctgttttctttagtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgatttt 6635385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 178177 - 178091
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct---agcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||  |||||| |||||||||||| |||||||| ||||||    |||||||| ||||| |||||||||    
T  178177 aataagtgattt-cacatattttatgttttctttcgtttgtttttgtgatttcgtcgtctctgcgcacgactctgtttgttttgattt 178091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 12891726 - 12891810
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| |||||||| | ||||  |||||||| ||||| | |||||||    
T  12891726 aataagtgattt-cacatattttctgttttctttcgtttgtttttgtgatttcgttgtctctgcacgactctgtttgtattgattt 12891810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 29097839 - 29097923
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtc-tagcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||| |||||| || ||||||||| |||||||| ||||| | | |||||| ||||| |||||||||    
T  29097839 aataagtgattt-cacatattttctgttttctttagtttgtttttgtgatttcgtcgtctttgaacgactctgtttgttttgattt 29097923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 34431110 - 34431194
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtc-tagcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||| |||||| |||||||| ||| |||||||| ||||| | | |||||| ||||| |||||||||    
T  34431110 aataagtgattt-cacatattttctgttttctttcgtttgattttgtgatttcgtcgtctttgaacgactctgtttgttttgattt 34431194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 17096310 - 17096219
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgatttttcgtct 237  Q
    |||||||||||| ||||||||||| |||| | |||||||||||| |||||||  ||||||  | |||||| ||||| |||||||||| |||||    
T  17096310 aataagtgattt-cacatattttctgtttcctttcgtttgtttttgtgattttgtcgtctctgaacgactctgtttgttttgattttccgtct 17096219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 230
Target Start/End: Complemental strand, 17523641 - 17523510
Alignment:
Q  100 tgacccaaaattaccccttgagattgtttta-tttctctattagcaaaataagtgatttt-cacatattttcggttttccttcgtttgttttggtgattt 197  Q
    |||||||||||||||| ||   ||||||||  ||||||| ||||  |||||| ||||||| ||||||||| | | |||| |||||| ||||| |||||||    
T  17523641 tgacccaaaattacccattcgaattgtttttctttctcttttagttaaataaatgatttttcacatatttacagctttctttcgttggtttt-gtgattt 17523543  T
Q  198 catcgtctagcacgactttgtttattttgattt 230  Q
    | |||||||| || ||||| |||||||| ||||    
T  17523542 cgtcgtctagtacaactttatttattttaattt 17523510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 205
Target Start/End: Original strand, 3740407 - 3740465
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct 205  Q
    |||||||||||| ||||||||||| |||||| |||||||||||  |||||||| ||||||    
T  3740407 aataagtgattt-cacatattttctgttttctttcgtttgtttgtgtgatttcgtcgtct 3740465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 205
Target Start/End: Original strand, 6281094 - 6281152
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct 205  Q
    ||||||||||||| ||||||||||  ||||| |||||||||||| |||||||| ||||||    
T  6281094 aataagtgatttt-acatattttctattttctttcgtttgtttttgtgatttcgtcgtct 6281152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 230
Target Start/End: Original strand, 17687264 - 17687339
Alignment:
Q  156 tttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||||| |||||| || ||||||||| |||||||| | ||||  |||||||| ||||| |||||||||    
T  17687264 tttcacatattttcagttttcttttgtttgtttttgtgatttcgttgtctctgcacgactctgtttcttttgattt 17687339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 205
Target Start/End: Original strand, 17699603 - 17699661
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct 205  Q
    |||||||||||| ||||| ||||| |||||| |||||||||||| |||||||| ||||||    
T  17699603 aataagtgattt-cacatcttttctgttttctttcgtttgtttttgtgatttcgtcgtct 17699661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 230
Target Start/End: Original strand, 585860 - 585942
Alignment:
Q  149 aagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtc-tagcacgactttgtttattttgattt 230  Q
    |||||||||||||||||||||  | ||  |||||||||||| |||||||| ||||| | |||  ||||||||| |||||||||    
T  585860 aagtgattttcacatattttcaatcttatttcgtttgtttttgtgatttcgtcgtctttgcatcactttgtttgttttgattt 585942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 237
Target Start/End: Complemental strand, 42396574 - 42396492
Alignment:
Q  156 tttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgatttttcgtct 237  Q
    |||||||||||||  |||||| ||| |||||||| |||||||| ||||||  | |||| | ||||| ||||||||||||||||    
T  42396574 tttcacatattttttgttttctttcatttgtttttgtgatttcgtcgtctctgaacgaatctgtttgttttgatttttcgtct 42396492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 237
Target Start/End: Complemental strand, 17522925 - 17522833
Alignment:
Q  145 aaataagtgatttt-cacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgatttttcgtct 237  Q
    |||||||||||||| ||||||||| |   |||| |||||| |||||| ||||||| |||||||  || |||| |||||||||||||| ||||||    
T  17522925 aaataagtgatttttcacatatttccaactttctttcgttcgttttg-tgatttcgtcgtctaatacaacttcgtttattttgatttctcgtct 17522833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 230
Target Start/End: Original strand, 18653847 - 18653916
Alignment:
Q  162 atattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||| | |||| |||||||||||| |||||||| ||||||  |||||||| ||||| |||||||||    
T  18653847 atattttctgatttctttcgtttgtttttgtgatttcgtcgtctctgcacgactctgtttgttttgattt 18653916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 32347785 - 32347729
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgt 203  Q
    |||||||||||| ||||||||||| |||||  |||||||||||| |||||||| ||||    
T  32347785 aataagtgattt-cacatattttctgttttatttcgtttgtttttgtgatttcgtcgt 32347729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 20483236 - 20483327
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtc-tagcacgactttgtttattttgatttttcgtct 237  Q
    |||||||||||| ||||||||||| |||||  || ||||||||| |||||||| ||||| | | || ||| ||||| ||||||||| ||||||    
T  20483236 aataagtgattt-cacatattttctgttttgttttgtttgtttttgtgatttcgtcgtctttgaacaactctgtttgttttgatttatcgtct 20483327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 189
Target Start/End: Complemental strand, 26905711 - 26905667
Alignment:
Q  145 aaataagtgattttcacatattttcggttttccttcgtttgtttt 189  Q
    ||||||||||||| ||||||||||| || ||| ||||||||||||    
T  26905711 aaataagtgatttccacatattttcagtcttctttcgtttgtttt 26905667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 230
Target Start/End: Complemental strand, 39990247 - 39990162
Alignment:
Q  145 aaataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgattt 230  Q
    ||||| ||||||||||||||||||| |||||| |||||||||||| ||||| || | |||||||| || |||||||||||||||||    
T  39990247 aaataggtgattttcacatattttcagttttctttcgtttgttttcgtgatatcgttgtctagcatgattttgtttattttgattt 39990162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 43847120 - 43847204
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||  | |||||| |||||||||||||||    
T  43847120 aataagtgattt-cacatattttctgttttccttcgtttgttttggtgatttcgtcgtctctgaacgactctgtttattttgattt 43847204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 10094491 - 10094575
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtc-tagcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| |||||||| ||||| | | |||||||||||| |||||||||    
T  10094491 aataagtgattt-cacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctttgaacgactttgtttgttttgattt 10094575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 237
Target Start/End: Original strand, 14811270 - 14811362
Alignment:
Q  145 aaataagtgatttt-cacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgatttttcgtct 237  Q
    |||||||||||||| ||||||||| | | |||| |||||| |||||| ||||||| |||||||  ||||||||||||||||||||||| |||||    
T  14811270 aaataagtgatttttcacatatttccagctttctttcgttcgttttg-tgatttcgtcgtctaatacgactttgtttattttgattttccgtct 14811362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 145 - 237
Target Start/End: Original strand, 15258265 - 15258357
Alignment:
Q  145 aaataagtgatttt-cacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgatttttcgtct 237  Q
    |||||||||||||| ||||||||| | | |||| |||||| |||||| ||||||| |||||||  ||||||||||||||||||||||| |||||    
T  15258265 aaataagtgatttttcacatatttccagctttctttcgttcgttttg-tgatttcgtcgtctaatacgactttgtttattttgattttccgtct 15258357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 45457627 - 45457543
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||  |||||| |||||||||||| |||||||||||||||  | |||||||||||| |||||||||    
T  45457627 aataagtgattt-cacatattttatgttttctttcgtttgttttcgtgatttcatcgtctctgaacgactttgtttgttttgattt 45457543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 231
Target Start/End: Original strand, 26161039 - 26161115
Alignment:
Q  156 tttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgatttt 231  Q
    |||||||||||||| |||||| |||||||||||| |||||||||||||||  | |||||| ||||| ||||||||||    
T  26161039 tttcacatattttctgttttctttcgtttgtttttgtgatttcatcgtctctgaacgactctgtttgttttgatttt 26161115  T

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Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 237
Target Start/End: Complemental strand, 27705161 - 27705050
Alignment:
Q  126 ttttatttctctattagcaaaataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttatttt 225  Q
    |||| ||||||| ||||  |||||||||||||||| |||||||   || || |||||||| ||| |||||||  ||||||  | |||||||| |||||||    
T  27705161 ttttctttctcttttagtcaaataagtgattttcatatattttttattctctttcgtttgattttgtgattttgtcgtctcacgcgactttgcttatttt 27705062  T
Q  226 gatttttcgtct 237  Q
    ||||||||||||    
T  27705061 gatttttcgtct 27705050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 235
Target Start/End: Complemental strand, 43256641 - 43256532
Alignment:
Q  126 ttttatttctctattagcaaaataagtgattttcacata-ttttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattt 224  Q
    |||||||||||| ||||  |||||||||||| ||||||| ||||| ||||| ||||| ||||||| |||||||  | ||||| || |||||| |||||||    
T  43256641 ttttatttctcttttagttaaataagtgattatcacatatttttcagtttt-cttcgcttgtttttgtgattttgttgtctaacatgactttatttattt 43256543  T
Q  225 tgatttttcgt 235  Q
    |||||| ||||    
T  43256542 tgatttctcgt 43256532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 230
Target Start/End: Complemental strand, 6646655 - 6646578
Alignment:
Q  153 gattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgattt 230  Q
    ||||||||||||||||| |||||| |||||||| ||| |||||||| | ||||| ||| ||||  |||||||||||||    
T  6646655 gattttcacatattttcagttttctttcgtttgattttgtgatttcttagtctaacacaacttaatttattttgattt 6646578  T

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Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 230
Target Start/End: Original strand, 14810633 - 14810737
Alignment:
Q  126 ttttatttctctattagcaaaataagtga-ttttcacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattt 224  Q
    |||| ||||||| ||||  |||||||||| ||||||||||||| | | |||| |||||| ||||| |||||||| |||||||| |||||||| |||||||    
T  14810633 ttttctttctcttttagttaaataagtgatttttcacatatttacagctttctttcgttggtttt-gtgatttcgtcgtctagtacgactttatttattt 14810731  T
Q  225 tgattt 230  Q
    | ||||    
T  14810732 taattt 14810737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 230
Target Start/End: Original strand, 15257628 - 15257732
Alignment:
Q  126 ttttatttctctattagcaaaataagtga-ttttcacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattt 224  Q
    |||| ||||||| ||||  |||||||||| ||||||||||||| | | |||| |||||| ||||| |||||||| |||||||| |||||||| |||||||    
T  15257628 ttttctttctcttttagttaaataagtgatttttcacatatttacagctttctttcgttggtttt-gtgatttcgtcgtctagtacgactttatttattt 15257726  T
Q  225 tgattt 230  Q
    | ||||    
T  15257727 taattt 15257732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 24320294 - 24320210
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||  |||||| || ||||||||| |||||||||||||||  |||||||| ||||| |||||||||    
T  24320294 aataagtgattt-cacatattttttgttttcttttgtttgtttttgtgatttcatcgtctctgcacgactctgtttgttttgattt 24320210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 42603840 - 42603756
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtcta-gcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| |||||||| |||||||   |||||| ||||| |||||||||    
T  42603840 aataagtgattt-cacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctataaacgactctgtttgttttgattt 42603756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 1281208 - 1281117
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgatttttcgtct 237  Q
    |||||||||||| ||||||||||  |||||| |||||||||||| |||||||| ||||||  | |||||| ||||| ||||||||| ||||||    
T  1281208 aataagtgattt-cacatattttttgttttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgatttctcgtct 1281117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 235
Target Start/End: Original strand, 5237905 - 5238092
Alignment:
Q  50 caacttttcttcttcttgatctaccaaaaattggtgatttagg-taaactttgacccaaaattaccccttgagattgtttta-tttctctattagcaaaa 147  Q
    |||| ||| |||||||||||| |||||| |  ||||||||||| | || |||||| |||||| |||| |  | ||||||||  ||||||| ||||  |||    
T  5237905 caacatttattcttcttgatccaccaaagaggggtgatttagggtcaaatttgactcaaaatcacccttctaaattgttttgctttctcttttagttaaa 5238004  T
Q  148 taagtgatttt-cacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgatttttcgt 235  Q
    |||| |||||| |||||||||||  ||||| || ||| |||||  ||||||  | || |||||||||||||||||||||||||| ||||    
T  5238005 taagagatttttcacatattttcaattttcttttgttggttttt-tgattttgttgtttagcacgactttgtttattttgatttctcgt 5238092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 28664983 - 28664892
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgatttttcgtct 237  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| |||||||  ||||||  | |||||| ||||| |||||||||| |||||    
T  28664983 aataagtgattt-cacatattttctgttttctttcgtttgtttttgtgattttgtcgtctctgaacgactctgtttgttttgattttccgtct 28664892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 37714559 - 37714611
Alignment:
Q  178 ttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgattt 230  Q
    |||||||||||| |||||||| ||||||||||| ||| |||||||||||||||    
T  37714559 ttcgtttgtttttgtgatttcgtcgtctagcacaactatgtttattttgattt 37714611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 230
Target Start/End: Original strand, 10574444 - 10574515
Alignment:
Q  160 acatattttcggttttccttcgtttgttttggtgatttcatcgtc-tagcacgactttgtttattttgattt 230  Q
    |||||||||| |||||| |||||||||||| |||||||| ||||| | | |||||||||||| |||||||||    
T  10574444 acatattttctgttttctttcgtttgtttttgtgatttcgtcgtctttgaacgactttgtttgttttgattt 10574515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 230
Target Start/End: Original strand, 10623847 - 10623933
Alignment:
Q  144 aaaataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgattt 230  Q
    |||| ||||| || ||||||| ||||||||||| |||||||||||| ||| |||  || |||  ||| |||||||||||||||||||    
T  10623847 aaaaaaagtgtttctcacatagtttcggttttctttcgtttgtttttgtggtttagtcatctcacactactttgtttattttgattt 10623933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 198
Target Start/End: Complemental strand, 15674683 - 15674632
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttc 198  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| ||||||||    
T  15674683 aataagtgattt-cacatattttctgttttctttcgtttgtttttgtgatttc 15674632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 205
Target Start/End: Original strand, 11833069 - 11833127
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct 205  Q
    |||||||||||| ||||||||||| || ||| |||||||||||| |||||||| ||||||    
T  11833069 aataagtgattt-cacatattttctgtattctttcgtttgtttttgtgatttcgtcgtct 11833127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 29352294 - 29352345
Alignment:
Q  145 aaataagtgattttcacatattttcggttttccttcgtttgttttggtgatt 196  Q
    ||||||||||||| |||||||| || |||||| |||||||||||| ||||||    
T  29352294 aaataagtgatttccacatattctcagttttctttcgtttgttttcgtgatt 29352345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 235
Target Start/End: Complemental strand, 33476725 - 33476634
Alignment:
Q  145 aaataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtc-tagcacgactttgtttattttgatttttcgt 235  Q
    ||||||||||||| |||||||||||  ||||  | ||||||||||  ||||||| ||||| | |||||||||| ||| ||||||||| ||||    
T  33476725 aaataagtgatttccacatattttcaattttattccgtttgtttttatgatttcgtcgtctttgcacgactttttttgttttgatttctcgt 33476634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 51 - 118
Target Start/End: Complemental strand, 35306642 - 35306575
Alignment:
Q  51 aacttttcttcttcttgatctaccaaaaattggtgatttaggtaaactttgacccaaaattacccctt 118  Q
    ||||||| ||||||||||| | | | | |||||||||||||| ||| ||||| |||||||||||||||    
T  35306642 aacttttattcttcttgatatcctacagattggtgatttaggaaaattttgatccaaaattacccctt 35306575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 205
Target Start/End: Complemental strand, 39533046 - 39532988
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct 205  Q
    |||||||||||| ||||||||||| |||||| || ||||||||| |||||||| ||||||    
T  39533046 aataagtgattt-cacatattttctgttttcttttgtttgttttcgtgatttcgtcgtct 39532988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 237
Target Start/End: Complemental strand, 4621429 - 4621347
Alignment:
Q  156 tttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgatttttcgtct 237  Q
    ||||| || ||||| |||||| |||||||||||| |||||| |||| |||  |||||||| ||||| |||||||||| |||||    
T  4621429 tttcatatgttttcagttttctttcgtttgtttttgtgattccatcatctctgcacgactctgtttgttttgattttccgtct 4621347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 237
Target Start/End: Complemental strand, 36719606 - 36719532
Alignment:
Q  164 attttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgatttttcgtct 237  Q
    |||||| |||||| |||||||||||| |||||||| ||||||  | |||||| ||||| |||||||||| |||||    
T  36719606 attttctgttttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgattttccgtct 36719532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 203
Target Start/End: Original strand, 21990712 - 21990768
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgt 203  Q
    |||||||||||| ||||||| ||| |||||| |||||||||||| |||||||| ||||    
T  21990712 aataagtgattt-cacatatattctgttttctttcgtttgtttttgtgatttcgtcgt 21990768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 205
Target Start/End: Original strand, 32643071 - 32643120
Alignment:
Q  156 tttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct 205  Q
    |||||||||||||| |||||| || ||||||||| |||||||| ||||||    
T  32643071 tttcacatattttctgttttcttttgtttgtttttgtgatttcgtcgtct 32643120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 32740803 - 32740887
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||  |||||| ||||||  |||| |||||||| |||||| || |||||| ||||| |||||||||    
T  32740803 aataagtgattt-cacatattttttgttttctttcgttgatttttgtgatttcgtcgtctcagaacgactctgtttgttttgattt 32740887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 198
Target Start/End: Original strand, 5684415 - 5684466
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttc 198  Q
    |||||||||||| ||||||||||| |||||| |||||||| ||| ||||||||    
T  5684415 aataagtgattt-cacatattttctgttttctttcgtttgcttttgtgatttc 5684466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 198
Target Start/End: Original strand, 5709465 - 5709516
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttc 198  Q
    |||||||||||| ||||||||||| |||||| |||||||| ||| ||||||||    
T  5709465 aataagtgattt-cacatattttctgttttctttcgtttgcttttgtgatttc 5709516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 198
Target Start/End: Original strand, 42644726 - 42644777
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttc 198  Q
    |||||||||||| |||||||| || |||||| |||||||||||| ||||||||    
T  42644726 aataagtgattt-cacatattctctgttttctttcgtttgtttttgtgatttc 42644777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 1e-19; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 237
Target Start/End: Complemental strand, 12717190 - 12717097
Alignment:
Q  145 aaataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgatttttcgtct 237  Q
    ||||||||||||| ||||||||||| |||||| |||||||||||| |||||||| |||||| ||||||||| | ||| ||||||||| ||||||    
T  12717190 aaataagtgatttccacatattttcagttttctttcgtttgtttttgtgatttcttcgtctcagcacgactctatttgttttgatttctcgtct 12717097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 46829457 - 46829541
Alignment:
Q  146 aataagtgatttt-cacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgattt 230  Q
    ||||||||||||| |||||||||||   |||| |||||| ||||||| |||||| || ||||||||||||||||||||||||||||    
T  46829457 aataagtgatttttcacatattttcatctttctttcgttggttttgg-gatttcgtcctctagcacgactttgtttattttgattt 46829541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 8517527 - 8517436
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgatttttcgtct 237  Q
    ||||||||||||| |||||||||| |||||| |||||||||||| ||||||||  |||||  | |||||||||||| ||||||||| ||||||    
T  8517527 aataagtgatttt-acatattttctgttttctttcgtttgtttttgtgatttcgccgtctctgaacgactttgtttgttttgatttctcgtct 8517436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 238
Target Start/End: Original strand, 7060374 - 7060466
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtc-tagcacgactttgtttattttgatttttcgtctc 238  Q
    |||||||||||| ||||||||||  |||||| |||||||||||| |||||||| ||||| | | |||||| ||||| ||||||||| |||||||    
T  7060374 aataagtgattt-cacatattttatgttttctttcgtttgtttttgtgatttcgtcgtctttgaacgactctgtttcttttgatttctcgtctc 7060466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 24825699 - 24825783
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtc-tagcacgactttgtttattttgattt 230  Q
    |||||||||||| |||||||||||  ||||| |||||||||||| |||||||| ||||| | |||||||| ||||| |||||||||    
T  24825699 aataagtgattt-cacatattttctattttctttcgtttgtttttgtgatttcgtcgtctttgcacgactctgtttgttttgattt 24825783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 25658217 - 25658301
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||| |||||| ||||| |||||| |||||||| ||||||  | |||||||||||| |||||||||    
T  25658217 aataagtgattt-cacatattttctgttttctttcgtatgtttttgtgatttcgtcgtctctgaacgactttgtttgttttgattt 25658301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 30202088 - 30202172
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| |||||||| ||||||  | |||||| ||||| |||||||||    
T  30202088 aataagtgattt-cacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgattt 30202172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 237
Target Start/End: Original strand, 51958399 - 51958492
Alignment:
Q  145 aaataagtgattttcacatatttt-cggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgatttttcgtct 237  Q
    |||||||||||||| | ||||||| | |||||  ||||||| |||| ||||| || |||||| |||| |||||||||||||||||||| |||||    
T  51958399 aaataagtgatttttatatatttttcagttttatttcgtttatttttgtgatctcgtcgtctcgcacaactttgtttattttgattttccgtct 51958492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 145 - 205
Target Start/End: Original strand, 6882005 - 6882064
Alignment:
Q  145 aaataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct 205  Q
    ||||||||||||| ||||||||||| |||||| |||||||||||| |||||||| ||||||    
T  6882005 aaataagtgattt-cacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 6882064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 39837645 - 39837736
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtc-tagcacgactttgtttattttgatttttcgtct 237  Q
    |||||||||||| ||||||||||| |||||| ||||||||||||  ||||||| || || | | |||||||||||| |||||||||| |||||    
T  39837645 aataagtgattt-cacatattttctgttttctttcgtttgtttttttgatttcgtcatctttgaacgactttgtttgttttgattttccgtct 39837736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 44757113 - 44757022
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgatttttcgtct 237  Q
    |||||||||||| ||||||||||  |||||| ||||||||||||  ||||||| ||||||  ||| |||||||||| ||||||||| ||||||    
T  44757113 aataagtgattt-cacatattttatgttttctttcgtttgtttttatgatttcgtcgtctctgcatgactttgtttgttttgatttctcgtct 44757022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 230
Target Start/End: Original strand, 5814406 - 5814481
Alignment:
Q  156 tttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||||  |||||| |||||||||||| |||||||| ||||||  |||||||| ||||| |||||||||    
T  5814406 tttcacatatttttagttttctttcgtttgtttttgtgatttcgtcgtctctgcacgactctgtttgttttgattt 5814481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 205
Target Start/End: Original strand, 6911730 - 6911788
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct 205  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| |||||||| ||||||    
T  6911730 aataagtgattt-cacatattttctgttttctttcgtttgtttttgtgatttcttcgtct 6911788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 205
Target Start/End: Complemental strand, 29268848 - 29268790
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct 205  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| |||||||| ||||||    
T  29268848 aataagtgattt-cacatattttctgttttctttcgtttgtttttgtgatttcgtcgtct 29268790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 7083887 - 7083803
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||| |||||||||||  ||||| |||||||||||| |||||||| ||||||  | |||||| ||||| |||||||||    
T  7083887 aataagtgattt-cacatattttctattttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgattt 7083803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 22757144 - 22757228
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtcta-gcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||  |||||  |||||||||||| |||||||| ||||||| | |||||| ||||| |||||||||    
T  22757144 aataagtgattt-cacatattttatgttttttttcgtttgtttttgtgatttcgtcgtctatgaacgactctgtttgttttgattt 22757228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 26674422 - 26674506
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||  |||||| |||||||||||| |||||||| || |||  | |||||||||||| |||||||||    
T  26674422 aataagtgattt-cacatattttttgttttctttcgtttgtttttgtgatttcgtcatctctgaacgactttgtttgttttgattt 26674506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 189
Target Start/End: Original strand, 3159091 - 3159135
Alignment:
Q  145 aaataagtgattttcacatattttcggttttccttcgtttgtttt 189  Q
    ||||||||||||||||||||||||| | |||| ||||||||||||    
T  3159091 aaataagtgattttcacatattttcagctttctttcgtttgtttt 3159135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 11210384 - 11210293
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgatttttcgtct 237  Q
    |||||||||||| ||||||||| |  ||||| |||||||||||| |||||||| ||||||  | |||||| ||||| |||||||||| |||||    
T  11210384 aataagtgattt-cacatatttactcttttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgattttccgtct 11210293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 227
Target Start/End: Original strand, 24789250 - 24789321
Alignment:
Q  155 ttttcacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttga 227  Q
    ||||||||||||||| |||||  |||||| |||||| | ||||  ||||||| ||||||||||||||||||||    
T  24789250 ttttcacatattttcagttttttttcgttggttttg-taattttgtcgtctatcacgactttgtttattttga 24789321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 227
Target Start/End: Complemental strand, 24819009 - 24818938
Alignment:
Q  155 ttttcacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttga 227  Q
    ||||||||||||||| |||||  |||||| |||||| | ||||  ||||||| ||||||||||||||||||||    
T  24819009 ttttcacatattttcagttttttttcgttggttttg-taattttgtcgtctatcacgactttgtttattttga 24818938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 229
Target Start/End: Original strand, 50801267 - 50801350
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgatt 229  Q
    |||||||||||| ||||||||||| |||||| ||||||| |||| |||||||| ||||||  | |||||| ||||| ||||||||    
T  50801267 aataagtgattt-cacatattttctgttttctttcgtttatttttgtgatttcgtcgtctctgaacgactctgtttgttttgatt 50801350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 197
Target Start/End: Complemental strand, 26742534 - 26742484
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgattt 197  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| |||||||    
T  26742534 aataagtgattt-cacatattttctgttttctttcgtttgttttcgtgattt 26742484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 197
Target Start/End: Complemental strand, 43244452 - 43244402
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgattt 197  Q
    |||||||||||| |||||||||||| ||||| |||||||||||| |||||||    
T  43244452 aataagtgattt-cacatattttcgattttctttcgtttgtttttgtgattt 43244402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 205
Target Start/End: Complemental strand, 45351141 - 45351083
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct 205  Q
    |||||||||||| ||||||||||| |||||  |||||||||||| |||||||| ||||||    
T  45351141 aataagtgattt-cacatattttctgttttgtttcgtttgtttttgtgatttcgtcgtct 45351083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 205
Target Start/End: Complemental strand, 45360620 - 45360562
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct 205  Q
    |||||||||||| ||||||||||| |||||  |||||||||||| |||||||| ||||||    
T  45360620 aataagtgattt-cacatattttctgttttgtttcgtttgtttttgtgatttcgtcgtct 45360562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 237
Target Start/End: Original strand, 31932361 - 31932403
Alignment:
Q  195 tttcatcgtctagcacgactttgtttattttgatttttcgtct 237  Q
    |||| ||||| |||||||||||||||||||||||||| |||||    
T  31932361 tttcgtcgtccagcacgactttgtttattttgattttccgtct 31932403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 198
Target Start/End: Complemental strand, 626610 - 626569
Alignment:
Q  157 ttcacatattttcggttttccttcgtttgttttggtgatttc 198  Q
    ||||||||||||| |||||| |||||||||||| ||||||||    
T  626610 ttcacatattttctgttttctttcgtttgtttttgtgatttc 626569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 38944218 - 38944135
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||| |||||||||| | ||||| |||||||||||| |||||||| ||||||  | |||||| ||||| |||||||||    
T  38944218 aataagtgattt-cacatatttttg-ttttctttcgtttgtttttgtgatttcgtcgtctctgaacgactctgtttgttttgattt 38944135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 237
Target Start/End: Complemental strand, 24611870 - 24611779
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtcta-gcacgactttgtttattttgatttttcgtct 237  Q
    |||||||||||| |||||||||||  ||||  |||||||| ||| ||||||||  |||||  | |||||| ||||| ||||||||||||||||    
T  24611870 aataagtgattt-cacatattttctattttttttcgtttgcttttgtgatttcgacgtctctgaacgactctgtttgttttgatttttcgtct 24611779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 27090774 - 27090865
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgatttttcgtct 237  Q
    |||||||||||| ||| |||||||  ||||| |||||||||||| || ||||| | ||||  |||||||| ||||| |||||||||| |||||    
T  27090774 aataagtgatttccacgtattttcatttttctttcgtttgtttt-gtaatttcgttgtctctgcacgactatgtttgttttgattttccgtct 27090865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 1157 - 1073
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| |||||||| ||||||  |||||||| ||||| |||||||||    
T  1157 aataagtgattt-cacatattttcagttttctttcgtttgtttttgtgatttcgtcgtctctgcacgactctgtttgttttgattt 1073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0886 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 237
Target Start/End: Complemental strand, 3801 - 3721
Alignment:
Q  155 ttttcacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgatttttcgtct 237  Q
    ||||||||| ||||| |||||| |||||| |||||| ||||| | |||||||||| |||||||||||||||||||||| ||||    
T  3801 ttttcacat-ttttcagttttctttcgttggttttg-tgattgcgtcgtctagcatgactttgtttattttgattttttgtct 3721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 230
Target Start/End: Complemental strand, 4139 - 4054
Alignment:
Q  145 aaataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtc-tagcacgactttgtttattttgattt 230  Q
    ||||||||||||| ||||||||||  |||||| |||||||||||| |||||||| ||||| | | |||||||||||| |||||||||    
T  4139 aaataagtgattt-cacatattttatgttttctttcgtttgtttttgtgatttcgtcgtctttgaacgactttgtttgttttgattt 4054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 231
Target Start/End: Complemental strand, 15750 - 15666
Alignment:
Q  145 aaataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtctagcacgactttgtttattttgatttt 231  Q
    ||||||||||||| ||||| ||||| | |||| |||||| |||||| ||||||  |||||||||| |||||||||||||||||||||    
T  15750 aaataagtgatttccacat-ttttcagctttctttcgttggttttg-tgattttgtcgtctagcatgactttgtttattttgatttt 15666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 6187 - 6271
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct-agcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| |||||||| ||||||  | |||||| ||||| |||||||||    
T  6187 aataagtgattt-cacatattttctgttttctttcgtttgtttttgtgatttcgtcgtctctgaacgactatgtttgttttgattt 6271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 74214 - 74298
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtc-tagcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| |||||||  ||||| | | |||||||||||| |||||||||    
T  74214 aataagtgattt-cacatattttctgttttctttcgtttgtttttgtgattttttcgtctttgaacgactttgtttgttttgattt 74298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 146 - 206
Target Start/End: Complemental strand, 7195 - 7136
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtcta 206  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| |||||||| |||||||    
T  7195 aataagtgattt-cacatattttctgttttctttcgtttgtttttgtgatttcgtcgtcta 7136  T

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Target: scaffold0432 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 2488 - 2405
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtcta-gcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||| |||||| |||||||||||| |||||||| | ||||| | |||||| | |||||||||||||    
T  2488 aataagtgattt-cacatattttctgttttctttcgtttgtttt-gtgatttctttgtctatgaacgactctatttattttgattt 2405  T

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Target: scaffold1350 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 205
Target Start/End: Original strand, 1624 - 1682
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct 205  Q
    |||||||||||| ||||||||||  |||||| |||||||||||| |||||||| ||||||    
T  1624 aataagtgattt-cacatattttatgttttctttcgtttgtttttgtgatttcgtcgtct 1682  T

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Target: scaffold0001 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 146 - 205
Target Start/End: Complemental strand, 404329 - 404271
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtct 205  Q
    |||||||||||| ||||||||||| |||||| | |||||||||| |||||||| ||||||    
T  404329 aataagtgattt-cacatattttctgttttcttccgtttgtttttgtgatttcgtcgtct 404271  T

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Target: scaffold0536 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 146 - 230
Target Start/End: Original strand, 2952 - 3036
Alignment:
Q  146 aataagtgattttcacatattttcggttttccttcgtttgttttggtgatttcatcgtcta-gcacgactttgtttattttgattt 230  Q
    |||||||||||| ||||||||||| |||| | |||||||||||| |||||||  ||||||| | | |||| ||||| |||||||||    
T  2952 aataagtgattt-cacatattttctgtttcctttcgtttgtttttgtgattttgtcgtctatgaatgactctgtttgttttgattt 3036  T

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