View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10161_low_4 (Length: 564)

Name: NF10161_low_4
Description: NF10161
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10161_low_4
NF10161_low_4
[»] chr7 (66 HSPs)
chr7 (1-544)||(27073486-27074002)
chr7 (1-544)||(27204311-27204827)
chr7 (78-154)||(36574575-36574651)
chr7 (78-153)||(2361032-2361106)
chr7 (78-153)||(6432005-6432079)
chr7 (78-153)||(23565121-23565195)
chr7 (78-153)||(26417350-26417424)
chr7 (78-153)||(29608771-29608845)
chr7 (77-177)||(3904675-3904776)
chr7 (98-154)||(22328470-22328526)
chr7 (78-153)||(30024792-30024866)
chr7 (81-154)||(4253591-4253664)
chr7 (78-146)||(19502219-19502286)
chr7 (78-146)||(32358114-32358181)
chr7 (78-153)||(2759257-2759331)
chr7 (78-153)||(22270007-22270081)
chr7 (78-153)||(23555074-23555148)
chr7 (78-153)||(27347851-27347925)
chr7 (78-153)||(47674003-47674077)
chr7 (78-153)||(48491613-48491687)
chr7 (98-153)||(48599413-48599468)
chr7 (79-153)||(1113691-1113764)
chr7 (95-153)||(2390316-2390374)
chr7 (76-138)||(5116653-5116715)
chr7 (78-172)||(31518810-31518903)
chr7 (79-144)||(6360013-6360077)
chr7 (76-174)||(43363529-43363629)
chr7 (101-153)||(12097941-12097993)
chr7 (81-153)||(31733032-31733103)
chr7 (94-153)||(3259029-3259088)
chr7 (78-153)||(4508766-4508840)
chr7 (78-153)||(18126678-18126752)
chr7 (78-153)||(35853948-35854022)
chr7 (82-172)||(31105457-31105546)
chr7 (78-172)||(41649071-41649163)
chr7 (78-151)||(496043-496115)
chr7 (78-146)||(36146468-36146534)
chr7 (78-153)||(4510608-4510682)
chr7 (78-153)||(4512450-4512524)
chr7 (78-153)||(4586195-4586269)
chr7 (78-153)||(8153376-8153450)
chr7 (78-153)||(14069893-14069967)
chr7 (78-153)||(14379921-14379995)
chr7 (328-379)||(18396131-18396182)
chr7 (78-153)||(34310776-34310850)
chr7 (78-153)||(38671282-38671356)
chr7 (73-112)||(40808663-40808702)
chr7 (94-153)||(43864278-43864337)
chr7 (78-153)||(47676196-47676270)
chr7 (78-128)||(39731427-39731477)
chr7 (78-172)||(41317494-41317587)
chr7 (78-146)||(8359376-8359444)
chr7 (97-146)||(23344016-23344065)
chr7 (78-153)||(4178808-4178881)
chr7 (279-366)||(40808432-40808519)
chr7 (78-172)||(25615868-25615961)
chr7 (78-172)||(31518918-31519010)
chr7 (76-153)||(43504212-43504290)
chr7 (80-138)||(8452252-8452312)
chr7 (76-128)||(9432453-9432503)
chr7 (108-172)||(24525985-24526050)
chr7 (98-139)||(48489479-48489520)
chr7 (123-159)||(5514113-5514149)
chr7 (76-128)||(20128271-20128322)
chr7 (78-153)||(25767020-25767095)
chr7 (78-146)||(29991094-29991161)
[»] chr8 (60 HSPs)
chr8 (201-379)||(11712164-11712342)
chr8 (78-154)||(1292523-1292598)
chr8 (78-172)||(19491759-19491852)
chr8 (78-153)||(18655434-18655508)
chr8 (78-153)||(30143374-30143448)
chr8 (78-172)||(30291621-30291715)
chr8 (78-153)||(40221779-40221853)
chr8 (78-153)||(40321114-40321188)
chr8 (78-153)||(42435051-42435125)
chr8 (78-156)||(11712060-11712138)
chr8 (78-154)||(3303730-3303805)
chr8 (78-146)||(4283565-4283632)
chr8 (78-154)||(10240187-10240263)
chr8 (88-159)||(1822320-1822391)
chr8 (88-159)||(1856765-1856836)
chr8 (78-153)||(18141854-18141928)
chr8 (78-153)||(27811312-27811386)
chr8 (78-153)||(34256567-34256641)
chr8 (78-172)||(40328794-40328888)
chr8 (78-153)||(42498228-42498302)
chr8 (78-153)||(44353827-44353901)
chr8 (80-154)||(4162530-4162603)
chr8 (95-153)||(11384019-11384077)
chr8 (76-137)||(32902231-32902292)
chr8 (78-146)||(4731699-4731766)
chr8 (78-154)||(8965751-8965826)
chr8 (81-153)||(12702697-12702768)
chr8 (81-153)||(15212820-15212891)
chr8 (78-153)||(17982687-17982761)
chr8 (78-153)||(18106139-18106212)
chr8 (78-153)||(33352184-33352258)
chr8 (78-153)||(34254391-34254465)
chr8 (78-153)||(43036457-43036531)
chr8 (78-156)||(7597645-7597723)
chr8 (201-315)||(41266860-41266974)
chr8 (76-173)||(41266982-41267080)
chr8 (89-154)||(3231866-3231931)
chr8 (95-172)||(3772207-3772284)
chr8 (78-153)||(1746279-1746352)
chr8 (78-146)||(5689312-5689379)
chr8 (110-154)||(10929832-10929876)
chr8 (78-153)||(1345431-1345505)
chr8 (279-374)||(7597436-7597530)
chr8 (78-153)||(9765779-9765853)
chr8 (99-146)||(10015122-10015169)
chr8 (78-153)||(31218291-31218365)
chr8 (76-142)||(30909413-30909477)
chr8 (98-172)||(41364926-41365000)
chr8 (328-377)||(32902475-32902524)
chr8 (78-146)||(10930259-10930326)
chr8 (79-138)||(8153807-8153865)
chr8 (78-153)||(44303889-44303963)
chr8 (94-139)||(11137073-11137118)
chr8 (201-374)||(29796485-29796656)
chr8 (76-128)||(40873713-40873763)
chr8 (76-124)||(3899192-3899240)
chr8 (78-154)||(6599005-6599080)
chr8 (78-154)||(6674458-6674533)
chr8 (78-153)||(19945419-19945494)
chr8 (79-146)||(40585754-40585822)
[»] chr3 (70 HSPs)
chr3 (78-172)||(32891118-32891212)
chr3 (78-154)||(35138765-35138841)
chr3 (78-153)||(7762299-7762373)
chr3 (78-153)||(34491246-34491320)
chr3 (81-142)||(20937701-20937762)
chr3 (78-153)||(4569986-4570060)
chr3 (78-153)||(7764498-7764572)
chr3 (95-153)||(36018886-36018945)
chr3 (78-172)||(46173372-46173465)
chr3 (78-172)||(46860489-46860582)
chr3 (90-154)||(5433947-5434011)
chr3 (78-154)||(32744496-32744571)
chr3 (78-153)||(49199529-49199604)
chr3 (78-153)||(29810902-29810976)
chr3 (78-153)||(30236159-30236233)
chr3 (79-138)||(40519258-40519316)
chr3 (78-177)||(45095173-45095271)
chr3 (78-153)||(51398848-51398922)
chr3 (78-153)||(54593738-54593812)
chr3 (76-138)||(8166514-8166576)
chr3 (78-172)||(22835062-22835155)
chr3 (95-153)||(31340277-31340335)
chr3 (78-172)||(39153421-39153514)
chr3 (78-155)||(9666526-9666602)
chr3 (81-153)||(5236519-5236590)
chr3 (78-174)||(9581295-9581390)
chr3 (78-153)||(43401861-43401936)
chr3 (78-154)||(54739013-54739088)
chr3 (78-153)||(6095659-6095733)
chr3 (78-153)||(19683949-19684023)
chr3 (78-153)||(31314479-31314553)
chr3 (78-153)||(37408492-37408566)
chr3 (78-153)||(40734532-40734606)
chr3 (78-153)||(40735417-40735491)
chr3 (78-153)||(44331579-44331653)
chr3 (78-153)||(44700538-44700612)
chr3 (78-153)||(47304285-47304359)
chr3 (78-152)||(760882-760955)
chr3 (88-154)||(5373266-5373332)
chr3 (76-154)||(25491025-25491103)
chr3 (78-172)||(53921563-53921656)
chr3 (76-153)||(23200196-23200272)
chr3 (98-151)||(28253346-28253399)
chr3 (78-154)||(23391969-23392044)
chr3 (78-154)||(29196446-29196521)
chr3 (78-154)||(29682392-29682467)
chr3 (78-153)||(43403804-43403879)
chr3 (76-139)||(2020187-2020250)
chr3 (78-132)||(4055823-4055878)
chr3 (78-153)||(5258204-5258278)
chr3 (78-153)||(5260383-5260457)
chr3 (78-153)||(29813097-29813171)
chr3 (81-159)||(1313867-1313945)
chr3 (76-146)||(23197997-23198066)
chr3 (76-138)||(26323131-26323193)
chr3 (78-159)||(33191860-33191939)
chr3 (274-374)||(2075304-2075403)
chr3 (78-146)||(16499070-16499137)
chr3 (77-137)||(41510312-41510372)
chr3 (98-142)||(50432733-50432777)
chr3 (78-132)||(4075530-4075585)
chr3 (78-153)||(9636186-9636260)
chr3 (95-154)||(51352187-51352245)
chr3 (76-138)||(24635306-24635368)
chr3 (78-128)||(40913352-40913401)
chr3 (81-154)||(39127580-39127653)
chr3 (297-374)||(40519455-40519532)
chr3 (78-153)||(801124-801200)
chr3 (274-374)||(2019981-2020080)
chr3 (95-146)||(41819598-41819650)
[»] chr4 (73 HSPs)
chr4 (88-154)||(26699512-26699578)
chr4 (201-370)||(6677306-6677474)
chr4 (40-172)||(5349925-5350057)
chr4 (91-142)||(34788847-34788898)
chr4 (78-153)||(46147451-46147525)
chr4 (78-172)||(12073407-12073500)
chr4 (78-172)||(24969127-24969220)
chr4 (78-159)||(12119567-12119648)
chr4 (78-154)||(4587992-4588067)
chr4 (78-146)||(48893698-48893765)
chr4 (78-146)||(50673907-50673974)
chr4 (78-153)||(6655990-6656064)
chr4 (78-153)||(27417025-27417099)
chr4 (78-153)||(56178697-56178771)
chr4 (76-142)||(34112862-34112928)
chr4 (79-153)||(50262762-50262835)
chr4 (81-154)||(48142440-48142513)
chr4 (76-153)||(54199964-54200040)
chr4 (78-154)||(6542239-6542314)
chr4 (78-146)||(54883061-54883128)
chr4 (78-153)||(8665442-8665516)
chr4 (78-153)||(9927518-9927592)
chr4 (78-153)||(26175696-26175770)
chr4 (78-153)||(26364270-26364344)
chr4 (90-177)||(32091488-32091575)
chr4 (78-153)||(35662475-35662549)
chr4 (78-153)||(36994558-36994632)
chr4 (78-153)||(37740659-37740733)
chr4 (78-153)||(40632479-40632553)
chr4 (78-172)||(379395-379488)
chr4 (79-153)||(31474185-31474258)
chr4 (78-152)||(36463449-36463522)
chr4 (80-142)||(44570427-44570489)
chr4 (78-146)||(2209754-2209822)
chr4 (81-142)||(6677514-6677575)
chr4 (78-143)||(29254538-29254602)
chr4 (78-138)||(22882810-22882870)
chr4 (78-138)||(22934474-22934534)
chr4 (78-138)||(33989893-33989953)
chr4 (78-153)||(34570474-34570548)
chr4 (78-153)||(48143077-48143151)
chr4 (78-144)||(5429722-5429787)
chr4 (78-156)||(45687242-45687319)
chr4 (88-146)||(53345258-53345316)
chr4 (95-172)||(52467430-52467507)
chr4 (96-153)||(55085442-55085499)
chr4 (81-153)||(8648173-8648244)
chr4 (78-142)||(33089923-33089987)
chr4 (95-139)||(40975085-40975129)
chr4 (78-153)||(46703534-46703609)
chr4 (78-153)||(12743985-12744059)
chr4 (78-153)||(12744107-12744181)
chr4 (78-153)||(12745374-12745448)
chr4 (201-363)||(23042952-23043115)
chr4 (83-177)||(44967894-44967988)
chr4 (78-153)||(47038471-47038544)
chr4 (78-128)||(5370143-5370192)
chr4 (100-153)||(21688283-21688336)
chr4 (279-379)||(21704067-21704168)
chr4 (81-142)||(22628955-22629018)
chr4 (78-153)||(41964449-41964524)
chr4 (78-153)||(12745496-12745570)
chr4 (78-153)||(13992353-13992426)
chr4 (78-141)||(21703895-21703958)
chr4 (78-153)||(29999866-29999941)
chr4 (78-153)||(41639460-41639534)
chr4 (73-128)||(41961476-41961531)
chr4 (297-376)||(43208129-43208207)
chr4 (78-153)||(52095422-52095496)
chr4 (78-172)||(5871835-5871928)
chr4 (76-138)||(6199930-6199994)
chr4 (79-138)||(1122876-1122936)
chr4 (297-379)||(53345043-53345127)
[»] chr6 (32 HSPs)
chr6 (78-167)||(603148-603236)
chr6 (79-154)||(5043660-5043734)
chr6 (78-177)||(26954346-26954444)
chr6 (78-172)||(2972999-2973092)
chr6 (78-153)||(17758057-17758131)
chr6 (78-153)||(21588965-21589039)
chr6 (78-153)||(21593698-21593772)
chr6 (78-177)||(4045432-4045532)
chr6 (81-168)||(186733-186820)
chr6 (78-177)||(5406260-5406358)
chr6 (78-177)||(5410585-5410683)
chr6 (78-153)||(17763024-17763098)
chr6 (78-153)||(26830183-26830257)
chr6 (78-177)||(31404735-31404833)
chr6 (78-172)||(3038963-3039056)
chr6 (95-153)||(33211261-33211319)
chr6 (78-153)||(3808768-3808843)
chr6 (78-153)||(9183091-9183165)
chr6 (78-153)||(28137468-28137542)
chr6 (82-153)||(33160416-33160486)
chr6 (78-144)||(25073611-25073677)
chr6 (78-142)||(2908503-2908567)
chr6 (78-153)||(5413454-5413528)
chr6 (78-153)||(30834596-30834670)
chr6 (76-177)||(3072817-3072919)
chr6 (95-144)||(26800630-26800680)
chr6 (95-153)||(22424901-22424961)
chr6 (78-153)||(2171592-2171665)
chr6 (115-172)||(16569048-16569106)
chr6 (91-128)||(12221176-12221213)
chr6 (106-138)||(27106178-27106210)
chr6 (106-138)||(27147984-27148016)
[»] chr2 (53 HSPs)
chr2 (81-154)||(24398090-24398163)
chr2 (78-153)||(36773596-36773670)
chr2 (78-172)||(2334478-2334571)
chr2 (80-154)||(33648204-33648278)
chr2 (76-142)||(42261543-42261609)
chr2 (78-155)||(17490208-17490284)
chr2 (78-153)||(6595066-6595140)
chr2 (76-168)||(41454253-41454345)
chr2 (78-153)||(1631792-1631866)
chr2 (78-141)||(7815333-7815395)
chr2 (40-138)||(12123605-12123704)
chr2 (78-153)||(33162510-33162584)
chr2 (75-142)||(34811278-34811345)
chr2 (78-153)||(45726963-45727037)
chr2 (78-172)||(11690516-11690609)
chr2 (78-172)||(35446944-35447037)
chr2 (78-172)||(42362367-42362460)
chr2 (78-167)||(723804-723892)
chr2 (40-156)||(7597031-7597148)
chr2 (78-153)||(4503193-4503266)
chr2 (78-176)||(13121779-13121875)
chr2 (78-154)||(26353217-26353292)
chr2 (76-141)||(42019928-42019995)
chr2 (78-153)||(45099789-45099862)
chr2 (78-141)||(17057429-17057491)
chr2 (78-141)||(17085412-17085474)
chr2 (78-153)||(30833379-30833454)
chr2 (78-153)||(36318069-36318143)
chr2 (78-145)||(36988136-36988202)
chr2 (78-172)||(11151651-11151744)
chr2 (76-154)||(41446172-41446250)
chr2 (76-138)||(36282973-36283037)
chr2 (79-146)||(11049594-11049661)
chr2 (78-142)||(30218104-30218168)
chr2 (78-153)||(4484390-4484465)
chr2 (78-153)||(5723316-5723390)
chr2 (78-153)||(29867903-29867977)
chr2 (98-153)||(36205743-36205798)
chr2 (78-153)||(38312274-38312348)
chr2 (76-138)||(4561137-4561199)
chr2 (79-153)||(32289597-32289671)
chr2 (95-153)||(42288186-42288244)
chr2 (78-139)||(7451166-7451226)
chr2 (95-172)||(11067320-11067397)
chr2 (78-153)||(14633885-14633960)
chr2 (78-153)||(34139830-34139905)
chr2 (78-136)||(3897041-3897099)
chr2 (201-287)||(28671849-28671935)
chr2 (113-154)||(14202499-14202540)
chr2 (328-365)||(28671797-28671834)
chr2 (94-135)||(43406022-43406063)
chr2 (78-126)||(19401318-19401366)
chr2 (106-154)||(24885694-24885742)
[»] scaffold0053 (1 HSPs)
scaffold0053 (76-175)||(25065-25164)
[»] chr1 (68 HSPs)
chr1 (78-139)||(9109479-9109540)
chr1 (37-135)||(41135872-41135971)
chr1 (78-172)||(196968-197061)
chr1 (76-138)||(25652135-25652197)
chr1 (78-172)||(41360929-41361022)
chr1 (78-172)||(42298035-42298128)
chr1 (81-154)||(22079349-22079422)
chr1 (78-142)||(6808497-6808561)
chr1 (78-153)||(28265614-28265688)
chr1 (78-153)||(47255400-47255474)
chr1 (78-172)||(8550847-8550940)
chr1 (95-153)||(10925257-10925315)
chr1 (78-172)||(11348713-11348806)
chr1 (78-152)||(31925767-31925840)
chr1 (94-154)||(928051-928111)
chr1 (90-154)||(3460729-3460793)
chr1 (79-171)||(4535541-4535633)
chr1 (78-154)||(15820340-15820415)
chr1 (78-153)||(3156899-3156973)
chr1 (78-153)||(3189364-3189438)
chr1 (78-153)||(3198181-3198255)
chr1 (78-153)||(3207020-3207094)
chr1 (78-153)||(13547149-13547223)
chr1 (78-153)||(19754529-19754603)
chr1 (78-153)||(28220286-28220360)
chr1 (78-153)||(49918384-49918458)
chr1 (76-142)||(1050501-1050567)
chr1 (78-144)||(2263034-2263100)
chr1 (76-153)||(7482288-7482365)
chr1 (78-152)||(31659273-31659346)
chr1 (88-154)||(37282761-37282827)
chr1 (76-153)||(37559926-37560003)
chr1 (78-156)||(45644414-45644491)
chr1 (78-153)||(37168331-37168406)
chr1 (78-154)||(46064951-46065026)
chr1 (78-141)||(193657-193719)
chr1 (78-153)||(834227-834301)
chr1 (81-172)||(4552700-4552790)
chr1 (76-142)||(16914232-16914299)
chr1 (78-153)||(23555325-23555399)
chr1 (78-137)||(32471510-32471569)
chr1 (78-153)||(44455194-44455268)
chr1 (94-172)||(47115186-47115265)
chr1 (78-153)||(50169270-50169344)
chr1 (78-144)||(16455664-16455729)
chr1 (78-151)||(13138036-13138108)
chr1 (80-153)||(19752720-19752792)
chr1 (78-139)||(28223481-28223541)
chr1 (81-154)||(40122261-40122333)
chr1 (78-153)||(37033132-37033207)
chr1 (78-146)||(50167235-50167302)
chr1 (71-174)||(12318575-12318678)
chr1 (78-153)||(13316412-13316486)
chr1 (78-153)||(13549060-13549134)
chr1 (78-153)||(20762706-20762780)
chr1 (82-153)||(29136281-29136351)
chr1 (76-140)||(1485827-1485892)
chr1 (78-135)||(1833574-1833630)
chr1 (78-153)||(37503617-37503688)
chr1 (78-146)||(13659396-13659463)
chr1 (80-136)||(28317685-28317740)
chr1 (81-153)||(30476509-30476580)
chr1 (82-153)||(34603610-34603681)
chr1 (79-137)||(5459956-5460013)
chr1 (106-172)||(36683705-36683771)
chr1 (115-153)||(37879007-37879045)
chr1 (82-128)||(38746780-38746828)
chr1 (94-159)||(44650238-44650303)
[»] chr5 (50 HSPs)
chr5 (78-154)||(13695750-13695826)
chr5 (73-142)||(35616214-35616283)
chr5 (78-146)||(13239792-13239859)
chr5 (78-146)||(42309995-42310062)
chr5 (78-153)||(28278350-28278424)
chr5 (71-154)||(30802861-30802944)
chr5 (78-153)||(37439175-37439249)
chr5 (78-153)||(40147295-40147369)
chr5 (81-167)||(316782-316868)
chr5 (76-138)||(32609584-32609646)
chr5 (78-172)||(33831695-33831788)
chr5 (78-153)||(213499-213573)
chr5 (79-146)||(538066-538132)
chr5 (78-153)||(13488237-13488311)
chr5 (78-153)||(39468609-39468683)
chr5 (80-153)||(38747039-38747111)
chr5 (78-146)||(533810-533877)
chr5 (76-172)||(3075716-3075811)
chr5 (78-146)||(9049402-9049469)
chr5 (78-154)||(16452113-16452188)
chr5 (78-146)||(42428490-42428557)
chr5 (88-167)||(3325933-3326012)
chr5 (95-154)||(16641013-16641072)
chr5 (78-153)||(25412794-25412868)
chr5 (79-142)||(33906091-33906154)
chr5 (78-154)||(8566006-8566081)
chr5 (78-138)||(10054876-10054935)
chr5 (95-151)||(30683000-30683056)
chr5 (78-153)||(36074103-36074176)
chr5 (95-143)||(42926911-42926959)
chr5 (78-145)||(5058087-5058153)
chr5 (79-138)||(8445764-8445823)
chr5 (78-153)||(9789284-9789359)
chr5 (78-153)||(16409508-16409583)
chr5 (78-153)||(18441708-18441783)
chr5 (78-153)||(26177915-26177990)
chr5 (78-153)||(32636858-32636932)
chr5 (78-153)||(42426295-42426369)
chr5 (76-142)||(32579269-32579335)
chr5 (76-138)||(32583340-32583402)
chr5 (78-153)||(13343095-13343168)
chr5 (78-138)||(28750715-28750774)
chr5 (76-128)||(30793195-30793247)
chr5 (81-153)||(31183006-31183076)
chr5 (95-154)||(5887492-5887551)
chr5 (76-167)||(10700706-10700796)
chr5 (78-153)||(30182622-30182696)
chr5 (78-138)||(22097913-22097971)
chr5 (95-138)||(2149233-2149277)
chr5 (76-112)||(5007806-5007842)
[»] scaffold0176 (1 HSPs)
scaffold0176 (78-172)||(18064-18156)
[»] scaffold0002 (2 HSPs)
scaffold0002 (76-142)||(490378-490444)
scaffold0002 (78-153)||(434567-434641)
[»] scaffold0466 (1 HSPs)
scaffold0466 (78-153)||(7361-7435)
[»] scaffold0219 (1 HSPs)
scaffold0219 (78-142)||(27502-27566)
[»] scaffold0286 (1 HSPs)
scaffold0286 (78-153)||(11591-11665)
[»] scaffold0016 (1 HSPs)
scaffold0016 (78-153)||(114636-114710)
[»] scaffold0066 (1 HSPs)
scaffold0066 (81-146)||(20478-20542)
[»] scaffold0014 (1 HSPs)
scaffold0014 (76-153)||(80341-80417)
[»] scaffold0491 (2 HSPs)
scaffold0491 (78-153)||(11221-11296)
scaffold0491 (78-128)||(8795-8845)
[»] scaffold1519 (1 HSPs)
scaffold1519 (78-153)||(950-1023)
[»] scaffold0006 (1 HSPs)
scaffold0006 (78-146)||(149157-149224)
[»] scaffold0236 (1 HSPs)
scaffold0236 (78-128)||(10548-10597)


Alignment Details
Target: chr7 (Bit Score: 377; Significance: 0; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 377; E-Value: 0
Query Start/End: Original strand, 1 - 544
Target Start/End: Complemental strand, 27074002 - 27073486
Alignment:
Q  1 taaagaaacacatcagtaaaactttatccagtttgatcgaacaatgacctactctgaagaaaaagacctatctgtttcactatcaacgagttctttacaa 100  Q
    ||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  27074002 taaagaaacacatcaataaaactttacccagtttgatccaacaatgacctactctgaagaaaaagacctatccgtttcactgtcaacgagttctttacaa 27073903  T
Q  101 agagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaatttcccaaggtctatcgttaacaataaaata 200  Q
    ||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||| |||| ||||                      
T  27073902 agagatacaaaagagttacaagaaattaacttcaataaactcataacgaacaaaacatatttctaccaattttccaatgtct------------------ 27073821  T
Q  201 cttcccaagaacaaaagattcaatgatttcactcatccaaggtatatacaaaattttctcaacccgagataatctctaaccaaagacactcaatcataaa 300  Q
      ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27073820 --tcccaagaacaaaagattcaatgatttcactcatccaaggtgtatataaaattttctcaacccgagataatctctaaccaaagacactcaatcataaa 27073723  T
Q  301 gttatctcatttgattccttatatttatctctcttgaagccctacccaaaacttgaagaatgaagtcttatataatgcaaaagccccgaggaactgtgtc 400  Q
     ||||||| ||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27073722 attatctcctttgattccttatgtttatctctcttgaagtcctacctaaaacttgaagaatgaagtcttatataatgcaaaagccccgaggaactgtgtc 27073623  T
Q  401 acgatttgcacttgttgtgccacaatgtcatgttagtatacaaatccctcctcttcatgccgcgatttcacgttagaaaatttcgtgccatgaataatgc 500  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  27073622 acgatttgcacttgtcgtgccacaatgtcatgttagtatacaaatccctcctcttcatgccacgatttcacgttagaaaatttcgtgccatgaataatgc 27073523  T
Q  501 ttaatgcttaataactttataggaagaaaatgcaaacgctctca 544  Q
    |       ||||||||||||||||||||||||||||||||||||    
T  27073522 t-------taataactttataggaagaaaatgcaaacgctctca 27073486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 377; E-Value: 0
Query Start/End: Original strand, 1 - 544
Target Start/End: Original strand, 27204311 - 27204827
Alignment:
Q  1 taaagaaacacatcagtaaaactttatccagtttgatcgaacaatgacctactctgaagaaaaagacctatctgtttcactatcaacgagttctttacaa 100  Q
    ||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  27204311 taaagaaacacatcaataaaactttacccagtttgatccaacaatgacctactctgaagaaaaagacctatccgtttcactgtcaacgagttctttacaa 27204410  T
Q  101 agagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaatttcccaaggtctatcgttaacaataaaata 200  Q
    ||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||| |||| ||||                      
T  27204411 agagatacaaaagagttacaagaaattaacttcaataaactcataacgaacaaaacatatttctaccaattttccaatgtct------------------ 27204492  T
Q  201 cttcccaagaacaaaagattcaatgatttcactcatccaaggtatatacaaaattttctcaacccgagataatctctaaccaaagacactcaatcataaa 300  Q
      ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27204493 --tcccaagaacaaaagattcaatgatttcactcatccaaggtgtatataaaattttctcaacccgagataatctctaaccaaagacactcaatcataaa 27204590  T
Q  301 gttatctcatttgattccttatatttatctctcttgaagccctacccaaaacttgaagaatgaagtcttatataatgcaaaagccccgaggaactgtgtc 400  Q
     ||||||| ||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27204591 attatctcctttgattccttatgtttatctctcttgaagtcctacctaaaacttgaagaatgaagtcttatataatgcaaaagccccgaggaactgtgtc 27204690  T
Q  401 acgatttgcacttgttgtgccacaatgtcatgttagtatacaaatccctcctcttcatgccgcgatttcacgttagaaaatttcgtgccatgaataatgc 500  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||          
T  27204691 acgatttgcacttgtcgtgccacaatgtcatgttagtatacaaatccctcctcttcatgccacgatttcacgttagaaaatttcgtgccatgaa------ 27204784  T
Q  501 ttaatgcttaataactttataggaagaaaatgcaaacgctctca 544  Q
     |||||||||||||||||||||||||||||||||||||||||||    
T  27204785 -taatgcttaataactttataggaagaaaatgcaaacgctctca 27204827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 36574575 - 36574651
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    ||||||||| |||||||||||||||||||| ||||| |||||||||||||| ||||||||| ||||||| |||||||    
T  36574575 cactatcaatgagttctttacaaagagatataaaagggttacaagaaattagcttcaacaaactcacaaagaacaaa 36574651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 2361032 - 2361106
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||    
T  2361032 cactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaa 2361106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 6432079 - 6432005
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    |||||||||||||||||| ||||||||||||||| | |||||||||||||| ||||||||||||||||| ||||||    
T  6432079 cactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaa 6432005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 23565121 - 23565195
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||    
T  23565121 cactatcaatgagttctt-acaaagagatacaaaagagttacaagaaattagtttcaacaagctcacaaagaacaa 23565195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 26417424 - 26417350
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    |||||||||||||||||| ||||||||||||||| | |||||||||||||| ||||||||||||||||| ||||||    
T  26417424 cactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattatcttcaacaagctcacaaagaacaa 26417350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 29608845 - 29608771
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||    
T  29608845 cactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaa 29608771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 77 - 177
Target Start/End: Original strand, 3904675 - 3904776
Alignment:
Q  77 tcactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacat-atttctaccaatttccc 175  Q
    |||||||||| ||||||||||||||||||| |||||| ||||||||||||||  ||||| | |||| ||| ||||||||| | |||||||||| ||||||    
T  3904675 tcactatcaatgagttctttacaaagagatgcaaaagtgttacaagaaattacattcaataggctctcaaagaacaaaacctaatttctaccattttccc 3904774  T
Q  176 aa 177  Q
    ||    
T  3904775 aa 3904776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 98 - 154
Target Start/End: Original strand, 22328470 - 22328526
Alignment:
Q  98 caaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  22328470 caaagagatacaaaagagttacaagaaattagcttcaacaagctcacaaagaacaaa 22328526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 30024792 - 30024866
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| | |||||||||||||| ||||||||||||||||| ||||||    
T  30024792 cactatcaaagagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaatgaacaa 30024866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 81 - 154
Target Start/End: Original strand, 4253591 - 4253664
Alignment:
Q  81 tatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    |||||| ||||||||| |||||||||| ||||| |||||| ||||||| ||||||||||||||||| |||||||    
T  4253591 tatcaatgagttctttccaaagagatataaaagggttacatgaaattagcttcaacaagctcacaaagaacaaa 4253664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 19502286 - 19502219
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaa 146  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||| |||  ||||||||||||    
T  19502286 cactatcaatgagttctt-acaaagagatacaaaagagttacaagaaattagctttgacaagctcacaa 19502219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 32358114 - 32358181
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaa 146  Q
    ||||||||| |||||||| ||||||||||||||| | |||||||||||||| |||||||||||||||||    
T  32358114 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaa 32358181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 2759257 - 2759331
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||| ||| |||||||||||||||| |||||||||| |||||| ||||||    
T  2759257 cactatcaatgagttctt-acaaagagatataaatgagttacaagaaattagcttcaacaagttcacaaagaacaa 2759331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 22270081 - 22270007
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    |||||||||  ||||||| ||||||||||||||| | |||||||||||||| ||||||||||||||||| ||||||    
T  22270081 cactatcaatcagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaa 22270007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 23555148 - 23555074
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| |||||||| |||||||| |||||||||||||| |||||||||| |||||| ||||||    
T  23555148 cactatcaatgagttctt-acaaagaggtacaaaagtgttacaagaaattagcttcaacaagttcacaaagaacaa 23555074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 27347925 - 27347851
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| | |||||||||||||| |||||||||| |||||| ||||||    
T  27347925 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaa 27347851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 47674003 - 47674077
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| | |||||||||||||| |||||||||| |||||| ||||||    
T  47674003 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaa 47674077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 48491687 - 48491613
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| ||||||||| |||||||||||||| | |||||||||||||| |||||||||| |||||| ||||||    
T  48491687 cactatcaatgagttcttt-caaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaa 48491613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 98 - 153
Target Start/End: Original strand, 48599413 - 48599468
Alignment:
Q  98 caaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||    
T  48599413 caaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaa 48599468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 79 - 153
Target Start/End: Complemental strand, 1113764 - 1113691
Alignment:
Q  79 actatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    |||||||| |||||||| ||||||||||||||| | |||| ||||||||| ||||||||||||||||| ||||||    
T  1113764 actatcaatgagttctt-acaaagagatacaaatgggttataagaaattagcttcaacaagctcacaaagaacaa 1113691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 95 - 153
Target Start/End: Complemental strand, 2390374 - 2390316
Alignment:
Q  95 ttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||||||||||| | |||||||||||||| ||||||||||||||||| ||||||    
T  2390374 ttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaa 2390316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 76 - 138
Target Start/End: Complemental strand, 5116715 - 5116653
Alignment:
Q  76 ttcactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaa 138  Q
    ||||||||||| ||||||||||||||||||||||||||  |||||| |||||| |||||||||    
T  5116715 ttcactatcaatgagttctttacaaagagatacaaaaggtttacaataaattatcttcaacaa 5116653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 78 - 172
Target Start/End: Complemental strand, 31518903 - 31518810
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaattt 172  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||||||| || |||||| |||||||||| ||||||| |  ||||||||| ||||    
T  31518903 cactgtcaatgagttctt-acaaagagatacaaatgagttacaagaaactagcttcaataagctcacaaagaacaaacctaatttctacctattt 31518810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 79 - 144
Target Start/End: Original strand, 6360013 - 6360077
Alignment:
Q  79 actatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcac 144  Q
    |||||||| |||||||| ||||||||||||||| | |||||||||||||| |||||||||||||||    
T  6360013 actatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcac 6360077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 76 - 174
Target Start/End: Original strand, 43363529 - 43363629
Alignment:
Q  76 ttcactatcaacgagttctttacaaa--gagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaatttc 173  Q
    ||||||||||| ||||| ||||||||  |||||||||||||||||||| ||||||  |||||||||||| | | ||||||| |  |||||||||| ||||    
T  43363529 ttcactatcaatgagttatttacaaatagagatacaaaagagttacaataaattagtttcaacaagctctccaagaacaaacctaatttctaccattttc 43363628  T
Q  174 c 174  Q
    |    
T  43363629 c 43363629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 101 - 153
Target Start/End: Original strand, 12097941 - 12097993
Alignment:
Q  101 agagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||||| | |||||||||||||||||||||||||||||||| ||||||    
T  12097941 agagatacaaatgggttacaagaaattaacttcaacaagctcacaatgaacaa 12097993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 81 - 153
Target Start/End: Original strand, 31733032 - 31733103
Alignment:
Q  81 tatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    |||||| |||||||| ||||||||||||||| | |||||||||||||| ||||| ||||||||||| ||||||    
T  31733032 tatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaccaagctcacaaagaacaa 31733103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 3259088 - 3259029
Alignment:
Q  94 tttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    |||||||||||||||||| ||||||||| |||||| ||| ||||||||||||| ||||||    
T  3259088 tttacaaagagatacaaatgagttacaataaattagcttaaacaagctcacaaagaacaa 3259029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 4508766 - 4508840
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    |||| |||| |||||||| ||||||||||||||| | |||||||||||||| |||||| |||||||||| ||||||    
T  4508766 cactctcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaataagctcacaaagaacaa 4508840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 18126752 - 18126678
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| | |||||||||||||| ||| |||||| |||||| ||||||    
T  18126752 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttgaacaagttcacaaagaacaa 18126678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 35854022 - 35853948
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||||| |||||||||||||| |||  ||||| |||||| ||||||    
T  35854022 cactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa 35853948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 82 - 172
Target Start/End: Original strand, 31105457 - 31105546
Alignment:
Q  82 atcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaattt 172  Q
    ||||| |||||||| ||||| ||||||||| | |||||||||||||| ||||||||||||||||| ||| ||| |  ||||||||| ||||    
T  31105457 atcaatgagttctt-acaaaaagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaaaaaatctaatttctacccattt 31105546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 78 - 172
Target Start/End: Original strand, 41649071 - 41649163
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaattt 172  Q
    ||||||||| |||||||| |||||| |||||||| | |||||||||||||| ||  ||||||||||||| ||||||| |  ||||||||||||||    
T  41649071 cactatcaatgagttctt-acaaagggatacaaatgggttacaagaaattagcta-aacaagctcacaaagaacaaacctaatttctaccaattt 41649163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 78 - 151
Target Start/End: Original strand, 496043 - 496115
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaac 151  Q
    ||||||||| |||||||| | ||||||||||||| | ||| |||||||||| ||||||||||||||||| ||||    
T  496043 cactatcaatgagttctt-ataaagagatacaaatgggttgcaagaaattagcttcaacaagctcacaaagaac 496115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 36146468 - 36146534
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaa 146  Q
    ||||||||| |||||||| ||||||||||||||| | |||||| ||||||| |||||||||||||||||    
T  36146468 cactatcaatgagttctt-acaaagagatacaaatgggttaca-gaaattagcttcaacaagctcacaa 36146534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 4510608 - 4510682
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| | ||||||||||||| | |||||||||||||| |||||| || ||||||| ||||||    
T  4510608 cactatcaatgagttctt-ataaagagatacaaatgggttacaagaaattagcttcaataaactcacaaagaacaa 4510682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 4512450 - 4512524
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| | ||||||||||||| | |||||||||||||| |||||| || ||||||| ||||||    
T  4512450 cactatcaatgagttctt-ataaagagatacaaatgggttacaagaaattagcttcaataaactcacaaagaacaa 4512524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 4586269 - 4586195
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||| ||| | ||||||| |||||| |||||||||| |||||| ||||||    
T  4586269 cactatcaatgagttctt-acaaagagataaaaatgggttacaaaaaattagcttcaacaagttcacaaagaacaa 4586195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 8153450 - 8153376
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| ||||| || ||||||||||||||| |||||||||||||||| |||  |||| ||||||| ||||||    
T  8153450 cactatcaatgagttatt-acaaagagatacaaatgagttacaagaaattagctttgacaatctcacaaagaacaa 8153376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 14069893 - 14069967
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| | |||||||||||||| |||  ||||| |||||| ||||||    
T  14069893 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagctttgacaagttcacaaagaacaa 14069967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 14379921 - 14379995
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| | |||||||||||||| |||  ||||| |||||| ||||||    
T  14379921 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagctttgacaagttcacaaagaacaa 14379995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 328 - 379
Target Start/End: Complemental strand, 18396182 - 18396131
Alignment:
Q  328 tctctcttgaagccctacccaaaacttgaagaatgaagtcttatataatgca 379  Q
    ||||||||||||| ||||  ||||| ||||||||||||||||||||||||||    
T  18396182 tctctcttgaagctctacttaaaacatgaagaatgaagtcttatataatgca 18396131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 34310776 - 34310850
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||| ||||||||| | |||||||||||||| |||||||||  |||||| ||||||    
T  34310776 cactatcaatgagttctt-acaaaaagatacaaatgtgttacaagaaattagcttcaacaatttcacaaagaacaa 34310850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 38671282 - 38671356
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| |||||| |||||||| | ||||||| |||||| ||| ||||||||||||| ||||||    
T  38671282 cactatcaatgagttctt-acaaagtgatacaaatgtgttacaataaattagcttaaacaagctcacaaagaacaa 38671356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 73 - 112
Target Start/End: Complemental strand, 40808702 - 40808663
Alignment:
Q  73 tgtttcactatcaacgagttctttacaaagagatacaaaa 112  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  40808702 tgtttcactatcaacgaattctttacaaagagatacaaaa 40808663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 94 - 153
Target Start/End: Complemental strand, 43864337 - 43864278
Alignment:
Q  94 tttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    |||||||||||||||||| | |||||| ||||||| |||||||||| |||||| ||||||    
T  43864337 tttacaaagagatacaaatgggttacaggaaattagcttcaacaagttcacaaagaacaa 43864278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 47676196 - 47676270
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||  |||||||| ||||||||||||||| | |||||||||||||| |||||||||  |||||| ||||||    
T  47676196 cactatcattgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaaattcacaaagaacaa 47676270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 39731477 - 39731427
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaatta 128  Q
    ||||||||| ||||||||   ||||||||||||||||||||||||||||||    
T  39731477 cactatcaatgagttcttacaaaagagatacaaaagagttacaagaaatta 39731427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 172
Target Start/End: Original strand, 41317494 - 41317587
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaattt 172  Q
    ||||||||| |||||||| |||||| |||||||| |  ||||||||||||| |||  |||||||||||| ||||||  |  ||||||||||||||    
T  41317494 cactatcaatgagttctt-acaaagggatacaaatggattacaagaaattagctttgacaagctcacaaagaacaaccctaatttctaccaattt 41317587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 8359376 - 8359444
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaa-gagttacaagaaattaacttcaacaagctcacaa 146  Q
    ||||||||| |||||||| |||||||||||||||| | ||||||||||||||  || |||||||||||||    
T  8359376 cactatcaatgagttctt-acaaagagatacaaaatgggttacaagaaattagtttaaacaagctcacaa 8359444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 97 - 146
Target Start/End: Complemental strand, 23344065 - 23344016
Alignment:
Q  97 acaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaa 146  Q
    ||||||| |||| |||| |||||||||||||| |||||||||||||||||    
T  23344065 acaaagatatactaaagggttacaagaaattagcttcaacaagctcacaa 23344016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 4178881 - 4178808
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| ||||||||  |||||||||||||||| |||||||||||||| |||   |||| |||||| ||||||    
T  4178881 cactatcaatgagttctt--caaagagatacaaaagggttacaagaaattagctttcccaagttcacaaagaacaa 4178808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 279 - 366
Target Start/End: Complemental strand, 40808519 - 40808432
Alignment:
Q  279 accaaagacactcaatcataaagttatctcatttgattccttatatttatctctcttgaagccctacccaaaacttgaagaatgaagt 366  Q
    ||||||||||||||| | |||||||| ||| ||||||||  ||  |||||||||||| ||| |||||  | ||| |||||||||||||    
T  40808519 accaaagacactcaaccctaaagttacctcctttgattctctaagtttatctctctttaagtcctacttataacatgaagaatgaagt 40808432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 172
Target Start/End: Complemental strand, 25615961 - 25615868
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaattt 172  Q
    ||||||||| |||||||| |||||  |||||||| | |||||||||||||| ||| ||||||| ||||  ||||||| |  ||||||||| ||||    
T  25615961 cactatcaatgagttctt-acaaaatgatacaaatgggttacaagaaattagcttaaacaagcgcacatagaacaaacctaatttctacccattt 25615868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 172
Target Start/End: Complemental strand, 31519010 - 31518918
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaattt 172  Q
    |||| |||| |||||||| ||||||||||||||| |||||||||| || || |||||| |||||||||  ||||||| |  ||||||||| ||||    
T  31519010 cactgtcaatgagttctt-acaaagagatacaaatgagttacaag-aactagcttcaataagctcacagagaacaaacctaatttctacctattt 31518918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 43504212 - 43504290
Alignment:
Q  76 ttcactatcaacgagttctttacaaagagatac-aaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||||| ||||||||   |||||||||| ||||||||||||||||||||  ||  ||||| |||||| ||||||    
T  43504212 ttcactatcaatgagttcttacaaaagagatacaaaaagagttacaagaaattagatttgacaagttcacaatgaacaa 43504290  T

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Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 80 - 138
Target Start/End: Original strand, 8452252 - 8452312
Alignment:
Q  80 ctatcaacgagttctttacaaaga--gatacaaaagagttacaagaaattaacttcaacaa 138  Q
    |||||||||||| ||||||||| |  ||||||||||||| |  ||||||||||||||||||    
T  8452252 ctatcaacgagtcctttacaaatacagatacaaaagagtgatgagaaattaacttcaacaa 8452312  T

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Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 128
Target Start/End: Original strand, 9432453 - 9432503
Alignment:
Q  76 ttcactatcaacgagttctttacaaagagatacaaaagagttacaagaaatta 128  Q
    |||||||||||  ||||||||||||||||||  | ||||||||||||||||||    
T  9432453 ttcactatcaaaaagttctttacaaagagat--ataagagttacaagaaatta 9432503  T

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Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 172
Target Start/End: Original strand, 24525985 - 24526050
Alignment:
Q  108 caaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacat-atttctaccaattt 172  Q
    |||| |||||||||||||||| |||  |||||||||||| ||||||||| | ||||||||| ||||    
T  24525985 caaatgagttacaagaaattagctttgacaagctcacaaagaacaaaacctaatttctacccattt 24526050  T

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Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 139
Target Start/End: Complemental strand, 48489520 - 48489479
Alignment:
Q  98 caaagagatacaaaagagttacaagaaattaacttcaacaag 139  Q
    |||||||||||||| | |||||||||||||| ||||||||||    
T  48489520 caaagagatacaaatgggttacaagaaattagcttcaacaag 48489479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 123 - 159
Target Start/End: Original strand, 5514113 - 5514149
Alignment:
Q  123 aaattaacttcaacaagctcacaacgaacaaaacata 159  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  5514113 aaattagcttcaacaagctcacaaagaacaaaacata 5514149  T

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Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 128
Target Start/End: Original strand, 20128271 - 20128322
Alignment:
Q  76 ttcactatcaacgagttctttacaaagagatacaaaagagttacaagaaatta 128  Q
    |||| |||||| |||||| ||||||| |||||||||||| |||||||||||||    
T  20128271 ttcagtatcaatgagttcattacaaaaagatacaaaaga-ttacaagaaatta 20128322  T

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Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 25767020 - 25767095
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagag-ttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| | ||||||||||||||| | ||||||||||||| |||  ||||| |||||| ||||||    
T  25767020 cactatcaatgagttcttca-aaagagatacaaaaggggttacaagaaattagctttgacaagttcacaaagaacaa 25767095  T

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Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 29991161 - 29991094
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaa 146  Q
    ||||||||| ||||| || | ||||||||||||||| |||||||||||||| |||  ||||| ||||||    
T  29991161 cactatcaatgagttatt-agaaagagatacaaaagggttacaagaaattagctttgacaagttcacaa 29991094  T

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Target: chr8 (Bit Score: 63; Significance: 4e-27; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 201 - 379
Target Start/End: Original strand, 11712164 - 11712342
Alignment:
Q  201 cttcccaagaacaaaagattcaatgatttcactcatccaaggtatatacaaaattttctcaacccgagataatctctaaccaaagacactcaatcataaa 300  Q
    ||||| |||||||||||| |||||||||||||||||||||| | | ||||||   |||  ||||| ||| || |||| ||||||||||||||| | ||||    
T  11712164 cttccaaagaacaaaagactcaatgatttcactcatccaagatgtttacaaatgcttcggaacccaagaaaacctctcaccaaagacactcaaccctaaa 11712263  T
Q  301 gttatctcatttgattccttatatttatctctcttgaagccctacccaaaacttgaagaatgaagtcttatataatgca 379  Q
    |||| |||||||||| || ||  ||| ||||||||||||| ||||| ||||| | |||||||||  |||||||| ||||    
T  11712264 gttacctcatttgataccctaagtttctctctcttgaagctctacctaaaacataaagaatgaaaccttatatagtgca 11712342  T

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Target: chr8; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 1292523 - 1292598
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    ||||||||| |||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||    
T  1292523 cactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaa 1292598  T

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Target: chr8; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 78 - 172
Target Start/End: Original strand, 19491759 - 19491852
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaattt 172  Q
    |||||||||||||||||| ||||||||||||||| | ||||||||||||||  |||||||||||||||| ||||||| |  ||||||||| ||||    
T  19491759 cactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattagtttcaacaagctcacaaagaacaaacctaatttctacccattt 19491852  T

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Target: chr8; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 18655508 - 18655434
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| | |||||||||||||| ||||||||||||||||| ||||||    
T  18655508 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaa 18655434  T

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Target: chr8; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 30143448 - 30143374
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| | |||||||||||||| ||||||||||||||||| ||||||    
T  30143448 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaa 30143374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 78 - 172
Target Start/End: Complemental strand, 30291715 - 30291621
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacat-atttctaccaattt 172  Q
    ||||||||| || ||||| |||||| |||||||| |||||||||||||||| ||||||||||||||||| ||||||||| | ||||||||| ||||    
T  30291715 cactatcaaagaattctt-acaaagtgatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaaacctaatttctacccattt 30291621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 40221853 - 40221779
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    |||||||||||||||||| ||||||||||||||| | ||||||||||||||  |||||||||||||||| ||||||    
T  40221853 cactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattagtttcaacaagctcacaaagaacaa 40221779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 40321188 - 40321114
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| ||||| ||||||||||||||| || | |||||||||||||||||||||||||||||||| ||||||    
T  40321188 cactatcaaagagtt-tttacaaagagatactaatgggttacaagaaattaacttcaacaagctcacaatgaacaa 40321114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 42435051 - 42435125
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| | |||||||||||||| ||||||||||||||||| ||||||    
T  42435051 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaa 42435125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 78 - 156
Target Start/End: Original strand, 11712060 - 11712138
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaac 156  Q
    ||||||||| ||||| |||||||||||||| ||||| ||| |||||||||| ||||||||||||| ||| |||||||||    
T  11712060 cactatcaatgagttatttacaaagagatataaaagggtttcaagaaattagcttcaacaagctctcaaggaacaaaac 11712138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 3303730 - 3303805
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    ||||||||| |||||||| ||||||||||||||| ||||||||||||||||  || ||||||||||||| |||||||    
T  3303730 cactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattaggttaaacaagctcacaaagaacaaa 3303805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 4283632 - 4283565
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaa 146  Q
    ||||||||| |||||||| ||||||||||||||| | |||||||||||||| |||||||||||||||||    
T  4283632 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaa 4283565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 10240263 - 10240187
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    ||||||||| ||||||||||||||||||| ||| |  ||||||||||||||  |||||||||||||||| |||||||    
T  10240263 cactatcaatgagttctttacaaagagatccaacatggttacaagaaattagattcaacaagctcacaaagaacaaa 10240187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 88 - 159
Target Start/End: Complemental strand, 1822391 - 1822320
Alignment:
Q  88 gagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacata 159  Q
    ||||| |||||||| ||||| ||||| |||||||||||||| ||||||||||||||||| ||||||| ||||    
T  1822391 gagttatttacaaatagatataaaagggttacaagaaattagcttcaacaagctcacaaagaacaaaccata 1822320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 88 - 159
Target Start/End: Complemental strand, 1856836 - 1856765
Alignment:
Q  88 gagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacata 159  Q
    ||||| |||||||| ||||| ||||| |||||||||||||| ||||||||||||||||| ||||||| ||||    
T  1856836 gagttatttacaaatagatataaaagggttacaagaaattagcttcaacaagctcacaaagaacaaaccata 1856765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 18141928 - 18141854
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| |||||| |||||||| | |||||||||||||| ||||||||||||||||| ||||||    
T  18141928 cactatcaaagagttctt-acaaagtgatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaa 18141854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 27811386 - 27811312
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| | |||||| ||||||||||||||| | |||||||||||||| ||||||||||||||||| ||||||    
T  27811386 cactatcaatgggttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaa 27811312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 34256567 - 34256641
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||  ||||| |||||| ||||||    
T  34256567 cactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattaactttgacaagttcacaaagaacaa 34256641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 172
Target Start/End: Complemental strand, 40328888 - 40328794
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaa-gagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaattt 172  Q
    ||||||||| |||||||| |||||||||||||||| ||||||||||||||||  || ||||||||||||| ||||||| |  ||||||||| ||||    
T  40328888 cactatcaatgagttctt-acaaagagatacaaaatgagttacaagaaattagtttaaacaagctcacaaagaacaaacctaatttctacccattt 40328794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 42498302 - 42498228
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||| ||||||||| |||||||||||||| |||||||||| |||||| ||||||    
T  42498302 cactatcaatgagttctt-acaaagaaatacaaaagggttacaagaaattagcttcaacaagttcacaaagaacaa 42498228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 44353901 - 44353827
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| | |||||||||||||| |||||||||| |||||| ||||||    
T  44353901 cactatcaatgagttctt-acaaagagatacaaatgtgttacaagaaattagcttcaacaagttcacaaagaacaa 44353827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 4162603 - 4162530
Alignment:
Q  80 ctatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    ||||||| |||||||| ||||||||||||||| |||||||||||||||| |||||||||| || ||| |||||||    
T  4162603 ctatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagttctcaaagaacaaa 4162530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 95 - 153
Target Start/End: Complemental strand, 11384077 - 11384019
Alignment:
Q  95 ttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||||||||||| |||||||||||||||| ||||||||| ||||||| ||||||    
T  11384077 ttacaaagagatacaaatgagttacaagaaattagcttcaacaaactcacaaagaacaa 11384019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 76 - 137
Target Start/End: Original strand, 32902231 - 32902292
Alignment:
Q  76 ttcactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaaca 137  Q
    ||||||||||| || ||||||| |||||||||||||| ||||||||||||||| ||||||||    
T  32902231 ttcactatcaatgaattctttagaaagagatacaaaaaagttacaagaaattagcttcaaca 32902292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 4731766 - 4731699
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaa 146  Q
    ||||||||| |||||||| ||||||||||||||| | ||||||||||||||  ||||||||||||||||    
T  4731766 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattaggttcaacaagctcacaa 4731699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 8965751 - 8965826
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    ||||||||| |||||||| ||||||||||| ||||| |||| ||||||||||||||||||| |||| || |||||||    
T  8965751 cactatcaatgagttctt-acaaagagatataaaagggttataagaaattaacttcaacaaactcataaagaacaaa 8965826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 81 - 153
Target Start/End: Original strand, 12702697 - 12702768
Alignment:
Q  81 tatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    |||||| |||||||| ||||||||| ||||||| |||||||||||||| |||||||||| |||||| ||||||    
T  12702697 tatcaatgagttctt-acaaagagacacaaaagggttacaagaaattagcttcaacaagttcacaaagaacaa 12702768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 81 - 153
Target Start/End: Complemental strand, 15212891 - 15212820
Alignment:
Q  81 tatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    |||||| |||||||| ||||||||||||||| | |||||||||||||| |||||||||| |||||| ||||||    
T  15212891 tatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaa 15212820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 17982761 - 17982687
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| ||||||||  |||||||||||||||| ||||||||||||||||||  ||||| |||||| ||||||    
T  17982761 cactatcaatgagttcttc-caaagagatacaaaagggttacaagaaattaactttgacaagttcacaaagaacaa 17982687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 18106139 - 18106212
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||| ||||||||| |||||||||||||||| ||||||||||||| ||| ||||||    
T  18106139 cactatcaatgagttctt-acaaa-agatacaaatgagttacaagaaattagcttcaacaagctcgcaaagaacaa 18106212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 33352258 - 33352184
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| | ||||||||||||||  ||||||||| |||||| ||||||    
T  33352258 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattaggttcaacaagttcacaaagaacaa 33352184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 34254391 - 34254465
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    |||||||||  ||||||| ||||||||||||||||| ||||||||||||||||||  ||||| |||||| ||||||    
T  34254391 cactatcaataagttctt-acaaagagatacaaaagggttacaagaaattaactttgacaagttcacaaagaacaa 34254465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 43036531 - 43036457
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| || |||||||||||||  ||||||||| |||||| ||||||    
T  43036531 cactatcaatgagttctt-acaaagagatacaaatgaattacaagaaattagtttcaacaagttcacaaagaacaa 43036457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 7597723 - 7597645
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaac 156  Q
    ||||||||| |  |||||||||||||||||||||||  ||| ||||||||| ||||||||||||| | | |||||||||    
T  7597723 cactatcaatgcattctttacaaagagatacaaaaggattataagaaattagcttcaacaagctctccaagaacaaaac 7597645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 201 - 315
Target Start/End: Complemental strand, 41266974 - 41266860
Alignment:
Q  201 cttcccaagaacaaaagattcaatgatttcactcatccaaggtatatacaaaattttctcaacccgagataatctctaaccaaagacactcaatcataaa 300  Q
    ||||| |||||||| ||| |||||||||||||||| |||| |||| |||||   | || |||||| ||| || |||| |||||||||| |||| | ||||    
T  41266974 cttcctaagaacaagagactcaatgatttcactcacccaaagtatttacaactgtctcccaacccaagagaacctctcaccaaagacattcaaccctaaa 41266875  T
Q  301 gttatctcatttgat 315  Q
    |||| ||||||||||    
T  41266874 gttacctcatttgat 41266860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 76 - 173
Target Start/End: Complemental strand, 41267080 - 41266982
Alignment:
Q  76 ttcactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacat-atttctaccaatttc 173  Q
    |||||||||||  ||||||||| ||||| ||||||||||||||||||||||||   |||||||| || | | ||||||||| | |||||||||| ||||    
T  41267080 ttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagtctcaacaagttctctaagaacaaaacctaatttctaccattttc 41266982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 89 - 154
Target Start/End: Original strand, 3231866 - 3231931
Alignment:
Q  89 agttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    ||||||||||||||||||||||||  |||| || |||||| ||||||||||||||| | |||||||    
T  3231866 agttctttacaaagagatacaaaatggttaaaaaaaattagcttcaacaagctcacgaagaacaaa 3231931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 172
Target Start/End: Complemental strand, 3772284 - 3772207
Alignment:
Q  95 ttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaattt 172  Q
    ||||||||| ||||||| |||||||||||||||| ||| || |||||||||| ||||||| |  ||||||| ||||||    
T  3772284 ttacaaagatatacaaatgagttacaagaaattagcttaaataagctcacaaagaacaaacctaatttctatcaattt 3772207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 1746279 - 1746352
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| ||||||||  |||||||||||||||| |||||||||||||| |||  ||||| |||||| ||||||    
T  1746279 cactatcaatgagttctt--caaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa 1746352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 5689379 - 5689312
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaa 146  Q
    ||||||||| |||||||| ||||||||||||||| | |||||||||||||| |||  ||||||||||||    
T  5689379 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagctttgacaagctcacaa 5689312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 10929876 - 10929832
Alignment:
Q  110 aaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    ||||||||||||||||||| ||||||||||||||||| |||||||    
T  10929876 aaagagttacaagaaattagcttcaacaagctcacaaagaacaaa 10929832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 1345431 - 1345505
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| ||||||||| |||||||||||| | | |||||||||||||| |||||| || ||||||| ||||||    
T  1345431 cactatcaatgagttcttt-caaagagatacatatgggttacaagaaattagcttcaataaactcacaaagaacaa 1345505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 279 - 374
Target Start/End: Complemental strand, 7597530 - 7597436
Alignment:
Q  279 accaaagacactcaatcataaagttatctcatttgattccttatatttatctctcttgaagccctacccaaaacttgaagaatgaagtcttatata 374  Q
    ||||||||| || || ||||||||||||||  |||||| || |  |||||||||||||||| ||| | |||||| |||||||||||| ||||||||    
T  7597530 accaaagactcttaaccataaagttatctcccttgatttctcaagtttatctctcttgaag-ccttcacaaaacatgaagaatgaagccttatata 7597436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 9765853 - 9765779
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| | |||||||||||||| |||   ||||||||||| ||||||    
T  9765853 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagctttgccaagctcacaaagaacaa 9765779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 99 - 146
Target Start/End: Complemental strand, 10015169 - 10015122
Alignment:
Q  99 aaagagatacaaaagagttacaagaaattaacttcaacaagctcacaa 146  Q
    ||||||||||||| |||||||||||||||| ||||||||||| |||||    
T  10015169 aaagagatacaaatgagttacaagaaattagcttcaacaagcacacaa 10015122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 31218365 - 31218291
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| ||||||||  |||||||||||||||| |||||||||||||| |||  ||||| |||||| ||||||    
T  31218365 cactatcaatgagttcttc-caaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa 31218291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 142
Target Start/End: Complemental strand, 30909477 - 30909413
Alignment:
Q  76 ttcactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctc 142  Q
    |||||||||||||||| | ||||||||||||||||| ||||||||||||||||  || |||||||||    
T  30909477 ttcactatcaacgagt-cattacaaagagatacaaa-gagttacaagaaattagtttaaacaagctc 30909413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 98 - 172
Target Start/End: Original strand, 41364926 - 41365000
Alignment:
Q  98 caaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaattt 172  Q
    ||||| |||||||| | |||||||||||||| ||| ||||| ||||||| ||||||| |  ||||||||||||||    
T  41364926 caaagggatacaaatgtgttacaagaaattagcttaaacaaactcacaaagaacaaacctaatttctaccaattt 41365000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 377
Target Start/End: Original strand, 32902475 - 32902524
Alignment:
Q  328 tctctcttgaagccctacccaaaacttgaagaatgaagtcttatataatg 377  Q
    |||||||||||||||| | |||||| ||||||||||||||||||| ||||    
T  32902475 tctctcttgaagccctcctcaaaacatgaagaatgaagtcttatacaatg 32902524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 10930259 - 10930326
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaa 146  Q
    ||||||||| | |||||| ||||||||||| ||| | |||||||||||||| ||||||| |||||||||    
T  10930259 cactatcaatgtgttctt-acaaagagatataaatgggttacaagaaattagcttcaacgagctcacaa 10930326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 138
Target Start/End: Complemental strand, 8153865 - 8153807
Alignment:
Q  79 actatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaa 138  Q
    |||||||| |||||||| ||||||| |||||||||||||||| ||| ||| |||||||||    
T  8153865 actatcaatgagttctt-acaaagatatacaaaagagttacacgaatttagcttcaacaa 8153807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 44303963 - 44303889
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| | |||||||||||||||  ||||||||||||| |||  ||||| |||||| ||||||    
T  44303963 cactatcaatgagttcttaa-aaagagatacaaaaggattacaagaaattagctttgacaagttcacaaagaacaa 44303889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 139
Target Start/End: Complemental strand, 11137118 - 11137073
Alignment:
Q  94 tttacaaagagatacaaaagagttacaagaaattaacttcaacaag 139  Q
    |||||||||||||||||||  |||| ||||||||| ||||||||||    
T  11137118 tttacaaagagatacaaaacggttataagaaattagcttcaacaag 11137073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 374
Target Start/End: Original strand, 29796485 - 29796656
Alignment:
Q  201 cttcccaagaacaaaagattcaatgatttcactcatccaaggtatatacaaaattttctcaacccgagataatctctaaccaaagacactcaatcataaa 300  Q
    |||| ||||||||| ||| ||||||| |||||||  ||||| ||| ||||||  |||| |||||| ||| || | ||  |||||||  ||||| | ||||    
T  29796485 cttctcaagaacaagagactcaatgaattcactcgcccaagatatttacaaatgtttcccaacccaagagaacc-ctcgccaaagatcctcaaccctaaa 29796583  T
Q  301 gttatctcatttgattccttatatttatctctcttgaagccctacccaaaacttgaagaatgaagtcttatata 374  Q
    |||| ||| ||||||| || |  ||| |||||||||||| | | | |||||| |||||||||||| ||||||||    
T  29796584 gttacctcctttgatttctcaagtttctctctcttgaagtc-tcctcaaaacatgaagaatgaagccttatata 29796656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 128
Target Start/End: Complemental strand, 40873763 - 40873713
Alignment:
Q  76 ttcactatcaacgagttctttacaaagagatacaaaagagttacaagaaatta 128  Q
    ||||||||||| ||||||||||||||||| |||  ||| ||||||||||||||    
T  40873763 ttcactatcaaagagttctttacaaagagttac--aagggttacaagaaatta 40873713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 124
Target Start/End: Complemental strand, 3899240 - 3899192
Alignment:
Q  76 ttcactatcaacgagttctttacaaagagatacaaaagagttacaagaa 124  Q
    ||||||||||| || |||| |||||||||||| |||||||||| |||||    
T  3899240 ttcactatcaaagaattctctacaaagagatataaaagagttaaaagaa 3899192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 6599080 - 6599005
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    ||||||||| |||||||| |||||   ||||||| | |||||||||||||| ||| ||||||||| ||| |||||||    
T  6599080 cactatcaatgagttctt-acaaaagtatacaaatgggttacaagaaattagcttaaacaagctcgcaaagaacaaa 6599005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 6674533 - 6674458
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    ||||||||| |||||||| |||||   ||||||| | |||||||||||||| ||| ||||||||| ||| |||||||    
T  6674533 cactatcaatgagttctt-acaaaagtatacaaatgggttacaagaaattagcttaaacaagctcgcaaagaacaaa 6674458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 19945419 - 19945494
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagag-ttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| ||||||||  |||||||||||||||| | ||||||||||||| |||  ||||| |||||| ||||||    
T  19945419 cactatcaatgagttcttc-caaagagatacaaaagtggttacaagaaattagctttgacaagttcacaaagaacaa 19945494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 79 - 146
Target Start/End: Complemental strand, 40585822 - 40585754
Alignment:
Q  79 actatcaacgagttcttt-acaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaa 146  Q
    |||||||| ||||||||| ||||| |||||||||||  |||||| |||||   ||||||||||||||||    
T  40585822 actatcaatgagttcttttacaaaaagatacaaaaggcttacaaaaaattcgtttcaacaagctcacaa 40585754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 2e-25; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 78 - 172
Target Start/End: Complemental strand, 32891212 - 32891118
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacat-atttctaccaattt 172  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||| | ||||||||| ||||    
T  32891212 cactatcaacgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaaacttaatttctacccattt 32891118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 35138765 - 35138841
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| | |||||||    
T  35138765 cactatcaatgagttctttacaaagagatacaaaagagttgcaagaaattaacttcaacaaactcaccaagaacaaa 35138841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 7762373 - 7762299
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||    
T  7762373 cactatcaatgagttctt-acaaagagatacaaaagagttacaagaaattagcttcaacaagttcacaaagaacaa 7762299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 34491320 - 34491246
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||    
T  34491320 cactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaa 34491246  T

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Target: chr3; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 81 - 142
Target Start/End: Complemental strand, 20937762 - 20937701
Alignment:
Q  81 tatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctc 142  Q
    |||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  20937762 tatcaatgagttcttttcaaagagatacaaaagggttacaagaaattaacttcaacaagctc 20937701  T

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Target: chr3; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 4570060 - 4569986
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| |||||||||||||||| |||||| |||||||||| ||||||    
T  4570060 cactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaataagctcacaatgaacaa 4569986  T

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Target: chr3; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 7764572 - 7764498
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||| ||| |||||| |||||| ||||||    
T  7764572 cactatcaatgagttctt-acaaagagatacaaaagagttacaagaaattagctttaacaagttcacaaagaacaa 7764498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 95 - 153
Target Start/End: Complemental strand, 36018945 - 36018886
Alignment:
Q  95 ttacaaagagatacaaaa-gagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  36018945 ttacaaagagatacaaaatgagttacaagaaattaacttcaacaagctcacaaagaacaa 36018886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 78 - 172
Target Start/End: Complemental strand, 46173465 - 46173372
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaattt 172  Q
    ||||||||| || ||||| ||||||||||||||| | |||||||||||||| ||||||||||||||||| ||||||  |  ||||||||||||||    
T  46173465 cactatcaatgaattctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctaccaattt 46173372  T

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Target: chr3; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 78 - 172
Target Start/End: Complemental strand, 46860582 - 46860489
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaattt 172  Q
    ||||||||| ||||| || ||||||||||||||| | |||||||||||||| ||||||||||||||||| ||||||| |  ||||||||| ||||    
T  46860582 cactatcaatgagttatt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaacctaatttctacccattt 46860489  T

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Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 5433947 - 5434011
Alignment:
Q  90 gttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    |||||||||||||||||| ||||| |||||||||||||| ||| ||||||||||||| |||||||    
T  5433947 gttctttacaaagagatataaaagggttacaagaaattagctttaacaagctcacaaagaacaaa 5434011  T

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Target: chr3; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 32744496 - 32744571
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    ||||||||| |||||||| |||||| |||||||| |||||||||||||||| ||| ||||||||||||| |||||||    
T  32744496 cactatcaaagagttctt-acaaagtgatacaaatgagttacaagaaattagcttaaacaagctcacaaagaacaaa 32744571  T

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Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 49199529 - 49199604
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaa-gagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| |||||||||||||||| | |||||||||||||| ||||||||||||||||| ||||||    
T  49199529 cactatcaatgagttctt-acaaagagatacaaaatgggttacaagaaattagcttcaacaagctcacaaagaacaa 49199604  T

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Target: chr3; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 29810976 - 29810902
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| | |||||||||||||| |||||||||| |||||| ||||||    
T  29810976 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaa 29810902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 30236233 - 30236159
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| |||||||||||||||   |||||||||||||| ||||||||||||||||| ||||||    
T  30236233 cactatcaatgagttctt-acaaagagatacaaataggttacaagaaattagcttcaacaagctcacaaagaacaa 30236159  T

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Target: chr3; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 79 - 138
Target Start/End: Original strand, 40519258 - 40519316
Alignment:
Q  79 actatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaa 138  Q
    |||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  40519258 actatcaatgagttctttacaaagagatacaaaata-ttacaagaaattaacttcaacaa 40519316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 177
Target Start/End: Complemental strand, 45095271 - 45095173
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaatttcccaa 177  Q
    ||||||||| |||||||| ||||||||||||||||| |||||||||||||| |||  ||||| |||||| ||||||  |  |||||||||| ||||||||    
T  45095271 cactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctaccattttcccaa 45095173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 51398922 - 51398848
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| |||||||||||||||| |||||||||| |||| | ||||||    
T  51398922 cactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagttcactaagaacaa 51398848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 54593812 - 54593738
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| | ||||||| |||||| ||||||||||||||||| ||||||    
T  54593812 cactatcaatgagttctt-acaaagagatacaaatgggttacaataaattagcttcaacaagctcacaaagaacaa 54593738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 76 - 138
Target Start/End: Original strand, 8166514 - 8166576
Alignment:
Q  76 ttcactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaa 138  Q
    |||||||||||| ||||||||||||||||||||||||  |||| |||| ||||||||||||||    
T  8166514 ttcactatcaacaagttctttacaaagagatacaaaaaggttataagatattaacttcaacaa 8166576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 78 - 172
Target Start/End: Original strand, 22835062 - 22835155
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaattt 172  Q
    ||||||||| |||||||| |||||| |||||||| | |||||||||||||| ||| ||||||||||||| ||||||| |  ||||||||| ||||    
T  22835062 cactatcaatgagttctt-acaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaacctaatttctacccattt 22835155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 95 - 153
Target Start/End: Original strand, 31340277 - 31340335
Alignment:
Q  95 ttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||||||||||| |||||||| ||||||| ||||||||||||||||| ||||||    
T  31340277 ttacaaagagatacaaatgagttacatgaaattagcttcaacaagctcacaaagaacaa 31340335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 78 - 172
Target Start/End: Original strand, 39153421 - 39153514
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaattt 172  Q
    ||||||||| |||||||| | |||| |||||||| |||||||||||||||| ||| ||||||||||||| ||||||| |  ||||||||| ||||    
T  39153421 cactatcaatgagttctt-ataaagggatacaaatgagttacaagaaattagcttaaacaagctcacaatgaacaaacctaatttctacccattt 39153514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 78 - 155
Target Start/End: Original strand, 9666526 - 9666602
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaa 155  Q
    ||||||||| || ||||| |||||||| || ||| |||||||||||||||| ||||||||||||||||| ||||||||    
T  9666526 cactatcaaagaattctt-acaaagaggtataaatgagttacaagaaattagcttcaacaagctcacaaagaacaaaa 9666602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 81 - 153
Target Start/End: Original strand, 5236519 - 5236590
Alignment:
Q  81 tatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    |||||| |||||||| ||||||||||||||| | |||||||||||||| |||||||||| |||||| ||||||    
T  5236519 tatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaa 5236590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 78 - 174
Target Start/End: Complemental strand, 9581390 - 9581295
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaatttcc 174  Q
    ||||||||| |||||||| |||||| |||||||| | |||| ||||||||| ||| ||||||||||||| ||||||| |  ||||||||| ||||||    
T  9581390 cactatcaatgagttctt-acaaagggatacaaatgggttaaaagaaattagcttaaacaagctcacaaagaacaaacctaatttctacccatttcc 9581295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 43401861 - 43401936
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaa-gagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||| |||| | |||||||||||||| ||||||||||||||||| ||||||    
T  43401861 cactatcaatgagttctt-acaaagagataaaaaatgcgttacaagaaattagcttcaacaagctcacaaagaacaa 43401936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 54739013 - 54739088
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    ||||||||| |||||||||||| ||||||| ||||||||||| | ||||||  |||||||||||||||| |||||||    
T  54739013 cactatcaatgagttctttacagagagatataaaagagttac-ataaattagtttcaacaagctcacaaagaacaaa 54739088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 6095659 - 6095733
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| | ||||||||||||||||||||| ||| | |||| ||||||    
T  6095659 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattaacttcaagaagtttacaaagaacaa 6095733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 19683949 - 19684023
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||||| |||||||||||||| |||  ||||| |||||| ||||||    
T  19683949 cactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa 19684023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 31314553 - 31314479
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||| ||||||||| | |||||||||||||| |||||||||| |||||| ||||||    
T  31314553 cactatcaaagagttctt-acaaaaagatacaaatgggttacaagaaattagcttcaacaagatcacaatgaacaa 31314479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 37408566 - 37408492
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||||| |||||||||||||| |||  ||||| |||||| ||||||    
T  37408566 cactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa 37408492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 40734606 - 40734532
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| |||||| |||||||| | ||||||||||||||  |||||||||||||||| ||||||    
T  40734606 cactatcaatgagttctt-acaaagggatacaaatgtgttacaagaaattaggttcaacaagctcacaaagaacaa 40734532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 40735491 - 40735417
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| |||||||||||||||   ||||||| |||||| ||||||||||||||||| ||||||    
T  40735491 cactatcaatgagttctt-acaaagagatacaaactggttacaataaattagcttcaacaagctcacaaagaacaa 40735417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 44331653 - 44331579
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    |||||||||  ||||||| ||||||||||||||| |  ||||||||||||| ||||||||||||||||| ||||||    
T  44331653 cactatcaataagttctt-acaaagagatacaaatggcttacaagaaattagcttcaacaagctcacaatgaacaa 44331579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 44700538 - 44700612
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| |||||||||||||||   |||||||||||||| ||||||||| ||||||| ||||||    
T  44700538 cactatcaaagagttctt-acaaagagatacaaataggttacaagaaattagcttcaacaaactcacaaagaacaa 44700612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 47304359 - 47304285
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| || |||||||||| | | ||||||||| |||||||||||||||||||||| ||||||    
T  47304359 cactatcaatgagttctt-acgaagagatacagatgggttacaagatattaacttcaacaagctcacaaagaacaa 47304285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 78 - 152
Target Start/End: Complemental strand, 760955 - 760882
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaaca 152  Q
    ||||||||| |||||||| |||||| |||||||| | |||||||||||||| ||| ||||||||||||| |||||    
T  760955 cactatcaatgagttctt-acaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaaca 760882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 88 - 154
Target Start/End: Complemental strand, 5373332 - 5373266
Alignment:
Q  88 gagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    |||||| ||||||||||||| ||||| ||||||| |||||| |||||||||||||| || |||||||    
T  5373332 gagttccttacaaagagatataaaagggttacaataaattagcttcaacaagctcaaaaagaacaaa 5373266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 76 - 154
Target Start/End: Original strand, 25491025 - 25491103
Alignment:
Q  76 ttcactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    ||||||||||| || |||||||||||||||||||||||   || ||||||| | ||||||||||||| ||| |||||||    
T  25491025 ttcactatcaatgatttctttacaaagagatacaaaaggagtataagaaatcagcttcaacaagctctcaaagaacaaa 25491103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 78 - 172
Target Start/End: Original strand, 53921563 - 53921656
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaattt 172  Q
    ||||||||| |||||||| |||||  |||||||| |||||||||||||||| ||| |||||||||||||  |||||| |  ||||||||| ||||    
T  53921563 cactatcaatgagttctt-acaaaatgatacaaatgagttacaagaaattagctttaacaagctcacaaacaacaaacctaatttctacccattt 53921656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 23200196 - 23200272
Alignment:
Q  76 ttcactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||||| |||||||| ||||| ||||||||||| |||||||||||||| |||  ||||| |||||| ||||||    
T  23200196 ttcactatcaatgagttctt-acaaaaagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa 23200272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 98 - 151
Target Start/End: Original strand, 28253346 - 28253399
Alignment:
Q  98 caaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaac 151  Q
    |||||| ||||||||  |||||||||||||||||||||||||||||||| ||||    
T  28253346 caaagaaatacaaaatcgttacaagaaattaacttcaacaagctcacaatgaac 28253399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 23391969 - 23392044
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    ||||||||| ||||||||  ||||| |||||||| | |||||||||||||| ||| ||||||||||||| |||||||    
T  23391969 cactatcaaagagttcttg-caaagtgatacaaatgggttacaagaaattatcttaaacaagctcacaaagaacaaa 23392044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 29196446 - 29196521
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    ||||||||| |||||||| ||||||||||||||| | ||| |||||||||| |||  |||||||||||| |||||||    
T  29196446 cactatcaatgagttctt-acaaagagatacaaatgggttccaagaaattagctttgacaagctcacaaagaacaaa 29196521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 29682467 - 29682392
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    ||||||||| |||||||| |||||| |||||||| | || ||||||||||| ||| ||||||||||||| |||||||    
T  29682467 cactatcaatgagttctt-acaaagggatacaaatgggtgacaagaaattagcttaaacaagctcacaaagaacaaa 29682392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 43403804 - 43403879
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaa-gagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||| || | |||||||||||||| | ||||||||||||||||| ||||||    
T  43403804 cactatcaatgagttctt-acaaagagataaaacatgagttacaagaaatgagcttcaacaagctcacaaagaacaa 43403879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 2020250 - 2020187
Alignment:
Q  76 ttcactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaag 139  Q
    |||| |||||| |||||||||||||||| ||||||||  |||| ||||||||| ||||||||||    
T  2020250 ttcaatatcaatgagttctttacaaagaaatacaaaacggttataagaaattagcttcaacaag 2020187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 4055823 - 4055878
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaaga-gttacaagaaattaactt 132  Q
    ||||||||| |||||  |||||||||||||||||||| ||||||||||||||||||    
T  4055823 cactatcaatgagtttcttacaaagagatacaaaagaggttacaagaaattaactt 4055878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 5258204 - 5258278
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| ||||||||  |||||||||||||||| |||||||||||||| |||  ||||| |||||| ||||||    
T  5258204 cactatcaatgagttcttc-caaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa 5258278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 5260383 - 5260457
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| ||||||||  |||||||||||||||| |||||||||||||| |||  ||||| |||||| ||||||    
T  5260383 cactatcaatgagttcttc-caaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa 5260457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 29813171 - 29813097
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    |||||| || |||||||| |||||||||| |||| | |||||||||||||| |||||||||| |||||| ||||||    
T  29813171 cactataaatgagttctt-acaaagagatgcaaatgggttacaagaaattagcttcaacaagttcacaaagaacaa 29813097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 81 - 159
Target Start/End: Original strand, 1313867 - 1313945
Alignment:
Q  81 tatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacata 159  Q
    |||||| ||||||||| |||||| |||||||||  || |||||||||| ||| ||||||||| | | ||||||||||||    
T  1313867 tatcaatgagttcttttcaaagatatacaaaaggcttgcaagaaattagctttaacaagctctccaagaacaaaacata 1313945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 146
Target Start/End: Original strand, 23197997 - 23198066
Alignment:
Q  76 ttcactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaa 146  Q
    ||||||||||| |||||||| ||||| ||||||||||| |||||||||||||| |||  ||||| ||||||    
T  23197997 ttcactatcaatgagttctt-acaaaaagatacaaaagggttacaagaaattagctttgacaagttcacaa 23198066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 138
Target Start/End: Original strand, 26323131 - 26323193
Alignment:
Q  76 ttcactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaa 138  Q
    ||||||||||| ||||| ||||| |||| ||||||||  |||||||||||||| |||||||||    
T  26323131 ttcactatcaatgagttttttaccaagatatacaaaaaggttacaagaaattagcttcaacaa 26323193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 159
Target Start/End: Complemental strand, 33191939 - 33191860
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacata 159  Q
    ||||||||| |||||||||||||||| |||  |||  |||||||||| ||| ||||||||||||| | | ||||||||||||    
T  33191939 cactatcaatgagttctttacaaagacata--aaatggttacaagaacttagcttcaacaagctctctaagaacaaaacata 33191860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 374
Target Start/End: Original strand, 2075304 - 2075403
Alignment:
Q  274 ctctaaccaaagacactcaatcataaagttatctcatttgattccttatatttatctctcttgaagccctacccaaaacttgaagaatgaagtcttatat 373  Q
    |||||| ||||||| ||||| | |||||||| ||||||||||| |  |  ||| ||||||||||||||  || |||||| |||||||||||| |||||||    
T  2075304 ctctaatcaaagactctcaaccctaaagtta-ctcatttgatttcccaagtttctctctcttgaagcctcactcaaaacatgaagaatgaagccttatat 2075402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 16499137 - 16499070
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaa 146  Q
    ||||||||| |||||||| ||||||||||| ||| | || ||||||||||| |||||||||||| ||||    
T  16499137 cactatcaatgagttctt-acaaagagatataaatgggtaacaagaaattagcttcaacaagcttacaa 16499070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 137
Target Start/End: Complemental strand, 41510372 - 41510312
Alignment:
Q  77 tcactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaaca 137  Q
    ||||||||||  |||| |||| ||| ||||||||| |||||||||||||||| ||||||||    
T  41510372 tcactatcaattagttatttataaaaagatacaaacgagttacaagaaattagcttcaaca 41510312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 98 - 142
Target Start/End: Original strand, 50432733 - 50432777
Alignment:
Q  98 caaagagatacaaaagagttacaagaaattaacttcaacaagctc 142  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||    
T  50432733 caaagagatacaaaagatttgcaagaaattaacttcaacacgctc 50432777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 4075530 - 4075585
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaaga-gttacaagaaattaactt 132  Q
    ||||||||| |||||  |||||||| ||||||||||| ||||||||||||||||||    
T  4075530 cactatcaaagagtttcttacaaagtgatacaaaagaggttacaagaaattaactt 4075585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 9636186 - 9636260
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||| ||||||||||| ||||||||||||||  ||  ||||| |||||| ||||||    
T  9636186 cactatcaatgagttctt-acaaaaagatacaaaagggttacaagaaattagttttgacaagttcacaaagaacaa 9636260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 95 - 154
Target Start/End: Original strand, 51352187 - 51352245
Alignment:
Q  95 ttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    ||||||||| ||||||| | |||||||||||||||||| || |||||||||| |||||||    
T  51352187 ttacaaagaaatacaaatg-gttacaagaaattaactttaaaaagctcacaatgaacaaa 51352245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 76 - 138
Target Start/End: Complemental strand, 24635368 - 24635306
Alignment:
Q  76 ttcactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaa 138  Q
    ||||||||||| || ||  ||| |||||||||||||| |||||||| |||||| |||||||||    
T  24635368 ttcactatcaatgaattgattataaagagatacaaaatagttacaaaaaattagcttcaacaa 24635306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 40913401 - 40913352
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaatta 128  Q
    ||||||| | |||||||| ||||||||||||||| ||||||||||||||||    
T  40913401 cactatcgatgagttctt-acaaagagatacaaatgagttacaagaaatta 40913352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 39127653 - 39127580
Alignment:
Q  81 tatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    |||||| ||||| ||||| || |||||||||| |  || ||||||||| ||||||||||||||| | |||||||    
T  39127653 tatcaatgagttatttacgaaaagatacaaaaaaactataagaaattagcttcaacaagctcaccaagaacaaa 39127580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 374
Target Start/End: Original strand, 40519455 - 40519532
Alignment:
Q  297 taaagttatctcatttgattccttatatttatctctcttgaagccctacccaaaacttgaagaatgaagtcttatata 374  Q
    |||| ||||||||||||||| || |  ||| ||||||||||||| |||| ||| || ||| |||||||| ||||||||    
T  40519455 taaaattatctcatttgatttctcaagtttctctctcttgaagctctactcaatacatgatgaatgaagccttatata 40519532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 801200 - 801124
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaa-gagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| ||||||||   |||||||||||||| ||||||||||||||||  ||  ||||| |||||| ||||||    
T  801200 cactatcaatgagttcttacaaaagagatacaaaaagagttacaagaaattagatttgacaagttcacaatgaacaa 801124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 274 - 374
Target Start/End: Complemental strand, 2020080 - 2019981
Alignment:
Q  274 ctctaaccaaagacactcaatcataaagttatctcatttgattccttatatttatctctcttgaagccctacccaaaacttgaagaatgaagtcttatat 373  Q
    |||| |||||||||||||||   |||||  | | ||||||||| | || |||| |||||||||||| ||||||| |||| ||||||||||||  ||||||    
T  2020080 ctctcaccaaagacactcaactctaaagccaccgcatttgatttcctaaatttctctctcttgaagtcctaccc-aaacatgaagaatgaagcgttatat 2019982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 95 - 146
Target Start/End: Original strand, 41819598 - 41819650
Alignment:
Q  95 ttacaaagagatacaaaa-gagttacaagaaattaacttcaacaagctcacaa 146  Q
    |||||||||||||||||| | |||||||||||||| |||  ||||||||||||    
T  41819598 ttacaaagagatacaaaatgggttacaagaaattagcttagacaagctcacaa 41819650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 1e-24; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 88 - 154
Target Start/End: Original strand, 26699512 - 26699578
Alignment:
Q  88 gagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  26699512 gagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctcacaaagaacaaa 26699578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 201 - 370
Target Start/End: Complemental strand, 6677474 - 6677306
Alignment:
Q  201 cttcccaagaacaaaagattcaatgatttcactcatccaaggtatatacaaaattttctcaacccgagataatctctaaccaaagacactcaatcataaa 300  Q
    |||||||||||||| ||| ||||| ||||||||||||||| || | ||||||  |||| |||||| ||| || | || | ||||||||||||| | ||||    
T  6677474 cttcccaagaacaagagactcaattatttcactcatccaatgtgtttacaaatgtttcccaacccaagagaacccctgaacaaagacactcaaccctaaa 6677375  T
Q  301 gttatctcatttgattccttatatttatctctcttgaagccctacccaaaacttgaagaatgaagtctta 370  Q
    |||| ||| |||||| || || |||| ||| |||||||| ||||| |||||| |||||||||||| ||||    
T  6677374 gttacctcctttgataccctaaatttctctttcttgaag-cctactcaaaacatgaagaatgaagcctta 6677306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 40 - 172
Target Start/End: Complemental strand, 5350057 - 5349925
Alignment:
Q  40 aacaatgacctactctgaagaaaaagacctatctgtttcactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaag 139  Q
    |||||||||||||||||  || | ||| || || | |||| ||||||||||||||||||||||||||||||| ||| |||||| ||||| |||| |||||    
T  5350057 aacaatgacctactctggggagagagatctctccgcttcattatcaacgagttctttacaaagagatacaaacgagctacaaggaattagcttcgacaag 5349958  T
Q  140 ctcacaacgaacaaaacatatttctaccaattt 172  Q
     |||||| ||||||| |  ||||||||| ||||    
T  5349957 ttcacaaagaacaaacctaatttctacccattt 5349925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 91 - 142
Target Start/End: Original strand, 34788847 - 34788898
Alignment:
Q  91 ttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctc 142  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34788847 ttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctc 34788898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 46147451 - 46147525
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||    
T  46147451 cactatcaaagagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaatgaacaa 46147525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 78 - 172
Target Start/End: Complemental strand, 12073500 - 12073407
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaattt 172  Q
    ||||||||| |||||||| ||||||||||||||| ||||||||| |||||| ||||||||||||||||| ||||||| |  ||||||||| ||||    
T  12073500 cactatcaatgagttctt-acaaagagatacaaatgagttacaataaattagcttcaacaagctcacaaagaacaaacctaatttctacccattt 12073407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 78 - 172
Target Start/End: Complemental strand, 24969220 - 24969127
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaattt 172  Q
    |||||||||  ||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||| |  ||||||||| ||||    
T  24969220 cactatcaattagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaatctaatttctacccattt 24969127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 78 - 159
Target Start/End: Complemental strand, 12119648 - 12119567
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacata 159  Q
    |||||| || |||||||||||||||||||||||||| |||||||||||||| |||||| ||| |||||| ||||||| ||||    
T  12119648 cactataaatgagttctttacaaagagatacaaaagggttacaagaaattagcttcaaaaagttcacaaagaacaaaccata 12119567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 4588067 - 4587992
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    ||||||||| |||||||| ||||||||||||||||| |||||||||||||| |||||||||||| |||| |||||||    
T  4588067 cactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagcttcaacaagcttacaaagaacaaa 4587992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 48893698 - 48893765
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaa 146  Q
    ||||||||| |||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  48893698 cactatcaaagagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaa 48893765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 50673907 - 50673974
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaa 146  Q
    ||||||||| |||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  50673907 cactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaa 50673974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 6656064 - 6655990
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| |||||||||||||||| |||||||||| |||||| ||||||    
T  6656064 cactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagttcacaaagaacaa 6655990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 27417025 - 27417099
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| ||||| |||||||||||||||||| | |||||||||||||| ||||||||||||||||| ||||||    
T  27417025 cactatcaatgagtt-tttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaa 27417099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 56178697 - 56178771
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||||| |||||||||||||| |||||||||| |||||| ||||||    
T  56178697 cactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagcttcaacaagttcacaaagaacaa 56178771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 76 - 142
Target Start/End: Complemental strand, 34112928 - 34112862
Alignment:
Q  76 ttcactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctc 142  Q
    ||||||||||| ||||||||||||||||||| |||||| |||||| ||||||| |||||||||||||    
T  34112928 ttcactatcaatgagttctttacaaagagatgcaaaagggttacatgaaattagcttcaacaagctc 34112862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 79 - 153
Target Start/End: Original strand, 50262762 - 50262835
Alignment:
Q  79 actatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    |||||||| |||||||| ||||||||||||||| | |||||||||||||| ||||||||||||||||| ||||||    
T  50262762 actatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaa 50262835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 81 - 154
Target Start/End: Original strand, 48142440 - 48142513
Alignment:
Q  81 tatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    |||||| |||||||||||||||||||| | ||| ||||||||||| || ||||||||||||||||| |||||||    
T  48142440 tatcaatgagttctttacaaagagatatacaagggttacaagaaactagcttcaacaagctcacaaagaacaaa 48142513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 54199964 - 54200040
Alignment:
Q  76 ttcactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||||| |||||||| ||||||||||||||| | |||||||||||||| |||||||||| |||||| ||||||    
T  54199964 ttcactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaa 54200040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 6542239 - 6542314
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    |||||||||||||||||| |||||||||||||||||  | |||||||||||  |||||||||||||||| |||||||    
T  6542239 cactatcaacgagttctt-acaaagagatacaaaaggctaacaagaaattagtttcaacaagctcacaaagaacaaa 6542314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 54883128 - 54883061
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaa 146  Q
    ||||||||| |||||||| ||||||||||||||| | |||||||||||||| |||||||||||||||||    
T  54883128 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaa 54883061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 8665516 - 8665442
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| | |||||||||||||| ||||||||||||| ||| ||||||    
T  8665516 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctctcaaagaacaa 8665442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 9927518 - 9927592
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| | |||||||||||||| |||||||||| |||||| ||||||    
T  9927518 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaa 9927592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 26175696 - 26175770
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| | ||||||||||||||  |||||||||||||||| ||||||    
T  26175696 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagtttcaacaagctcacaaagaacaa 26175770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 26364344 - 26364270
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    |||||| || |||||||| ||||||||||||||| |||||||||||||||| |||||||||| |||||| ||||||    
T  26364344 cactattaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagttcacaaagaacaa 26364270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 90 - 177
Target Start/End: Complemental strand, 32091575 - 32091488
Alignment:
Q  90 gttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaatttcccaa 177  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||| ||| | | ||||||| |  ||||||| || ||||||||    
T  32091575 gttctttacaaagagatacaaaagagttacaagaaattagtttcaacaaactctccaagaacaaacctaatttctagcattttcccaa 32091488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 35662549 - 35662475
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| |||||||||||||||| ||||||||| |||| || ||||||    
T  35662549 cactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaaactcataaagaacaa 35662475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 36994632 - 36994558
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| |||||| |||||||| | |||||||||||||| ||||||||||||||||| ||||||    
T  36994632 cactatcaatgagttctt-acaaagggatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaa 36994558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 37740733 - 37740659
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| | |||||||||||||| |||||||||| |||||| ||||||    
T  37740733 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaa 37740659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 40632553 - 40632479
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| |||||||||||||||   |||||||||||||| ||||||||||||||||| ||||||    
T  40632553 cactatcaatgagttctt-acaaagagatacaaataggttacaagaaattagcttcaacaagctcacaaagaacaa 40632479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 78 - 172
Target Start/End: Complemental strand, 379488 - 379395
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaattt 172  Q
    |||||||||  ||||||| |||||| |||||||| | |||||||||||||| ||||||||||||||||| ||||||| |  ||||||||| ||||    
T  379488 cactatcaattagttctt-acaaagcgatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaacctaatttctacccattt 379395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 79 - 153
Target Start/End: Complemental strand, 31474258 - 31474185
Alignment:
Q  79 actatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    |||||||| |||||||| ||||||||||||||| |||||||||||||||| ||||||||| |||| || ||||||    
T  31474258 actatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaaactcaaaaagaacaa 31474185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 78 - 152
Target Start/End: Original strand, 36463449 - 36463522
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaaca 152  Q
    |||| |||| |||||||| ||||||||||||||| | |||||||||||||| ||||||||||||||||| |||||    
T  36463449 cactgtcaaagagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaatgaaca 36463522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 80 - 142
Target Start/End: Original strand, 44570427 - 44570489
Alignment:
Q  80 ctatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctc 142  Q
    ||||||| |||||||||||||||||||||||||  ||||||||||||||  ||||||||||||    
T  44570427 ctatcaatgagttctttacaaagagatacaaaaatgttacaagaaattagtttcaacaagctc 44570489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 2209822 - 2209754
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaa-gagttacaagaaattaacttcaacaagctcacaa 146  Q
    ||||||||| |||||||| |||||||||||||||| | |||||||||||||| |||||||||||||||||    
T  2209822 cactatcaatgagttctt-acaaagagatacaaaatgggttacaagaaattagcttcaacaagctcacaa 2209754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 81 - 142
Target Start/End: Complemental strand, 6677575 - 6677514
Alignment:
Q  81 tatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctc 142  Q
    |||||| || ||||||||||||| ||||||||| |||||||||||||| |||||||||||||    
T  6677575 tatcaaagacttctttacaaagatatacaaaagggttacaagaaattagcttcaacaagctc 6677514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 78 - 143
Target Start/End: Complemental strand, 29254602 - 29254538
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctca 143  Q
    |||||||||||||||||| ||||||||| ||||| | ||| |||||||||||||||||||||||||    
T  29254602 cactatcaacgagttctt-acaaagagacacaaatgggttgcaagaaattaacttcaacaagctca 29254538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 78 - 138
Target Start/End: Original strand, 22882810 - 22882870
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaa 138  Q
    ||||| ||| ||||||||||| |||||||||||||| |||||||||||||| |||||||||    
T  22882810 cactaccaatgagttctttacgaagagatacaaaagggttacaagaaattagcttcaacaa 22882870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 78 - 138
Target Start/End: Original strand, 22934474 - 22934534
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaa 138  Q
    ||||| ||| ||||||||||| |||||||||||||| |||||||||||||| |||||||||    
T  22934474 cactaccaatgagttctttacgaagagatacaaaagggttacaagaaattagcttcaacaa 22934534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 33989953 - 33989893
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaa 138  Q
    |||||| |||||||| ||||||||||||||||||||  ||||||||||||| |||||||||    
T  33989953 cactattaacgagttatttacaaagagatacaaaaggattacaagaaattagcttcaacaa 33989893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 34570474 - 34570548
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||  | |||||||||||||| |||||||||| |||||| ||||||    
T  34570474 cactatcaatgagttctt-acaaagagatacaattgggttacaagaaattagcttcaacaagttcacaaagaacaa 34570548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 48143151 - 48143077
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| |  |||||||||||||| |||||||||||||| |||||||||| |||||| ||||||    
T  48143151 cactatcaatgagttctt-atgaagagatacaaaagggttacaagaaattagcttcaacaagttcacaaagaacaa 48143077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 78 - 144
Target Start/End: Complemental strand, 5429787 - 5429722
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcac 144  Q
    ||||||||| |||||||| ||||| ||||||||| | |||||||||||||| |||||||||||||||    
T  5429787 cactatcaatgagttctt-acaaatagatacaaatgggttacaagaaattagcttcaacaagctcac 5429722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 78 - 156
Target Start/End: Original strand, 45687242 - 45687319
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaac 156  Q
    ||||||||| |||||||| ||||| ||||||||| |||||| ||||||||| |||  |||||||||||| |||||||||    
T  45687242 cactatcaatgagttctt-acaaatagatacaaatgagttataagaaattagctttgacaagctcacaaagaacaaaac 45687319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 88 - 146
Target Start/End: Complemental strand, 53345316 - 53345258
Alignment:
Q  88 gagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaa 146  Q
    |||||||||||||| ||||| ||||| ||||||||||||||  ||||||||||||||||    
T  53345316 gagttctttacaaaaagatataaaagggttacaagaaattagtttcaacaagctcacaa 53345258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 95 - 172
Target Start/End: Original strand, 52467430 - 52467507
Alignment:
Q  95 ttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaattt 172  Q
    |||||||| |||||||| | ||||||||| |||| ||||||||||||||||| ||||||| |  ||||||||| ||||    
T  52467430 ttacaaagtgatacaaatgggttacaagatattagcttcaacaagctcacaaagaacaaacctaatttctacccattt 52467507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 96 - 153
Target Start/End: Original strand, 55085442 - 55085499
Alignment:
Q  96 tacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    |||||||||||||||| |  ||||||||||||| ||||||||||||||||| ||||||    
T  55085442 tacaaagagatacaaatggtttacaagaaattagcttcaacaagctcacaaagaacaa 55085499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 81 - 153
Target Start/End: Complemental strand, 8648244 - 8648173
Alignment:
Q  81 tatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    |||||| |||||||| ||||||||||||||| | |||| ||||||||| ||||||||| ||||||| ||||||    
T  8648244 tatcaatgagttctt-acaaagagatacaaatgggttataagaaattagcttcaacaaactcacaatgaacaa 8648173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 142
Target Start/End: Complemental strand, 33089987 - 33089923
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctc 142  Q
    ||||||||| |||||||||||| ||||||||||||  |||| || |||||| |||||||||||||    
T  33089987 cactatcaatgagttctttacagagagatacaaaatggttataataaattagcttcaacaagctc 33089923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 95 - 139
Target Start/End: Original strand, 40975085 - 40975129
Alignment:
Q  95 ttacaaagagatacaaaagagttacaagaaattaacttcaacaag 139  Q
    |||||||||||||||| |||||||| |||||||||||||||||||    
T  40975085 ttacaaagagatacaatagagttaccagaaattaacttcaacaag 40975129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 46703609 - 46703534
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaa-gagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    |||||| || |||||||| |||||||||||||||| | |||||||||||||| ||| ||||||||||||| ||||||    
T  46703609 cactataaatgagttctt-acaaagagatacaaaatgggttacaagaaattagcttaaacaagctcacaaagaacaa 46703534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 12743985 - 12744059
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| | |||||||||||||| |||  ||||| |||||| ||||||    
T  12743985 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagctttgacaagttcacaaagaacaa 12744059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 12744107 - 12744181
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| | |||||||||||||| |||  ||||| |||||| ||||||    
T  12744107 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagctttgacaagttcacaaagaacaa 12744181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 12745374 - 12745448
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| | |||||||||||||| |||  ||||| |||||| ||||||    
T  12745374 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagctttgacaagttcacaaagaacaa 12745448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 201 - 363
Target Start/End: Original strand, 23042952 - 23043115
Alignment:
Q  201 cttcccaagaacaaaagattcaatgatttcactcatccaaggtatatacaaaattttctcaacccgagataatctctaaccaaagacactcaatcataaa 300  Q
    |||||||| ||||| |||||||||||||||| ||||||||||| | ||||||  |||| ||| |  ||| || |||| |||||||||  |||| | ||||    
T  23042952 cttcccaaaaacaagagattcaatgatttcattcatccaaggtgtttacaaatgtttcccaatctaagagaacctcttaccaaagaccttcaaccctaaa 23043051  T
Q  301 gttatctcatttgattccttatatttatctctcttgaagc-cctacccaaaacttgaagaatga 363  Q
    ||||  || ||||||| || |  ||| ||||| ||||||| || || |||||| ||||||||||    
T  23043052 gttaaatcttttgatttctcaagtttctctctgttgaagctcccactcaaaacatgaagaatga 23043115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 83 - 177
Target Start/End: Original strand, 44967894 - 44967988
Alignment:
Q  83 tcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacat-atttctaccaatttcccaa 177  Q
    |||||||||| |||||||||||||||||| | |||||||||||||  ||||| ||||||| | | || |||||| | |||||||||| ||||||||    
T  44967894 tcaacgagttttttacaaagagatacaaatg-gttacaagaaattggcttcagcaagctctccaagagcaaaacctaatttctaccattttcccaa 44967988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 47038471 - 47038544
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||| ||| ||||| ||||||||| || ||||||||||||| ||||||||||||||||| ||||||    
T  47038471 cactatcaatgagtcctt-acaaacagatacaaatga-ttacaagaaattagcttcaacaagctcacaaagaacaa 47038544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 5370143 - 5370192
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaatta 128  Q
    ||||||||| |||||||| ||||||||||||||||| ||||||||||||||    
T  5370143 cactatcaatgagttctt-acaaagagatacaaaagggttacaagaaatta 5370192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 100 - 153
Target Start/End: Complemental strand, 21688336 - 21688283
Alignment:
Q  100 aagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    |||||||||||| ||||||||| ||||||  |||||||||||||||| ||||||    
T  21688336 aagagatacaaatgagttacaaaaaattagtttcaacaagctcacaaagaacaa 21688283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 279 - 379
Target Start/End: Original strand, 21704067 - 21704168
Alignment:
Q  279 accaaagacactcaatcataaagttatctcatttgattccttatatttatctctcttgaagcc-ctacccaaaacttgaagaatgaagtcttatataatg 377  Q
    |||||||||  |||| | |||||||| ||||||||||| || |  ||| |||||||||||||| |||| |||||| |||| |||||||||||| ||| ||    
T  21704067 accaaagactttcaaccttaaagttacctcatttgatttctcaagtttctctctcttgaagcctctacacaaaacatgaaaaatgaagtcttaaatagtg 21704166  T
Q  378 ca 379  Q
    ||    
T  21704167 ca 21704168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 81 - 142
Target Start/End: Original strand, 22628955 - 22629018
Alignment:
Q  81 tatcaacgagttctttacaaagagata--caaaagagttacaagaaattaacttcaacaagctc 142  Q
    |||||| ||||||||||| |||||| |  ||||||||||| |||||||||||||||| ||||||    
T  22628955 tatcaatgagttctttactaagagagatgcaaaagagttataagaaattaacttcaataagctc 22629018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 41964524 - 41964449
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaa-gagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| |||||| ||||||||| | ||||||| |||||| ||| ||||||||||||| ||||||    
T  41964524 cactatcaatgagttctt-acaaagggatacaaaatgggttacaataaattagcttaaacaagctcacaaagaacaa 41964449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 12745496 - 12745570
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| | ||||||||||||||  ||  ||||| |||||| ||||||    
T  12745496 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagttttgacaagttcacaaagaacaa 12745570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 13992353 - 13992426
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| |||| |||||||||||||||||||||||||||  ||  ||||| |||||| ||||||    
T  13992353 cactatcaatgagttctt-acaa-gagatacaaaagagttacaagaaattagatttgacaagttcacaaagaacaa 13992426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 141
Target Start/End: Original strand, 21703895 - 21703958
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagct 141  Q
    |||| |||| |||||||||||||| ||||||||||  | |||||||||| | ||||||||||||    
T  21703895 cactgtcaatgagttctttacaaaaagatacaaaaagggtacaagaaatcatcttcaacaagct 21703958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 29999866 - 29999941
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| ||||||||   ||| |||||||||||||||||||||||||| |||  ||| | |||||| ||||||    
T  29999866 cactatcaatgagttcttacaaaaaagatacaaaagagttacaagaaattagctttgacatgttcacaaagaacaa 29999941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 41639534 - 41639460
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||| | |||||||| ||||| ||||||||| | |||||||||||||| |||||| ||| |||||| ||||||    
T  41639534 cactatcgatgagttctt-acaaatagatacaaatgggttacaagaaattagcttcaaaaagttcacaaagaacaa 41639460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 128
Target Start/End: Complemental strand, 41961531 - 41961476
Alignment:
Q  73 tgtttcactatcaacgagttctttacaaagagatacaaaagagttacaagaaatta 128  Q
    ||||||| |||||| || ||||||||||||||||||||||   |||||||||||||    
T  41961531 tgtttcaatatcaatgacttctttacaaagagatacaaaatgattacaagaaatta 41961476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 297 - 376
Target Start/End: Original strand, 43208129 - 43208207
Alignment:
Q  297 taaagttatctcatttgattccttatatttatctctcttgaagccctacccaaaacttgaagaatgaagtcttatataat 376  Q
    ||||||||||| ||| |||| || |  ||||||||| |||||||  ||| |||||| |||||||||||||||||||||||    
T  43208129 taaagttatcttattcgatttctcaagtttatctcttttgaagcg-tactcaaaacatgaagaatgaagtcttatataat 43208207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 52095422 - 52095496
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| || ||||| ||||||||||||||| | |||||||||||||| |||  ||||| |||||| ||||||    
T  52095422 cactatcaaagatttctt-acaaagagatacaaatgggttacaagaaattagctttgacaagttcacaaagaacaa 52095496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 172
Target Start/End: Complemental strand, 5871928 - 5871835
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaattt 172  Q
    ||||||||| ||||||||  ||||| |||| ||| | |||||||||||||  ||| ||||||||||||| ||||||| |  ||||||||| ||||    
T  5871928 cactatcaaagagttcttg-caaagtgataaaaatgggttacaagaaatttgcttaaacaagctcacaaagaacaaacctaatttctacccattt 5871835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 76 - 138
Target Start/End: Original strand, 6199930 - 6199994
Alignment:
Q  76 ttcactatcaacgagttctttacaaaga--gatacaaaagagttacaagaaattaacttcaacaa 138  Q
    ||||||||||| ||||| |||||||| |  |||||||||||||||||| ||||||  ||||||||    
T  6199930 ttcactatcaatgagttatttacaaatatagatacaaaagagttacaataaattagtttcaacaa 6199994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 79 - 138
Target Start/End: Original strand, 1122876 - 1122936
Alignment:
Q  79 actatcaacgagttctttacaaagagatacaaaaga-gttacaagaaattaacttcaacaa 138  Q
    |||||||| |||||  |||||||||||||||||| | ||||| | ||||||||||||||||    
T  1122876 actatcaatgagtttcttacaaagagatacaaaaaatgttactataaattaacttcaacaa 1122936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 297 - 379
Target Start/End: Complemental strand, 53345127 - 53345043
Alignment:
Q  297 taaagttatctcatttgattccttatatttatctctcttgaagcc-ctacc-caaaacttgaagaatgaagtcttatataatgca 379  Q
    |||||||| ||||||| ||| || | |||| | |||||||||||| ||||| | |||| ||||||||||||||||||||| ||||    
T  53345127 taaagttacctcatttaatttctcaaatttttttctcttgaagcctctacctcgaaacatgaagaatgaagtcttatatagtgca 53345043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 4e-24; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 78 - 167
Target Start/End: Original strand, 603148 - 603236
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctacc 167  Q
    |||||||||||||||||| ||||||||||||||| | |||||||||||||| ||||||||||||||||| |||||| ||| |||||||||    
T  603148 cactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaacacaaatttctacc 603236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 79 - 154
Target Start/End: Complemental strand, 5043734 - 5043660
Alignment:
Q  79 actatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    |||||||| |||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||    
T  5043734 actatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaa 5043660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 78 - 177
Target Start/End: Original strand, 26954346 - 26954444
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaatttcccaa 177  Q
    ||||||||| |||||||| ||||||||||||| | |||||||||||||||| ||||||||||||||||| ||||||  |  |||| ||||||||||||||    
T  26954346 cactatcaatgagttctt-acaaagagatacagatgagttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttataccaatttcccaa 26954444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 78 - 172
Target Start/End: Original strand, 2972999 - 2973092
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaattt 172  Q
    ||||||||| |||||||| ||||||||||||||| | |||||||||||||| ||||||||||||||||| ||||||| |  ||||||||| ||||    
T  2972999 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaacctaatttctacccattt 2973092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 17758131 - 17758057
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| | |||||||||||||| ||||||||||||||||| ||||||    
T  17758131 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaa 17758057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 21589039 - 21588965
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| | |||||||||||||| ||||||||||||||||| ||||||    
T  21589039 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaa 21588965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 21593772 - 21593698
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| | |||||||||||||| ||||||||||||||||| ||||||    
T  21593772 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaa 21593698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 78 - 177
Target Start/End: Complemental strand, 4045532 - 4045432
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacat-atttctaccaatttccca 176  Q
    ||||||||| ||||| |||||||||||||| ||||   ||||||||||||| |||||||||||||| || ||||||| | | |||||||||| |||||||    
T  4045532 cactatcaatgagttatttacaaagagatataaaatgattacaagaaattagcttcaacaagctcataaagaacaaaccctaatttctaccattttccca 4045433  T
Q  177 a 177  Q
    |    
T  4045432 a 4045432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 81 - 168
Target Start/End: Complemental strand, 186820 - 186733
Alignment:
Q  81 tatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctacca 168  Q
    |||||| || ||||||||||||||||||||||||| || || || ||||||||||||||||| | | ||||||| | |||||||||||    
T  186820 tatcaatgaattctttacaaagagatacaaaagagctataaaaatttaacttcaacaagctctccaagaacaaaccttatttctacca 186733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 177
Target Start/End: Original strand, 5406260 - 5406358
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaatttcccaa 177  Q
    ||||||||| |||||||| ||||||||||||||||| |||||||||||||| |||  ||||| |||||| ||||||  |  |||||||||| ||||||||    
T  5406260 cactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctaccattttcccaa 5406358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 177
Target Start/End: Original strand, 5410585 - 5410683
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaatttcccaa 177  Q
    ||||||||| |||||||| ||||||||||||||||| |||||||||||||| |||  ||||| |||||| ||||||  |  |||||||||| ||||||||    
T  5410585 cactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctaccattttcccaa 5410683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 17763098 - 17763024
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| ||||||||  |||| ||||||||| |||||||||||||||| ||||||||||||||||| ||||||    
T  17763098 cactatcaatgagttcttc-caaaaagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaa 17763024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 26830183 - 26830257
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| |  ||||||||||||| ||||||||||||||||| ||||||    
T  26830183 cactatcaatgagttctt-acaaagagatacaaatggattacaagaaattagcttcaacaagctcacaaagaacaa 26830257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 177
Target Start/End: Original strand, 31404735 - 31404833
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaatttcccaa 177  Q
    ||||||||| |||||||| ||||||||||||||||| |||||||||||||| |||  ||||| |||||| ||||||  |  |||||||||| ||||||||    
T  31404735 cactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctaccattttcccaa 31404833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 78 - 172
Target Start/End: Original strand, 3038963 - 3039056
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaattt 172  Q
    |||||| || |||||||| ||||||||||||||| | |||||||||||||| |||||| |||||||||| ||||||  |  ||||||||||||||    
T  3038963 cactattaaagagttctt-acaaagagatacaaatgggttacaagaaattagcttcaaaaagctcacaatgaacaaccctaatttctaccaattt 3039056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 95 - 153
Target Start/End: Original strand, 33211261 - 33211319
Alignment:
Q  95 ttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||||||||||| ||| |||||||||||||||||| ||||||||||| ||||||    
T  33211261 ttacaaagagatacaaatgagctacaagaaattaacttcatcaagctcacaaagaacaa 33211319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 3808768 - 3808843
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaa-gagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| |||||||||||||||| | ||||||||||||||  |||||||||||||||| ||||||    
T  3808768 cactatcaatgagttctt-acaaagagatacaaaatgggttacaagaaattagtttcaacaagctcacaaagaacaa 3808843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 9183091 - 9183165
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| | |||||||||||||| |||||||||  |||||| ||||||    
T  9183091 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaaattcacaaagaacaa 9183165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 28137468 - 28137542
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||| ||||||| | |||||||||||||| ||| ||||||||||||| ||||||    
T  28137468 cactatcaatgagttctt-acaaagaaatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaa 28137542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 82 - 153
Target Start/End: Original strand, 33160416 - 33160486
Alignment:
Q  82 atcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||| |||  ||||| |||||| ||||||    
T  33160416 atcaatgagttctt-acaaagagatacaaaagagttacaagaaattagctttgacaagttcacaaagaacaa 33160486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 78 - 144
Target Start/End: Complemental strand, 25073677 - 25073611
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcac 144  Q
    ||||||||| |||||||||||| ||||||||||||| ||||||| ||| || ||| |||||||||||    
T  25073677 cactatcaatgagttctttacatagagatacaaaagggttacaataaaatagctttaacaagctcac 25073611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 142
Target Start/End: Complemental strand, 2908567 - 2908503
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctc 142  Q
    ||||||||| |||||||||||||  |||||||||||||||  || |||||| |||||||||||||    
T  2908567 cactatcaatgagttctttacaataagatacaaaagagttgtaaaaaattatcttcaacaagctc 2908503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 5413454 - 5413528
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||||| |||||||||||||| |||  ||||| || ||| ||||||    
T  5413454 cactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagctttgacaagttcgcaaagaacaa 5413528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 30834596 - 30834670
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| ||||||||  |||||||||||||||| |||||||||||||| |||  ||||| |||||| ||||||    
T  30834596 cactatcaatgagttcttc-caaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa 30834670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 177
Target Start/End: Original strand, 3072817 - 3072919
Alignment:
Q  76 ttcactatcaacgagttctttacaaagagatacaaaa-gagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaatttcc 174  Q
    ||||||||||| ||||||||   |||||||||||||| ||||||||||||||||  ||  ||||| |||||| ||||||  |  |||||||||| |||||    
T  3072817 ttcactatcaatgagttcttacaaaagagatacaaaaagagttacaagaaattagatttgacaagttcacaatgaacaaccctaatttctaccattttcc 3072916  T
Q  175 caa 177  Q
    |||    
T  3072917 caa 3072919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 95 - 144
Target Start/End: Complemental strand, 26800680 - 26800630
Alignment:
Q  95 ttacaaagagatacaaaag-agttacaagaaattaacttcaacaagctcac 144  Q
    ||||||||||||||||||  ||||||||||||||| |||||||||||||||    
T  26800680 ttacaaagagatacaaaattagttacaagaaattagcttcaacaagctcac 26800630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 95 - 153
Target Start/End: Original strand, 22424901 - 22424961
Alignment:
Q  95 ttacaaagagatacaaaa--gagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||||||||||||  | |||||||||||||| ||| ||||||||||||| ||||||    
T  22424901 ttacaaagagatacaaaaatgggttacaagaaattagcttaaacaagctcacaaagaacaa 22424961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 2171592 - 2171665
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| | |||||||||||||| |||  ||||| |||||| ||||||    
T  2171592 cactatcaatgagttctt-acaaagagatacaaagg-gttacaagaaattagctttgacaagttcacaaagaacaa 2171665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 115 - 172
Target Start/End: Complemental strand, 16569106 - 16569048
Alignment:
Q  115 gttacaagaaattaacttcaacaagctcacaacgaacaaaacat-atttctaccaattt 172  Q
    |||||||||||||| ||| ||||||||||||| ||||||||| | ||||||||| ||||    
T  16569106 gttacaagaaattagcttaaacaagctcacaaagaacaaaacctaatttctacccattt 16569048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 12221176 - 12221213
Alignment:
Q  91 ttctttacaaagagatacaaaagagttacaagaaatta 128  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  12221176 ttctttacaaagtgatacaaaagagttacaaaaaatta 12221213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 138
Target Start/End: Original strand, 27106178 - 27106210
Alignment:
Q  106 tacaaaagagttacaagaaattaacttcaacaa 138  Q
    ||||||||||||||||||||||| |||||||||    
T  27106178 tacaaaagagttacaagaaattagcttcaacaa 27106210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 138
Target Start/End: Original strand, 27147984 - 27148016
Alignment:
Q  106 tacaaaagagttacaagaaattaacttcaacaa 138  Q
    ||||||||||||||||||||||| |||||||||    
T  27147984 tacaaaagagttacaagaaattagcttcaacaa 27148016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 4e-24; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 24398163 - 24398090
Alignment:
Q  81 tatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||    
T  24398163 tatcaatgagttctttacaaagagatacaaaagggttacaagaaattagcttcaacaagctcacaaagaacaaa 24398090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 36773670 - 36773596
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||    
T  36773670 cactatcaaagagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaa 36773596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 78 - 172
Target Start/End: Original strand, 2334478 - 2334571
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaattt 172  Q
    ||||||||| |||||||| ||||||||||||||||||||||| |||||||| |||||||||| |||||| ||||||  | |||||||||| ||||    
T  2334478 cactatcaatgagttctt-acaaagagatacaaaagagttactagaaattagcttcaacaagttcacaaagaacaacccttatttctacccattt 2334571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 80 - 154
Target Start/End: Complemental strand, 33648278 - 33648204
Alignment:
Q  80 ctatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    ||||||| |||||||||||||||| ||||||||| |||||| ||||||| ||||||||||||||||| |||||||    
T  33648278 ctatcaatgagttctttacaaagaaatacaaaagggttacaggaaattagcttcaacaagctcacaaagaacaaa 33648204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 76 - 142
Target Start/End: Original strand, 42261543 - 42261609
Alignment:
Q  76 ttcactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctc 142  Q
    ||||||||||| |||| ||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  42261543 ttcactatcaatgagtactttacaaagatatacaaaagagttacaagaaattagcttcaacaagctc 42261609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 78 - 155
Target Start/End: Original strand, 17490208 - 17490284
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaa 155  Q
    ||||||||| |||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||| ||| ||||    
T  17490208 cactatcaatgagttctt-acaaagagttacaaaagagttacaagaaattagcttcaacaagctcacaaagaataaaa 17490284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 6595066 - 6595140
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    |||||||||||||||||| |||||||||| |||||| |||||||||||||| |||||||||| |||||| ||||||    
T  6595066 cactatcaacgagttctt-acaaagagattcaaaagggttacaagaaattagcttcaacaagttcacaaagaacaa 6595140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 76 - 168
Target Start/End: Complemental strand, 41454345 - 41454253
Alignment:
Q  76 ttcactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctacca 168  Q
    ||||||||||| |||||||||||||| | ||||||||||||| | |||||||| ||||||||||||| |||  |||||| |  ||||||||||    
T  41454345 ttcactatcaatgagttctttacaaatatatacaaaagagttgctagaaattagcttcaacaagctctcaaaaaacaaatctaatttctacca 41454253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 1631792 - 1631866
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| | ||||||||| |||| ||||||||||||||||| ||||||    
T  1631792 cactatcaatgagttctt-acaaagagatacaaatgggttacaagatattagcttcaacaagctcacaaagaacaa 1631866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 141
Target Start/End: Original strand, 7815333 - 7815395
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagct 141  Q
    |||||| || |||||||| |||||||||||||||||||||||||||||||| ||||||||||||    
T  7815333 cactataaatgagttctt-acaaagagatacaaaagagttacaagaaattagcttcaacaagct 7815395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 40 - 138
Target Start/End: Original strand, 12123605 - 12123704
Alignment:
Q  40 aacaatgacctactctgaagaaaa-agacctatctgtttcactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaa 138  Q
    ||||||||| ||||||| |||||| |||  | |||| ||||||||||  ||||||||||||||  ||||||||||||||||||||||| | |||||||||    
T  12123605 aacaatgacttactctggagaaaagagatttctctgcttcactatcattgagttctttacaaaatgatacaaaagagttacaagaaataagcttcaacaa 12123704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 33162510 - 33162584
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||| ||||||||||| | |||||||||||||| ||||||||||||||||| ||||||    
T  33162510 cactatcaatgagttctt-acagagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaa 33162584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 75 - 142
Target Start/End: Original strand, 34811278 - 34811345
Alignment:
Q  75 tttcactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctc 142  Q
    |||||||||||| |||||  ||||||||||||| ||||||||||||| |||||| |||||||||||||    
T  34811278 tttcactatcaatgagtttcttacaaagagatataaaagagttacaataaattagcttcaacaagctc 34811345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 45727037 - 45726963
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| |||||||||||||||   |||||||||||||| ||||||||||||||||| ||||||    
T  45727037 cactatcaatgagttctt-acaaagagatacaaataggttacaagaaattagcttcaacaagctcacaaagaacaa 45726963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 78 - 172
Target Start/End: Complemental strand, 11690609 - 11690516
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaattt 172  Q
    |||||||||||| ||||| |||||| |||||||| | |||||||||||||| ||| ||||||||||||| ||||||| |  ||||||||| ||||    
T  11690609 cactatcaacgatttctt-acaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaacctaatttctacccattt 11690516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 78 - 172
Target Start/End: Original strand, 35446944 - 35447037
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaattt 172  Q
    ||||||||| |||||||| ||||||||||||||| | ||||||||||||||  ||||||||| |||||| ||||||  |  ||||||||||||||    
T  35446944 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagattcaacaagatcacaaagaacaaccctaatttctaccaattt 35447037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 78 - 172
Target Start/End: Complemental strand, 42362460 - 42362367
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaattt 172  Q
    ||||||||| |||||||| |||||| |||||||| | |||||||||||||| ||| ||||||||||||| ||||||| |  ||||||||| ||||    
T  42362460 cactatcaatgagttctt-acaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaacctaatttctacccattt 42362367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 78 - 167
Target Start/End: Original strand, 723804 - 723892
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctacc 167  Q
    ||||||||| |||||||| |||||| |||||||| | |||||||||||||| ||| ||||||||||||| ||||||| |  |||||||||    
T  723804 cactatcaatgagttctt-acaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaacctaatttctacc 723892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 40 - 156
Target Start/End: Original strand, 7597031 - 7597148
Alignment:
Q  40 aacaatgacctactctgaagaaaa-agacctatctgtttcactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaa 138  Q
    |||||||||||||||||||| | | ||| || || |||  || ||||| |||||||||||||| |||||||||||| |||||||||||||  ||| ||||    
T  7597031 aacaatgacctactctgaaggagagagatctctccgttctacaatcaatgagttctttacaaaaagatacaaaagacttacaagaaattagtttcgacaa 7597130  T
Q  139 gctcacaacgaacaaaac 156  Q
    | ||| || |||||||||    
T  7597131 gttcataaggaacaaaac 7597148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 4503193 - 4503266
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| ||||||||  ||||||||||||||||||||||||||||||| |||  ||||| |||||| ||||||    
T  4503193 cactatcaatgagttctt--caaagagatacaaaagagttacaagaaattagctttgacaagttcacaaagaacaa 4503266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 78 - 176
Target Start/End: Complemental strand, 13121875 - 13121779
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacat-atttctaccaatttccca 176  Q
    ||||||||| ||||| | |||||||||||||||| |  ||||||||||||| ||||||||||||||||| ||||||| | | |||||||||| |||||||    
T  13121875 cactatcaatgagtt-tctacaaagagatacaaagg--ttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctaccattttccca 13121779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 26353292 - 26353217
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    ||||||||| |||| ||| ||||| ||||||||||| |||||||||||||| ||||||||| ||||||| |||||||    
T  26353292 cactatcaatgagtactt-acaaaaagatacaaaagtgttacaagaaattagcttcaacaaactcacaaagaacaaa 26353217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 76 - 141
Target Start/End: Original strand, 42019928 - 42019995
Alignment:
Q  76 ttcactatcaacgagttcttt--acaaagagatacaaaagagttacaagaaattaacttcaacaagct 141  Q
    ||||||||||| ||||| |||  |||||||||||||||||||||||||||||||| |||| |||||||    
T  42019928 ttcactatcaatgagttttttttacaaagagatacaaaagagttacaagaaattagcttctacaagct 42019995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 45099862 - 45099789
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| ||||||||  ||||||||||||||||||||||||||||||| |||  ||||| |||||| ||||||    
T  45099862 cactatcaatgagttctt--caaagagatacaaaagagttacaagaaattagctttgacaagttcacaaagaacaa 45099789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 141
Target Start/End: Original strand, 17057429 - 17057491
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagct 141  Q
    ||||||||| |||||||| ||||||||||||||| ||||||||| |||||| ||||||||||||    
T  17057429 cactatcaatgagttctt-acaaagagatacaaatgagttacaaaaaattagcttcaacaagct 17057491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 141
Target Start/End: Original strand, 17085412 - 17085474
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagct 141  Q
    ||||||||| |||||||| ||||||||||||||| ||||||||| |||||| ||||||||||||    
T  17085412 cactatcaatgagttctt-acaaagagatacaaatgagttacaaaaaattagcttcaacaagct 17085474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 30833454 - 30833379
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| ||||||||   ||||||||||||||| ||||||||||||||||||  ||||| |||||| ||||||    
T  30833454 cactatcaatgagttcttacaaaagagatacaaaagggttacaagaaattaactttgacaagttcacaaagaacaa 30833379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 36318069 - 36318143
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| | ||||||| ||||||  |||||||||||||||| ||||||    
T  36318069 cactatcaatgagttctt-acaaagagatacaaatgggttacaataaattagtttcaacaagctcacaaagaacaa 36318143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 145
Target Start/End: Original strand, 36988136 - 36988202
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcaca 145  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||  ||  |||||||||||    
T  36988136 cactatcaatgagttctt-acaaagagatacaaaagagttacaagaaattagttttgacaagctcaca 36988202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 78 - 172
Target Start/End: Original strand, 11151651 - 11151744
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaattt 172  Q
    ||||||| | |||||||| |||||| |||||||| | |||||||||||||| ||| ||||||||||||| ||||||| |  ||||||||| ||||    
T  11151651 cactatctaagagttctt-acaaagtgatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaatctaatttctacccattt 11151744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 76 - 154
Target Start/End: Complemental strand, 41446250 - 41446172
Alignment:
Q  76 ttcactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    |||||| ||||| ||||||||| ||||||||||||||| |||||   |||||| ||||||||||||| ||| |||||||    
T  41446250 ttcactgtcaaccagttctttataaagagatacaaaagggttacttaaaattagcttcaacaagctctcaaagaacaaa 41446172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 76 - 138
Target Start/End: Original strand, 36282973 - 36283037
Alignment:
Q  76 ttcactatcaacgagttctttacaaaga--gatacaaaagagttacaagaaattaacttcaacaa 138  Q
    ||||||||||| ||||||||||| || |  |||| ||||||||||||||||||||||||||||||    
T  36282973 ttcactatcaaagagttctttactaatatagataaaaaagagttacaagaaattaacttcaacaa 36283037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 146
Target Start/End: Complemental strand, 11049661 - 11049594
Alignment:
Q  79 actatcaacgagttctttacaaagagatac-aaaagagttacaagaaattaacttcaacaagctcacaa 146  Q
    |||||||| |||||||| |||||||||||| ||||| |||| ||||||||| |||||||||||||||||    
T  11049661 actatcaatgagttctt-acaaagagatactaaaagggttataagaaattagcttcaacaagctcacaa 11049594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 142
Target Start/End: Original strand, 30218104 - 30218168
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctc 142  Q
    ||||||||| || || |||||||||||||||||||  |||||||||||||| |||||| ||||||    
T  30218104 cactatcaatgaattatttacaaagagatacaaaatggttacaagaaattagcttcaataagctc 30218168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 4484390 - 4484465
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| ||||||||   ||||||||||||||| |||||||||||||| |||  ||||| |||||| ||||||    
T  4484390 cactatcaatgagttcttacaaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa 4484465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 5723316 - 5723390
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||||  |||||||||||||| |||  ||||| |||||| ||||||    
T  5723316 cactatcaatgagttctt-acaaagagatacaaaaaggttacaagaaattagctttgacaagttcacaaagaacaa 5723390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 29867977 - 29867903
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| | |||||||||||||| |||  ||||| |||||| ||||||    
T  29867977 cactatcaaagagttctt-acaaagagatacaaatgggttacaagaaattagctttgacaagttcacaaagaacaa 29867903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 98 - 153
Target Start/End: Original strand, 36205743 - 36205798
Alignment:
Q  98 caaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||||||||||||||||||||||||| |||  ||||| |||||| ||||||    
T  36205743 caaagagatacaaaagagttacaagaaattagctttgacaagttcacaaagaacaa 36205798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 38312348 - 38312274
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| ||| |||| ||||||||||||||| | ||||||||||||||  ||||||||| |||||| ||||||    
T  38312348 cactatcaatgagatctt-acaaagagatacaaatgggttacaagaaattagtttcaacaagttcacaaagaacaa 38312274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 138
Target Start/End: Complemental strand, 4561199 - 4561137
Alignment:
Q  76 ttcactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaa 138  Q
    ||||||| ||| || || |||||||||||||||||||  |||||||||||||| |||||||||    
T  4561199 ttcactaacaatgaattttttacaaagagatacaaaaatgttacaagaaattagcttcaacaa 4561137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 79 - 153
Target Start/End: Complemental strand, 32289671 - 32289597
Alignment:
Q  79 actatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    |||||||| ||||||||   ||||||||||||||||||||||||||||||  ||  ||||| |||||| ||||||    
T  32289671 actatcaatgagttcttacaaaagagatacaaaagagttacaagaaattagatttgacaagttcacaaagaacaa 32289597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 95 - 153
Target Start/End: Original strand, 42288186 - 42288244
Alignment:
Q  95 ttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| ||||||| | ||||||| |||||| ||||||||||||||||| ||||||    
T  42288186 ttacaaagaaatacaaatgggttacaataaattagcttcaacaagctcacaaagaacaa 42288244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 78 - 139
Target Start/End: Complemental strand, 7451226 - 7451166
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaag 139  Q
    ||||||||| ||||| || ||||||||||||||| || ||||||||||||| ||||||||||    
T  7451226 cactatcaatgagttatt-acaaagagatacaaatgaattacaagaaattagcttcaacaag 7451166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 95 - 172
Target Start/End: Complemental strand, 11067397 - 11067320
Alignment:
Q  95 ttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaattt 172  Q
    ||||||||||||||||| | |||||||||||||| |||  |||||||||||| | |||| ||  ||||||||| ||||    
T  11067397 ttacaaagagatacaaatgggttacaagaaattagctttgacaagctcacaaagtacaacactaatttctacccattt 11067320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 14633885 - 14633960
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||| | ||||||||   |||| |||||||| | |||||||||||||| ||| ||||||||||||| ||||||    
T  14633885 cactatctatgagttcttacaaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaa 14633960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 34139830 - 34139905
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| ||||||||   |||| |||||| | | |||||||||||||| ||| ||||||||||||| ||||||    
T  34139830 cactatcaatgagttcttacaaaagggatacatatgggttacaagaaattagcttaaacaagctcacaaagaacaa 34139905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 136
Target Start/End: Complemental strand, 3897099 - 3897041
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaac 136  Q
    |||| |||| ||||||||||||||   ||||||||||||||||| |||||| |||||||    
T  3897099 cactttcaatgagttctttacaaaattatacaaaagagttacaaaaaattagcttcaac 3897041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 201 - 287
Target Start/End: Complemental strand, 28671935 - 28671849
Alignment:
Q  201 cttcccaagaacaaaagattcaatgatttcactcatccaaggtatatacaaaattttctcaacccgagataatctctaaccaaagac 287  Q
    |||||||||||||| ||| ||||| ||||||||||||||| | || ||||||  |||| |||||| | | || |||| |||||||||    
T  28671935 cttcccaagaacaagagactcaataatttcactcatccaatgcatttacaaatgtttcccaacccaaaagaacctctcaccaaagac 28671849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 154
Target Start/End: Original strand, 14202499 - 14202540
Alignment:
Q  113 gagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    |||||||||||||||| ||| ||||||||||||| |||||||    
T  14202499 gagttacaagaaattagcttaaacaagctcacaaagaacaaa 14202540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 365
Target Start/End: Complemental strand, 28671834 - 28671797
Alignment:
Q  328 tctctcttgaagccctacccaaaacttgaagaatgaag 365  Q
    |||||||||||||||||| |||||| ||||||||||||    
T  28671834 tctctcttgaagccctactcaaaacatgaagaatgaag 28671797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 43406063 - 43406022
Alignment:
Q  94 tttacaaagagatacaaaagagttacaagaaattaacttcaa 135  Q
    |||||||||||||||| ||| ||||||||| |||||||||||    
T  43406063 tttacaaagagatacacaagggttacaagatattaacttcaa 43406022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 19401366 - 19401318
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaat 126  Q
    |||||||||  |||| |||||||||||||| || |||||||||||||||    
T  19401366 cactatcaataagttttttacaaagagatataatagagttacaagaaat 19401318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 106 - 154
Target Start/End: Complemental strand, 24885742 - 24885694
Alignment:
Q  106 tacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    |||||| | |||||||||||||| ||| ||||||||||||| |||||||    
T  24885742 tacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaa 24885694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 76 - 175
Target Start/End: Complemental strand, 25164 - 25065
Alignment:
Q  76 ttcactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaatttccc 175  Q
    ||||||||||| |||||||||||||||||||||||||  |||||||||||||| ||||||||| ||| ||| |||||||||   ||||||||| ||||||    
T  25164 ttcactatcaatgagttctttacaaagagatacaaaaaggttacaagaaattaccttcaacaaactctcaaagaacaaaactagtttctaccattttccc 25065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 1e-21; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 9109479 - 9109540
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaag 139  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  9109479 cactatcaacgtgttctttacaaagagatacaaaagggttacaagaaattaacttcaacaag 9109540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 37 - 135
Target Start/End: Complemental strand, 41135971 - 41135872
Alignment:
Q  37 tcgaacaatgacctactctgaagaaaa-agacctatctgtttcactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaa 135  Q
    ||||||||||||||||||||| | | | ||| || |||| |||| ||||||||||||||||||||| |||||||||||  ||||||||||||||||||||    
T  41135971 tcgaacaatgacctactctgagggagagagatctctctgcttcagtatcaacgagttctttacaaatagatacaaaaggtttacaagaaattaacttcaa 41135872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 78 - 172
Target Start/End: Original strand, 196968 - 197061
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaattt 172  Q
    ||||||||| |||||||| |||||| |||||||| |||||||||||||||||||| ||||||||||||| ||||||  |  ||||||||||||||    
T  196968 cactatcaatgagttctt-acaaagggatacaaatgagttacaagaaattaacttaaacaagctcacaaagaacaaccctaatttctaccaattt 197061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 76 - 138
Target Start/End: Complemental strand, 25652197 - 25652135
Alignment:
Q  76 ttcactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaa 138  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  25652197 ttcactatcaaagagttctttacaaagagatacaagagagttacaagaaattagcttcaacaa 25652135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 78 - 172
Target Start/End: Complemental strand, 41361022 - 41360929
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaattt 172  Q
    |||||||||||||||||| ||||||||||||||| | ||||||||||||||  |||||||||||||||| ||||||| |  ||||||||| ||||    
T  41361022 cactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattagtttcaacaagctcacaaagaacaaacctaatttctacccattt 41360929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 78 - 172
Target Start/End: Original strand, 42298035 - 42298128
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaattt 172  Q
    ||||||||| |||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||  |||||  |  ||||||||||||||    
T  42298035 cactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaaaaacaaccctaatttctaccaattt 42298128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 81 - 154
Target Start/End: Complemental strand, 22079422 - 22079349
Alignment:
Q  81 tatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    |||||| |||||||||||||||||||||||||  |||||||||||||| ||| ||||||||||||| |||||||    
T  22079422 tatcaatgagttctttacaaagagatacaaaatggttacaagaaattagctttaacaagctcacaaagaacaaa 22079349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 78 - 142
Target Start/End: Complemental strand, 6808561 - 6808497
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctc 142  Q
    |||||| || ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  6808561 cactataaatgagttctttacaaagagatacaaaagagttacaagaagttagcttcaacaagctc 6808497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 28265614 - 28265688
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| | |||||||||||||| ||||||||||||||||| ||||||    
T  28265614 cactatcaaagagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaatgaacaa 28265688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 47255400 - 47255474
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| | |||||||||||||| ||||||||||||||||| ||||||    
T  47255400 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaa 47255474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 78 - 172
Target Start/End: Original strand, 8550847 - 8550940
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaattt 172  Q
    ||||||||| |||||||| |||||| |||||||| |||||||||||||||| ||| ||||||||||||| ||||||| |  ||||||||| ||||    
T  8550847 cactatcaatgagttctt-acaaagggatacaaatgagttacaagaaattagcttaaacaagctcacaaagaacaaacctaatttctacccattt 8550940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 95 - 153
Target Start/End: Complemental strand, 10925315 - 10925257
Alignment:
Q  95 ttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||    
T  10925315 ttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaa 10925257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 78 - 172
Target Start/End: Complemental strand, 11348806 - 11348713
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaattt 172  Q
    ||||||||| |||||||| | ||||||||||||| | |||||||||||||| ||||||||||||||||| ||||||  |  ||||||||||||||    
T  11348806 cactatcaatgagttctt-agaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctaccaattt 11348713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 78 - 152
Target Start/End: Original strand, 31925767 - 31925840
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaaca 152  Q
    ||||||||| |||||||| ||||||||||||||| | |||||||||||||| ||||||||||||||||| |||||    
T  31925767 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaatgaaca 31925840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 94 - 154
Target Start/End: Original strand, 928051 - 928111
Alignment:
Q  94 tttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    ||||||||||||| |||||| |||||||||||||| ||||||||||||||||| |||||||    
T  928051 tttacaaagagatccaaaagggttacaagaaattagcttcaacaagctcacaaagaacaaa 928111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 90 - 154
Target Start/End: Complemental strand, 3460793 - 3460729
Alignment:
Q  90 gttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    |||||||||||||| ||||||||| ||||||| |||||| ||||||||||||||||| |||||||    
T  3460793 gttctttacaaagatatacaaaagggttacaataaattagcttcaacaagctcacaaagaacaaa 3460729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 79 - 171
Target Start/End: Original strand, 4535541 - 4535633
Alignment:
Q  79 actatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaatt 171  Q
    |||||||| |||||||||||||||||||||||||  ||||||||||||| ||||||| |||||| | | |||||||    |||||||||||||    
T  4535541 actatcaatgagttctttacaaagagatacaaaaatgttacaagaaattgacttcaataagctctccaagaacaaacttaatttctaccaatt 4535633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 15820415 - 15820340
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    ||||||||| |||||||| | ||||||||||||| | |||||||||||||| ||||||||||||||||| |||||||    
T  15820415 cactatcaatgagttcttaa-aaagagatacaaatgtgttacaagaaattagcttcaacaagctcacaaagaacaaa 15820340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 3156973 - 3156899
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| | |||||||||||||| |||||||||| |||||| ||||||    
T  3156973 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaa 3156899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 3189438 - 3189364
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||| |||||||||||||||||| ||||||| |||||||||| |||||| ||||||    
T  3189438 cactatcaatgagttctt-acaaaaagatacaaaagagttacaggaaattagcttcaacaagttcacaaagaacaa 3189364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 3198255 - 3198181
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||| |||||||||||||||||| ||||||| |||||||||| |||||| ||||||    
T  3198255 cactatcaatgagttctt-acaaaaagatacaaaagagttacaggaaattagcttcaacaagttcacaaagaacaa 3198181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 3207094 - 3207020
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||| |||||||||||||||||| ||||||| |||||||||| |||||| ||||||    
T  3207094 cactatcaatgagttctt-acaaaaagatacaaaagagttacaggaaattagcttcaacaagttcacaaagaacaa 3207020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 13547149 - 13547223
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| | ||||||||||| || ||||||||||||||||| ||||||    
T  13547149 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaaatagcttcaacaagctcacaaagaacaa 13547223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 19754603 - 19754529
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| |||||||||||||||   |||||||||||||| ||||||||||||||||| ||||||    
T  19754603 cactatcaatgagttctt-acaaagagatacaaatcggttacaagaaattagcttcaacaagctcacaaagaacaa 19754529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 28220286 - 28220360
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| | |||||||||||||| |||||||||| |||||| ||||||    
T  28220286 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaa 28220360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 49918458 - 49918384
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| | |||||||||||||| |||||||||| |||||| ||||||    
T  49918458 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaa 49918384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 76 - 142
Target Start/End: Original strand, 1050501 - 1050567
Alignment:
Q  76 ttcactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctc 142  Q
    ||||||||||||||||| |||||||||||| ||||||  |||||||||||||| |||||| ||||||    
T  1050501 ttcactatcaacgagttatttacaaagagacacaaaaatgttacaagaaattagcttcaataagctc 1050567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 78 - 144
Target Start/End: Original strand, 2263034 - 2263100
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcac 144  Q
    |||||||||  ||||||||||||| ||||| ||||| |||||||||||||| |||||||||||||||    
T  2263034 cactatcaataagttctttacaaaaagatataaaagggttacaagaaattatcttcaacaagctcac 2263100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 7482288 - 7482365
Alignment:
Q  76 ttcactatcaacgagttctttacaaagagatacaaaa-gagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||||| |||||||| |||||||||||||||| | |||||||||||||| ||| ||||||||||||| ||||||    
T  7482288 ttcactatcaatgagttctt-acaaagagatacaaaatgggttacaagaaattagcttaaacaagctcacaaagaacaa 7482365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 78 - 152
Target Start/End: Complemental strand, 31659346 - 31659273
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaaca 152  Q
    |||||||||  ||||||| ||||||||||||||| | |||||||||||||| ||||||||||||||||| |||||    
T  31659346 cactatcaataagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaaca 31659273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 88 - 154
Target Start/End: Original strand, 37282761 - 37282827
Alignment:
Q  88 gagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    ||||||||||||||||||| |||||| ||||| | |||||| ||||||||||||||||| |||||||    
T  37282761 gagttctttacaaagagatgcaaaagggttaccataaattagcttcaacaagctcacaaggaacaaa 37282827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 37559926 - 37560003
Alignment:
Q  76 ttcactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaac-ttcaacaagctcacaacgaacaa 153  Q
    |||||||||||||||||||| ||||||||||||||| | |||||||||||||| | ||||||||| |||||| ||||||    
T  37559926 ttcactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattagctttcaacaagttcacaaagaacaa 37560003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 78 - 156
Target Start/End: Original strand, 45644414 - 45644491
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaac 156  Q
    ||||||||| |||||||| ||||||||||||||| ||||| |||||||||| |||  |||||||||||| |||||||||    
T  45644414 cactatcaatgagttctt-acaaagagatacaaatgagttgcaagaaattagctttgacaagctcacaaagaacaaaac 45644491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 37168406 - 37168331
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaa-gagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| |||||||||||||||| | |||||||||||||| ||| ||||||||||||| ||||||    
T  37168406 cactatcaatgagttctt-acaaagagatacaaaatgggttacaagaaattagcttaaacaagctcacaaagaacaa 37168331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 46065026 - 46064951
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    |||||| || |||||||| ||||||||||||| | |||||||||||||||| ||||||| ||||||||| |||||||    
T  46065026 cactatgaatgagttctt-acaaagagatacacatgagttacaagaaattagcttcaacgagctcacaaagaacaaa 46064951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 141
Target Start/End: Complemental strand, 193719 - 193657
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagct 141  Q
    ||||||||| ||||| || ||||||||||||||| |||||||||||||||| ||||||||||||    
T  193719 cactatcaatgagttatt-acaaagagatacaaatgagttacaagaaattagcttcaacaagct 193657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 834227 - 834301
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| |||||| |||||||| | |||||||||||||| ||| ||||||||||||| ||||||    
T  834227 cactatcaatgagttctt-acaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaa 834301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 81 - 172
Target Start/End: Original strand, 4552700 - 4552790
Alignment:
Q  81 tatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaattt 172  Q
    |||||| |||||||| |||||| |||||||| | |||||||||||||| ||||||||||||||||| | ||||| |  ||||||||| ||||    
T  4552700 tatcaatgagttctt-acaaagggatacaaaggggttacaagaaattagcttcaacaagctcacaaaggacaaacctaatttctacccattt 4552790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 76 - 142
Target Start/End: Original strand, 16914232 - 16914299
Alignment:
Q  76 ttcactatcaacgagttctttacaaagagatacaaaagagttacaagaaa-ttaacttcaacaagctc 142  Q
    ||||||||||| |||||||||||||||||||||||||| |||| |||||| ||| |||||||| ||||    
T  16914232 ttcactatcaatgagttctttacaaagagatacaaaagggttagaagaaacttagcttcaacaggctc 16914299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 23555325 - 23555399
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| |||||| |||||||||  ||||||||| |||||| ||||||    
T  23555325 cactatcaatgagttctt-acaaagagatacaaatgagttataagaaattagtttcaacaagttcacaaagaacaa 23555399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 137
Target Start/End: Complemental strand, 32471569 - 32471510
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaaca 137  Q
    ||||||||| |||||  ||||||||||||||||||||||| ||| |||||||||||||||    
T  32471569 cactatcaatgagtttcttacaaagagatacaaaagagttgcaataaattaacttcaaca 32471510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 44455268 - 44455194
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||| ||||||||| ||||||||||||||||  ||||||||| |||||| ||||||    
T  44455268 cactatcaatgagttctt-acaaaaagatacaaatgagttacaagaaattagtttcaacaagttcacaaagaacaa 44455194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 94 - 172
Target Start/End: Complemental strand, 47115265 - 47115186
Alignment:
Q  94 tttacaaagagatacaaaa-gagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaattt 172  Q
    ||||||||||||||||||| | |||||||||||||| ||| ||||||||||||| ||||||  |  ||||||||||||||    
T  47115265 tttacaaagagatacaaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaccctaatttctaccaattt 47115186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 50169270 - 50169344
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||| ||| ||||||||||||||| |||||||||||||||| |||  |||||||||||| ||||||    
T  50169270 cactatcaatgagtactt-acaaagagatacaaatgagttacaagaaattagctttgacaagctcacaaagaacaa 50169344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 78 - 144
Target Start/End: Complemental strand, 16455729 - 16455664
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcac 144  Q
    ||||||||| |||||||| ||| ||||||||||| | |||||||||||||| |||||||||||||||    
T  16455729 cactatcaatgagttctt-acacagagatacaaatgggttacaagaaattagcttcaacaagctcac 16455664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 78 - 151
Target Start/End: Original strand, 13138036 - 13138108
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaac 151  Q
    ||||||||| | |||||| |||||||||| |||| | |||||||||||||| ||||||||||||||||| ||||    
T  13138036 cactatcaatgtgttctt-acaaagagatgcaaatgggttacaagaaattagcttcaacaagctcacaaagaac 13138108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 80 - 153
Target Start/End: Complemental strand, 19752792 - 19752720
Alignment:
Q  80 ctatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||| |||||||| |||||||||||||||   |||||||||||||| ||||||||||||| ||| ||||||    
T  19752792 ctatcaatgagttctt-acaaagagatacaaatcggttacaagaaattagcttcaacaagctcgcaaagaacaa 19752720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 78 - 139
Target Start/End: Original strand, 28223481 - 28223541
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaag 139  Q
    ||||||||| |||||||| ||||||||||||||| | |||||||||||||| ||||||||||    
T  28223481 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaag 28223541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 81 - 154
Target Start/End: Original strand, 40122261 - 40122333
Alignment:
Q  81 tatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    |||||| |||||||| |||||| |||||||| |||||| ||||||||| ||| ||||||||||||| |||||||    
T  40122261 tatcaaagagttctt-acaaagtgatacaaatgagttataagaaattagcttaaacaagctcacaaagaacaaa 40122333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 37033132 - 37033207
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagag-ttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| |||||||||| |||||  | ||||||||||||| ||||||||||||||||| ||||||    
T  37033132 cactatcaatgagttctt-acaaagagatgcaaaatggattacaagaaattagcttcaacaagctcacaaagaacaa 37033207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 50167235 - 50167302
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaa 146  Q
    ||||||||| ||||| |||||||||||||||||| | |||||||||||||| |||  ||||||||||||    
T  50167235 cactatcaatgagtt-tttacaaagagatacaaatgggttacaagaaattagctttgacaagctcacaa 50167302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 71 - 174
Target Start/End: Original strand, 12318575 - 12318678
Alignment:
Q  71 tctgtttcactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaat 170  Q
    |||| |||| |||||| |||||||| |  |||| ||||||||  |||||||||||||| ||||||||||||| | | ||||||| |  ||||||||| ||    
T  12318575 tctgcttcagtatcaatgagttcttaaagaagacatacaaaatggttacaagaaattagcttcaacaagctctccatgaacaaacctaatttctacccat 12318674  T
Q  171 ttcc 174  Q
    ||||    
T  12318675 ttcc 12318678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 13316412 - 13316486
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| ||||||||  |||||||||||||||| |||||||||||||| |||  ||||| |||||| ||||||    
T  13316412 cactatcaatgagttcttc-caaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa 13316486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 13549060 - 13549134
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| | |||||| |||||||  || ||||||||||||| ||||||    
T  13549060 cactatcaatgagttctt-acaaagagatacaaatgggttacatgaaattaggtttaacaagctcacaaagaacaa 13549134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 20762780 - 20762706
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| || |||||||||||||| |||||||||||||| |||  ||||| |||||| ||||||    
T  20762780 cactatcaatgagttctt-acgaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa 20762706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 82 - 153
Target Start/End: Complemental strand, 29136351 - 29136281
Alignment:
Q  82 atcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||| |||||||| ||||||| ||||||| | ||| |||||||||| ||||||||||||||||| ||||||    
T  29136351 atcaatgagttctt-acaaagaaatacaaatgggttccaagaaattagcttcaacaagctcacaaagaacaa 29136281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 76 - 140
Target Start/End: Original strand, 1485827 - 1485892
Alignment:
Q  76 ttcactatcaacgagtt-ctttacaaagagatacaaaagagttacaagaaattaacttcaacaagc 140  Q
    ||||||||||| ||||| ||||| ||| ||||||||||| ||||||||||||||  ||||||||||    
T  1485827 ttcactatcaaagagtttctttataaatagatacaaaagggttacaagaaattatattcaacaagc 1485892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 78 - 135
Target Start/End: Complemental strand, 1833630 - 1833574
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaa 135  Q
    ||||||||| |||||||| ||||||||||||||| |||||||||||| ||| ||||||    
T  1833630 cactatcaatgagttctt-acaaagagatacaaatgagttacaagaatttagcttcaa 1833574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 37503617 - 37503688
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||    |||||||||||||| |||||||||| |||||| ||||||    
T  37503617 cactatcaatgagttctt-acaaagagatacaag---gttacaagaaattagcttcaacaagttcacaaagaacaa 37503688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 13659396 - 13659463
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaa 146  Q
    ||||||||| |||||||| ||||||||||| ||| | || ||||||||||| |||||||||||| ||||    
T  13659396 cactatcaatgagttctt-acaaagagatataaatgggtaacaagaaattagcttcaacaagcttacaa 13659463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 28317685 - 28317740
Alignment:
Q  80 ctatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaac 136  Q
    |||||||||||||||||| ||| ||||| |||  |||||||||||||||||||||||    
T  28317685 ctatcaacgagttctttataaaaagatataaat-agttacaagaaattaacttcaac 28317740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 81 - 153
Target Start/End: Original strand, 30476509 - 30476580
Alignment:
Q  81 tatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    |||||| |||||||| ||||||||||||||| | ||||||| |||||| |||||||||| ||| || ||||||    
T  30476509 tatcaatgagttctt-acaaagagatacaaatgggttacaataaattatcttcaacaagttcataaagaacaa 30476580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 82 - 153
Target Start/End: Complemental strand, 34603681 - 34603610
Alignment:
Q  82 atcaacgagttctttacaaagagatacaaaa-gagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||| |||||||| ||||||||||| |||| | |||||||||||||| ||| ||||||||||||| ||||||    
T  34603681 atcaatgagttctt-acaaagagataaaaaatgggttacaagaaattagcttaaacaagctcacaaagaacaa 34603610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 79 - 137
Target Start/End: Complemental strand, 5460013 - 5459956
Alignment:
Q  79 actatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaaca 137  Q
    |||||||| |||||||||||||||| ||| ||||  |||||||||||||| ||||||||    
T  5460013 actatcaatgagttctttacaaagaaatataaaa-tgttacaagaaattagcttcaaca 5459956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 106 - 172
Target Start/End: Complemental strand, 36683771 - 36683705
Alignment:
Q  106 tacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaattt 172  Q
    |||||| |||||||||||||||| ||||||||| ||||||| ||| ||| |  ||||||||| ||||    
T  36683771 tacaaatgagttacaagaaattagcttcaacaaactcacaaagaataaacctaatttctacctattt 36683705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 37879007 - 37879045
Alignment:
Q  115 gttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    |||||||||||||| ||||||||||||||||| ||||||    
T  37879007 gttacaagaaattagcttcaacaagctcacaaagaacaa 37879045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 128
Target Start/End: Original strand, 38746780 - 38746828
Alignment:
Q  82 atcaacgagttctttacaaagag--atacaaaagagttacaagaaatta 128  Q
    ||||| |||||||||||||||||  |||||||| |||||||||||||||    
T  38746780 atcaaagagttctttacaaagagatatacaaaaaagttacaagaaatta 38746828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 159
Target Start/End: Original strand, 44650238 - 44650303
Alignment:
Q  94 tttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacata 159  Q
    |||||||||||||| |||||| |||||| |||||| | | ||||| ||||||| ||||||| ||||    
T  44650238 tttacaaagagatataaaagatttacaataaattagcgttaacaaactcacaaagaacaaaccata 44650303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 4e-21; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 13695750 - 13695826
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    |||||| || |||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||| |||||||    
T  13695750 cactattaatgagttctttacaaagagatacaaaagggttacaagaaattagctttaacaagctcacaaagaacaaa 13695826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 73 - 142
Target Start/End: Complemental strand, 35616283 - 35616214
Alignment:
Q  73 tgtttcactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctc 142  Q
    |||||||||||||| |||||||||||||||| ||||||||| |||||||||||||||||| ||| |||||    
T  35616283 tgtttcactatcaatgagttctttacaaagaaatacaaaagggttacaagaaattaacttaaacgagctc 35616214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 13239859 - 13239792
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaa 146  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  13239859 cactatcaatgagttctt-acaaagagatacaaaagagttacaagaaattagcttcaacaagttcacaa 13239792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 42309995 - 42310062
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaa 146  Q
    |||||||||  ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  42309995 cactatcaataagttctt-acaaagagatacaaaagagttacaagaaattagcttcaacaagctcacaa 42310062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 28278424 - 28278350
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| ||||| |||||||||||||||||| | |||||||||||||| ||||||||||||||||| ||||||    
T  28278424 cactatcaatgagtt-tttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaa 28278350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 71 - 154
Target Start/End: Complemental strand, 30802944 - 30802861
Alignment:
Q  71 tctgtttcactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    |||| |||| ||||||||||||||||||||| |||||||||||  |||||| ||||||  |||||||||||||||| |||||||    
T  30802944 tctgcttcattatcaacgagttctttacaaatagatacaaaaggattacaataaattagtttcaacaagctcacaaagaacaaa 30802861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 37439249 - 37439175
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||  ||||| |||||| ||||||    
T  37439249 cactatcaatgagttctt-acaaagagatacaaaagagttacaagaaattaactttgacaagttcacaaagaacaa 37439175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 40147369 - 40147295
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||| | ||||||    
T  40147369 cactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacgaagaacaa 40147295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 81 - 167
Target Start/End: Complemental strand, 316868 - 316782
Alignment:
Q  81 tatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctacc 167  Q
    |||||| ||||||||||||||||||||||||||  ||||||||||||| ||||||||||||| | | ||||||| |  |||||||||    
T  316868 tatcaatgagttctttacaaagagatacaaaaggattacaagaaattagcttcaacaagctctccaagaacaaacctaatttctacc 316782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 76 - 138
Target Start/End: Complemental strand, 32609646 - 32609584
Alignment:
Q  76 ttcactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaa 138  Q
    |||| ||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  32609646 ttcaatatcaataagttctttacaaagaaatacaaaagagttacaagaaattaacttcaacaa 32609584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 78 - 172
Target Start/End: Complemental strand, 33831788 - 33831695
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaattt 172  Q
    ||||||||| |||||||| ||||||||||||||| | |||||||||||||| ||| ||||||||||||| ||||||| |  ||||||||| ||||    
T  33831788 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaacctaatttctacccattt 33831695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 213573 - 213499
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| | |||||||||||||| ||| ||||||||||||| ||||||    
T  213573 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagctttaacaagctcacaaagaacaa 213499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 79 - 146
Target Start/End: Complemental strand, 538132 - 538066
Alignment:
Q  79 actatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaa 146  Q
    |||||||| |||||||| ||||||||||||||| | |||||||||||||| |||||||||||||||||    
T  538132 actatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaa 538066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 13488311 - 13488237
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| | |||||||||||||| |||||||||| |||||| ||||||    
T  13488311 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaa 13488237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 39468609 - 39468683
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| | |||||||||||||| |||||||||| |||||| ||||||    
T  39468609 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaa 39468683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 80 - 153
Target Start/End: Complemental strand, 38747111 - 38747039
Alignment:
Q  80 ctatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||| ||||| ||| |||||||||||||| | |||||||||||||| ||||||||||||||||| ||||||    
T  38747111 ctatcaatgagtt-tttccaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaa 38747039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 78 - 146
Target Start/End: Complemental strand, 533877 - 533810
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaa 146  Q
    ||||||||| |||||||| ||||||||||||||| | ||||||| |||||| |||||||||||||||||    
T  533877 cactatcaatgagttctt-acaaagagatacaaatgggttacaaaaaattagcttcaacaagctcacaa 533810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 76 - 172
Target Start/End: Original strand, 3075716 - 3075811
Alignment:
Q  76 ttcactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaattt 172  Q
    |||||||||||||| ||||| ||||| ||||||||| | ||||||||||||||  |||| ||||||||||| ||||||| |  ||||||||| ||||    
T  3075716 ttcactatcaacgaattctt-acaaaaagatacaaatgggttacaagaaattagattcagcaagctcacaaagaacaaacctaatttctacctattt 3075811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 9049402 - 9049469
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaa 146  Q
    |||| |||| |||||||| ||||||||||||||||  |||||||||||||| |||||||||||||||||    
T  9049402 cactgtcaatgagttctt-acaaagagatacaaaatggttacaagaaattagcttcaacaagctcacaa 9049469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 78 - 154
Target Start/End: Complemental strand, 16452188 - 16452113
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    |||||| || |||||||| ||||||||||||||| | |||||||||||||| |||||||||||||| || |||||||    
T  16452188 cactatgaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcagaaagaacaaa 16452113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 42428490 - 42428557
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaa 146  Q
    ||||||||| |||||||| ||||||||||||||| | |||||||||||||| |||||||||| ||||||    
T  42428490 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaa 42428557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 88 - 167
Target Start/End: Complemental strand, 3326012 - 3325933
Alignment:
Q  88 gagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctacc 167  Q
    |||||||||||||||||||||| ||  |||||||||||||| |||||||||||||   | |||||||||  |||||||||    
T  3326012 gagttctttacaaagagatacacaatggttacaagaaattagcttcaacaagctcttcaagaacaaaactaatttctacc 3325933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 95 - 154
Target Start/End: Original strand, 16641013 - 16641072
Alignment:
Q  95 ttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    ||||||||||||||||||||||||  |||||| | ||||||||||||||||| |||||||    
T  16641013 ttacaaagagatacaaaagagttatcagaaatcagcttcaacaagctcacaaagaacaaa 16641072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 25412868 - 25412794
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||||| |||||||||||||| |||  ||||| |||||| ||||||    
T  25412868 cactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa 25412794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 79 - 142
Target Start/End: Original strand, 33906091 - 33906154
Alignment:
Q  79 actatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctc 142  Q
    |||||||| ||||||||||||||||||||||||||  ||||||||| ||| |||| ||||||||    
T  33906091 actatcaatgagttctttacaaagagatacaaaaggattacaagaagttagcttcgacaagctc 33906154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 154
Target Start/End: Original strand, 8566006 - 8566081
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    ||||||||| |||||||| ||| || |||||||| | |||||||||||||| ||| ||||||||||||| |||||||    
T  8566006 cactatcaatgagttctt-acagagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaa 8566081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 138
Target Start/End: Original strand, 10054876 - 10054935
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaa 138  Q
    ||||||||| |||||| ||||||||||||||||||| |||| ||||||||| |||||||||    
T  10054876 cactatcaatgagttcattacaaagagatacaaaag-gttataagaaattagcttcaacaa 10054935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 95 - 151
Target Start/End: Original strand, 30683000 - 30683056
Alignment:
Q  95 ttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaac 151  Q
    ||||||||| ||||||||| |||||||||||||| |||||||||| |||||| ||||    
T  30683000 ttacaaagaaatacaaaagggttacaagaaattagcttcaacaagttcacaaagaac 30683056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 36074103 - 36074176
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| ||||||||  ||||||||||||||||||||||||||||||| |||  ||||| || ||| ||||||    
T  36074103 cactatcaatgagttctt--caaagagatacaaaagagttacaagaaattagctttgacaagttcgcaaagaacaa 36074176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 95 - 143
Target Start/End: Complemental strand, 42926959 - 42926911
Alignment:
Q  95 ttacaaagagatacaaaagagttacaagaaattaacttcaacaagctca 143  Q
    ||||||||||||||||| |||||||||||||||| ||||||||| ||||    
T  42926959 ttacaaagagatacaaatgagttacaagaaattagcttcaacaatctca 42926911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 145
Target Start/End: Complemental strand, 5058153 - 5058087
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcaca 145  Q
    ||||||||| |||||||| ||||||||||||||| | | ||||||||| || ||||||||||||||||    
T  5058153 cactatcaatgagttctt-acaaagagatacaaatgggatacaagaaaatagcttcaacaagctcaca 5058087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 79 - 138
Target Start/End: Complemental strand, 8445823 - 8445764
Alignment:
Q  79 actatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaa 138  Q
    ||||||||  ||||||||| ||||| ||||||||| |||||||||||||| |||||||||    
T  8445823 actatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttcaacaa 8445764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 9789284 - 9789359
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| ||||||||   ||||||||||||||||||||||||||||||  ||  ||||| |||||| ||||||    
T  9789284 cactatcaatgagttcttacaaaagagatacaaaagagttacaagaaattagatttgacaagttcacaaggaacaa 9789359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 16409583 - 16409508
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| ||||||||   ||||||||||||||||||||||||||||||  ||  ||||| |||||| ||||||    
T  16409583 cactatcaatgagttcttacaaaagagatacaaaagagttacaagaaattagatttgacaagttcacaaagaacaa 16409508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 18441708 - 18441783
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| ||||||||   ||||||||||||||||||||||||||||||  ||  ||||| |||||| ||||||    
T  18441708 cactatcaatgagttcttacaaaagagatacaaaagagttacaagaaattagatttgacaagttcacaaggaacaa 18441783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 26177990 - 26177915
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| ||||||||   ||||||||||||||||||||||||||||||  ||  ||||| |||||| ||||||    
T  26177990 cactatcaatgagttcttacaaaagagatacaaaagagttacaagaaattagatttgacaagttcacaaagaacaa 26177915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 32636932 - 32636858
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| | |||||||||||||| |||  ||||| |||||| ||||||    
T  32636932 cactatcaaagagttctt-acaaagagatacaaatgggttacaagaaattagctttgacaagttcacaaagaacaa 32636858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 42426295 - 42426369
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| | ||| |||||||||| |||||||||  |||||| ||||||    
T  42426295 cactatcaatgagttctt-acaaagagatacaaatgggttgcaagaaattagcttcaacaatttcacaaagaacaa 42426369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 142
Target Start/End: Complemental strand, 32579335 - 32579269
Alignment:
Q  76 ttcactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctc 142  Q
    |||||| |||| ||||| |||||||||| ||||| ||||||||||||||||||  ||||| ||||||    
T  32579335 ttcactttcaatgagttatttacaaagacatacataagagttacaagaaattagtttcaataagctc 32579269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 138
Target Start/End: Original strand, 32583340 - 32583402
Alignment:
Q  76 ttcactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaa 138  Q
    ||||||||||| |||||||||||||| ||||||||||||| ||||   ||||| |||||||||    
T  32583340 ttcactatcaatgagttctttacaaaaagatacaaaagagatacacataattagcttcaacaa 32583402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 13343168 - 13343095
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| ||||||||  ||||||||||||||||  ||||||||||||| |||  ||||| |||||| ||||||    
T  13343168 cactatcaatgagttctt--caaagagatacaaaaggattacaagaaattagctttgacaagttcacaaagaacaa 13343095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 138
Target Start/End: Original strand, 28750715 - 28750774
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaa 138  Q
    ||||||||| |||||||| ||||| ||||||||| | |||||| |||||||||||||||||    
T  28750715 cactatcaatgagttctt-acaaaaagatacaaatgggttacaggaaattaacttcaacaa 28750774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 76 - 128
Target Start/End: Complemental strand, 30793247 - 30793195
Alignment:
Q  76 ttcactatcaacgagttctttacaaagagatacaaaagagttacaagaaatta 128  Q
    |||||||||||  ||||||||||||||||||||||||  ||||||| ||||||    
T  30793247 ttcactatcaattagttctttacaaagagatacaaaatggttacaataaatta 30793195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 81 - 153
Target Start/End: Complemental strand, 31183076 - 31183006
Alignment:
Q  81 tatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    |||||| |||||||| |||||| |||||||| | |||||||||||||||||| ||||| ||||||| ||||||    
T  31183076 tatcaatgagttctt-acaaagggatacaaatg-gttacaagaaattaacttaaacaaactcacaaagaacaa 31183006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 95 - 154
Target Start/End: Original strand, 5887492 - 5887551
Alignment:
Q  95 ttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaa 154  Q
    |||||||| |||||||| | ||| |||||||||| ||| ||||||||||||| |||||||    
T  5887492 ttacaaagtgatacaaatgggttgcaagaaattagcttaaacaagctcacaaagaacaaa 5887551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 167
Target Start/End: Original strand, 10700706 - 10700796
Alignment:
Q  76 ttcactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctacc 167  Q
    ||||||||||| |||||||||  ||||||||||||||  |||| ||| ||||| ||||||||||||| | | ||||||| |  |||||||||    
T  10700706 ttcactatcaatgagttctttttaaagagatacaaaaatgttataag-aattagcttcaacaagctctctaagaacaaacctaatttctacc 10700796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 30182696 - 30182622
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| ||||||||  |||||||||| ||||| |||||||||||||| |||  ||||| |||||| ||||||    
T  30182696 cactatcaatgagttcttc-caaagagatagaaaagggttacaagaaattagctttgacaagttcacaaagaacaa 30182622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 22097971 - 22097913
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaa 138  Q
    ||||||||| ||||| |||||||| ||||||||  | |||| |||||||||||||||||||    
T  22097971 cactatcaatgagttttttacaaatagatacaa--gggttataagaaattaacttcaacaa 22097913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 95 - 138
Target Start/End: Original strand, 2149233 - 2149277
Alignment:
Q  95 ttacaaagagatacaaaagag-ttacaagaaattaacttcaacaa 138  Q
    ||||||| ||||| ||||||| |||||||||||||||||||||||    
T  2149233 ttacaaaaagatataaaagaggttacaagaaattaacttcaacaa 2149277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 76 - 112
Target Start/End: Complemental strand, 5007842 - 5007806
Alignment:
Q  76 ttcactatcaacgagttctttacaaagagatacaaaa 112  Q
    ||||||||||| |||||||||||||||||||| ||||    
T  5007842 ttcactatcaatgagttctttacaaagagatagaaaa 5007806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 78 - 172
Target Start/End: Original strand, 18064 - 18156
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaaaacatatttctaccaattt 172  Q
    ||||||||| |||||  ||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||  |  ||||||||||||||    
T  18064 cactatcaatgagtt--ttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaatgaacaaccctaatttctaccaattt 18156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 51; Significance: 6e-20; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 76 - 142
Target Start/End: Original strand, 490378 - 490444
Alignment:
Q  76 ttcactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctc 142  Q
    ||||||||||| |||| ||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  490378 ttcactatcaatgagtactttacaaagatatacaaaagagttacaagaaattagcttcaacaagctc 490444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 434641 - 434567
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||||| |||||||||||||| |||  ||||| |||||| ||||||    
T  434641 cactatcaatgagttctt-acaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa 434567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 7435 - 7361
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| | |||||||||||||| ||||||||||||||||| ||||||    
T  7435 cactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaa 7361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 78 - 142
Target Start/End: Original strand, 27502 - 27566
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctc 142  Q
    |||||||||  |||| |||||||||||||||||| |||||||||||||||| |||||||||||||    
T  27502 cactatcaataagttatttacaaagagatacaaatgagttacaagaaattagcttcaacaagctc 27566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 11665 - 11591
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||| |||||||||||||||| |||  ||||| |||||| ||||||    
T  11665 cactatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagctttgacaagttcacaaagaacaa 11591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 114710 - 114636
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| |||||||| ||||||||||||||||| |||||||||||||| |||  ||||| |||||| ||||||    
T  114710 cactatcaatgagttctt-acaaagagatacaaaagcgttacaagaaattagctttgacaagttcacaaagaacaa 114636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 81 - 146
Target Start/End: Original strand, 20478 - 20542
Alignment:
Q  81 tatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaa 146  Q
    |||||| |||||||| ||||||||||||||| | |||||||||||||| |||||||||| ||||||    
T  20478 tatcaaagagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaa 20542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 76 - 153
Target Start/End: Original strand, 80341 - 80417
Alignment:
Q  76 ttcactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| | |||||||| ||||| ||||||||| | ||| |||||||||| ||||||||||||||||| ||||||    
T  80341 ttcactatctatgagttctt-acaaaaagatacaaatgggttgcaagaaattagcttcaacaagctcacaaagaacaa 80417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 78 - 153
Target Start/End: Original strand, 11221 - 11296
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||||||||||||   ||||||||||||||| ||||||||||||||  ||  ||||| |||||| ||||||    
T  11221 cactatcaacgagttcttacaaaagagatacaaaagggttacaagaaattagattttacaagttcacaaagaacaa 11296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 128
Target Start/End: Original strand, 8795 - 8845
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaatta 128  Q
    ||||||||||||||||||   ||||||||||||||| ||||||||||||||    
T  8795 cactatcaacgagttcttacaaaagagatacaaaagggttacaagaaatta 8845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 153
Target Start/End: Complemental strand, 1023 - 950
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaacgaacaa 153  Q
    ||||||||| ||||| ||  |||||||||||||||| |||||||||||||| |||  ||||| |||||| ||||||    
T  1023 cactatcaatgagttgtt--caaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa 950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 78 - 146
Target Start/End: Original strand, 149157 - 149224
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaacaagctcacaa 146  Q
    ||||||||| |||||||| ||||||||||| ||| | || ||||||||||| |||||||||||| ||||    
T  149157 cactatcaatgagttctt-acaaagagatataaatgggtaacaagaaattagcttcaacaagcttacaa 149224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 78 - 128
Target Start/End: Complemental strand, 10597 - 10548
Alignment:
Q  78 cactatcaacgagttctttacaaagagatacaaaagagttacaagaaatta 128  Q
    |||||||||||||||||| ||||||||||||||||  ||||||| ||||||    
T  10597 cactatcaacgagttctt-acaaagagatacaaaatggttacaataaatta 10548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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