View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10162_high_17 (Length: 252)
Name: NF10162_high_17
Description: NF10162
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10162_high_17 |
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Alignment Details
Target: chr8 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 18 - 239
Target Start/End: Complemental strand, 16865840 - 16865619
Alignment:
| Q |
18 |
atatcactgtttagatatattatgttgagatgttttagcaagtaatatagaaatgtgtcaccaaggttagatggatttgattgaatcaagtcaaaatctt |
117 |
Q |
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| T |
16865840 |
atatcactgtttagatatattatgttgagatgttttagcaagtaatatacaaatgtgtcaccaaggttagatggatttgattgaatcaagtcaaaatctt |
16865741 |
T |
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| Q |
118 |
ttgcattcatgcaatcggcacatcgaggacttgagtcgatatgaaatggtgcaagattttgatttacgttttaaatctaaaatatcgagattgaaatcta |
217 |
Q |
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| T |
16865740 |
ttgcattcatgcaatcggcacatcgaggacttgagtcgatatgaaatggtgcaagattttgatttacgttttaaatctaaaatatcgagattgaaatcta |
16865641 |
T |
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| Q |
218 |
gagatgtgatcatctttgccta |
239 |
Q |
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| T |
16865640 |
gacctgtgatcatctttgccta |
16865619 |
T |
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