View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10162_low_16 (Length: 323)
Name: NF10162_low_16
Description: NF10162
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10162_low_16 |
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Alignment Details
Target: chr7 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 1 - 309
Target Start/End: Original strand, 45641204 - 45641512
Alignment:
| Q |
1 |
gtgattattcaaggtgagggtcataatagtactactactcgaaatggatttggttgcaagttttgtttttcgcgtccaaatgtattggaaaaccctaatg |
100 |
Q |
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| T |
45641204 |
gtgattattcaaggtgagggtcataatagtactactactcgaaatggatttggttgcaagttttgtttttcgcgtccaaatgtattggaaaaccctaatg |
45641303 |
T |
|
| Q |
101 |
ggtcaactggtagtgaccctaatgatcctaaatttactcattctatgttgaagagtttattagagaagaatgatttttgttccaaagaatgcaatccaca |
200 |
Q |
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| T |
45641304 |
ggtcaactagtagtgaccctaatgatcctaaatttactcattctatgttgaagagtttattagagaagaatgatttttgttccaaagaatgcaatccaca |
45641403 |
T |
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| Q |
201 |
tattgaatcattgattgaatgattgattagtaatgtttggatatccattattgattttattttgttgtgttcagatggaatttgtctgtattgtggggtg |
300 |
Q |
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| T |
45641404 |
tattgaatcattgattgaatgattgattagtaatgtttggatatccattattgattttattttgttgtgttcagatggaatttgtctgtattgttgggtg |
45641503 |
T |
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| Q |
301 |
tttcttctg |
309 |
Q |
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| T |
45641504 |
tttgttctg |
45641512 |
T |
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