View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10163A_low_160 (Length: 239)
Name: NF10163A_low_160
Description: NF10163A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10163A_low_160 |
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Alignment Details
Target: chr2 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 31 - 217
Target Start/End: Complemental strand, 3742008 - 3741822
Alignment:
| Q |
31 |
caaaacacaaataataaagaaaactcctacactaaatcctgcaacaaaccctttggacttaaaaattgaatcatttggaagaacaaaagaaggtaatcca |
130 |
Q |
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| T |
3742008 |
caaaacacaaataataaagaaaactcctacactaaatcctgcaacaaaccctttggacttaaaaattgaatcatttggaagaacaaaagaaggtaatcca |
3741909 |
T |
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| Q |
131 |
ctagtaacaagttcatcactcaatgaaaaatttgcattgctaaaactccaagctaaaatcttgtgactttcaactaattgtccagtt |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3741908 |
ctagtaacaagttcatcactcaatgaaaaatttgcattgctaaaactccaagctaaaatcttgtgactttcaactaattgtccagtt |
3741822 |
T |
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