View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10163A_low_196 (Length: 227)
Name: NF10163A_low_196
Description: NF10163A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10163A_low_196 |
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Alignment Details
Target: chr7 (Bit Score: 173; Significance: 4e-93; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 20 - 205
Target Start/End: Complemental strand, 23188482 - 23188295
Alignment:
| Q |
20 |
agatgacacaatctgctatacattgtttgtgcacgaagcacctcatagaaccgagaaaagcacaacgcagaaacaagagtttgacaatttttcaaaatga |
119 |
Q |
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| T |
23188482 |
agatgacacaatctgctatacattgtttgtgcacgaagcacctcatagaaccgagaaaagcacaacgcagaaacaagagtttgacaatttttcaaaatga |
23188383 |
T |
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| Q |
120 |
attttgttaatat--atatttgatgctatgaccttttgcaatttgtatcagctacgaaactaaatttggttttctttttgaattttat |
205 |
Q |
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| T |
23188382 |
attttgttaatatatatatttgatgctatgaccttttgcaatttgcatcagctacgaaactaaatttggttttctttttgaattttat |
23188295 |
T |
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