View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10163A_low_214 (Length: 221)
Name: NF10163A_low_214
Description: NF10163A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10163A_low_214 |
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Alignment Details
Target: chr8 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 20 - 200
Target Start/End: Original strand, 27315602 - 27315782
Alignment:
| Q |
20 |
caaaacacagctatgaatcatctccccttcatgaaaccttctcttactactacaccccctaagcaaataacaaaaagtaaccccatttgcttctacacct |
119 |
Q |
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| T |
27315602 |
caaaacacagctatgaatcatctccccttcatgaaaccttctcttactactacaccccctaagcaaataacaaaaagtaaccccatttgcttctacacct |
27315701 |
T |
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| Q |
120 |
tcaaaacacatcctagcgtaaaatccaagcaactcttcaacttccacacaacccatttcacaaaacccacgaaacatcaca |
200 |
Q |
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| T |
27315702 |
tcaaaacacatcctagcgtaaaatccaagcaactcttcaacttccacacaacccatttcacaaaacccacgaaacatcaca |
27315782 |
T |
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